pycom15g24410

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0014176
Physical Location & Seq
Reverse (-)
18586723 .. 18587991
1269 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 780 bp
ATGAGGAGCATGGCAAGCTCAGCTCCTCAACGCGGTATAGCTGCCATCGTGGGCGTAGGGCCAAGGCTCGGCCGCTCCATAGCCCGAAAGTTCGCCCATGAAGGTTACACCGTCGCTATTCTCGCCCGCAATCTCGGGAGGCTCTCCAAATTCGCGGACGAGATTGCGAGGGAAGAGAAGGCGCAGGTTTTCGCCATTAGAATAGACTGCTCCGAGTCTAGAAGCGTTAGGGAGGCATTTGAAGGGGTTTTGTCTTTGGGTTTTGTAGAGGTGCTGGTCTACAATGCGTACCAGCAGCCGCCCAATTGGCACCCCACCAACTTCACCGACATCCGCCTCGACTCGTTTGAGAAGTCCCTCGCCGTTTCTTCTGTCGGAGCTTTTCACTGTGCTCAACAGGTACTTCCGGCAATGGTGGAAAGAGGAAGGGGAACGATCTTGTTTACAGGATGTTCAGGTTCACTCAAGGGGATTGCTGGCTACTCTGAACTATGTTGTGGAAAATTTGCACTGAGAGCACTATCACAATGCTTGTCAATGGAATTTCAACCGCATGGGATACACATAGCGCATGTGATTATTGACGGTGTGATTGGCCCATCTGAAGGAAGCCAATCATCATCAAGTACTTCGCAGAGGATGACGATGACGTTAGGGGTTGACGGAGTAATGGATCCCGACGTGGTGGCTCAAACCTACTGGCAATTGCACGTCCAAGACCGGAGTGCTTGGACCCAAGAAATCGACCTTCGTCCATCTAACCCCCCCAGATTCTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
adh_short

Protein Analysis

260

Amino Acids

28.25

Weight (kDa)

7.64

Isoelectric Point (pI)

36.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 13 - 193 2.6e-30 short chain dehydrogenase
adh_short_C2 PF13561 23 - 240 1.4e-23 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014176)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50560
fragaria_vesca FvH4_1g15680
malus_domestica MD02G1168700.v1.1
prunus_persica Prupe.7G136500_v2.0.a1 Prupe.7G136500_v2.0.a1
pyrus_communis pycom02g13560 pycom15g24410
rosa_chinensis RchiOBHm_Chr2g0104991
rosa_laevigata RLG00000017387
rosa_multiflora Rmu_sc0000641.1_g000031
rosa_roxburghii Rroxscaffold_2G00138600
rosa_rugosa Rorug02G0124800
rosa_samantha Rh2AG175200 Rh2BG183100 Rh2CG179800 Rh2DG181600
rosa_wichuraiana Rw2G013770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 175
AccB1I GGYRCC 1 cut(s) 309
AccBSI CCGCTC 1 cut(s) 75
AccI GTMKAC 1 cut(s) 279
AccII CGCG 2 cut(s) 33, 155
AciI CCGC 7 cut(s) 33, 73, 127, 155, 299, 334, 551
AclWI GGATC 2 cut(s) 668, 681
AcoI YGGCCR 1 cut(s) 70
AcsI RAATTY 3 cut(s) 149, 503, 542
AcuI CTGAAG 1 cut(s) 624
AfaI GTAC 3 cut(s) 290, 402, 628
AfiI CCNNNNNNNGG 3 cut(s) 32, 68, 605
AgsI TTSAA 2 cut(s) 242, 548
AjiI CACGTC 2 cut(s) 682, 712
AluBI AGCT 4 cut(s) 18, 23, 41, 380
AluI AGCT 4 cut(s) 18, 23, 41, 380
Alw21I GWGCWC 2 cut(s) 394, 520
AlwI GGATC 2 cut(s) 668, 681
AlwNI CAGNNNCTG 1 cut(s) 774
Ama87I CYCGRG 1 cut(s) 134
AoxI GGCC 3 cut(s) 59, 70, 595
ApeKI GCWGC 2 cut(s) 41, 295
ApoI RAATTY 3 cut(s) 149, 503, 542
AspLEI GCGC 2 cut(s) 184, 571
AspS9I GGNCC 3 cut(s) 59, 596, 732
AsuHPI GGTGA 1 cut(s) 316
AvaI CYCGRG 1 cut(s) 134
AvaII GGWCC 1 cut(s) 732
BamHI GGATCC 1 cut(s) 673
BanI GGYRCC 1 cut(s) 309
Bbv12I GWGCWC 2 cut(s) 394, 520
BbvI GCAGC 2 cut(s) 28, 307
BccI CCATC 3 cut(s) 53, 607, 763
BceAI ACGGC 1 cut(s) 347
BciVI GTATCC 1 cut(s) 552
BfaI CTAG 1 cut(s) 219
BfuAI ACCTGC 1 cut(s) 175
BfuI GTATCC 1 cut(s) 552
BglI GCCNNNNNGGC 1 cut(s) 307
BisI GCNGC 4 cut(s) 42, 73, 296, 299
BlpI GCTNAGC 1 cut(s) 19
BlsI GCNGC 4 cut(s) 43, 74, 297, 300
BmcAI AGTACT 1 cut(s) 628
Bme18I GGWCC 1 cut(s) 732
BmeT110I CYCGRG 1 cut(s) 134
BmgBI CACGTC 2 cut(s) 682, 712
BmgT120I GGNCC 3 cut(s) 59, 596, 732
BmiI GGNNCC 3 cut(s) 311, 675, 734
BoxI GACNNNNGTC 1 cut(s) 750
Bpu1102I GCTNAGC 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 449
BsaJI CCNNGG 1 cut(s) 62
BsaWI WCCGGW 1 cut(s) 720
Bsc4I CCNNNNNNNGG 3 cut(s) 32, 68, 605
Bse1I ACTGG 1 cut(s) 704
Bse3DI GCAATG 1 cut(s) 417
BseDI CCNNGG 1 cut(s) 62
BseGI GGATG 3 cut(s) 330, 455, 645
BseLI CCNNNNNNNGG 3 cut(s) 32, 68, 605
BseMI GCAATG 1 cut(s) 417
BseMII CTCAG 2 cut(s) 33, 503
BseNI ACTGG 1 cut(s) 704
BseRI GAGGAG 2 cut(s) 15, 19
BseX3I CGGCCG 1 cut(s) 70
BseXI GCAGC 2 cut(s) 28, 307
Bsh1236I CGCG 2 cut(s) 33, 155
Bsh1285I CGRYCG 1 cut(s) 73
BshFI GGCC 3 cut(s) 61, 72, 597
BshNI GGYRCC 1 cut(s) 309
BsiEI CGRYCG 1 cut(s) 73
BsiHKAI GWGCWC 2 cut(s) 394, 520
BsiHKCI CYCGRG 1 cut(s) 134
BsiSI CCGG 2 cut(s) 407, 721
BslFI GGGAC 1 cut(s) 340
BslI CCNNNNNNNGG 3 cut(s) 32, 68, 605
BsmFI GGGAC 1 cut(s) 340
BsnI GGCC 3 cut(s) 61, 72, 597
BsoBI CYCGRG 1 cut(s) 134
Bsp1286I GDGCHC 2 cut(s) 394, 520
Bsp143I GATC 2 cut(s) 435, 673
Bsp1720I GCTNAGC 1 cut(s) 19
BspACI CCGC 7 cut(s) 33, 73, 127, 155, 299, 334, 551
BspANI GGCC 3 cut(s) 61, 72, 597
BspCNI CTCAG 2 cut(s) 32, 504
BspFNI CGCG 2 cut(s) 33, 155
BspLI GGNNCC 3 cut(s) 311, 675, 734
BspMI ACCTGC 1 cut(s) 175
BspPI GGATC 2 cut(s) 668, 681
BspT107I GGYRCC 1 cut(s) 309
BsrBI CCGCTC 1 cut(s) 75
BsrDI GCAATG 1 cut(s) 417
BsrI ACTGG 1 cut(s) 704
BssECI CCNNGG 1 cut(s) 62
BssMI GATC 2 cut(s) 435, 673
BssT1I CCWWGG 1 cut(s) 62
Bst4CI ACNGT 3 cut(s) 112, 389, 587
Bst6I CTCTTC 1 cut(s) 168
BstC8I GCNNGC 3 cut(s) 16, 127, 478
BstDEI CTNAG 2 cut(s) 19, 512
BstF5I GGATG 3 cut(s) 330, 455, 645
BstFNI CGCG 2 cut(s) 33, 155
BstHHI GCGC 2 cut(s) 184, 571
BstKTI GATC 2 cut(s) 438, 676
BstMBI GATC 2 cut(s) 435, 673
BstMCI CGRYCG 1 cut(s) 73
BstMWI GCNNNNNNNGC 5 cut(s) 15, 20, 122, 307, 515
BstNSI RCATGY 1 cut(s) 575
BstPAI GACNNNNGTC 1 cut(s) 750
BstUI CGCG 2 cut(s) 33, 155
BstV1I GCAGC 2 cut(s) 28, 307
BstX2I RGATCY 1 cut(s) 673
BstYI RGATCY 1 cut(s) 673
BstZI CGGCCG 1 cut(s) 70
BsuI GTATCC 1 cut(s) 552
BsuRI GGCC 3 cut(s) 61, 72, 597
BtrI CACGTC 2 cut(s) 682, 712
BtsCI GGATG 3 cut(s) 330, 455, 645
BtsIMutI CAGTG 2 cut(s) 385, 509
BveI ACCTGC 1 cut(s) 175
Cac8I GCNNGC 3 cut(s) 16, 127, 478
CaiI CAGNNNCTG 1 cut(s) 774
CfoI GCGC 2 cut(s) 184, 571
Cfr13I GGNCC 3 cut(s) 59, 596, 732
Csp6I GTAC 3 cut(s) 289, 401, 627
CviAII CATG 4 cut(s) 10, 98, 554, 572
CviQI GTAC 3 cut(s) 289, 401, 627
DdeI CTNAG 2 cut(s) 19, 512
DpnI GATC 2 cut(s) 437, 675
DpnII GATC 2 cut(s) 435, 673
EaeI YGGCCR 1 cut(s) 70
EagI CGGCCG 1 cut(s) 70
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
EciI GGCGGA 1 cut(s) 323
EclXI CGGCCG 1 cut(s) 70
Eco130I CCWWGG 1 cut(s) 62
Eco47I GGWCC 1 cut(s) 732
Eco52I CGGCCG 1 cut(s) 70
Eco57I CTGAAG 1 cut(s) 624
Eco88I CYCGRG 1 cut(s) 134
EcoT14I CCWWGG 1 cut(s) 62
ErhI CCWWGG 1 cut(s) 62
FaeI CATG 4 cut(s) 13, 101, 557, 575
FaiI YATR 8 cut(s) 11, 38, 80, 99, 493, 555, 566, 573
FaqI GGGAC 1 cut(s) 340
FatI CATG 4 cut(s) 9, 97, 553, 571
FauI CCCGC 1 cut(s) 134
FblI GTMKAC 1 cut(s) 279
Fnu4HI GCNGC 4 cut(s) 42, 73, 296, 299
FokI GGATG 3 cut(s) 317, 462, 652
Fsp4HI GCNGC 4 cut(s) 42, 73, 296, 299
FspBI CTAG 1 cut(s) 219
GlaI GCGC 2 cut(s) 183, 570
GluI GCNGC 4 cut(s) 42, 73, 296, 299
HaeIII GGCC 3 cut(s) 61, 72, 597
HapII CCGG 2 cut(s) 407, 721
HhaI GCGC 2 cut(s) 184, 571
Hin1II CATG 4 cut(s) 13, 101, 557, 575
Hin6I GCGC 2 cut(s) 182, 569
HinP1I GCGC 2 cut(s) 182, 569
HincII GTYRAC 1 cut(s) 661
HindII GTYRAC 1 cut(s) 661
HinfI GANTC 3 cut(s) 215, 341, 771
HpaII CCGG 2 cut(s) 407, 721
HphI GGTGA 1 cut(s) 316
Hpy166II GTNNAC 4 cut(s) 280, 444, 461, 661
Hpy188I TCNGA 4 cut(s) 214, 377, 487, 604
Hpy188III TCNNGA 3 cut(s) 136, 219, 677
Hpy8I GTNNAC 4 cut(s) 280, 444, 461, 661
Hpy99I CGWCG 2 cut(s) 116, 683
HpyAV CCTTC 6 cut(s) 95, 172, 236, 420, 599, 758
HpyCH4III ACNGT 3 cut(s) 112, 389, 587
HpyCH4IV ACGT 3 cut(s) 650, 681, 711
HpyCH4V TGCA 2 cut(s) 509, 709
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 20, 122, 307, 515
HpyF3I CTNAG 2 cut(s) 19, 512
HpySE526I ACGT 3 cut(s) 650, 681, 711
Hsp92II CATG 4 cut(s) 13, 101, 557, 575
HspAI GCGC 2 cut(s) 182, 569
Kzo9I GATC 2 cut(s) 435, 673
LmnI GCTCC 5 cut(s) 6, 28, 80, 215, 377
Lsp1109I GCAGC 2 cut(s) 28, 307
MaeI CTAG 1 cut(s) 219
MaeII ACGT 3 cut(s) 650, 681, 711
MaeIII GTNAC 1 cut(s) 104
MalI GATC 2 cut(s) 437, 675
MbiI CCGCTC 1 cut(s) 75
MboI GATC 2 cut(s) 435, 673
MboII GAAGA 2 cut(s) 185, 360
MfeI CAATTG 2 cut(s) 304, 704
MflI RGATCY 1 cut(s) 673
MhlI GDGCHC 2 cut(s) 394, 520
MluCI AATT 5 cut(s) 149, 304, 503, 542, 704
MlyI GAGTC 2 cut(s) 224, 335
MmeI TCCRAC 1 cut(s) 355
MnlI CCTC 9 cut(s) 36, 132, 162, 226, 262, 347, 368, 416, 630
MspI CCGG 2 cut(s) 407, 721
MunI CAATTG 2 cut(s) 304, 704
MvnI CGCG 2 cut(s) 33, 155
MwoI GCNNNNNNNGC 5 cut(s) 15, 20, 122, 307, 515
NdeII GATC 2 cut(s) 435, 673
NlaIII CATG 4 cut(s) 13, 101, 557, 575
NlaIV GGNNCC 3 cut(s) 311, 675, 734
NmeAIII GCCGAG 1 cut(s) 48
NspI RCATGY 1 cut(s) 575
PfeI GAWTC 1 cut(s) 771
PkrI GCNGC 4 cut(s) 43, 74, 297, 300
PleI GAGTC 2 cut(s) 223, 335
PpsI GAGTC 2 cut(s) 223, 335
PshAI GACNNNNGTC 1 cut(s) 750
PspN4I GGNNCC 3 cut(s) 311, 675, 734
PspPI GGNCC 3 cut(s) 59, 596, 732
PstNI CAGNNNCTG 1 cut(s) 774
PsuI RGATCY 1 cut(s) 673
RsaI GTAC 3 cut(s) 290, 402, 628
RsaNI GTAC 3 cut(s) 289, 401, 627
SatI GCNGC 4 cut(s) 42, 73, 296, 299
Sau3AI GATC 2 cut(s) 435, 673
Sau96I GGNCC 3 cut(s) 59, 596, 732
ScaI AGTACT 1 cut(s) 628
SchI GAGTC 2 cut(s) 224, 335
SduI GDGCHC 2 cut(s) 394, 520
SinI GGWCC 1 cut(s) 732
SmlI CTYRAG 1 cut(s) 464
SmoI CTYRAG 1 cut(s) 464
Sse9I AATT 5 cut(s) 149, 304, 503, 542, 704
SsiI CCGC 7 cut(s) 33, 73, 127, 155, 299, 334, 551
SspMI CTAG 1 cut(s) 219
StyI CCWWGG 1 cut(s) 62
TaaI ACNGT 3 cut(s) 112, 389, 587
TaiI ACGT 3 cut(s) 653, 684, 714
TaqI TCGA 2 cut(s) 339, 744
TasI AATT 5 cut(s) 149, 304, 503, 542, 704
TatI WGTACW 1 cut(s) 626
TauI GCSGC 2 cut(s) 75, 301
TfiI GAWTC 1 cut(s) 771
TscAI CASTG 2 cut(s) 392, 516
TseI GCWGC 2 cut(s) 41, 295
TspDTI ATGAA 1 cut(s) 114
TspGWI ACGGA 1 cut(s) 678
TspRI CASTG 2 cut(s) 392, 516
VpaK11BI GGWCC 1 cut(s) 732
XapI RAATTY 3 cut(s) 149, 503, 542
XbaI TCTAGA 1 cut(s) 218
XceI RCATGY 1 cut(s) 575
XmiI GTMKAC 1 cut(s) 279
XspI CTAG 1 cut(s) 219
ZrmI AGTACT 1 cut(s) 628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.