Rorug02G0193800

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
18028993 .. 18029304
312 bp
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UTR
Exon/CDS
Intron
Rorug02G0193800.1

Sequence Viewer

Length: 312 bp
ATGGAGTTTCGTGAACTTGAGTTGCTGAGTTTAGACCAAGATGAGATTAGCACTAGTGCTAGTGTTCTTTCTGGAGGATGTCTAGCAGTAACAAGCAGTAAGCGGCCTTATGATGAGTTTGTTCAGTTATGGGTCATGAGAGAGTATGATGTGCCAGAGTCTTGGACCAAGCTCTTTAGGTTTTATATTGGCAATCGGCCTGAGCAGGAATACTTGAGGATGAGAGTCTTCTATTCGGAGAGTTGCATAGTTATGCTGCAAGGGACTTTTTTGGACAAATACTTGAAAAGGTTTGCTTATCAAAAGGGTTGA

Protein Analysis

103

Amino Acids

12.26

Weight (kDa)

5.16

Isoelectric Point (pI)

55.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012202)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 103
AgsI TTSAA 1 cut(s) 286
AhlI ACTAGT 1 cut(s) 53
AluBI AGCT 1 cut(s) 172
AluI AGCT 1 cut(s) 172
AoxI GGCC 2 cut(s) 104, 197
ApeKI GCWGC 1 cut(s) 256
AspS9I GGNCC 1 cut(s) 165
AvaII GGWCC 1 cut(s) 165
BbsI GAAGAC 1 cut(s) 220
BbvI GCAGC 1 cut(s) 243
BcuI ACTAGT 1 cut(s) 53
BfaI CTAG 3 cut(s) 54, 60, 83
BisI GCNGC 2 cut(s) 104, 257
BlsI GCNGC 2 cut(s) 105, 258
Bme18I GGWCC 1 cut(s) 165
BmgT120I GGNCC 1 cut(s) 165
BpiI GAAGAC 1 cut(s) 220
BpmI CTGGAG 1 cut(s) 93
Bpu10I CCTNAGC 1 cut(s) 201
BpuEI CTTGAG 2 cut(s) 38, 235
BseGI GGATG 2 cut(s) 83, 225
BseMII CTCAG 2 cut(s) 17, 192
BseXI GCAGC 1 cut(s) 243
BshFI GGCC 2 cut(s) 106, 199
BslFI GGGAC 1 cut(s) 277
BsmFI GGGAC 1 cut(s) 277
BsnI GGCC 2 cut(s) 106, 199
BspACI CCGC 1 cut(s) 103
BspANI GGCC 2 cut(s) 106, 199
BspCNI CTCAG 2 cut(s) 18, 193
BspHI TCATGA 1 cut(s) 135
BstDEI CTNAG 2 cut(s) 26, 201
BstF5I GGATG 2 cut(s) 83, 225
BstV1I GCAGC 1 cut(s) 243
BstV2I GAAGAC 1 cut(s) 220
BstXI CCANNNNNNTGG 1 cut(s) 162
BsuRI GGCC 2 cut(s) 106, 199
BtsCI GGATG 2 cut(s) 83, 225
CciI TCATGA 1 cut(s) 135
Cfr13I GGNCC 1 cut(s) 165
CviAII CATG 1 cut(s) 136
CviJI RGCY 3 cut(s) 106, 172, 199
CviKI_1 RGCY 3 cut(s) 106, 172, 199
DdeI CTNAG 2 cut(s) 26, 201
Eco47I GGWCC 1 cut(s) 165
FaeI CATG 1 cut(s) 139
FaiI YATR 7 cut(s) 111, 130, 137, 147, 186, 248, 254
FalI AAGNNNNNCTT 2 cut(s) 280, 312
FaqI GGGAC 1 cut(s) 277
FatI CATG 1 cut(s) 135
Fnu4HI GCNGC 2 cut(s) 104, 257
FokI GGATG 2 cut(s) 90, 232
Fsp4HI GCNGC 2 cut(s) 104, 257
FspBI CTAG 3 cut(s) 54, 60, 83
GluI GCNGC 2 cut(s) 104, 257
GsuI CTGGAG 1 cut(s) 93
HaeIII GGCC 2 cut(s) 106, 199
Hin1II CATG 1 cut(s) 139
HinfI GANTC 2 cut(s) 158, 225
Hpy166II GTNNAC 1 cut(s) 14
Hpy188I TCNGA 1 cut(s) 238
Hpy188III TCNNGA 3 cut(s) 11, 72, 136
Hpy8I GTNNAC 1 cut(s) 14
HpyCH4V TGCA 2 cut(s) 246, 259
HpyF3I CTNAG 2 cut(s) 26, 201
Hsp92II CATG 1 cut(s) 139
LpnPI CCDG 4 cut(s) 57, 168, 191, 213
Lsp1109I GCAGC 1 cut(s) 243
MaeI CTAG 3 cut(s) 54, 60, 83
MaeIII GTNAC 1 cut(s) 88
MboII GAAGA 1 cut(s) 220
MlyI GAGTC 2 cut(s) 167, 234
MnlI CCTC 2 cut(s) 68, 210
MslI CAYNNNNRTG 1 cut(s) 251
NlaIII CATG 1 cut(s) 139
PagI TCATGA 1 cut(s) 135
PkrI GCNGC 2 cut(s) 105, 258
PleI GAGTC 2 cut(s) 166, 233
PpsI GAGTC 2 cut(s) 166, 233
PspPI GGNCC 1 cut(s) 165
RseI CAYNNNNRTG 1 cut(s) 251
SatI GCNGC 2 cut(s) 104, 257
Sau96I GGNCC 1 cut(s) 165
SchI GAGTC 2 cut(s) 167, 234
SetI ASST 3 cut(s) 174, 182, 293
SinI GGWCC 1 cut(s) 165
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 2 cut(s) 17, 214
SmoI CTYRAG 2 cut(s) 17, 214
SpeI ACTAGT 1 cut(s) 53
SsiI CCGC 1 cut(s) 103
SspMI CTAG 3 cut(s) 54, 60, 83
TauI GCSGC 1 cut(s) 106
TseI GCWGC 1 cut(s) 256
VpaK11BI GGWCC 1 cut(s) 165
XspI CTAG 3 cut(s) 54, 60, 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.