pycom15g29890

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
27024041 .. 27027048
3008 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1377 bp
ATGAATATTGAAAATTGTGGTTCATTGCGTCGCAGTATATTTGTTGCGACATGGAACGTGGGAGGAAAGTCACCCAACAATGGCCTGAACCTCCAAGATTTCTTGCAGGTGGAGGGGTCTTCCGACATCTATGTTTTAGGTACTGTATTTTTCTTCTTATATATCATAAGGTTTCAGGAAATTGTTCCCTTGAGTGCCGGAAACGTTTTAGTGATCGAGGACAATGAACCAGCAGCAAAATGGCTAGCCCTCATTAGCCAAGCACTTAATAAACCCCAAAATGCGTCCTACAATATGCATTCTTCCTCCGATTCATCAGGCCATGGTTCCAACAACTCATTGAATAACAACAAGGAATCCAAGTCCCCAGGCAGTCTCAACATCTTCCAGAAGCCTTCTCTCAAAGCTCTTAGCAAAAGCTTCAAGGCAAATAGTAGCCTTCTCAAGTCTTGCAACTGCCCCGTGGAATTTCCATCTCACGAAAGGCGGCGAATAAGAAAGCTCAGTGATCCTACTAGTAAATTAGGCTCAATTTCTCCTCGGCTTACTTCTGGAAGCGACACTAGTGTAGATGAATTTCTTGCAATTGCAGGGATTCAGTCCCCATCTTCCTCAAGCGACATGAATTACCGCCTTATAACAAGCAAGAAGATGGTAGGTATTTTCGTATCGGTTTGGGTTCGAAAGGAGTTAGTACCTCACATTGGCCATCTCAGAGTCTCCACGGTTGGAAGAGGAATAATGGGCTGCCTCGGAAATAAGGGATGTATATCAATAAGCATGACATTGCACCAAACGAGCTTTTGCTTCGTGTGCAGTCACTTGGCTTCCGGGGAGAAGGAAGGCGATGAGCTGAAAAGGAATGCCGACGTGATTGAGATCCTTAAAAGCGCACAATTTCCCAAGGTTTGCAAGAATCCATACCGCCGCCCTTGCGAAAGAATAACCGATCATGAGTACGTACATATTACTCTATATGAAGATGCTTGCAGGATAATTGATGTTTTGAATATGGAGAGAGAAGCTGGGAGGGTATTTAATGGGTTCAAGGAGGGACAAATCTTCTTTGCCCCCACTTACAAGTACTCTCATAACTCAGACTCTTACGCTGGAGAAACTACCAAGTCCAAGAAGAAACGACGAACCCCAGCATGGTGCGATCGGATACTATGGCGCGGGGATGGCTTTGAGCAATTATCTTATATTCGCGGGGAGTCGAGATTCTCCGATCACAGACCCGTGTGTGCTGTGTTTTCAGTGGAAGTGAATGTGCTTAGAAGCAAAAACAACAGATTCAGAAAGGGTTACTCTTGTGCTGCTCCAAGACTAGAATTTGACGAATGCATGCCTCAAAGACATAGCTTCTATGAGTACTAG

Protein Analysis

459

Amino Acids

51.47

Weight (kDa)

9.17

Isoelectric Point (pI)

54.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos2 PF22669 205 - 321 1.5e-20 Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2 PF22669 334 - 416 9e-24 Endonuclease/Exonuclease/phosphatase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012202)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 638
AarI CACCTGC 1 cut(s) 97
Acc36I ACCTGC 1 cut(s) 97
AccII CGCG 2 cut(s) 1176, 1209
AciI CCGC 6 cut(s) 487, 631, 925, 928, 1176, 1209
AclI AACGTT 1 cut(s) 204
AclWI GGATC 2 cut(s) 503, 874
AcoI YGGCCR 1 cut(s) 706
AcsI RAATTY 3 cut(s) 467, 575, 1331
AfaI GTAC 6 cut(s) 142, 696, 959, 963, 1085, 1373
AfiI CCNNNNNNNGG 3 cut(s) 80, 704, 1152
AgsI TTSAA 5 cut(s) 11, 343, 424, 1009, 1048
AhlI ACTAGT 2 cut(s) 515, 563
AjiI CACGTC 1 cut(s) 871
AjnI CCWGG 1 cut(s) 367
AluBI AGCT 7 cut(s) 407, 420, 502, 801, 853, 1025, 1362
AluI AGCT 7 cut(s) 407, 420, 502, 801, 853, 1025, 1362
Alw26I GTCTC 2 cut(s) 380, 724
AlwI GGATC 2 cut(s) 503, 874
AoxI GGCC 3 cut(s) 82, 319, 706
ApeKI GCWGC 3 cut(s) 233, 747, 1316
ApoI RAATTY 3 cut(s) 467, 575, 1331
Asp700I GAANNNNTTC 1 cut(s) 183
AspLEI GCGC 2 cut(s) 893, 1176
AsuC2I CCSGG 1 cut(s) 832
AsuHPI GGTGA 1 cut(s) 63
AsuII TTCGAA 1 cut(s) 682
AsuNHI GCTAGC 1 cut(s) 244
BalI TGGCCA 1 cut(s) 708
BbsI GAAGAC 1 cut(s) 111
BbvI GCAGC 3 cut(s) 245, 734, 1303
BccI CCATC 5 cut(s) 481, 613, 646, 717, 1175
BciT130I CCWGG 1 cut(s) 369
BciVI GTATCC 1 cut(s) 1158
BcnI CCSGG 1 cut(s) 832
BcoDI GTCTC 2 cut(s) 380, 724
BcuI ACTAGT 2 cut(s) 515, 563
BfaI CTAG 5 cut(s) 245, 516, 564, 1328, 1375
BfuAI ACCTGC 1 cut(s) 97
BfuI GTATCC 1 cut(s) 1158
BisI GCNGC 5 cut(s) 234, 488, 748, 928, 1317
BlsI GCNGC 5 cut(s) 235, 489, 749, 929, 1318
BmcAI AGTACT 2 cut(s) 1085, 1373
Bme1390I CCNGG 2 cut(s) 369, 832
BmgBI CACGTC 1 cut(s) 871
BmiI GGNNCC 1 cut(s) 328
BmrFI CCNGG 2 cut(s) 369, 832
BmsI GCATC 1 cut(s) 973
BmtI GCTAGC 1 cut(s) 248
BpiI GAAGAC 1 cut(s) 111
BpmI CTGGAG 1 cut(s) 1131
Bpu14I TTCGAA 1 cut(s) 682
BpuEI CTTGAG 3 cut(s) 211, 428, 598
BpuMI CCSGG 1 cut(s) 832
BsaAI YACGTR 1 cut(s) 961
BsaBI GATNNNNATC 2 cut(s) 769, 878
BsaJI CCNNGG 8 cut(s) 322, 367, 462, 539, 723, 751, 831, 903
Bsc4I CCNNNNNNNGG 3 cut(s) 80, 704, 1152
Bse3DI GCAATG 2 cut(s) 23, 785
Bse8I GATNNNNATC 2 cut(s) 769, 878
BseBI CCWGG 1 cut(s) 369
BseDI CCNNGG 8 cut(s) 322, 367, 462, 539, 723, 751, 831, 903
BseGI GGATG 2 cut(s) 770, 1186
BseJI GATNNNNATC 2 cut(s) 769, 878
BseLI CCNNNNNNNGG 3 cut(s) 80, 704, 1152
BseMI GCAATG 2 cut(s) 23, 785
BseMII CTCAG 3 cut(s) 517, 727, 1110
BseRI GAGGAG 1 cut(s) 528
BseXI GCAGC 3 cut(s) 245, 734, 1303
BseYI CCCAGC 2 cut(s) 1025, 1147
BsgI GTGCAG 1 cut(s) 835
Bsh1236I CGCG 2 cut(s) 1176, 1209
Bsh1285I CGRYCG 1 cut(s) 1162
BshFI GGCC 3 cut(s) 84, 321, 708
BsiEI CGRYCG 1 cut(s) 1162
BsiSI CCGG 2 cut(s) 198, 831
BslFI GGGAC 3 cut(s) 349, 586, 1068
BslI CCNNNNNNNGG 3 cut(s) 80, 704, 1152
BsmAI GTCTC 2 cut(s) 380, 724
BsmFI GGGAC 3 cut(s) 349, 586, 1068
BsmI GAATGC 3 cut(s) 298, 868, 1346
BsnI GGCC 3 cut(s) 84, 321, 708
Bsp119I TTCGAA 1 cut(s) 682
Bsp143I GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
Bsp19I CCATGG 1 cut(s) 322
BspACI CCGC 6 cut(s) 487, 631, 925, 928, 1176, 1209
BspANI GGCC 3 cut(s) 84, 321, 708
BspCNI CTCAG 3 cut(s) 516, 726, 1109
BspFNI CGCG 2 cut(s) 1176, 1209
BspHI TCATGA 1 cut(s) 952
BspLI GGNNCC 1 cut(s) 328
BspMI ACCTGC 1 cut(s) 97
BspOI GCTAGC 1 cut(s) 248
BspPI GGATC 2 cut(s) 503, 874
BspT104I TTCGAA 1 cut(s) 682
BsrDI GCAATG 2 cut(s) 23, 785
BssECI CCNNGG 8 cut(s) 322, 367, 462, 539, 723, 751, 831, 903
BssMI GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
BssT1I CCWWGG 2 cut(s) 322, 903
Bst2UI CCWGG 1 cut(s) 369
Bst4CI ACNGT 2 cut(s) 145, 727
Bst6I CTCTTC 1 cut(s) 727
BstBAI YACGTR 1 cut(s) 961
BstBI TTCGAA 1 cut(s) 682
BstC8I GCNNGC 3 cut(s) 246, 988, 1346
BstDEI CTNAG 5 cut(s) 410, 503, 713, 1096, 1274
BstDSI CCRYGG 3 cut(s) 322, 462, 723
BstF5I GGATG 2 cut(s) 770, 1186
BstFNI CGCG 2 cut(s) 1176, 1209
BstHHI GCGC 2 cut(s) 893, 1176
BstKTI GATC 6 cut(s) 216, 511, 882, 952, 1162, 1231
BstMAI GTCTC 2 cut(s) 380, 724
BstMBI GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
BstMCI CGRYCG 1 cut(s) 1162
BstMWI GCNNNNNNNGC 3 cut(s) 813, 933, 1182
BstNI CCWGG 1 cut(s) 369
BstNSI RCATGY 1 cut(s) 1348
BstSCI CCNGG 2 cut(s) 367, 830
BstSNI TACGTA 1 cut(s) 961
BstUI CGCG 2 cut(s) 1176, 1209
BstV1I GCAGC 3 cut(s) 245, 734, 1303
BstV2I GAAGAC 1 cut(s) 111
BstX2I RGATCY 1 cut(s) 879
BstYI RGATCY 1 cut(s) 879
BsuI GTATCC 1 cut(s) 1158
BsuRI GGCC 3 cut(s) 84, 321, 708
BtgI CCRYGG 3 cut(s) 322, 462, 723
BtgZI GCGATG 1 cut(s) 861
BtrI CACGTC 1 cut(s) 871
BtsCI GGATG 2 cut(s) 770, 1186
BtsIMutI CAGTG 2 cut(s) 511, 1263
BveI ACCTGC 1 cut(s) 97
Cac8I GCNNGC 3 cut(s) 246, 988, 1346
CciI TCATGA 1 cut(s) 952
CfoI GCGC 2 cut(s) 893, 1176
CseI GACGC 2 cut(s) 17, 273
Csp6I GTAC 6 cut(s) 141, 695, 958, 962, 1084, 1372
CviAII CATG 7 cut(s) 51, 323, 622, 781, 953, 1152, 1345
CviQI GTAC 6 cut(s) 141, 695, 958, 962, 1084, 1372
DdeI CTNAG 5 cut(s) 410, 503, 713, 1096, 1274
DpnI GATC 6 cut(s) 215, 510, 881, 951, 1161, 1230
DpnII GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
EaeI YGGCCR 1 cut(s) 706
Eam1104I CTCTTC 1 cut(s) 727
EarI CTCTTC 1 cut(s) 727
Eco105I TACGTA 1 cut(s) 961
Eco130I CCWWGG 2 cut(s) 322, 903
EcoRII CCWGG 1 cut(s) 367
EcoT14I CCWWGG 2 cut(s) 322, 903
EcoT22I ATGCAT 2 cut(s) 300, 1346
ErhI CCWWGG 2 cut(s) 322, 903
FaeI CATG 7 cut(s) 54, 326, 625, 784, 956, 1155, 1348
FaqI GGGAC 3 cut(s) 349, 586, 1068
FatI CATG 7 cut(s) 50, 322, 621, 780, 952, 1151, 1344
FauI CCCGC 2 cut(s) 1169, 1202
Fnu4HI GCNGC 5 cut(s) 234, 488, 748, 928, 1317
FokI GGATG 2 cut(s) 777, 1193
Fsp4HI GCNGC 5 cut(s) 234, 488, 748, 928, 1317
FspBI CTAG 5 cut(s) 245, 516, 564, 1328, 1375
GlaI GCGC 2 cut(s) 892, 1175
GluI GCNGC 5 cut(s) 234, 488, 748, 928, 1317
GsaI CCCAGC 2 cut(s) 1029, 1151
GsuI CTGGAG 1 cut(s) 1131
HaeIII GGCC 3 cut(s) 84, 321, 708
HapII CCGG 2 cut(s) 198, 831
HgaI GACGC 2 cut(s) 17, 273
HhaI GCGC 2 cut(s) 893, 1176
Hin1II CATG 7 cut(s) 54, 326, 625, 784, 956, 1155, 1348
Hin6I GCGC 2 cut(s) 891, 1174
HinP1I GCGC 2 cut(s) 891, 1174
HindIII AAGCTT 1 cut(s) 418
HinfI GANTC 9 cut(s) 311, 356, 595, 717, 916, 1100, 1214, 1221, 1293
HpaII CCGG 2 cut(s) 198, 831
HphI GGTGA 1 cut(s) 63
Hpy188I TCNGA 8 cut(s) 124, 310, 716, 755, 1099, 1164, 1228, 1298
Hpy188III TCNNGA 6 cut(s) 176, 388, 479, 552, 953, 1218
Hpy99I CGWCG 3 cut(s) 33, 872, 1143
HpyAV CCTTC 4 cut(s) 405, 449, 832, 836
HpyCH4III ACNGT 2 cut(s) 145, 727
HpyCH4IV ACGT 4 cut(s) 57, 204, 870, 960
HpyF10VI GCNNNNNNNGC 3 cut(s) 813, 933, 1182
HpyF3I CTNAG 5 cut(s) 410, 503, 713, 1096, 1274
HpySE526I ACGT 4 cut(s) 57, 204, 870, 960
Hsp92II CATG 7 cut(s) 54, 326, 625, 784, 956, 1155, 1348
HspAI GCGC 2 cut(s) 891, 1174
Kzo9I GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
LmnI GCTCC 1 cut(s) 1324
Lsp1109I GCAGC 3 cut(s) 245, 734, 1303
LweI GCATC 1 cut(s) 973
MaeI CTAG 5 cut(s) 245, 516, 564, 1328, 1375
MaeII ACGT 4 cut(s) 57, 204, 870, 960
MaeIII GTNAC 3 cut(s) 69, 818, 1304
MalI GATC 6 cut(s) 215, 510, 881, 951, 1161, 1230
MboI GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
MfeI CAATTG 1 cut(s) 585
MflI RGATCY 1 cut(s) 879
MlsI TGGCCA 1 cut(s) 708
MluNI TGGCCA 1 cut(s) 708
MlyI GAGTC 3 cut(s) 726, 1094, 1223
MmeI TCCRAC 3 cut(s) 147, 354, 709
Mox20I TGGCCA 1 cut(s) 708
Mph1103I ATGCAT 2 cut(s) 300, 1346
MroXI GAANNNNTTC 1 cut(s) 183
MscI TGGCCA 1 cut(s) 708
MseI TTAA 3 cut(s) 267, 885, 1038
Msp20I TGGCCA 1 cut(s) 708
MspI CCGG 2 cut(s) 198, 831
MspR9I CCNGG 2 cut(s) 369, 832
MunI CAATTG 1 cut(s) 585
Mva1269I GAATGC 3 cut(s) 298, 868, 1346
MvaI CCWGG 1 cut(s) 369
MvnI CGCG 2 cut(s) 1176, 1209
MwoI GCNNNNNNNGC 3 cut(s) 813, 933, 1182
NciI CCSGG 1 cut(s) 832
NcoI CCATGG 1 cut(s) 322
NdeII GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
NheI GCTAGC 1 cut(s) 244
NlaIII CATG 7 cut(s) 54, 326, 625, 784, 956, 1155, 1348
NlaIV GGNNCC 1 cut(s) 328
NmeAIII GCCGAG 1 cut(s) 520
NmuCI GTSAC 2 cut(s) 69, 818
NsiI ATGCAT 2 cut(s) 300, 1346
NspI RCATGY 1 cut(s) 1348
NspV TTCGAA 1 cut(s) 682
PaeI GCATGC 1 cut(s) 1348
PagI TCATGA 1 cut(s) 952
PaqCI CACCTGC 1 cut(s) 97
PctI GAATGC 3 cut(s) 298, 868, 1346
PdmI GAANNNNTTC 1 cut(s) 183
PfeI GAWTC 6 cut(s) 311, 356, 595, 916, 1221, 1293
PkrI GCNGC 5 cut(s) 235, 489, 749, 929, 1318
Ple19I CGATCG 1 cut(s) 1162
PleI GAGTC 3 cut(s) 725, 1094, 1222
PpsI GAGTC 3 cut(s) 725, 1094, 1222
Ppu21I YACGTR 1 cut(s) 961
PsiI TTATAA 1 cut(s) 638
Psp1406I AACGTT 1 cut(s) 204
Psp6I CCWGG 1 cut(s) 367
PspFI CCCAGC 2 cut(s) 1025, 1147
PspGI CCWGG 1 cut(s) 367
PspN4I GGNNCC 1 cut(s) 328
PsuI RGATCY 1 cut(s) 879
PvuI CGATCG 1 cut(s) 1162
RsaI GTAC 6 cut(s) 142, 696, 959, 963, 1085, 1373
RsaNI GTAC 6 cut(s) 141, 695, 958, 962, 1084, 1372
SaqAI TTAA 3 cut(s) 267, 885, 1038
SatI GCNGC 5 cut(s) 234, 488, 748, 928, 1317
Sau3AI GATC 6 cut(s) 213, 508, 879, 949, 1159, 1228
ScaI AGTACT 2 cut(s) 1085, 1373
SchI GAGTC 3 cut(s) 726, 1094, 1223
ScrFI CCNGG 2 cut(s) 369, 832
SfaNI GCATC 1 cut(s) 973
SfuI TTCGAA 1 cut(s) 682
SmlI CTYRAG 3 cut(s) 190, 443, 613
SmoI CTYRAG 3 cut(s) 190, 443, 613
SnaBI TACGTA 1 cut(s) 961
SpeI ACTAGT 2 cut(s) 515, 563
SphI GCATGC 1 cut(s) 1348
SsiI CCGC 6 cut(s) 487, 631, 925, 928, 1176, 1209
SspI AATATT 1 cut(s) 7
SspMI CTAG 5 cut(s) 245, 516, 564, 1328, 1375
StyD4I CCNGG 2 cut(s) 367, 830
StyI CCWWGG 2 cut(s) 322, 903
TaaI ACNGT 2 cut(s) 145, 727
TaiI ACGT 4 cut(s) 60, 207, 873, 963
TaqI TCGA 3 cut(s) 216, 682, 1217
TatI WGTACW 2 cut(s) 1083, 1371
TauI GCSGC 2 cut(s) 490, 930
TfiI GAWTC 6 cut(s) 311, 356, 595, 916, 1221, 1293
Tru1I TTAA 3 cut(s) 267, 885, 1038
Tru9I TTAA 3 cut(s) 267, 885, 1038
TscAI CASTG 2 cut(s) 511, 1263
TseFI GTSAC 2 cut(s) 69, 818
TseI GCWGC 3 cut(s) 233, 747, 1316
Tsp45I GTSAC 2 cut(s) 69, 818
TspDTI ATGAA 7 cut(s) 12, 17, 240, 303, 588, 638, 993
TspRI CASTG 2 cut(s) 511, 1263
XapI RAATTY 3 cut(s) 467, 575, 1331
XceI RCATGY 1 cut(s) 1348
XcmI CCANNNNNNNNNTGG 1 cut(s) 237
XmnI GAANNNNTTC 1 cut(s) 183
XspI CTAG 5 cut(s) 245, 516, 564, 1328, 1375
ZrmI AGTACT 2 cut(s) 1085, 1373
Zsp2I ATGCAT 2 cut(s) 300, 1346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.