pycom15g35360

isoform X1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
35288281 .. 35310185
21905 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4002 bp
ATGGCCGGAGCAGCTTCCAATGACCAGGCTCTCTCTCTCCTCGCCACCGTCAACAACCACGGCGATTTGGCCGTCAAGCTTTCGTCTTTGAAGCAGGCCAAGGATCTTTTGCTGTCCCTCGAGCCCTCTGTGGCTGCCGACCTCTTCCCCTACTTGGTCGAGCTCCAGTCCTCCCCTGAAAGCCTCGTCCGCTTGTCTCTCCTCGAGGTCATTGAGGAGGTTGGCATGAAAGCAATGAAGGAATCTTCTGTACTAATGTCTGTCTTATTGGCATTTTTAAGGGACAGTGACTCTATTATTGCAAGGCAATCTATAGTTAGTGGAACAAATTTCTTTGTCACCGTCTTGGAGCAGATGACGTTGCAGTTTCACCGGCGTGGTAAAGTTGAGATATGGCTTGAAGAACTTTGGTCGTGGATGTCCAAGTTTAAGGATGCCGTTTTCGCTATTGCAGTAGAGCCTGGTTCTGTGGGGACAAAGTTGCTTGCTTTGAAATTTTTGGAAACGTATATTTTGCTCTTCACATCTGAAGGCAATGATTCTGGAAAACCTGTCATAGAAGATACAGCATCAAGTAGAAGGGATTTTAACATTTCATGGCTTCTTGGTGGACAACACCCAATTCTTGACCCGTACATGCTAATGTCAGAAGCAAATAGGACTCTTGACATTCTATTAAATTTGTTGAGGTCATCTAGTAGTCTCCCAGGTTCCGTGACAATTGCCGTTGTCAATGGTCTTGCAGCCATAGCGCGGAAGAGGCCAATTCACTATAATACCATTCTTTCTGCACTGTTAGATTTTGATCCAAACTTTGAGATAGTGAAAGGACGCCATGTGGCCAGTATCCAGTATTCTTTAAGAACTGCATTCTTGGGATTCCTTAGGTGTACTAACCCGGCCTTAGTAGAGTCAAGAGATAGACTGCTGAGAGCTCTACGAGCTATGAATGCTGGGGATGCGGCTGATCAAGCAATCCGTCAAGTTGAAAAAATGTTAAGAAATGCTGAGCGTGCTTCACGTGATGCTCGGTTGGCCAAGGATGATCAACAACCAAGAGAGTTGCCTGTCCCAGGGGATGCGTTAAAGAAGAGACCTACACCTCTGGATGTTGAAGAGTCATCGAATAATCATGAATTGCCGTCCAAGAGAATTCGTTATGGTCCCGACTCCTATTCGACTTTGCCATTTCAAATGAATTCTTCTGGGTGGGATGCCACTTCTGTCAACGGAGTATCCTCTGACCTTCCTATGTTAGATGGTGAATCGACTCCTGTGGAGCAAATGATTGCTGTGATTGGTGCTTTGATTGCTGAAGGAGAAAGAGGTGCTCAATCCCTTGAAATTCTTATTTCAAATATCCATCCTGATCTATTGGCTGACATTGTCATAACTAACATGAGGCATTTGCCTAAGATGCCCCCACCCTTGACAAGGCTTGGGAACTTGCCGGTTCCCCAGCAGATAGGATCCCCAACATCTTCTGTGCAGTCTCCAGTTCCCACTGTACAAATGCCTTTTTCTGCTGCAACTGTAACCAGTTTATCAGTTTCTGATATGTCCAATGTGAATAGTCTTCCCACTGATTCCAAGAGAGATCCACGGAGGGATCCCCGTCGCCTGGATCCACGGTATGTAGCAGTGTCTTCTGGACTGGCATCCACACCCACTGCGGAAGATAATACTACTATGCATTCTGACTTTGATGGCTCAAATTCTTTAAATAAGCTTGATCCGCTGCCTAACGTGACGACTGTCGAGACTCCTTTAGCGACTCCCATGATCAAAACGGAAATCGATGAAAGGATTTTGGATAGTCAATTGGTTTCTGGAACTGGCCCACTAACTCCGAAGGGGGAGGTTCTGGATAGACCTGTTGAAATTGATGCTGATCCGGAGGTCAAATTATCTTCAGATCTCACAGATTCTCCTGTGCAAACAGTTGATGAGGACCTTGTTGCAGTGAAGCTGTCAGATATTGAAGTGAAAGATCAGGTTGAGGACCTTGATACCTCATCTTTTCTAGAATCTGATCAACATTCTCCGGTTCTTTCAAACACATCTGCATCGGAAGATACTTATGAGGATTTGCCTCAGGTTCCCATATATGTTGAGCTTACCCAAGAACAGGAAAGAAATGTGAGAAAATTAGCAATTGAGCGAATTATTGAGTCATACAAGTATTTGCATGGCACAGATTACAGTCAGATGCGCCTGGCCTTACTTGCTCGGTTGGTTGCTCAGATTGATGCAGATGATGAAATTGTTGTAATGCTGCATAAGCATATCATTGTGGATTACCAACAGAAAAAGGGCCATGAGCTAGTACTGCATGTCTTGTACCATTTGCATGCTTTGACAAAGTCTGATTCAGTTGAAAACTGTACATTCGCTACTGCCGTATATGAAAAGTTCCTCTTGGAAGTGGCTAAGTCTTTGCTGGAATCCTTTCCTGCCTCAGACAAGTCGTTTAGTAGACTTCTTGGTGAAGTTCCAATTTTGCCTGACTCCACTTTGAAACTACTTGATGATCTATGCTATTCTGATGTTATTGATCAACAAGGGAAAGATGTTCGTGACATTGAGCGCGTCACTCAGGGCCTTGGGGCTGTTTGGAGTTTAATCTTGGGGAGGCCACATTATCGACAAAGCTTTTTAGATATCACTTTGAAGTGTGCTGTTCATCCACAAGATGAGATCCGAGCCAAATCTATCCGGCTGGTGGCAAACAAACTCTATAAGTTGAGTTACTTATCAGAAATGATTGAGAAATTTGCGACAAATATGTTGATGTCAGCTGTTGAACAATCTCCTTCGGGTATAGAGCATTCACAATCCGAGTCCACAGGACAAAGAGTTGAAGGAATGGTTGGAAGCCAAGAAACATTGATTGGTGATTTTGAAACTTTGGAGTCTGGAAATACTGAAAATGATTCCACCAGAAAGGATCAACCTGTACCAGCCATGTCATTTCCTGAAGTTCAACGACTCATATCTTTGTTTTTTGCTTTATGTACAAAGAAACCTAGTCTTATTGAACTTGTATTTAATACTTATGGACATGCCCCAAAAGCTGTAAAGCAGGCATTTCATCGCCATATTCCAGTCCTTATAAGGGCCCTAGGGTCATCTTATTCTGAATTGCTAAAAATTATCTCTGATCCACCTCAAGGAAGTGAAAATCTTTTGATGCTGGTGCTGCAAATATTGACTCAAGAGACATCGCCTTCAGCTGATCTGATAGCCACTGTTAAACATTTGTATGAAACTAAATTAAAGGATGTCACAATTCTTATTCCAATGCTGTCTGCACTTTCTAAAAATGAGGTTTTACCTATATTCCCTCGGCTTGTTGCTCTTCCATTGGAAAAGTTCCAGACAGCACTTGCTCACATACTGCAGGGCTCAGCTCATACAGGCCCAGCTTTAACACCTGCAGAAGTGTTGGTTTCCATCCATGGTATTGTCCCTGAGAAAGATGGACTCCCACTTAAGAAGATAACAGATGCTTGCTCAGCCTGTTTTGAGCAACGCACAGTTTTTACACAGCAGGTCTTGGCAAAGGCCCTGAATCAGATGGTTGACCAGACTCCTCTTCCTCTTCTCTTTATGAGAACAGTTATTCAGGCAATAGATGCTTTTCCTTCACTGGTTGATTTTGTAATGGAAATACTTTCCAAACTTGTAAGTAAACAGGTGTGGAGAATGCCAAAACTGTGGTTTGGATTCTTGAAATGTGCATCACAGACACAGCCGCATTCTTTCCCTGTATTGTTACAGTTACCACCCCCACAACTTGAAAGCGCTCTGAACAAATATGCGAACCTCAGAGGTCCCCTTGCCACTTATGCTAGCCAGCCTAGTGTAAAAGCTTCACTCCCTAGACCAACACTTGCCGTCCTTGGTCTAGCAAATGAAACGCATTCACAGCAACCACATTTGCCATCATCCTTTCACCCTGCAGACACAAGCTCATCAGTACATGGAGCAACTCCAACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1334

Amino Acids

146.81

Weight (kDa)

5.4

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SYMPK_PTA1_N PF11935 98 - 322 1.6e-39 Symplekin/PTA1 N-terminal
Symplekin_C PF12295 1094 - 1272 8.1e-66 Symplekin tight junction protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3113
AarI CACCTGC 1 cut(s) 3442
AbsI CCTCGAGG 1 cut(s) 203
Acc36I ACCTGC 2 cut(s) 3442, 3541
AccI GTMKAC 1 cut(s) 2476
AccII CGCG 2 cut(s) 754, 2589
AccIII TCCGGA 1 cut(s) 1894
AciI CCGC 6 cut(s) 190, 754, 962, 1673, 1736, 3755
AcoI YGGCCR 4 cut(s) 3, 69, 840, 1035
AcsI RAATTY 8 cut(s) 328, 494, 679, 1152, 1198, 1344, 1714, 2771
AcuI CTGAAG 5 cut(s) 549, 1335, 1896, 2997, 3213
AcvI CACGTG 1 cut(s) 1022
AcyI GRCGYC 1 cut(s) 832
AfeI AGCGCT 1 cut(s) 3805
AfiI CCNNNNNNNGG 9 cut(s) 154, 753, 1073, 1434, 1621, 2128, 2722, 3115, 3170
AflII CTTAAG 1 cut(s) 3491
AjnI CCWGG 6 cut(s) 24, 460, 706, 1072, 1620, 2214
AjuI GAANNNNNNNTTGG 4 cut(s) 2853, 2874, 2885, 2906
AleI CACNNNNGTG 1 cut(s) 375
Alw21I GWGCWC 3 cut(s) 165, 937, 1333
Alw26I GTCTC 6 cut(s) 201, 707, 1087, 1497, 1754, 3212
AlwNI CAGNNNCTG 1 cut(s) 1553
Ama87I CYCGRG 2 cut(s) 119, 203
Aor13HI TCCGGA 1 cut(s) 1894
Aor51HI AGCGCT 1 cut(s) 3805
ApaI GGGCCC 1 cut(s) 3121
ApeKI GCWGC 7 cut(s) 11, 134, 743, 1526, 1738, 2275, 3199
ApoI RAATTY 8 cut(s) 328, 494, 679, 1152, 1198, 1344, 1714, 2771
Asp700I GAANNNNTTC 1 cut(s) 2448
AspA2I CCTAGG 1 cut(s) 3121
AspLEI GCGC 4 cut(s) 754, 2214, 2589, 3806
AsuC2I CCSGG 1 cut(s) 899
AsuHPI GGTGA 6 cut(s) 331, 362, 1274, 2498, 2906, 3947
AsuNHI GCTAGC 1 cut(s) 3851
AvaI CYCGRG 2 cut(s) 119, 203
AvaII GGWCC 4 cut(s) 1163, 1951, 2002, 3833
AvrII CCTAGG 1 cut(s) 3121
AxyI CCTNAGG 2 cut(s) 884, 2094
BaeGI GKGCMC 1 cut(s) 3121
BalI TGGCCA 2 cut(s) 842, 1037
BamHI GGATCC 3 cut(s) 1469, 1609, 1624
BanII GRGCYC 5 cut(s) 126, 165, 937, 3121, 3407
BbrPI CACGTG 1 cut(s) 1022
BbsI GAAGAC 2 cut(s) 1568, 1638
Bbv12I GWGCWC 3 cut(s) 165, 937, 1333
BbvI GCAGC 7 cut(s) 23, 121, 755, 1513, 1725, 2262, 3186
BccI CCATC 7 cut(s) 1253, 1371, 1700, 3461, 3473, 3571, 3952
BceAI ACGGC 7 cut(s) 56, 76, 422, 710, 1126, 2384, 3881
BciT130I CCWGG 6 cut(s) 26, 462, 708, 1074, 1622, 2216
BciVI GTATCC 2 cut(s) 857, 1246
BclI TGATCA 5 cut(s) 967, 1045, 1782, 2032, 2554
BcnI CCSGG 1 cut(s) 899
BcoDI GTCTC 6 cut(s) 201, 707, 1087, 1497, 1754, 3212
BfaI CTAG 9 cut(s) 696, 2024, 2324, 3027, 3122, 3852, 3861, 3882, 3908
BfmI CTRYAG 4 cut(s) 312, 3398, 3435, 3960
BfoI RGCGCY 1 cut(s) 3807
BfrI CTTAAG 1 cut(s) 3491
BfuAI ACCTGC 2 cut(s) 3442, 3541
BfuI GTATCC 2 cut(s) 857, 1246
BglII AGATCT 1 cut(s) 1915
BisI GCNGC 9 cut(s) 12, 135, 744, 963, 1527, 1739, 2276, 3200, 3755
BlnI CCTAGG 1 cut(s) 3121
BlpI GCTNAGC 3 cut(s) 1008, 3406, 3514
BlsI GCNGC 9 cut(s) 13, 136, 745, 964, 1528, 1740, 2277, 3201, 3756
BmcAI AGTACT 1 cut(s) 2328
Bme1390I CCNGG 7 cut(s) 26, 462, 708, 899, 1074, 1622, 2216
Bme18I GGWCC 4 cut(s) 1163, 1951, 2002, 3833
BmeT110I CYCGRG 2 cut(s) 119, 203
BmiI GGNNCC 9 cut(s) 712, 1165, 1455, 1471, 1611, 1626, 2100, 3119, 3835
BmrFI CCNGG 7 cut(s) 26, 462, 708, 899, 1074, 1622, 2216
BmtI GCTAGC 1 cut(s) 3855
BoxI GACNNNNGTC 1 cut(s) 1754
BpiI GAAGAC 2 cut(s) 1568, 1638
BpmI CTGGAG 2 cut(s) 149, 1479
Bpu1102I GCTNAGC 3 cut(s) 1008, 3406, 3514
BpuEI CTTGAG 2 cut(s) 3153, 3198
BpuMI CCSGG 1 cut(s) 899
Bsa29I ATCGAT 1 cut(s) 1797
BsaAI YACGTR 1 cut(s) 1022
BsaBI GATNNNNATC 2 cut(s) 804, 1890
BsaHI GRCGYC 1 cut(s) 832
BsaI GGTCTC 1 cut(s) 1087
BsaWI WCCGGW 2 cut(s) 1894, 2044
BsaXI ACNNNNNCTCC 2 cut(s) 1912, 1942
Bsc4I CCNNNNNNNGG 9 cut(s) 154, 753, 1073, 1434, 1621, 2128, 2722, 3115, 3170
Bse118I RCCGGY 2 cut(s) 372, 1450
Bse1I ACTGG 9 cut(s) 166, 843, 850, 1496, 1539, 1659, 1840, 3104, 3654
Bse21I CCTNAGG 2 cut(s) 884, 2094
Bse3DI GCAATG 2 cut(s) 240, 541
Bse8I GATNNNNATC 2 cut(s) 804, 1890
BseAI TCCGGA 1 cut(s) 1894
BseBI CCWGG 6 cut(s) 26, 462, 708, 1074, 1622, 2216
BseCI ATCGAT 1 cut(s) 1797
BseJI GATNNNNATC 2 cut(s) 804, 1890
BseLI CCNNNNNNNGG 9 cut(s) 154, 753, 1073, 1434, 1621, 2128, 2722, 3115, 3170
BseMI GCAATG 2 cut(s) 240, 541
BseNI ACTGG 9 cut(s) 166, 843, 850, 1496, 1539, 1659, 1840, 3104, 3654
BseRI GAGGAG 4 cut(s) 29, 191, 230, 3582
BseSI GKGCMC 1 cut(s) 3121
BseXI GCAGC 7 cut(s) 23, 121, 755, 1513, 1725, 2262, 3186
BseYI CCCAGC 3 cut(s) 953, 1458, 3421
BsgI GTGCAG 3 cut(s) 774, 1508, 3294
Bsh1236I CGCG 2 cut(s) 754, 2589
BshVI ATCGAT 1 cut(s) 1797
BsiHKAI GWGCWC 3 cut(s) 165, 937, 1333
BsiHKCI CYCGRG 2 cut(s) 119, 203
BsiSI CCGG 7 cut(s) 6, 373, 899, 1451, 1895, 2045, 2716
BslFI GGGAC 7 cut(s) 100, 296, 487, 1055, 1149, 3452, 3819
BslI CCNNNNNNNGG 9 cut(s) 154, 753, 1073, 1434, 1621, 2128, 2722, 3115, 3170
BsmAI GTCTC 6 cut(s) 201, 707, 1087, 1497, 1754, 3212
BsmFI GGGAC 7 cut(s) 100, 296, 487, 1055, 1149, 3452, 3819
BsmI GAATGC 7 cut(s) 869, 955, 1693, 2827, 3711, 3757, 3922
Bso31I GGTCTC 1 cut(s) 1087
BsoBI CYCGRG 2 cut(s) 119, 203
Bsp120I GGGCCC 1 cut(s) 3117
Bsp1286I GDGCHC 6 cut(s) 126, 165, 937, 1333, 3121, 3407
Bsp13I TCCGGA 1 cut(s) 1894
Bsp1407I TGTACA 3 cut(s) 1507, 2384, 3014
Bsp1720I GCTNAGC 3 cut(s) 1008, 3406, 3514
Bsp19I CCATGG 1 cut(s) 3457
BspACI CCGC 6 cut(s) 190, 754, 962, 1673, 1736, 3755
BspDI ATCGAT 1 cut(s) 1797
BspEI TCCGGA 1 cut(s) 1894
BspFNI CGCG 2 cut(s) 754, 2589
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 9 cut(s) 712, 1165, 1455, 1471, 1611, 1626, 2100, 3119, 3835
BspMAI CTGCAG 3 cut(s) 3402, 3439, 3964
BspMI ACCTGC 2 cut(s) 3442, 3541
BspOI GCTAGC 1 cut(s) 3855
BspQI GCTCTTC 2 cut(s) 524, 3363
BspTI CTTAAG 1 cut(s) 3491
BspTNI GGTCTC 1 cut(s) 1087
BsrDI GCAATG 2 cut(s) 240, 541
BsrFI RCCGGY 2 cut(s) 372, 1450
BsrGI TGTACA 3 cut(s) 1507, 2384, 3014
BsrI ACTGG 9 cut(s) 166, 843, 850, 1496, 1539, 1659, 1840, 3104, 3654
BssAI RCCGGY 2 cut(s) 372, 1450
BssNI GRCGYC 1 cut(s) 832
BssT1I CCWWGG 6 cut(s) 99, 1038, 2602, 3121, 3457, 3901
Bst2UI CCWGG 6 cut(s) 26, 462, 708, 1074, 1622, 2216
Bst6I CTCTTC 8 cut(s) 149, 524, 752, 1085, 1110, 3363, 3600, 3606
BstACI GRCGYC 1 cut(s) 832
BstAFI CTTAAG 1 cut(s) 3491
BstAPI GCANNNNNTGC 1 cut(s) 3635
BstAUI TGTACA 3 cut(s) 1507, 2384, 3014
BstBAI YACGTR 1 cut(s) 1022
BstC8I GCNNGC 8 cut(s) 96, 486, 1014, 2352, 3084, 3511, 3853, 3857
BstDSI CCRYGG 4 cut(s) 58, 1601, 1628, 3457
BstENI CCTNNNNNAGG 2 cut(s) 1071, 1432
BstFNI CGCG 2 cut(s) 754, 2589
BstH2I RGCGCY 1 cut(s) 3807
BstHHI GCGC 4 cut(s) 754, 2214, 2589, 3806
BstMAI GTCTC 6 cut(s) 201, 707, 1087, 1497, 1754, 3212
BstNI CCWGG 6 cut(s) 26, 462, 708, 1074, 1622, 2216
BstNSI RCATGY 4 cut(s) 640, 2336, 2354, 3065
BstPAI GACNNNNGTC 1 cut(s) 1754
BstSCI CCNGG 7 cut(s) 24, 460, 706, 897, 1072, 1620, 2214
BstSFI CTRYAG 4 cut(s) 312, 3398, 3435, 3960
BstSLI GKGCMC 1 cut(s) 3121
BstUI CGCG 2 cut(s) 754, 2589
BstV1I GCAGC 7 cut(s) 23, 121, 755, 1513, 1725, 2262, 3186
BstV2I GAAGAC 2 cut(s) 1568, 1638
BstX2I RGATCY 7 cut(s) 103, 1469, 1597, 1609, 1624, 1915, 2697
BstXI CCANNNNNNTGG 1 cut(s) 3717
BstYI RGATCY 7 cut(s) 103, 1469, 1597, 1609, 1624, 1915, 2697
Bsu15I ATCGAT 1 cut(s) 1797
Bsu36I CCTNAGG 2 cut(s) 884, 2094
BsuI GTATCC 2 cut(s) 857, 1246
BsuTUI ATCGAT 1 cut(s) 1797
BtgI CCRYGG 4 cut(s) 58, 1601, 1628, 3457
BtgZI GCGATG 2 cut(s) 3077, 3207
BtsI GCAGTG 3 cut(s) 1647, 1668, 1968
BtsIMutI CAGTG 9 cut(s) 292, 791, 1503, 1581, 1647, 1668, 1968, 3246, 3647
BveI ACCTGC 2 cut(s) 3442, 3541
Cac8I GCNNGC 8 cut(s) 96, 486, 1014, 2352, 3084, 3511, 3853, 3857
CaiI CAGNNNCTG 1 cut(s) 1553
CciI TCATGA 1 cut(s) 1132
CfoI GCGC 4 cut(s) 754, 2214, 2589, 3806
Cfr10I RCCGGY 2 cut(s) 372, 1450
ClaI ATCGAT 1 cut(s) 1797
CseI GACGC 2 cut(s) 840, 2578
DraI TTTAAA 1 cut(s) 1722
EaeI YGGCCR 4 cut(s) 3, 69, 840, 1035
Eam1104I CTCTTC 8 cut(s) 149, 524, 752, 1085, 1110, 3363, 3600, 3606
EarI CTCTTC 8 cut(s) 149, 524, 752, 1085, 1110, 3363, 3600, 3606
Ecl136II GAGCTC 2 cut(s) 163, 935
Eco130I CCWWGG 6 cut(s) 99, 1038, 2602, 3121, 3457, 3901
Eco24I GRGCYC 5 cut(s) 126, 165, 937, 3121, 3407
Eco31I GGTCTC 1 cut(s) 1087
Eco32I GATATC 1 cut(s) 2662
Eco47I GGWCC 4 cut(s) 1163, 1951, 2002, 3833
Eco47III AGCGCT 1 cut(s) 3805
Eco53kI GAGCTC 2 cut(s) 163, 935
Eco57I CTGAAG 5 cut(s) 549, 1335, 1896, 2997, 3213
Eco72I CACGTG 1 cut(s) 1022
Eco81I CCTNAGG 2 cut(s) 884, 2094
Eco88I CYCGRG 2 cut(s) 119, 203
EcoICRI GAGCTC 2 cut(s) 163, 935
EcoNI CCTNNNNNAGG 2 cut(s) 1071, 1432
EcoO109I RGGNCCY 7 cut(s) 1951, 2002, 2599, 3117, 3118, 3565, 3833
EcoRI GAATTC 2 cut(s) 1152, 1198
EcoRII CCWGG 6 cut(s) 24, 460, 706, 1072, 1620, 2214
EcoRV GATATC 1 cut(s) 2662
EcoT14I CCWWGG 6 cut(s) 99, 1038, 2602, 3121, 3457, 3901
EcoT22I ATGCAT 1 cut(s) 1695
EcoT38I GRGCYC 5 cut(s) 126, 165, 937, 3121, 3407
ErhI CCWWGG 6 cut(s) 99, 1038, 2602, 3121, 3457, 3901
FalI AAGNNNNNCTT 2 cut(s) 2402, 2434
FaqI GGGAC 7 cut(s) 100, 296, 487, 1055, 1149, 3452, 3819
FbaI TGATCA 5 cut(s) 967, 1045, 1782, 2032, 2554
FblI GTMKAC 1 cut(s) 2476
Fnu4HI GCNGC 9 cut(s) 12, 135, 744, 963, 1527, 1739, 2276, 3200, 3755
FriOI GRGCYC 5 cut(s) 126, 165, 937, 3121, 3407
Fsp4HI GCNGC 9 cut(s) 12, 135, 744, 963, 1527, 1739, 2276, 3200, 3755
FspBI CTAG 9 cut(s) 696, 2024, 2324, 3027, 3122, 3852, 3861, 3882, 3908
GlaI GCGC 4 cut(s) 753, 2213, 2588, 3805
GluI GCNGC 9 cut(s) 12, 135, 744, 963, 1527, 1739, 2276, 3200, 3755
GsaI CCCAGC 3 cut(s) 957, 1462, 3425
GsuI CTGGAG 2 cut(s) 149, 1479
HaeII RGCGCY 1 cut(s) 3807
HapII CCGG 7 cut(s) 6, 373, 899, 1451, 1895, 2045, 2716
HgaI GACGC 2 cut(s) 840, 2578
HhaI GCGC 4 cut(s) 754, 2214, 2589, 3806
Hin1I GRCGYC 1 cut(s) 832
Hin6I GCGC 4 cut(s) 752, 2212, 2587, 3804
HinP1I GCGC 4 cut(s) 752, 2212, 2587, 3804
HincII GTYRAC 3 cut(s) 52, 1228, 3583
HindII GTYRAC 3 cut(s) 52, 1228, 3583
HindIII AAGCTT 4 cut(s) 77, 1727, 2650, 3870
HpaII CCGG 7 cut(s) 6, 373, 899, 1451, 1895, 2045, 2716
HphI GGTGA 6 cut(s) 331, 362, 1274, 2498, 2906, 3947
Hpy166II GTNNAC 8 cut(s) 52, 611, 891, 1228, 2477, 2844, 3583, 3692
Hpy8I GTNNAC 8 cut(s) 52, 611, 891, 1228, 2477, 2844, 3583, 3692
Hpy99I CGWCG 1 cut(s) 1620
HpyCH4IV ACGT 5 cut(s) 359, 506, 1021, 1746, 3998
HpySE526I ACGT 5 cut(s) 359, 506, 1021, 1746, 3998
Hsp92I GRCGYC 1 cut(s) 832
HspAI GCGC 4 cut(s) 752, 2212, 2587, 3804
Kpn2I TCCGGA 1 cut(s) 1894
Ksp22I TGATCA 5 cut(s) 967, 1045, 1782, 2032, 2554
LguI GCTCTTC 2 cut(s) 524, 3363
LmnI GCTCC 5 cut(s) 8, 168, 349, 1279, 3986
Lsp1109I GCAGC 7 cut(s) 23, 121, 755, 1513, 1725, 2262, 3186
MaeI CTAG 9 cut(s) 696, 2024, 2324, 3027, 3122, 3852, 3861, 3882, 3908
MaeII ACGT 5 cut(s) 359, 506, 1021, 1746, 3998
MfeI CAATTG 3 cut(s) 720, 1820, 2154
MflI RGATCY 7 cut(s) 103, 1469, 1597, 1609, 1624, 1915, 2697
MhlI GDGCHC 6 cut(s) 126, 165, 937, 1333, 3121, 3407
MlsI TGGCCA 2 cut(s) 842, 1037
MluNI TGGCCA 2 cut(s) 842, 1037
MmeI TCCRAC 1 cut(s) 2851
Mox20I TGGCCA 2 cut(s) 842, 1037
Mph1103I ATGCAT 1 cut(s) 1695
MroI TCCGGA 1 cut(s) 1894
MroXI GAANNNNTTC 1 cut(s) 2448
MscI TGGCCA 2 cut(s) 842, 1037
MslI CAYNNNNRTG 4 cut(s) 375, 641, 2349, 3261
Msp20I TGGCCA 2 cut(s) 842, 1037
MspA1I CMGCKG 3 cut(s) 1738, 2798, 3233
MspCI CTTAAG 1 cut(s) 3491
MspI CCGG 7 cut(s) 6, 373, 899, 1451, 1895, 2045, 2716
MspR9I CCNGG 7 cut(s) 26, 462, 708, 899, 1074, 1622, 2216
MunI CAATTG 3 cut(s) 720, 1820, 2154
Mva1269I GAATGC 7 cut(s) 869, 955, 1693, 2827, 3711, 3757, 3922
MvaI CCWGG 6 cut(s) 26, 462, 708, 1074, 1622, 2216
MvnI CGCG 2 cut(s) 754, 2589
NciI CCSGG 1 cut(s) 899
NcoI CCATGG 1 cut(s) 3457
NheI GCTAGC 1 cut(s) 3851
NlaIV GGNNCC 9 cut(s) 712, 1165, 1455, 1471, 1611, 1626, 2100, 3119, 3835
NmeAIII GCCGAG 1 cut(s) 3325
NmuCI GTSAC 7 cut(s) 287, 337, 715, 1747, 2576, 2590, 3283
NsiI ATGCAT 1 cut(s) 1695
NspI RCATGY 4 cut(s) 640, 2336, 2354, 3065
OliI CACNNNNGTG 1 cut(s) 375
PaeI GCATGC 1 cut(s) 2354
PaeR7I CTCGAG 2 cut(s) 119, 203
PagI TCATGA 1 cut(s) 1132
PaqCI CACCTGC 1 cut(s) 3442
PasI CCCWGGG 1 cut(s) 1073
PciSI GCTCTTC 2 cut(s) 524, 3363
PcsI WCGNNNNNNNCGW 1 cut(s) 2397
PctI GAATGC 7 cut(s) 869, 955, 1693, 2827, 3711, 3757, 3922
PdmI GAANNNNTTC 1 cut(s) 2448
PflFI GACNNNGTC 2 cut(s) 1385, 2362
PkrI GCNGC 9 cut(s) 13, 136, 745, 964, 1528, 1740, 2277, 3201, 3756
PmaCI CACGTG 1 cut(s) 1022
PmlI CACGTG 1 cut(s) 1022
Ppu21I YACGTR 1 cut(s) 1022
PpuMI RGGWCCY 3 cut(s) 1951, 2002, 3833
PshAI GACNNNNGTC 1 cut(s) 1754
PsiI TTATAA 1 cut(s) 3113
Psp124BI GAGCTC 2 cut(s) 165, 937
Psp5II RGGWCCY 3 cut(s) 1951, 2002, 3833
Psp6I CCWGG 6 cut(s) 24, 460, 706, 1072, 1620, 2214
PspCI CACGTG 1 cut(s) 1022
PspFI CCCAGC 3 cut(s) 953, 1458, 3421
PspGI CCWGG 6 cut(s) 24, 460, 706, 1072, 1620, 2214
PspN4I GGNNCC 9 cut(s) 712, 1165, 1455, 1471, 1611, 1626, 2100, 3119, 3835
PspOMI GGGCCC 1 cut(s) 3117
PspPPI RGGWCCY 3 cut(s) 1951, 2002, 3833
PspXI VCTCGAGB 2 cut(s) 119, 203
PstI CTGCAG 3 cut(s) 3402, 3439, 3964
PstNI CAGNNNCTG 1 cut(s) 1553
PsuI RGATCY 7 cut(s) 103, 1469, 1597, 1609, 1624, 1915, 2697
PsyI GACNNNGTC 2 cut(s) 1385, 2362
PvuII CAGCTG 2 cut(s) 2798, 3233
RseI CAYNNNNRTG 4 cut(s) 375, 641, 2349, 3261
SacI GAGCTC 2 cut(s) 165, 937
SapI GCTCTTC 2 cut(s) 524, 3363
SatI GCNGC 9 cut(s) 12, 135, 744, 963, 1527, 1739, 2276, 3200, 3755
ScaI AGTACT 1 cut(s) 2328
ScrFI CCNGG 7 cut(s) 26, 462, 708, 899, 1074, 1622, 2216
SduI GDGCHC 6 cut(s) 126, 165, 937, 1333, 3121, 3407
SfcI CTRYAG 4 cut(s) 312, 3398, 3435, 3960
Sfr274I CTCGAG 2 cut(s) 119, 203
SgrAI CRCCGGYG 1 cut(s) 372
SinI GGWCC 4 cut(s) 1163, 1951, 2002, 3833
SlaI CTCGAG 2 cut(s) 119, 203
SmiMI CAYNNNNRTG 4 cut(s) 375, 641, 2349, 3261
SmlI CTYRAG 5 cut(s) 119, 203, 3168, 3213, 3491
SmoI CTYRAG 5 cut(s) 119, 203, 3168, 3213, 3491
SphI GCATGC 1 cut(s) 2354
SsiI CCGC 6 cut(s) 190, 754, 962, 1673, 1736, 3755
SspI AATATT 1 cut(s) 3207
SspMI CTAG 9 cut(s) 696, 2024, 2324, 3027, 3122, 3852, 3861, 3882, 3908
SstI GAGCTC 2 cut(s) 165, 937
StyD4I CCNGG 7 cut(s) 24, 460, 706, 897, 1072, 1620, 2214
StyI CCWWGG 6 cut(s) 99, 1038, 2602, 3121, 3457, 3901
TaiI ACGT 5 cut(s) 362, 509, 1024, 1749, 4001
TaqI TCGA 9 cut(s) 120, 159, 204, 1124, 1178, 1268, 1758, 1797, 2644
TatI WGTACW 7 cut(s) 250, 890, 1507, 2326, 2384, 3014, 3979
TauI GCSGC 2 cut(s) 965, 3757
TscAI CASTG 9 cut(s) 292, 798, 1510, 1588, 1647, 1675, 1968, 3253, 3654
TseFI GTSAC 7 cut(s) 287, 337, 715, 1747, 2576, 2590, 3283
TseI GCWGC 7 cut(s) 11, 134, 743, 1526, 1738, 2275, 3199
Tsp45I GTSAC 7 cut(s) 287, 337, 715, 1747, 2576, 2590, 3283
TspGWI ACGGA 5 cut(s) 703, 968, 1245, 1618, 1805
TspRI CASTG 9 cut(s) 292, 798, 1510, 1588, 1647, 1675, 1968, 3253, 3654
Tth111I GACNNNGTC 2 cut(s) 1385, 2362
Vha464I CTTAAG 1 cut(s) 3491
VpaK11BI GGWCC 4 cut(s) 1163, 1951, 2002, 3833
XagI CCTNNNNNAGG 2 cut(s) 1071, 1432
XapI RAATTY 8 cut(s) 328, 494, 679, 1152, 1198, 1344, 1714, 2771
XbaI TCTAGA 1 cut(s) 2023
XceI RCATGY 4 cut(s) 640, 2336, 2354, 3065
XhoI CTCGAG 2 cut(s) 119, 203
XmaJI CCTAGG 1 cut(s) 3121
XmiI GTMKAC 1 cut(s) 2476
XmnI GAANNNNTTC 1 cut(s) 2448
XspI CTAG 9 cut(s) 696, 2024, 2324, 3027, 3122, 3852, 3861, 3882, 3908
ZrmI AGTACT 1 cut(s) 2328
Zsp2I ATGCAT 1 cut(s) 1695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.