Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0012202

Physical Location & Seq

Genomic Coordinates Reverse (-)

27927504 .. 27932583

Gene Structure 5080 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG260400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGTCTTCCCCTGGTGGAGATGCCAACCTCGATATGACCAAAGCCACCGACACCGTCATCATCACCAGCGACACCGCCAACACACCTGATAGTTCCGTCAAGAACGAAAAGAAAAAGAAGTCTATCATTCCTAGACTTTTTGGTGCAAAGCGAACCGCGCGTGAAAGCTCAGAATCAGATGGTGATGGAGATCTCGATTTGGAGAAAAAGATTGAAGAAAGGAAAAAAGCTTTCATGGAGGCAGCCCCAATGATGAGAAAGAGTTTTTCAGAAAGACATACAAGTCCGGGGATTCAAAGCCTAAACCTATCAAACTTTGAACAACACTCTATGTTGCCATCAATTGAGACTAAAGAATTCAGGATATTCGTGGCCACATGGAATGTAGGAGGAAAGTCTCCCAACAATGGCCTCAACCTTGAAGATTTCTTGCAGGTCGAAGGCTCTTCAGACATCTATGTGTTAGGGTTTCAGGAAATCGTCCCTTTAAGTGCTGGAAACGTGTTAGTGATCGAGGACAACGAACCAGCTGCAAAATGGCTAACCCTTATAAGCCAAGCCCTAAATAAACCCCAGAATGCGTGCACCAATACGTTTTGTTGTTCTTCAGATTCTTCGAGTCATGGTTCCAATAAGTCCTCACATAACAAGGAATCCAAGTCCCCGGGCAGTCTCAACTTCTTTCAGAAGCCTTCTCTCAAAGTTATCAGCAAAAGCTTCAGGGCAGACAGTAGAATTCTCAAGTCTTGTAACTGCCCCTTTGAATTTCCATCTCGTGAAAGACGGCGGCTAAGAAAACTCAGTGATCCTGCAGATAGTAAAGTAGACTCCTCATATGGTTCTTGTGATGGTAGGGTAGACGAATTTCTTGCAACTGCAGGGTTACAATCGCTGCCTTCCTCCGAGATGAGTTACTCTCTCATAACAAGCAAGAAGATGGTAGGGATTTTCGTATCAGTTTGGGTTCGAAGAGAGTTAGTACAACACGTTGGCCATCTTAGAGTTTCTACCGTGGGAAGAGGAATAATGGGTTGCCTTGGAAATAAGGGATGCATATCAATAAGCATGACGTTGCACCAAACAAGCTTTTGTTTCGTGTGCAGTCACTTGGCTTCCGGCGAGAAGGAAGGCGATGAACTGAAGAGGAATGCGGATGTGGTGGAGATCCTGAAGGGCACACAATTCCCCAAGATTTGCAAGAATCCAAATCGTCTTCCTTGCGAAAGAATAGTTGACCATGATCGGGTAATATGGCTAGGAGATTTGAATTATCGGGTGGCTTTGAGCTATGAAGAAACTAGGGTTTTGTTGGAGGACAATGATTGGGATGCACTTCTAGAGAAAGATCAGTTGAATATAGAGAGAGAAGCTGGGAGAGTATTTGATGGGTTCAAAGAGGGACAAATCTACTTTGCCCCCACTTATAAGTATTCCCATAATTCAGACTCTTACGCAGGAGAAACTGCCAAGTCCAAGAAGAAACGACGAACCCCTGCATGGTGTGATAGGATACTATGGCGCGGTGAAGGTTTCGAACAGTTGTCCTATATCCGGGGTGAATCGAGATTCTCCGATCACAGACCTGTTTGTGCTGTGTTTTCAGTTGAAGTGAACTTACTTAGAAGCAAAAACAACAGATTCAGAAAGGGTTACTCGTGTGCTGCTCCAAGATTCGAATTTGATGCCTGCATGCCTCAAAGACACAGCTTCTATGAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0004439 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016043 GO:0016049 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0021700 GO:0022622 GO:0030154 GO:0030258 GO:0032501 GO:0032502 GO:0032989 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0040007 GO:0042578 GO:0044237 GO:0044238 GO:0044255 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048364 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0052866 GO:0060560 GO:0071695 GO:0071704 GO:0071840 GO:0090558 GO:0090627 GO:0099402 GO:0106019 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

573

Amino Acids

64.39

Weight (kDa)

8.55

Isoelectric Point (pI)

51.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	126 - 193	3.3e-06	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	297 - 531	2.9e-65	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65090 AT5G65090 AT5G65090
fragaria_vesca	FvH4_1g21290 FvH4_1g21290 FvH4_1g21290
malus_domestica	MD15G1327400.v1.1
prunus_persica	Prupe.6G181500_v2.0.a1
pyrus_communis	pycom15g29890
rosa_chinensis	RchiOBHm_Chr2g0115121
rosa_laevigata	RLG00000018160
rosa_multiflora	Rmu_sc0002784.1_g000011
rosa_roxburghii	Rroxscaffold_2G00130600
rosa_rugosa	Rorug02G0193800
rosa_samantha	Rh2AG252200 Rh2BG261800 Rh2CG256800 Rh2DG260400
rosa_wichuraiana	Rw2G019670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	551, 1425
AasI	GACNNNNNNGTC	1 cut(s)	282
Acc36I	ACCTGC	1 cut(s)	424
AccI	GTMKAC	2 cut(s)	825, 858
AccII	CGCG	3 cut(s)	158, 160, 1521
AciI	CCGC	5 cut(s)	75, 156, 787, 1151, 1521
AclWI	GGATC	2 cut(s)	800, 1159
AcoI	YGGCCR	2 cut(s)	372, 991
AcsI	RAATTY	5 cut(s)	356, 735, 764, 863, 1676
AcuI	CTGAAG	5 cut(s)	432, 591, 703, 1160, 1190
AfaI	GTAC	1 cut(s)	981
AfiI	CCNNNNNNNGG	4 cut(s)	407, 1243, 1497, 1551
AflIII	ACRYGT	2 cut(s)	501, 985
AgsI	TTSAA	9 cut(s)	215, 296, 320, 422, 764, 1267, 1354, 1393, 1607
AjnI	CCWGG	1 cut(s)	10
AluBI	AGCT	8 cut(s)	168, 230, 530, 717, 1086, 1287, 1370, 1707
AluI	AGCT	8 cut(s)	168, 230, 530, 717, 1086, 1287, 1370, 1707
Alw21I	GWGCWC	1 cut(s)	587
Alw26I	GTCTC	3 cut(s)	341, 402, 677
Alw44I	GTGCAC	1 cut(s)	583
AlwI	GGATC	2 cut(s)	800, 1159
Ama87I	CYCGRG	1 cut(s)	664
AoxI	GGCC	3 cut(s)	372, 409, 991
ApaLI	GTGCAC	1 cut(s)	583
ApeKI	GCWGC	4 cut(s)	242, 530, 892, 1661
ApoI	RAATTY	5 cut(s)	356, 735, 764, 863, 1676
AspLEI	GCGC	2 cut(s)	160, 1521
AsuC2I	CCSGG	4 cut(s)	288, 665, 666, 1553
AsuHPI	GGTGA	4 cut(s)	55, 194, 1535, 1568
AsuII	TTCGAA	3 cut(s)	967, 1533, 1674
AvaI	CYCGRG	1 cut(s)	664
BaeGI	GKGCMC	2 cut(s)	587, 1178
BalI	TGGCCA	2 cut(s)	374, 993
BarI	GAAGNNNNNNTAC	2 cut(s)	1599, 1631
BauI	CACGAG	2 cut(s)	774, 1654
BbsI	GAAGAC	1 cut(s)	1205
Bbv12I	GWGCWC	1 cut(s)	587
BbvI	GCAGC	4 cut(s)	254, 517, 879, 1648
BccI	CCATC	8 cut(s)	173, 179, 346, 778, 842, 931, 1002, 1379
BceAI	ACGGC	1 cut(s)	800
BcgI	CGANNNNNNTGC	6 cut(s)	512, 546, 851, 885, 1664, 1698
BciT130I	CCWGG	1 cut(s)	12
BciVI	GTATCC	1 cut(s)	1503
BcnI	CCSGG	4 cut(s)	288, 665, 666, 1553
BcoDI	GTCTC	3 cut(s)	341, 402, 677
BfaI	CTAG	4 cut(s)	132, 1256, 1299, 1337
BfmI	CTRYAG	2 cut(s)	810, 876
BfuAI	ACCTGC	1 cut(s)	424
BfuI	GTATCC	1 cut(s)	1503
BglII	AGATCT	1 cut(s)	190
BisI	GCNGC	5 cut(s)	243, 531, 788, 893, 1662
BlsI	GCNGC	5 cut(s)	244, 532, 789, 894, 1663
Bme1390I	CCNGG	5 cut(s)	12, 288, 665, 666, 1553
BmeT110I	CYCGRG	1 cut(s)	664
BmiI	GGNNCC	1 cut(s)	628
BmrFI	CCNGG	5 cut(s)	12, 288, 665, 666, 1553
BmsI	GCATC	4 cut(s)	10, 1040, 1318, 1672
BpiI	GAAGAC	1 cut(s)	1205
BplI	GAGNNNNNCTC	2 cut(s)	901, 933
Bpu14I	TTCGAA	3 cut(s)	967, 1533, 1674
BpuEI	CTTGAG	1 cut(s)	725
BpuMI	CCSGG	4 cut(s)	288, 665, 666, 1553
BsaBI	GATNNNNATC	2 cut(s)	189, 1054
BsaJI	CCNNGG	7 cut(s)	10, 287, 663, 664, 1011, 1036, 1552
Bsc4I	CCNNNNNNNGG	4 cut(s)	407, 1243, 1497, 1551
Bse8I	GATNNNNATC	2 cut(s)	189, 1054
BseBI	CCWGG	1 cut(s)	12
BseDI	CCNNGG	7 cut(s)	10, 287, 663, 664, 1011, 1036, 1552
BseGI	GGATG	3 cut(s)	1055, 1159, 1333
BseJI	GATNNNNATC	2 cut(s)	189, 1054
BseLI	CCNNNNNNNGG	4 cut(s)	407, 1243, 1497, 1551
BseMII	CTCAG	2 cut(s)	183, 814
BseRI	GAGGAG	1 cut(s)	820
BseSI	GKGCMC	2 cut(s)	587, 1178
BseXI	GCAGC	4 cut(s)	254, 517, 879, 1648
BseYI	CCCAGC	1 cut(s)	1370
BsgI	GTGCAG	1 cut(s)	1120
Bsh1236I	CGCG	3 cut(s)	158, 160, 1521
BshFI	GGCC	3 cut(s)	374, 411, 993
BsiHKAI	GWGCWC	1 cut(s)	587
BsiHKCI	CYCGRG	1 cut(s)	664
BsiSI	CCGG	4 cut(s)	287, 665, 1116, 1552
BslFI	GGGAC	3 cut(s)	467, 646, 1413
BslI	CCNNNNNNNGG	4 cut(s)	407, 1243, 1497, 1551
BsmAI	GTCTC	3 cut(s)	341, 402, 677
BsmFI	GGGAC	3 cut(s)	467, 646, 1413
BsmI	GAATGC	2 cut(s)	583, 1153
BsnI	GGCC	3 cut(s)	374, 411, 993
BsoBI	CYCGRG	1 cut(s)	664
Bsp119I	TTCGAA	3 cut(s)	967, 1533, 1674
Bsp1286I	GDGCHC	2 cut(s)	587, 1178
Bsp143I	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
BspACI	CCGC	5 cut(s)	75, 156, 787, 1151, 1521
BspANI	GGCC	3 cut(s)	374, 411, 993
BspCNI	CTCAG	2 cut(s)	182, 813
BspFNI	CGCG	3 cut(s)	158, 160, 1521
BspLI	GGNNCC	1 cut(s)	628
BspMAI	CTGCAG	2 cut(s)	814, 880
BspMI	ACCTGC	1 cut(s)	424
BspPI	GGATC	2 cut(s)	800, 1159
BspQI	GCTCTTC	1 cut(s)	451
BspT104I	TTCGAA	3 cut(s)	967, 1533, 1674
BssECI	CCNNGG	7 cut(s)	10, 287, 663, 664, 1011, 1036, 1552
BssMI	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
BssSI	CACGAG	2 cut(s)	774, 1654
BssT1I	CCWWGG	1 cut(s)	1036
Bst2BI	CACGAG	2 cut(s)	774, 1654
Bst2UI	CCWGG	1 cut(s)	12
Bst4CI	ACNGT	4 cut(s)	55, 731, 1012, 1539
Bst6I	CTCTTC	4 cut(s)	451, 964, 1012, 1136
BstBI	TTCGAA	3 cut(s)	967, 1533, 1674
BstC8I	GCNNGC	3 cut(s)	583, 1687, 1691
BstDEI	CTNAG	5 cut(s)	169, 791, 800, 998, 1619
BstDSI	CCRYGG	1 cut(s)	1011
BstF5I	GGATG	3 cut(s)	1055, 1159, 1333
BstFNI	CGCG	3 cut(s)	158, 160, 1521
BstHHI	GCGC	2 cut(s)	160, 1521
BstKTI	GATC	7 cut(s)	193, 513, 808, 1167, 1243, 1348, 1576
BstMAI	GTCTC	3 cut(s)	341, 402, 677
BstMBI	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
BstMWI	GCNNNNNNNGC	1 cut(s)	157
BstNI	CCWGG	1 cut(s)	12
BstNSI	RCATGY	1 cut(s)	1693
BstSCI	CCNGG	5 cut(s)	10, 286, 663, 664, 1551
BstSFI	CTRYAG	2 cut(s)	810, 876
BstSLI	GKGCMC	2 cut(s)	587, 1178
BstUI	CGCG	3 cut(s)	158, 160, 1521
BstV1I	GCAGC	4 cut(s)	254, 517, 879, 1648
BstV2I	GAAGAC	1 cut(s)	1205
BstX2I	RGATCY	2 cut(s)	190, 1164
BstYI	RGATCY	2 cut(s)	190, 1164
BsuI	GTATCC	1 cut(s)	1503
BsuRI	GGCC	3 cut(s)	374, 411, 993
BtgI	CCRYGG	1 cut(s)	1011
BtgZI	GCGATG	1 cut(s)	1146
BtsCI	GGATG	3 cut(s)	1055, 1159, 1333
BtsIMutI	CAGTG	1 cut(s)	808
BveI	ACCTGC	1 cut(s)	424
Cac8I	GCNNGC	3 cut(s)	583, 1687, 1691
CfoI	GCGC	2 cut(s)	160, 1521
Cfr9I	CCCGGG	1 cut(s)	664
Csp6I	GTAC	1 cut(s)	980
CviAII	CATG	7 cut(s)	235, 378, 623, 1066, 1238, 1497, 1690
CviQI	GTAC	1 cut(s)	980
DdeI	CTNAG	5 cut(s)	169, 791, 800, 998, 1619
DpnI	GATC	7 cut(s)	192, 512, 807, 1166, 1242, 1347, 1575
DpnII	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
DrdI	GACNNNNNNGTC	1 cut(s)	282
DseDI	GACNNNNNNGTC	1 cut(s)	282
EaeI	YGGCCR	2 cut(s)	372, 991
Eam1104I	CTCTTC	4 cut(s)	451, 964, 1012, 1136
EarI	CTCTTC	4 cut(s)	451, 964, 1012, 1136
Eco130I	CCWWGG	1 cut(s)	1036
Eco57I	CTGAAG	5 cut(s)	432, 591, 703, 1160, 1190
Eco88I	CYCGRG	1 cut(s)	664
EcoRI	GAATTC	2 cut(s)	356, 735
EcoRII	CCWGG	1 cut(s)	10
EcoT14I	CCWWGG	1 cut(s)	1036
EcoT22I	ATGCAT	1 cut(s)	1055
ErhI	CCWWGG	1 cut(s)	1036
FaeI	CATG	7 cut(s)	238, 381, 626, 1069, 1241, 1500, 1693
FaqI	GGGAC	3 cut(s)	467, 646, 1413
FatI	CATG	7 cut(s)	234, 377, 622, 1065, 1237, 1496, 1689
FauNDI	CATATG	1 cut(s)	835
FblI	GTMKAC	2 cut(s)	825, 858
Fnu4HI	GCNGC	5 cut(s)	243, 531, 788, 893, 1662
FokI	GGATG	3 cut(s)	1062, 1166, 1340
Fsp4HI	GCNGC	5 cut(s)	243, 531, 788, 893, 1662
FspBI	CTAG	4 cut(s)	132, 1256, 1299, 1337
GlaI	GCGC	2 cut(s)	159, 1520
GluI	GCNGC	5 cut(s)	243, 531, 788, 893, 1662
GsaI	CCCAGC	1 cut(s)	1374
HaeIII	GGCC	3 cut(s)	374, 411, 993
HapII	CCGG	4 cut(s)	287, 665, 1116, 1552
HhaI	GCGC	2 cut(s)	160, 1521
Hin1II	CATG	7 cut(s)	238, 381, 626, 1069, 1241, 1500, 1693
Hin6I	GCGC	2 cut(s)	158, 1519
HinP1I	GCGC	2 cut(s)	158, 1519
HincII	GTYRAC	1 cut(s)	1234
HindII	GTYRAC	1 cut(s)	1234
HindIII	AAGCTT	3 cut(s)	228, 715, 1084
HpaII	CCGG	4 cut(s)	287, 665, 1116, 1552
HphI	GGTGA	4 cut(s)	55, 194, 1535, 1568
Hpy166II	GTNNAC	5 cut(s)	585, 826, 859, 1234, 1612
Hpy188III	TCNNGA	8 cut(s)	100, 194, 361, 473, 776, 1168, 1337, 1563
Hpy8I	GTNNAC	5 cut(s)	585, 826, 859, 1234, 1612
Hpy99I	CGWCG	1 cut(s)	1488
HpyAV	CCTTC	7 cut(s)	434, 702, 906, 1117, 1121, 1165, 1520
HpyCH4III	ACNGT	4 cut(s)	55, 731, 1012, 1539
HpyCH4IV	ACGT	4 cut(s)	501, 593, 987, 1070
HpyF10VI	GCNNNNNNNGC	1 cut(s)	157
HpyF3I	CTNAG	5 cut(s)	169, 791, 800, 998, 1619
HpySE526I	ACGT	4 cut(s)	501, 593, 987, 1070
Hsp92II	CATG	7 cut(s)	238, 381, 626, 1069, 1241, 1500, 1693
HspAI	GCGC	2 cut(s)	158, 1519
Kzo9I	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
LguI	GCTCTTC	1 cut(s)	451
LmnI	GCTCC	1 cut(s)	1669
Lsp1109I	GCAGC	4 cut(s)	254, 517, 879, 1648
LweI	GCATC	4 cut(s)	10, 1040, 1318, 1672
MaeI	CTAG	4 cut(s)	132, 1256, 1299, 1337
MaeII	ACGT	4 cut(s)	501, 593, 987, 1070
MaeIII	GTNAC	5 cut(s)	749, 882, 911, 1103, 1649
MalI	GATC	7 cut(s)	192, 512, 807, 1166, 1242, 1347, 1575
MboI	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
MfeI	CAATTG	1 cut(s)	342
MflI	RGATCY	2 cut(s)	190, 1164
MhlI	GDGCHC	2 cut(s)	587, 1178
MlsI	TGGCCA	2 cut(s)	374, 993
MluCI	AATT	9 cut(s)	342, 356, 735, 764, 863, 1181, 1267, 1438, 1676
MluNI	TGGCCA	2 cut(s)	374, 993
MlyI	GAGTC	3 cut(s)	628, 821, 1439
MmeI	TCCRAC	1 cut(s)	1290
Mox20I	TGGCCA	2 cut(s)	374, 993
Mph1103I	ATGCAT	1 cut(s)	1055
MscI	TGGCCA	2 cut(s)	374, 993
MseI	TTAA	1 cut(s)	488
MslI	CAYNNNNRTG	1 cut(s)	458
Msp20I	TGGCCA	2 cut(s)	374, 993
MspA1I	CMGCKG	1 cut(s)	530
MspI	CCGG	4 cut(s)	287, 665, 1116, 1552
MspR9I	CCNGG	5 cut(s)	12, 288, 665, 666, 1553
MunI	CAATTG	1 cut(s)	342
Mva1269I	GAATGC	2 cut(s)	583, 1153
MvaI	CCWGG	1 cut(s)	12
MvnI	CGCG	3 cut(s)	158, 160, 1521
MwoI	GCNNNNNNNGC	1 cut(s)	157
NciI	CCSGG	4 cut(s)	288, 665, 666, 1553
NdeI	CATATG	1 cut(s)	835
NdeII	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
NlaIII	CATG	7 cut(s)	238, 381, 626, 1069, 1241, 1500, 1693
NlaIV	GGNNCC	1 cut(s)	628
NmuCI	GTSAC	1 cut(s)	1103
NsiI	ATGCAT	1 cut(s)	1055
NspI	RCATGY	1 cut(s)	1693
NspV	TTCGAA	3 cut(s)	967, 1533, 1674
PaeI	GCATGC	1 cut(s)	1693
PciSI	GCTCTTC	1 cut(s)	451
PcsI	WCGNNNNNNNCGW	1 cut(s)	519
PctI	GAATGC	2 cut(s)	583, 1153
PfeI	GAWTC	9 cut(s)	173, 292, 611, 653, 1201, 1559, 1566, 1638, 1671
PflFI	GACNNNGTC	1 cut(s)	53
PkrI	GCNGC	5 cut(s)	244, 532, 789, 894, 1663
PleI	GAGTC	3 cut(s)	627, 821, 1439
PpsI	GAGTC	3 cut(s)	627, 821, 1439
PsiI	TTATAA	2 cut(s)	551, 1425
Psp6I	CCWGG	1 cut(s)	10
PspFI	CCCAGC	1 cut(s)	1370
PspGI	CCWGG	1 cut(s)	10
PspN4I	GGNNCC	1 cut(s)	628
PstI	CTGCAG	2 cut(s)	814, 880
PsuI	RGATCY	2 cut(s)	190, 1164
PsyI	GACNNNGTC	1 cut(s)	53
PvuII	CAGCTG	1 cut(s)	530
RsaI	GTAC	1 cut(s)	981
RsaNI	GTAC	1 cut(s)	980
RseI	CAYNNNNRTG	1 cut(s)	458
SapI	GCTCTTC	1 cut(s)	451
SaqAI	TTAA	1 cut(s)	488
SatI	GCNGC	5 cut(s)	243, 531, 788, 893, 1662
Sau3AI	GATC	7 cut(s)	190, 510, 805, 1164, 1240, 1345, 1573
SchI	GAGTC	3 cut(s)	628, 821, 1439
ScrFI	CCNGG	5 cut(s)	12, 288, 665, 666, 1553
SduI	GDGCHC	2 cut(s)	587, 1178
SfaNI	GCATC	4 cut(s)	10, 1040, 1318, 1672
SfcI	CTRYAG	2 cut(s)	810, 876
SfuI	TTCGAA	3 cut(s)	967, 1533, 1674
SmaI	CCCGGG	1 cut(s)	666
SmiMI	CAYNNNNRTG	1 cut(s)	458
SmlI	CTYRAG	1 cut(s)	740
SmoI	CTYRAG	1 cut(s)	740
SphI	GCATGC	1 cut(s)	1693
Sse9I	AATT	9 cut(s)	342, 356, 735, 764, 863, 1181, 1267, 1438, 1676
SsiI	CCGC	5 cut(s)	75, 156, 787, 1151, 1521
SspMI	CTAG	4 cut(s)	132, 1256, 1299, 1337
StyD4I	CCNGG	5 cut(s)	10, 286, 663, 664, 1551
StyI	CCWWGG	1 cut(s)	1036
TaaI	ACNGT	4 cut(s)	55, 731, 1012, 1539
TaiI	ACGT	4 cut(s)	504, 596, 990, 1073
TaqI	TCGA	9 cut(s)	30, 195, 438, 513, 617, 967, 1533, 1562, 1674
TasI	AATT	9 cut(s)	342, 356, 735, 764, 863, 1181, 1267, 1438, 1676
TatI	WGTACW	1 cut(s)	979
TauI	GCSGC	1 cut(s)	790
TfiI	GAWTC	9 cut(s)	173, 292, 611, 653, 1201, 1559, 1566, 1638, 1671
Tru1I	TTAA	1 cut(s)	488
Tru9I	TTAA	1 cut(s)	488
TscAI	CASTG	1 cut(s)	808
TseFI	GTSAC	1 cut(s)	1103
TseI	GCWGC	4 cut(s)	242, 530, 892, 1661
Tsp45I	GTSAC	1 cut(s)	1103
TspDTI	ATGAA	3 cut(s)	223, 1149, 1305
TspGWI	ACGGA	1 cut(s)	85
TspMI	CCCGGG	1 cut(s)	664
TspRI	CASTG	1 cut(s)	808
Tth111I	GACNNNGTC	1 cut(s)	53
VneI	GTGCAC	1 cut(s)	583
XapI	RAATTY	5 cut(s)	356, 735, 764, 863, 1676
XbaI	TCTAGA	1 cut(s)	1336
XceI	RCATGY	1 cut(s)	1693
XcmI	CCANNNNNNNNNTGG	1 cut(s)	534
XmaI	CCCGGG	1 cut(s)	664
XmiI	GTMKAC	2 cut(s)	825, 858
XspI	CTAG	4 cut(s)	132, 1256, 1299, 1337
Zsp2I	ATGCAT	1 cut(s)	1055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.