RLG00000018160

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
26227284 .. 26230433
3150 bp
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UTR
Exon/CDS
Intron
RLM00000018160

Sequence Viewer

Length: 1647 bp
ATGTCTTCCCCTGGTGGAGATGCCGACCTCGATATGACCAAAGCCACCGATACCGTCATCATCACCAGCGACACCGCCACCACACCTGATAGCTCCGTCAAGAACGAAAAGAAAAAGAAGTCTATCATTCCTAGACTTTTTGGTGCAAAGCGAACCGGGCGTGAAAGCTCAGAATCAGATGGTGATGGAGATCTCGAAAGACATACAAGTCCGGGGATTCAAAGCCTAAACCTATCAAACTTTGAACAACACTCTATGTTGCCATCAATTGAGACTAAAGAATTCAGGATATTCGTGGCCACATGGAATGTAGGAGGAAAGTCTCCCAACAATGGCCTCAACCTTGAAGATTTCTTGCAGGTCGAAGGCTCTTCAGACATCTATGTGTTAGGGTTTCAGGAAATCGTACCTTTAAGTGCTGGAAACGTTTTAGTGATCGAGGACAACGAACCAGCTGCAAAATGGCTAACCCTTATAAGCCAAGCCCTAAATAAACCCCAGAATGCTTGCACCAATACGTTTTGTTGTTCTTCAGATTCTTCGAGTCATGGTTCCAACAAGTCCTCACATAACAAGGAATCCAAGTCCCCAGGCAGTCTCAACTTCTTTCAGAAGCCTTCTCTCAAAGTTATCAGCAAAAGCTTCAGGGCAGATAGTAGAATTCTCAAGTCTTGTAACTGCCCCTTGGAATTTCCATCTCGTGAAAGACGGCGGCTAAGAAAACTCAGTGATCCTGCAGATAGTAAATTAGACTCCTCATATGGTTCTTGTGATGGTAGGGTAGACGAATTTCTTGCAACTGCAGGGTTACAATCTCTGCCTTCCTCCGAGATGAGTTACTCTCTCATAACGAGCAAGAAGATGGTAGGGATTTTCGTATCAGTTTGGGTTCGAAGAGAGTTAATACAACACGTTGGCCATCTTAGAGTTTCTACAGTGGGAAGGGGAATAATGGGTTGCCTTGGAAATAAGGGATGCATATCAATAAGCATGACGTTGCACCAAACAAGCTTTTGTTTCGTGTGCAGTCACTTGGCTTCCGGCGAGAAGGAAGGCGATGAACTGAAGAGGAATGCGGATGTGGTGGAGATCCTGAAGGGCACACAATTCCCCAAGATTTGCAAGAATCCAAATCGTCTTCCTTGCGAAAGAATAGTTGACCATGATCGGGTAATATGGCTAGGAGATTTGAATTACCGGGTGGCTTTGAGCTATGAAGAAACTAGGGTTTTGTTGGAGGACAATGATTGGGATGCACTTCTAGAGAAAGATCAGTTGAATATAGAGAGAGAAGCTGGGAGAGTATTCGATGGGTTTAAAGAAGGACAAATCTACTTTGCCCCCACTTACAAGTATTCCCATAATTCAGACTCTTACGCAGGAGAAACTGCCAAGTCCAAGAAGAAACGACGAACCCCTGCATGGTGTGATAGGATACTATGGCGCGGTGAAGGTTTCGAACAGTTGTCCTATATCCGGGGTGAATCGAGATTCTCCGATCACAGACCTGTTTGTGCTGTGTTTTCAGTTGAAGTGAACTTACTTAGAAGCAAAAACAACAGATTTAGAAAGGGTTACTCGTGTGCTGCTCCAAGATTCGAATTTGATGCCTGCATGCCTCAAAGACACAGCTTCTACGAGTTCTAA

Protein Analysis

549

Amino Acids

61.37

Weight (kDa)

8.23

Isoelectric Point (pI)

51.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos2 PF22669 101 - 168 3.1e-06 Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2 PF22669 272 - 506 1.9e-65 Endonuclease/Exonuclease/phosphatase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012202)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 476
AasI GACNNNNNNGTC 1 cut(s) 207
Acc36I ACCTGC 1 cut(s) 349
AccI GTMKAC 1 cut(s) 783
AccII CGCG 1 cut(s) 1446
AciI CCGC 4 cut(s) 75, 712, 1076, 1446
AclI AACGTT 1 cut(s) 426
AclWI GGATC 2 cut(s) 725, 1084
AcoI YGGCCR 2 cut(s) 297, 916
AcsI RAATTY 5 cut(s) 281, 660, 689, 788, 1601
AcuI CTGAAG 5 cut(s) 357, 516, 628, 1085, 1115
AfaI GTAC 1 cut(s) 408
AfiI CCNNNNNNNGG 4 cut(s) 332, 1168, 1422, 1476
AflIII ACRYGT 1 cut(s) 910
AgsI TTSAA 6 cut(s) 221, 245, 347, 1192, 1279, 1532
AjnI CCWGG 2 cut(s) 10, 589
AluBI AGCT 8 cut(s) 93, 168, 455, 642, 1011, 1212, 1295, 1632
AluI AGCT 8 cut(s) 93, 168, 455, 642, 1011, 1212, 1295, 1632
Alw26I GTCTC 3 cut(s) 266, 327, 602
AlwI GGATC 2 cut(s) 725, 1084
AoxI GGCC 3 cut(s) 297, 334, 916
ApeKI GCWGC 2 cut(s) 455, 1586
ApoI RAATTY 5 cut(s) 281, 660, 689, 788, 1601
AspLEI GCGC 1 cut(s) 1446
AsuC2I CCSGG 4 cut(s) 157, 213, 1199, 1478
AsuHPI GGTGA 4 cut(s) 55, 194, 1460, 1493
AsuII TTCGAA 3 cut(s) 892, 1458, 1599
BaeGI GKGCMC 1 cut(s) 1103
BalI TGGCCA 2 cut(s) 299, 918
BarI GAAGNNNNNNTAC 2 cut(s) 1524, 1556
BauI CACGAG 2 cut(s) 699, 1579
BbsI GAAGAC 1 cut(s) 1130
BbvI GCAGC 2 cut(s) 442, 1573
BccI CCATC 8 cut(s) 173, 179, 271, 703, 767, 856, 927, 1304
BceAI ACGGC 1 cut(s) 725
BcgI CGANNNNNNTGC 6 cut(s) 437, 471, 776, 810, 1589, 1623
BciT130I CCWGG 2 cut(s) 12, 591
BciVI GTATCC 1 cut(s) 1428
BcnI CCSGG 4 cut(s) 157, 213, 1199, 1478
BcoDI GTCTC 3 cut(s) 266, 327, 602
BfaI CTAG 4 cut(s) 132, 1181, 1224, 1262
BfmI CTRYAG 3 cut(s) 735, 801, 933
BfuAI ACCTGC 1 cut(s) 349
BfuI GTATCC 1 cut(s) 1428
BglII AGATCT 1 cut(s) 190
BisI GCNGC 3 cut(s) 456, 713, 1587
BlsI GCNGC 3 cut(s) 457, 714, 1588
Bme1390I CCNGG 6 cut(s) 12, 157, 213, 591, 1199, 1478
BmiI GGNNCC 1 cut(s) 553
BmrFI CCNGG 6 cut(s) 12, 157, 213, 591, 1199, 1478
BmsI GCATC 4 cut(s) 10, 965, 1243, 1597
BpiI GAAGAC 1 cut(s) 1130
BplI GAGNNNNNCTC 2 cut(s) 826, 858
Bpu14I TTCGAA 3 cut(s) 892, 1458, 1599
BpuEI CTTGAG 1 cut(s) 650
BpuMI CCSGG 4 cut(s) 157, 213, 1199, 1478
BsaBI GATNNNNATC 2 cut(s) 189, 979
BsaJI CCNNGG 6 cut(s) 10, 212, 589, 684, 961, 1477
Bsc4I CCNNNNNNNGG 4 cut(s) 332, 1168, 1422, 1476
Bse8I GATNNNNATC 2 cut(s) 189, 979
BseBI CCWGG 2 cut(s) 12, 591
BseDI CCNNGG 6 cut(s) 10, 212, 589, 684, 961, 1477
BseGI GGATG 3 cut(s) 980, 1084, 1258
BseJI GATNNNNATC 2 cut(s) 189, 979
BseLI CCNNNNNNNGG 4 cut(s) 332, 1168, 1422, 1476
BseMII CTCAG 2 cut(s) 183, 739
BseRI GAGGAG 1 cut(s) 745
BseSI GKGCMC 1 cut(s) 1103
BseXI GCAGC 2 cut(s) 442, 1573
BseYI CCCAGC 1 cut(s) 1295
BsgI GTGCAG 1 cut(s) 1045
Bsh1236I CGCG 1 cut(s) 1446
BshFI GGCC 3 cut(s) 299, 336, 918
BsiSI CCGG 5 cut(s) 156, 212, 1041, 1198, 1477
BslFI GGGAC 1 cut(s) 571
BslI CCNNNNNNNGG 4 cut(s) 332, 1168, 1422, 1476
BsmAI GTCTC 3 cut(s) 266, 327, 602
BsmFI GGGAC 1 cut(s) 571
BsmI GAATGC 2 cut(s) 508, 1078
BsnI GGCC 3 cut(s) 299, 336, 918
Bsp119I TTCGAA 3 cut(s) 892, 1458, 1599
Bsp1286I GDGCHC 1 cut(s) 1103
Bsp143I GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
BspACI CCGC 4 cut(s) 75, 712, 1076, 1446
BspANI GGCC 3 cut(s) 299, 336, 918
BspCNI CTCAG 2 cut(s) 182, 738
BspFNI CGCG 1 cut(s) 1446
BspLI GGNNCC 1 cut(s) 553
BspMAI CTGCAG 2 cut(s) 739, 805
BspMI ACCTGC 1 cut(s) 349
BspPI GGATC 2 cut(s) 725, 1084
BspQI GCTCTTC 1 cut(s) 376
BspT104I TTCGAA 3 cut(s) 892, 1458, 1599
BssECI CCNNGG 6 cut(s) 10, 212, 589, 684, 961, 1477
BssMI GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
BssSI CACGAG 2 cut(s) 699, 1579
BssT1I CCWWGG 2 cut(s) 684, 961
Bst2BI CACGAG 2 cut(s) 699, 1579
Bst2UI CCWGG 2 cut(s) 12, 591
Bst4CI ACNGT 3 cut(s) 55, 937, 1464
Bst6I CTCTTC 3 cut(s) 376, 889, 1061
BstBI TTCGAA 3 cut(s) 892, 1458, 1599
BstC8I GCNNGC 3 cut(s) 508, 1612, 1616
BstDEI CTNAG 5 cut(s) 169, 716, 725, 923, 1544
BstF5I GGATG 3 cut(s) 980, 1084, 1258
BstFNI CGCG 1 cut(s) 1446
BstHHI GCGC 1 cut(s) 1446
BstKTI GATC 7 cut(s) 193, 438, 733, 1092, 1168, 1273, 1501
BstMAI GTCTC 3 cut(s) 266, 327, 602
BstMBI GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
BstMWI GCNNNNNNNGC 1 cut(s) 157
BstNI CCWGG 2 cut(s) 12, 591
BstNSI RCATGY 1 cut(s) 1618
BstSCI CCNGG 6 cut(s) 10, 155, 211, 589, 1197, 1476
BstSFI CTRYAG 3 cut(s) 735, 801, 933
BstSLI GKGCMC 1 cut(s) 1103
BstUI CGCG 1 cut(s) 1446
BstV1I GCAGC 2 cut(s) 442, 1573
BstV2I GAAGAC 1 cut(s) 1130
BstX2I RGATCY 2 cut(s) 190, 1089
BstYI RGATCY 2 cut(s) 190, 1089
BsuI GTATCC 1 cut(s) 1428
BsuRI GGCC 3 cut(s) 299, 336, 918
BtgZI GCGATG 1 cut(s) 1071
BtsCI GGATG 3 cut(s) 980, 1084, 1258
BtsIMutI CAGTG 2 cut(s) 733, 942
BveI ACCTGC 1 cut(s) 349
Cac8I GCNNGC 3 cut(s) 508, 1612, 1616
CfoI GCGC 1 cut(s) 1446
Csp6I GTAC 1 cut(s) 407
CviAII CATG 6 cut(s) 303, 548, 991, 1163, 1422, 1615
CviQI GTAC 1 cut(s) 407
DdeI CTNAG 5 cut(s) 169, 716, 725, 923, 1544
DpnI GATC 7 cut(s) 192, 437, 732, 1091, 1167, 1272, 1500
DpnII GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
DraI TTTAAA 1 cut(s) 1318
DrdI GACNNNNNNGTC 1 cut(s) 207
DseDI GACNNNNNNGTC 1 cut(s) 207
EaeI YGGCCR 2 cut(s) 297, 916
Eam1104I CTCTTC 3 cut(s) 376, 889, 1061
EarI CTCTTC 3 cut(s) 376, 889, 1061
Eco130I CCWWGG 2 cut(s) 684, 961
Eco57I CTGAAG 5 cut(s) 357, 516, 628, 1085, 1115
EcoRI GAATTC 2 cut(s) 281, 660
EcoRII CCWGG 2 cut(s) 10, 589
EcoT14I CCWWGG 2 cut(s) 684, 961
EcoT22I ATGCAT 1 cut(s) 980
ErhI CCWWGG 2 cut(s) 684, 961
FaeI CATG 6 cut(s) 306, 551, 994, 1166, 1425, 1618
FaqI GGGAC 1 cut(s) 571
FatI CATG 6 cut(s) 302, 547, 990, 1162, 1421, 1614
FauNDI CATATG 1 cut(s) 760
FblI GTMKAC 1 cut(s) 783
Fnu4HI GCNGC 3 cut(s) 456, 713, 1587
FokI GGATG 3 cut(s) 987, 1091, 1265
Fsp4HI GCNGC 3 cut(s) 456, 713, 1587
FspBI CTAG 4 cut(s) 132, 1181, 1224, 1262
GlaI GCGC 1 cut(s) 1445
GluI GCNGC 3 cut(s) 456, 713, 1587
GsaI CCCAGC 1 cut(s) 1299
HaeIII GGCC 3 cut(s) 299, 336, 918
HapII CCGG 5 cut(s) 156, 212, 1041, 1198, 1477
HhaI GCGC 1 cut(s) 1446
Hin1II CATG 6 cut(s) 306, 551, 994, 1166, 1425, 1618
Hin6I GCGC 1 cut(s) 1444
HinP1I GCGC 1 cut(s) 1444
HincII GTYRAC 1 cut(s) 1159
HindII GTYRAC 1 cut(s) 1159
HindIII AAGCTT 2 cut(s) 640, 1009
HpaII CCGG 5 cut(s) 156, 212, 1041, 1198, 1477
HphI GGTGA 4 cut(s) 55, 194, 1460, 1493
Hpy166II GTNNAC 3 cut(s) 784, 1159, 1537
Hpy188I TCNGA 8 cut(s) 172, 178, 376, 535, 612, 829, 1369, 1498
Hpy188III TCNNGA 8 cut(s) 100, 194, 286, 398, 701, 1093, 1262, 1488
Hpy8I GTNNAC 3 cut(s) 784, 1159, 1537
Hpy99I CGWCG 1 cut(s) 1413
HpyAV CCTTC 9 cut(s) 359, 627, 831, 936, 1042, 1046, 1090, 1316, 1445
HpyCH4III ACNGT 3 cut(s) 55, 937, 1464
HpyCH4IV ACGT 4 cut(s) 426, 518, 912, 995
HpyF10VI GCNNNNNNNGC 1 cut(s) 157
HpyF3I CTNAG 5 cut(s) 169, 716, 725, 923, 1544
HpySE526I ACGT 4 cut(s) 426, 518, 912, 995
Hsp92II CATG 6 cut(s) 306, 551, 994, 1166, 1425, 1618
HspAI GCGC 1 cut(s) 1444
Kzo9I GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
LguI GCTCTTC 1 cut(s) 376
LmnI GCTCC 2 cut(s) 98, 1594
Lsp1109I GCAGC 2 cut(s) 442, 1573
LweI GCATC 4 cut(s) 10, 965, 1243, 1597
MaeI CTAG 4 cut(s) 132, 1181, 1224, 1262
MaeII ACGT 4 cut(s) 426, 518, 912, 995
MaeIII GTNAC 5 cut(s) 674, 807, 836, 1028, 1574
MalI GATC 7 cut(s) 192, 437, 732, 1091, 1167, 1272, 1500
MboI GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
MfeI CAATTG 1 cut(s) 267
MflI RGATCY 2 cut(s) 190, 1089
MhlI GDGCHC 1 cut(s) 1103
MlsI TGGCCA 2 cut(s) 299, 918
MluNI TGGCCA 2 cut(s) 299, 918
MlyI GAGTC 3 cut(s) 553, 746, 1364
MmeI TCCRAC 2 cut(s) 579, 1215
Mox20I TGGCCA 2 cut(s) 299, 918
Mph1103I ATGCAT 1 cut(s) 980
MscI TGGCCA 2 cut(s) 299, 918
MseI TTAA 3 cut(s) 413, 902, 1317
MslI CAYNNNNRTG 1 cut(s) 383
Msp20I TGGCCA 2 cut(s) 299, 918
MspA1I CMGCKG 1 cut(s) 455
MspI CCGG 5 cut(s) 156, 212, 1041, 1198, 1477
MspR9I CCNGG 6 cut(s) 12, 157, 213, 591, 1199, 1478
MunI CAATTG 1 cut(s) 267
Mva1269I GAATGC 2 cut(s) 508, 1078
MvaI CCWGG 2 cut(s) 12, 591
MvnI CGCG 1 cut(s) 1446
MwoI GCNNNNNNNGC 1 cut(s) 157
NciI CCSGG 4 cut(s) 157, 213, 1199, 1478
NdeI CATATG 1 cut(s) 760
NdeII GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
NlaIII CATG 6 cut(s) 306, 551, 994, 1166, 1425, 1618
NlaIV GGNNCC 1 cut(s) 553
NmuCI GTSAC 1 cut(s) 1028
NsiI ATGCAT 1 cut(s) 980
NspI RCATGY 1 cut(s) 1618
NspV TTCGAA 3 cut(s) 892, 1458, 1599
PaeI GCATGC 1 cut(s) 1618
PciSI GCTCTTC 1 cut(s) 376
PcsI WCGNNNNNNNCGW 1 cut(s) 444
PctI GAATGC 2 cut(s) 508, 1078
PfeI GAWTC 8 cut(s) 173, 217, 536, 578, 1126, 1484, 1491, 1596
PkrI GCNGC 3 cut(s) 457, 714, 1588
PleI GAGTC 3 cut(s) 552, 746, 1364
PpsI GAGTC 3 cut(s) 552, 746, 1364
PsiI TTATAA 1 cut(s) 476
Psp1406I AACGTT 1 cut(s) 426
Psp6I CCWGG 2 cut(s) 10, 589
PspFI CCCAGC 1 cut(s) 1295
PspGI CCWGG 2 cut(s) 10, 589
PspN4I GGNNCC 1 cut(s) 553
PstI CTGCAG 2 cut(s) 739, 805
PsuI RGATCY 2 cut(s) 190, 1089
PvuII CAGCTG 1 cut(s) 455
RsaI GTAC 1 cut(s) 408
RsaNI GTAC 1 cut(s) 407
RseI CAYNNNNRTG 1 cut(s) 383
SapI GCTCTTC 1 cut(s) 376
SaqAI TTAA 3 cut(s) 413, 902, 1317
SatI GCNGC 3 cut(s) 456, 713, 1587
Sau3AI GATC 7 cut(s) 190, 435, 730, 1089, 1165, 1270, 1498
SchI GAGTC 3 cut(s) 553, 746, 1364
ScrFI CCNGG 6 cut(s) 12, 157, 213, 591, 1199, 1478
SduI GDGCHC 1 cut(s) 1103
SfaNI GCATC 4 cut(s) 10, 965, 1243, 1597
SfcI CTRYAG 3 cut(s) 735, 801, 933
SfuI TTCGAA 3 cut(s) 892, 1458, 1599
SmiMI CAYNNNNRTG 1 cut(s) 383
SmlI CTYRAG 1 cut(s) 665
SmoI CTYRAG 1 cut(s) 665
SphI GCATGC 1 cut(s) 1618
SsiI CCGC 4 cut(s) 75, 712, 1076, 1446
SspMI CTAG 4 cut(s) 132, 1181, 1224, 1262
StyD4I CCNGG 6 cut(s) 10, 155, 211, 589, 1197, 1476
StyI CCWWGG 2 cut(s) 684, 961
TaaI ACNGT 3 cut(s) 55, 937, 1464
TaiI ACGT 4 cut(s) 429, 521, 915, 998
TauI GCSGC 1 cut(s) 715
TfiI GAWTC 8 cut(s) 173, 217, 536, 578, 1126, 1484, 1491, 1596
Tru1I TTAA 3 cut(s) 413, 902, 1317
Tru9I TTAA 3 cut(s) 413, 902, 1317
TscAI CASTG 2 cut(s) 733, 942
TseFI GTSAC 1 cut(s) 1028
TseI GCWGC 2 cut(s) 455, 1586
Tsp45I GTSAC 1 cut(s) 1028
TspDTI ATGAA 2 cut(s) 1074, 1230
TspGWI ACGGA 1 cut(s) 85
TspRI CASTG 2 cut(s) 733, 942
XapI RAATTY 5 cut(s) 281, 660, 689, 788, 1601
XbaI TCTAGA 1 cut(s) 1261
XceI RCATGY 1 cut(s) 1618
XcmI CCANNNNNNNNNTGG 1 cut(s) 459
XmiI GTMKAC 1 cut(s) 783
XspI CTAG 4 cut(s) 132, 1181, 1224, 1262
Zsp2I ATGCAT 1 cut(s) 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.