Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0014436

Physical Location & Seq

Genomic Coordinates Forward (+)

20671969 .. 20674615

Gene Structure 2647 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGATTAGTTCTCAATATTACAACGGTACAAACTCCCCTCTCCTAGTCCTATACCTATGTTATCCTCCTCCACCTTCTAATCATTTTCTATCCCACATTCTCCCACAGTTAAAAACACAAAGACCCATCTATCTATCCATCTGCTGTCCAAAACAATCCAAGACTGCAGACACACACACTCTCTCTCTCTCTTCTCTTTCTCTTTCTCTCTCCGAAATCAGTCTCCAATCTGATCACCAACAATCTTTCAACAACTCAACCACCAGCAAAACCTCAACACCTACAACAACCACCACCACTTCCAGCAGCTCCAGGTCCTCCTTCCTTAGTAATCCTCCTCACCCTAATTACCCCCACCAAAACGACGACGCTGGAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTCTCCTCGTCTTCTTCCAAACACTACTTCCCATCGAACCACCCAACCCCTCCCACCCCAAACCCTCTCCCCACCGCCACCACCACTCCCACCCCCGCCGATTTTTCCTTCTCCCCCTCCCTCGTCAACTTCGAGCTCTCCAACGGAAAGTGGGCCCCGGAAATCCTCTTGGAGACCGCCAGAGCCATCGCTGACAAGAACAGCTCCCGCGTCCAGCAGCTCATGTGGATGCTTAACGAGCTCGGCAGTCCATACGGCGACACTGACCAGAAACTCGCCTCCTATTTCCTACAAGCCTTGTTCAGCCGCATGACCGACTCCGGCGACCGCTGCTACCGAACCCTAATCTCCGCCTCGGAGAAAACGTGTTCCTTCGAGTCCACAAGAAAAATGGTGCTCAAGTTTCAGGAGGTCAGCCCTTGGACCACTTTCGGACATGTGGCGTGTAATGGCGCGATCATGGAGGCCTTTGATGGTGAGCCCAAGCTTCACATAATCGACATCAGCAACACTTACTGCACCCAGTGGCCGACTCTGCTCGAGGCGCTGGCCACTCGTACTGATGAGACGCCGCACTTGCGTCTCACCACTGTTGTGGCTAACAGAGCCAACGACGGTTCTGGCGGCGCAGCCGCGCAGAAAGTAATGAAGGAAATTGGCGCCAGGATGGAAAAGTTTGCCCGGTTGATGGGGGTGCCTTTCAAATTCAACGCCGTCCATCACTCCGGCGATCTTTCCGAGCTGAATTTATCAGAGTTGGATATCAGAGACGATGAGGCCTTGGCAATCAACTGCGTCGGCACTCTACATTCCGTTCAGTCAATCGGAAATCGCCGATCATTCACTCTCGTTGAGGAAGAGGCTGATCTCGACGTTGGGGTTGACGGGTTTGACTTCGTTCATGGGTTTCAAGAGTGCTTGAGATGGTTTAGGGTTTACTTCGAGGCATTGGACGAGAGCTTTTCCAGGACCAGCAACGAGCGGTTGATGCTCGAGCGGGCCGCCGGGCGAGCTGTGGTGGATTTGGTGGCCTGCGCGCCTTCGGAGTCGGTGGAGCGGCGCGAGACCGCCACCCGCTGGTCGAGGCGTATGCATGTGGCGGGGTTTAGTCCCGCGATGTTCAGTGATGAGGTGTGCGATGACGTACGCGCCTTGTTGAGGAGGTATAAGGAGGGTTGGGCAATGACACAGATCAGCCGGTGGTTTGGGCTAGTGCTTGGAGGCCTTGATACGGTGGTTGTTGATCATATATTTCACACGTGTTTTGGTTTTTTGTCGCACGTGCATGGAATGAGTGTACTTGTGTTTGAAAAAGGAGAGAGGGAGATAATAGTGCTTTGGACTTGTTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007346 GO:0007389 GO:0008150 GO:0008356 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045786 GO:0045930 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0051171 GO:0051252 GO:0051301 GO:0051726 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0060255 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:0098771 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

588

Amino Acids

65.67

Weight (kDa)

5.56

Isoelectric Point (pI)

50.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	191 - 537	9.2e-87	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37650
fragaria_vesca	FvH4_1g17690
malus_domestica	MD02G1185900.v1.1 MD15G1307800.v1.1
prunus_persica	Prupe.6G220800_v2.0.a1
pyrus_communis	pycom02g15090 pycom15g26030
rosa_chinensis	RchiOBHm_Chr2g0108031
rosa_laevigata	RLG00000017634
rosa_multiflora	Rmu_sc0001484.1_g000021
rosa_roxburghii	Rroxscaffold_2G00135710
rosa_rugosa	Rorug02G0149800
rosa_samantha	Rh2AG198800 Rh2BG211700 Rh2CG203400 Rh2DG206400
rosa_wichuraiana	Rw2G015780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1070, 1105
AccB7I	CCANNNNNTGG	1 cut(s)	1488
AccBSI	CCGCTC	3 cut(s)	1393, 1408, 1468
AccII	CGCG	7 cut(s)	621, 866, 1046, 1448, 1473, 1526, 1560
AcoI	YGGCCR	2 cut(s)	938, 960
AcsI	RAATTY	2 cut(s)	1115, 1156
AcvI	CACGTG	2 cut(s)	1671, 1693
AcyI	GRCGYC	2 cut(s)	980, 1071
AdeI	CACNNNGTG	1 cut(s)	936
AfaI	GTAC	4 cut(s)	28, 970, 1557, 1710
AfiI	CCNNNNNNNGG	4 cut(s)	1099, 1488, 1569, 1642
AflIII	ACRYGT	4 cut(s)	776, 847, 1668, 1670
AgsI	TTSAA	6 cut(s)	250, 388, 1114, 1120, 1322, 1721
AjnI	CCWGG	3 cut(s)	311, 1073, 1376
AjuI	GAANNNNNNNTTGG	2 cut(s)	422, 454
AleI	CACNNNNGTG	1 cut(s)	1004
AluBI	AGCT	9 cut(s)	309, 547, 615, 631, 652, 898, 1153, 1371, 1424
AluI	AGCT	9 cut(s)	309, 547, 615, 631, 652, 898, 1153, 1371, 1424
Alw21I	GWGCWC	3 cut(s)	549, 654, 810
Alw26I	GTCTC	6 cut(s)	227, 578, 971, 998, 1173, 1469
Ama87I	CYCGRG	2 cut(s)	950, 1403
AoxI	GGCC	8 cut(s)	564, 876, 938, 960, 1188, 1410, 1440, 1633
ApaI	GGGCCC	1 cut(s)	568
ApeKI	GCWGC	4 cut(s)	306, 628, 741, 1040
ApoI	RAATTY	2 cut(s)	1115, 1156
AspLEI	GCGC	9 cut(s)	866, 958, 1040, 1048, 1073, 1448, 1450, 1473, 1562
AspS9I	GGNCC	6 cut(s)	315, 564, 565, 834, 1380, 1410
AsuC2I	CCSGG	3 cut(s)	569, 1093, 1417
AsuHPI	GGTGA	4 cut(s)	227, 332, 899, 988
AvaI	CYCGRG	2 cut(s)	950, 1403
AvaII	GGWCC	3 cut(s)	315, 834, 1380
BaeGI	GKGCMC	1 cut(s)	568
BaeI	ACNNNNGTAYC	2 cut(s)	1632, 1665
BalI	TGGCCA	1 cut(s)	962
BanI	GGYRCC	2 cut(s)	1070, 1105
BanII	GRGCYC	4 cut(s)	549, 568, 654, 894
BbrPI	CACGTG	2 cut(s)	1671, 1693
BbsI	GAAGAC	2 cut(s)	414, 414
Bbv12I	GWGCWC	3 cut(s)	549, 654, 810
BbvI	GCAGC	4 cut(s)	318, 640, 728, 1052
BccI	CCATC	9 cut(s)	134, 146, 451, 605, 878, 1072, 1093, 1137, 1329
BceAI	ACGGC	2 cut(s)	682, 1109
BcgI	CGANNNNNNTGC	2 cut(s)	1483, 1517
BciT130I	CCWGG	3 cut(s)	313, 1075, 1378
BclI	TGATCA	2 cut(s)	232, 1654
BcnI	CCSGG	3 cut(s)	569, 1093, 1417
BcoDI	GTCTC	6 cut(s)	227, 578, 971, 998, 1173, 1469
BfaI	CTAG	2 cut(s)	44, 1622
BfmI	CTRYAG	1 cut(s)	165
BfoI	RGCGCY	2 cut(s)	959, 1074
Bme1390I	CCNGG	6 cut(s)	313, 569, 1075, 1093, 1378, 1417
Bme18I	GGWCC	3 cut(s)	315, 834, 1380
BmeT110I	CYCGRG	2 cut(s)	950, 1403
BmgT120I	GGNCC	6 cut(s)	315, 564, 565, 834, 1380, 1410
BmiI	GGNNCC	4 cut(s)	566, 567, 1072, 1107
BmrFI	CCNGG	6 cut(s)	313, 569, 1075, 1093, 1378, 1417
BmrI	ACTGGG	1 cut(s)	928
BmsI	GCATC	2 cut(s)	630, 1389
BmuI	ACTGGG	1 cut(s)	928
BpiI	GAAGAC	2 cut(s)	414, 414
BpmI	CTGGAG	2 cut(s)	295, 393
BpuEI	CTTGAG	2 cut(s)	794, 1351
BpuMI	CCSGG	3 cut(s)	569, 1093, 1417
BsaAI	YACGTR	2 cut(s)	1671, 1693
BsaHI	GRCGYC	2 cut(s)	980, 1071
BsaI	GGTCTC	2 cut(s)	578, 1469
BsaJI	CCNNGG	4 cut(s)	567, 765, 830, 1191
BsaXI	ACNNNNNCTCC	4 cut(s)	481, 511, 761, 791
Bsc4I	CCNNNNNNNGG	4 cut(s)	1099, 1488, 1569, 1642
Bse118I	RCCGGY	1 cut(s)	1608
Bse1I	ACTGG	1 cut(s)	934
Bse3DI	GCAATG	1 cut(s)	1599
BseBI	CCWGG	3 cut(s)	313, 1075, 1378
BseDI	CCNNGG	4 cut(s)	567, 765, 830, 1191
BseGI	GGATG	3 cut(s)	406, 645, 1083
BseLI	CCNNNNNNNGG	4 cut(s)	1099, 1488, 1569, 1642
BseMI	GCAATG	1 cut(s)	1599
BseNI	ACTGG	1 cut(s)	934
BsePI	GCGCGC	1 cut(s)	1446
BseRI	GAGGAG	4 cut(s)	57, 327, 406, 1585
BseSI	GKGCMC	1 cut(s)	568
BseXI	GCAGC	4 cut(s)	318, 640, 728, 1052
BsgI	GTGCAG	1 cut(s)	913
Bsh1236I	CGCG	7 cut(s)	621, 866, 1046, 1448, 1473, 1526, 1560
Bsh1285I	CGRYCG	1 cut(s)	739
BshFI	GGCC	8 cut(s)	566, 878, 940, 962, 1190, 1412, 1442, 1635
BshNI	GGYRCC	2 cut(s)	1070, 1105
BsiEI	CGRYCG	1 cut(s)	739
BsiHKAI	GWGCWC	3 cut(s)	549, 654, 810
BsiHKCI	CYCGRG	2 cut(s)	950, 1403
BsiSI	CCGG	6 cut(s)	569, 732, 1093, 1137, 1416, 1609
BsiWI	CGTACG	1 cut(s)	1555
BslFI	GGGAC	1 cut(s)	1506
BslI	CCNNNNNNNGG	4 cut(s)	1099, 1488, 1569, 1642
BsmAI	GTCTC	6 cut(s)	227, 578, 971, 998, 1173, 1469
BsmBI	CGTCTC	3 cut(s)	971, 998, 1173
BsmFI	GGGAC	1 cut(s)	1506
BsmI	GAATGC	1 cut(s)	386
BsnI	GGCC	8 cut(s)	566, 878, 940, 962, 1190, 1412, 1442, 1635
Bso31I	GGTCTC	2 cut(s)	578, 1469
BsoBI	CYCGRG	2 cut(s)	950, 1403
Bsp120I	GGGCCC	1 cut(s)	564
Bsp1286I	GDGCHC	5 cut(s)	549, 568, 654, 810, 894
Bsp143I	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
BspANI	GGCC	8 cut(s)	566, 878, 940, 962, 1190, 1412, 1442, 1635
BspFNI	CGCG	7 cut(s)	621, 866, 1046, 1448, 1473, 1526, 1560
BspLI	GGNNCC	4 cut(s)	566, 567, 1072, 1107
BspMAI	CTGCAG	1 cut(s)	169
BspT107I	GGYRCC	2 cut(s)	1070, 1105
BspTNI	GGTCTC	2 cut(s)	578, 1469
BsrBI	CCGCTC	3 cut(s)	1393, 1408, 1468
BsrDI	GCAATG	1 cut(s)	1599
BsrFI	RCCGGY	1 cut(s)	1608
BsrI	ACTGG	1 cut(s)	934
BssAI	RCCGGY	1 cut(s)	1608
BssECI	CCNNGG	4 cut(s)	567, 765, 830, 1191
BssHII	GCGCGC	1 cut(s)	1446
BssMI	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
BssNI	GRCGYC	2 cut(s)	980, 1071
BssT1I	CCWWGG	2 cut(s)	830, 1191
Bst2UI	CCWGG	3 cut(s)	313, 1075, 1378
Bst4CI	ACNGT	5 cut(s)	26, 108, 1003, 1028, 1645
Bst6I	CTCTTC	2 cut(s)	196, 1263
BstACI	GRCGYC	2 cut(s)	980, 1071
BstBAI	YACGTR	2 cut(s)	1671, 1693
BstC8I	GCNNGC	5 cut(s)	960, 1410, 1422, 1444, 1448
BstDEI	CTNAG	1 cut(s)	326
BstENI	CCTNNNNNAGG	1 cut(s)	1567
BstF5I	GGATG	3 cut(s)	406, 645, 1083
BstFNI	CGCG	7 cut(s)	621, 866, 1046, 1448, 1473, 1526, 1560
BstH2I	RGCGCY	2 cut(s)	959, 1074
BstHHI	GCGC	9 cut(s)	866, 958, 1040, 1048, 1073, 1448, 1450, 1473, 1562
BstKTI	GATC	7 cut(s)	235, 870, 1144, 1250, 1279, 1605, 1657
BstMAI	GTCTC	6 cut(s)	227, 578, 971, 998, 1173, 1469
BstMBI	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
BstMCI	CGRYCG	1 cut(s)	739
BstMWI	GCNNNNNNNGC	8 cut(s)	649, 741, 946, 955, 988, 1016, 1399, 1421
BstNI	CCWGG	3 cut(s)	313, 1075, 1378
BstNSI	RCATGY	2 cut(s)	851, 1508
BstSCI	CCNGG	6 cut(s)	311, 567, 1073, 1091, 1376, 1415
BstSFI	CTRYAG	1 cut(s)	165
BstSLI	GKGCMC	1 cut(s)	568
BstUI	CGCG	7 cut(s)	621, 866, 1046, 1448, 1473, 1526, 1560
BstV1I	GCAGC	4 cut(s)	318, 640, 728, 1052
BstV2I	GAAGAC	2 cut(s)	414, 414
BstXI	CCANNNNNNTGG	1 cut(s)	1006
BsuRI	GGCC	8 cut(s)	566, 878, 940, 962, 1190, 1412, 1442, 1635
BtgZI	GCGATG	3 cut(s)	583, 1541, 1563
BtsCI	GGATG	3 cut(s)	406, 645, 1083
BtsIMutI	CAGTG	4 cut(s)	672, 941, 999, 1540
Cac8I	GCNNGC	5 cut(s)	960, 1410, 1422, 1444, 1448
CfoI	GCGC	9 cut(s)	866, 958, 1040, 1048, 1073, 1448, 1450, 1473, 1562
Cfr10I	RCCGGY	1 cut(s)	1608
Cfr13I	GGNCC	6 cut(s)	315, 564, 565, 834, 1380, 1410
CseI	GACGC	5 cut(s)	377, 610, 980, 988, 1195
Csp6I	GTAC	4 cut(s)	27, 969, 1556, 1709
CviAII	CATG	8 cut(s)	397, 634, 721, 848, 871, 1313, 1505, 1697
CviQI	GTAC	4 cut(s)	27, 969, 1556, 1709
DdeI	CTNAG	1 cut(s)	326
DinI	GGCGCC	1 cut(s)	1072
DpnI	GATC	7 cut(s)	234, 869, 1143, 1249, 1278, 1604, 1656
DpnII	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
DraIII	CACNNNGTG	1 cut(s)	936
EaeI	YGGCCR	2 cut(s)	938, 960
Eam1104I	CTCTTC	2 cut(s)	196, 1263
EarI	CTCTTC	2 cut(s)	196, 1263
EciI	GGCGGA	1 cut(s)	751
Ecl136II	GAGCTC	2 cut(s)	547, 652
Eco130I	CCWWGG	2 cut(s)	830, 1191
Eco147I	AGGCCT	3 cut(s)	878, 1190, 1635
Eco24I	GRGCYC	4 cut(s)	549, 568, 654, 894
Eco31I	GGTCTC	2 cut(s)	578, 1469
Eco32I	GATATC	1 cut(s)	1174
Eco47I	GGWCC	3 cut(s)	315, 834, 1380
Eco53kI	GAGCTC	2 cut(s)	547, 652
Eco72I	CACGTG	2 cut(s)	1671, 1693
Eco88I	CYCGRG	2 cut(s)	950, 1403
EcoICRI	GAGCTC	2 cut(s)	547, 652
EcoNI	CCTNNNNNAGG	1 cut(s)	1567
EcoO109I	RGGNCCY	2 cut(s)	315, 565
EcoRII	CCWGG	3 cut(s)	311, 1073, 1376
EcoRV	GATATC	1 cut(s)	1174
EcoT14I	CCWWGG	2 cut(s)	830, 1191
EcoT22I	ATGCAT	1 cut(s)	1506
EcoT38I	GRGCYC	4 cut(s)	549, 568, 654, 894
EgeI	GGCGCC	1 cut(s)	1072
EheI	GGCGCC	1 cut(s)	1072
ErhI	CCWWGG	2 cut(s)	830, 1191
Esp3I	CGTCTC	3 cut(s)	971, 998, 1173
FaeI	CATG	8 cut(s)	400, 637, 724, 851, 874, 1316, 1508, 1700
FaqI	GGGAC	1 cut(s)	1506
FatI	CATG	8 cut(s)	396, 633, 720, 847, 870, 1312, 1504, 1696
FauI	CCCGC	6 cut(s)	514, 626, 1401, 1493, 1504, 1531
FbaI	TGATCA	2 cut(s)	232, 1654
FokI	GGATG	3 cut(s)	413, 652, 1090
FriOI	GRGCYC	4 cut(s)	549, 568, 654, 894
FspBI	CTAG	2 cut(s)	44, 1622
GlaI	GCGC	9 cut(s)	865, 957, 1039, 1047, 1072, 1447, 1449, 1472, 1561
GsuI	CTGGAG	2 cut(s)	295, 393
HaeII	RGCGCY	2 cut(s)	959, 1074
HaeIII	GGCC	8 cut(s)	566, 878, 940, 962, 1190, 1412, 1442, 1635
HapII	CCGG	6 cut(s)	569, 732, 1093, 1137, 1416, 1609
HgaI	GACGC	5 cut(s)	377, 610, 980, 988, 1195
HhaI	GCGC	9 cut(s)	866, 958, 1040, 1048, 1073, 1448, 1450, 1473, 1562
Hin1I	GRCGYC	2 cut(s)	980, 1071
Hin1II	CATG	8 cut(s)	400, 637, 724, 851, 874, 1316, 1508, 1700
Hin6I	GCGC	9 cut(s)	864, 956, 1038, 1046, 1071, 1446, 1448, 1471, 1560
HinP1I	GCGC	9 cut(s)	864, 956, 1038, 1046, 1071, 1446, 1448, 1471, 1560
HincII	GTYRAC	2 cut(s)	538, 1294
HindII	GTYRAC	2 cut(s)	538, 1294
HindIII	AAGCTT	1 cut(s)	896
HinfI	GANTC	4 cut(s)	728, 788, 943, 1457
HpaII	CCGG	6 cut(s)	569, 732, 1093, 1137, 1416, 1609
HphI	GGTGA	4 cut(s)	227, 332, 899, 988
Hpy166II	GTNNAC	5 cut(s)	538, 792, 1294, 1348, 1709
Hpy188I	TCNGA	9 cut(s)	214, 232, 769, 845, 1150, 1165, 1178, 1238, 1456
Hpy188III	TCNNGA	3 cut(s)	818, 1280, 1322
Hpy8I	GTNNAC	5 cut(s)	538, 792, 1294, 1348, 1709
Hpy99I	CGWCG	5 cut(s)	368, 371, 1028, 1211, 1286
HpyAV	CCTTC	6 cut(s)	84, 331, 529, 793, 1054, 1461
HpyCH4III	ACNGT	5 cut(s)	26, 108, 1003, 1028, 1645
HpyCH4IV	ACGT	5 cut(s)	776, 1284, 1554, 1670, 1692
HpyCH4V	TGCA	4 cut(s)	167, 930, 1504, 1696
HpyF10VI	GCNNNNNNNGC	8 cut(s)	649, 741, 946, 955, 988, 1016, 1399, 1421
HpyF3I	CTNAG	1 cut(s)	326
HpySE526I	ACGT	5 cut(s)	776, 1284, 1554, 1670, 1692
Hsp92I	GRCGYC	2 cut(s)	980, 1071
Hsp92II	CATG	8 cut(s)	400, 637, 724, 851, 874, 1316, 1508, 1700
HspAI	GCGC	9 cut(s)	864, 956, 1038, 1046, 1071, 1446, 1448, 1471, 1560
KasI	GGCGCC	1 cut(s)	1070
Ksp22I	TGATCA	2 cut(s)	232, 1654
Kzo9I	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
LmnI	GCTCC	3 cut(s)	314, 620, 1465
Lsp1109I	GCAGC	4 cut(s)	318, 640, 728, 1052
LweI	GCATC	2 cut(s)	630, 1389
MaeI	CTAG	2 cut(s)	44, 1622
MaeII	ACGT	5 cut(s)	776, 1284, 1554, 1670, 1692
MalI	GATC	7 cut(s)	234, 869, 1143, 1249, 1278, 1604, 1656
MbiI	CCGCTC	3 cut(s)	1393, 1408, 1468
MboI	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
MboII	GAAGA	7 cut(s)	183, 389, 414, 416, 417, 419, 1280
MhlI	GDGCHC	5 cut(s)	549, 568, 654, 810, 894
MlsI	TGGCCA	1 cut(s)	962
MluCI	AATT	4 cut(s)	346, 1065, 1115, 1156
MluNI	TGGCCA	1 cut(s)	962
Mly113I	GGCGCC	1 cut(s)	1071
MlyI	GAGTC	4 cut(s)	722, 797, 937, 1466
MmeI	TCCRAC	2 cut(s)	576, 1149
Mox20I	TGGCCA	1 cut(s)	962
Mph1103I	ATGCAT	1 cut(s)	1506
MscI	TGGCCA	1 cut(s)	962
MseI	TTAA	3 cut(s)	110, 645, 1762
MslI	CAYNNNNRTG	3 cut(s)	638, 1004, 1695
Msp20I	TGGCCA	1 cut(s)	962
MspA1I	CMGCKG	2 cut(s)	741, 1488
MspI	CCGG	6 cut(s)	569, 732, 1093, 1137, 1416, 1609
MspR9I	CCNGG	6 cut(s)	313, 569, 1075, 1093, 1378, 1417
Mva1269I	GAATGC	1 cut(s)	386
MvaI	CCWGG	3 cut(s)	313, 1075, 1378
MvnI	CGCG	7 cut(s)	621, 866, 1046, 1448, 1473, 1526, 1560
MwoI	GCNNNNNNNGC	8 cut(s)	649, 741, 946, 955, 988, 1016, 1399, 1421
NarI	GGCGCC	1 cut(s)	1071
NciI	CCSGG	3 cut(s)	569, 1093, 1417
NdeII	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
NlaIII	CATG	8 cut(s)	400, 637, 724, 851, 874, 1316, 1508, 1700
NlaIV	GGNNCC	4 cut(s)	566, 567, 1072, 1107
NmeAIII	GCCGAG	1 cut(s)	633
NsiI	ATGCAT	1 cut(s)	1506
NspI	RCATGY	2 cut(s)	851, 1508
OliI	CACNNNNGTG	1 cut(s)	1004
PaeR7I	CTCGAG	2 cut(s)	950, 1403
PauI	GCGCGC	1 cut(s)	1446
PceI	AGGCCT	3 cut(s)	878, 1190, 1635
PciI	ACATGT	1 cut(s)	847
PcsI	WCGNNNNNNNCGW	2 cut(s)	540, 773
PctI	GAATGC	1 cut(s)	386
Pfl23II	CGTACG	1 cut(s)	1555
PflMI	CCANNNNNTGG	1 cut(s)	1488
PfoI	TCCNGGA	1 cut(s)	1376
PleI	GAGTC	4 cut(s)	722, 796, 937, 1465
PluTI	GGCGCC	1 cut(s)	1074
PmaCI	CACGTG	2 cut(s)	1671, 1693
PmlI	CACGTG	2 cut(s)	1671, 1693
PpsI	GAGTC	4 cut(s)	722, 796, 937, 1465
Ppu21I	YACGTR	2 cut(s)	1671, 1693
PpuMI	RGGWCCY	1 cut(s)	315
PscI	ACATGT	1 cut(s)	847
Psp124BI	GAGCTC	2 cut(s)	549, 654
Psp5II	RGGWCCY	1 cut(s)	315
Psp6I	CCWGG	3 cut(s)	311, 1073, 1376
PspCI	CACGTG	2 cut(s)	1671, 1693
PspGI	CCWGG	3 cut(s)	311, 1073, 1376
PspLI	CGTACG	1 cut(s)	1555
PspN4I	GGNNCC	4 cut(s)	566, 567, 1072, 1107
PspOMI	GGGCCC	1 cut(s)	564
PspPI	GGNCC	6 cut(s)	315, 564, 565, 834, 1380, 1410
PspPPI	RGGWCCY	1 cut(s)	315
PspXI	VCTCGAGB	2 cut(s)	950, 1403
PstI	CTGCAG	1 cut(s)	169
PteI	GCGCGC	1 cut(s)	1446
RsaI	GTAC	4 cut(s)	28, 970, 1557, 1710
RsaNI	GTAC	4 cut(s)	27, 969, 1556, 1709
RseI	CAYNNNNRTG	3 cut(s)	638, 1004, 1695
SacI	GAGCTC	2 cut(s)	549, 654
SaqAI	TTAA	3 cut(s)	110, 645, 1762
Sau3AI	GATC	7 cut(s)	232, 867, 1141, 1247, 1276, 1602, 1654
Sau96I	GGNCC	6 cut(s)	315, 564, 565, 834, 1380, 1410
SchI	GAGTC	4 cut(s)	722, 797, 937, 1466
ScrFI	CCNGG	6 cut(s)	313, 569, 1075, 1093, 1378, 1417
SduI	GDGCHC	5 cut(s)	549, 568, 654, 810, 894
SfaNI	GCATC	2 cut(s)	630, 1389
SfcI	CTRYAG	1 cut(s)	165
SfoI	GGCGCC	1 cut(s)	1072
Sfr274I	CTCGAG	2 cut(s)	950, 1403
SinI	GGWCC	3 cut(s)	315, 834, 1380
SlaI	CTCGAG	2 cut(s)	950, 1403
SmiMI	CAYNNNNRTG	3 cut(s)	638, 1004, 1695
SmlI	CTYRAG	4 cut(s)	809, 950, 1330, 1403
SmoI	CTYRAG	4 cut(s)	809, 950, 1330, 1403
Sse9I	AATT	4 cut(s)	346, 1065, 1115, 1156
SseBI	AGGCCT	3 cut(s)	878, 1190, 1635
SspDI	GGCGCC	1 cut(s)	1070
SspI	AATATT	1 cut(s)	17
SspMI	CTAG	2 cut(s)	44, 1622
SstI	GAGCTC	2 cut(s)	549, 654
StuI	AGGCCT	3 cut(s)	878, 1190, 1635
StyD4I	CCNGG	6 cut(s)	311, 567, 1073, 1091, 1376, 1415
StyI	CCWWGG	2 cut(s)	830, 1191
TaaI	ACNGT	5 cut(s)	26, 108, 1003, 1028, 1645
TaiI	ACGT	5 cut(s)	779, 1287, 1557, 1673, 1695
TaqI	TCGA	9 cut(s)	446, 543, 786, 909, 951, 1281, 1353, 1404, 1493
TaqII	GACCGA	1 cut(s)	740
TasI	AATT	4 cut(s)	346, 1065, 1115, 1156
TatI	WGTACW	1 cut(s)	1708
TauI	GCSGC	6 cut(s)	720, 985, 1038, 1046, 1415, 1471
Tru1I	TTAA	3 cut(s)	110, 645, 1762
Tru9I	TTAA	3 cut(s)	110, 645, 1762
TscAI	CASTG	4 cut(s)	679, 941, 1006, 1540
TseI	GCWGC	4 cut(s)	306, 628, 741, 1040
TspDTI	ATGAA	4 cut(s)	385, 417, 1073, 1301
TspGWI	ACGGA	2 cut(s)	570, 1213
TspRI	CASTG	4 cut(s)	679, 941, 1006, 1540
Van91I	CCANNNNNTGG	1 cut(s)	1488
VpaK11BI	GGWCC	3 cut(s)	315, 834, 1380
XagI	CCTNNNNNAGG	1 cut(s)	1567
XapI	RAATTY	2 cut(s)	1115, 1156
XceI	RCATGY	2 cut(s)	851, 1508
XcmI	CCANNNNNNNNNTGG	1 cut(s)	799
XhoI	CTCGAG	2 cut(s)	950, 1403
XspI	CTAG	2 cut(s)	44, 1622
Zsp2I	ATGCAT	1 cut(s)	1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.