Rh7CG449500

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0006768
Physical Location & Seq
Reverse (-)
59155533 .. 59173628
18096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG449500.1

Sequence Viewer

Length: 3507 bp
ATGGCCGGAGGAGGAGCCCTTAACACCCAAGCACTCTCTCTCCTCGCCGCGGTCAACAACCACGGCGATTTGGCCGTCAAGCTCTCGTCTCTAAAGCAGGCCAAGGATTTGCTCTTGTCCATCGACCCCTCTTCTGCCGCCGAGCTCTTCCCCTACTTGGTCGAGCTCCAGTCTTCCCCTGAAACCCGCGTCCGCTTATCGCTTATCGAGGTAATCGAGGAGATTGGCTTGAGGGCAATGGAGGAGTCATCTGTACTGATGTCTGTCCTATTGGCATTTTTGAGAGATAGTGATTCTATTGTTGCGAGGCAATCTATAGTTAGTGGCACAAATGTCTTTGTTAGTGTTTTGGAGGAGATGACATTGCAGTTTCACCGGAGGGGTAAAATCGAGATATGGCTTGAAGAACTTTGGTCGTGGATGGCTAAGTTCAAGGATGCCATATTCACCATTGCAGTACAGCCTGGTTCTGCTGGAACAAAGTTGCTTGCGTTGAAATTTTTGGAAACATATGTTTTGCTATTCACATCAGACACCAGTGATTCTGAAAAACCTACCGCAGAAGGATGTAGAAGGGGTTTTAATATTTCGTGGCTGGTTGGTGGACACCCTATTCTTGACTCATACATGCTCATGTCAGAAGCAAATAAAGCTCTTGGAATTCTATTAAATTTGTTGCAGTCAGCTGGTAGTCTTCAGGGTTCCTTGACAATTGCCATTGTCAATTGTCTTGCAGCCATAGCAAGAAAGAGGCCAGTTCACTATGGCACCATTGTTTCTGCACTATTTGATTTTGATCCAAACTTCGAATTAGTAAAAGGACGCCATGCTGCCAGTATCCAGTATTCTTTAAGAACTGCCTTTTTGGGATTCCTTCGGTGTACTAGCCCAGTGATTGTAGAGTCAAGAGATAGATTGATTAGGGCCCTACGCTCTATGAATGCTGGGGATGCTGCTGATCAAGTAATCCGCCAAGTTGATAAAATGCTAAAAAACAATGAGAGGGCTTCGCGTGATTCTCGGTCGGGAAAGGATGATCAACTATCAAGCCAACTGCCTGTTTCAGGGGACCTGGTAAGAAAAAGACCTTCACCTCTTGATGTTGAAGAGTCAGCAAATGGTCATGAGATACCTTCCAAGCGAAGTCGTTATGTTCATGAAGCCTATTCAGCATTGCCAGTTCAAAAGAATGATTCTGGGTGGGATACCACTTCTGTCAACGGAGTGTCCTCTGACCTTCCTATGCTAGATGGTGAGGTGACTCCCGTGGAGCAAATGATTACTGTAATTGGCGCATTGCTTGCTGAAGGAGAAAGAGGTGCTGAATCACTTGAAATTCTTGTTTCGACAATCCATCCTGATCTGTTGGCCGATATTGTAATAACTAATATGAGGCACTTGCCGAAGATGCCGCCACCCTTGGCAAGGCCAGGGTTGCCAGTTGCTCGGCAGATAGGTTCTTTAAGTAGTTCGGCACAAGTTGTTTCAGGGTCTCCAACATCATCTGTGCAGTCTCCAGTTTTGGCTGCCCAAATGTCTTTTTCTTCAGCAACTGTAAACAGTTCATCAGGTGCTGATACTTCCAATGTGAATAATCTTCCTGATTCCAAGCGAGATCCACGAAGGGATCCCCGTCGCCTGGATCCACGGTGTATAGCAGTTTCTGCTGAACTGGCATCCTCACCCACAGTAGAGGATACTGATGCTATGCAATCTGACATTGATGGTTCAATTTCCTTGAGTAAGCTTAATTCGCTTCCTGTTGTGACCACTGTTGAATCTACTTTAGTAACTCCCAAGCCCAAAACAGAAAGTGATGATACGATTTTGGATAGTCAATTGGTTTCTGGAACTGGCCAACCAACTCCCAAGGAGGAGGTTCTGGATGGACCTGTGGAAGATGACCCAAATTTGAAGGTCAATGTATCTTCAGATCTAACAGATTCTCGTGTGCAAATTGAAGGGGACCTTGACACAATGCCATTGTCAGATGTTGAAGTAAAAGATGAAGATTATACCACATCTTTTCTAGAATCTGATCAGCATTCTCCTGCTCTTTCAAACACATCTGCATCTGAAGATATATGTCAGGATCTGCCTGAGGTTCCCATATATATTGAGTTGACCCAAGAGCAGGAGCAAAGACTAGGGCATTTGGCTGTTGAGCGAATTATTCAATCATACAAGCATTTGCATGGAACAGATTATAGTCAGATGCGCTTGGCATTACTTGCTCGATTGGTTGCTCAGATTGATGCGGATGATGAAATTATTGTGATGCTGCATAAACATATAGTTGTGGATTACCAACAGAAAAAGGGGCATGAGCTAGTATTGCATATCTTGTACCATCTGGAGGCTCTGGCTGTGTCCGATTCAGTTGATAGTTCCACATTTGCTGTTATGTATGAAAAGTTCCTCCTGGCAGTGGCTAAGTGTTTGCTGGAGTCCTTTCCAGCCTCGGACAAGTCATTTAGTAGACTTCTTGGAGAAGTTCCAGTCCTTCCTGACTCCACTTTGAAACTACTAGATGATCTCTGCTATTCTGATGTTATTGATCAACATGGAAAAGATGTTCGGGACATTGAGCGTGTCACTCAGGGCCTTGGTGCTGTCTGGAGTTTAATTTTAGGGCGGCCACATTATCGACAAAGCTGCTTAGATATCACTTTGAAGTGTGCTGTTCATTCACAAGATGACATCCGAACCAAAGCTATCCGACTGGTGGCAAACAAACTCTATCAGTTGAATTACATATCAGAAGTTATTGAAAAATTTGCGACAGATATGTTGCTGTCTGCTGTTGAACAGCCTCTGTCGGGTATAGAGCATTCACAATCTGAGTCCACTGGGCAAAGAACTGTTGGAAAGTTTGGAAGCCAAGAAACATCAGTTAGTCATTTTCAAAATTTGGAGTCCGGAAATTCTGAAAATGATTCCACAACGAAGGACCAACCAGTGTCAACAATGTCAATTCCTGAAGTTCAGCGACTCATTTCTTTGTTTTTTGCTTTATGTACAAAGAAACCTAGCCTTATTCAACTTGTATTTAATACTTATGGGTGTGCCCCAAAAGCTGTAAAGCAGGCTTTTGATCGCCATATCCCTGTTCTTATAAGGGCCCTAGGGTCGTCAAATTCAGAATTGCTTCATATTATATCTGATCCTCCACAAGGAAGTGAAAACCTTTTGATGTTGGTGTTGCAACAATTGACTCAAGAGACAACACCGTCGTCTGATCTGATAGGCACTGTTAAACATTTGTATGAAACTAAATTAAAGGATGTCACAATTCTCATTCCAATGCTGTCTTCACTTGCTAAAAATGAGGTTTGTTTCAGAGATATTGTTTCTCTTCCTCTTGTAGTACATGGCATTATATGTTATTTTGTTAATTGTTTTTGGTTTAATAAACTTGTTTGCATGCGGGGCAATATTGTCACCTTAGAGTTTAGAAATTACTCCCTTTTAGCCTTGCTACTTATTTGGAAAGCTGCAGTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 ko04530 map03015 map04530
Pfam Domains
Protein Families
DUF3453 Symplekin_C

Protein Analysis

1168

Amino Acids

128.07

Weight (kDa)

5.17

Isoelectric Point (pI)

51.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SYMPK_PTA1_N PF11935 99 - 312 5.2e-39 Symplekin/PTA1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3116
AasI GACNNNNNNGTC 1 cut(s) 3229
AccB1I GGYRCC 1 cut(s) 767
AccI GTMKAC 1 cut(s) 2479
AccII CGCG 3 cut(s) 50, 189, 1012
AccIII TCCGGA 1 cut(s) 2918
AclWI GGATC 8 cut(s) 791, 1610, 1622, 1635, 1637, 1650, 2100, 3158
AcoI YGGCCR 5 cut(s) 3, 72, 1368, 1855, 2636
AcsI RAATTY 9 cut(s) 497, 660, 670, 1335, 1909, 2774, 2908, 2923, 3136
AcuI CTGAAG 6 cut(s) 680, 1326, 1530, 1914, 2097, 3000
AcyI GRCGYC 1 cut(s) 823
AfaI GTAC 6 cut(s) 255, 459, 883, 2348, 3019, 3369
AjnI CCWGG 5 cut(s) 463, 1071, 1429, 1638, 2421
AjuI GAANNNNNNNTTGG 2 cut(s) 3295, 3327
AloI GAACNNNNNNTCC 2 cut(s) 2559, 2591
Alw21I GWGCWC 2 cut(s) 147, 168
Alw26I GTCTC 4 cut(s) 93, 1497, 1518, 3215
AlwI GGATC 8 cut(s) 791, 1610, 1622, 1635, 1637, 1650, 2100, 3158
AlwNI CAGNNNCTG 5 cut(s) 1553, 1574, 1664, 2095, 2815
Aor13HI TCCGGA 1 cut(s) 2918
ApaI GGGCCC 2 cut(s) 928, 3124
ApeKI GCWGC 7 cut(s) 734, 830, 953, 1526, 2281, 2655, 3494
ApoI RAATTY 9 cut(s) 497, 660, 670, 1335, 1909, 2774, 2908, 2923, 3136
Asp700I GAANNNNTTC 1 cut(s) 3147
AspA2I CCTAGG 1 cut(s) 3124
AspLEI GCGC 2 cut(s) 1295, 2220
AspS9I GGNCC 9 cut(s) 924, 925, 1069, 1889, 1966, 2602, 2950, 3120, 3121
AsuHPI GGTGA 7 cut(s) 365, 439, 1083, 1265, 1270, 1674, 3433
AsuII TTCGAA 1 cut(s) 807
AvaII GGWCC 4 cut(s) 1069, 1889, 1966, 2950
AvrII CCTAGG 1 cut(s) 3124
AxyI CCTNAGG 1 cut(s) 2100
BaeGI GKGCMC 3 cut(s) 928, 3070, 3124
BalI TGGCCA 1 cut(s) 1857
BamHI GGATCC 2 cut(s) 1627, 1642
BanI GGYRCC 1 cut(s) 767
BanII GRGCYC 5 cut(s) 19, 147, 168, 928, 3124
BauI CACGAG 1 cut(s) 1947
BbsI GAAGAC 3 cut(s) 165, 686, 3303
Bbv12I GWGCWC 2 cut(s) 147, 168
BbvI GCAGC 7 cut(s) 746, 817, 940, 1513, 2268, 2642, 3481
BccI CCATC 7 cut(s) 128, 415, 1244, 1362, 1718, 1880, 2358
BceAI ACGGC 2 cut(s) 59, 79
BcgI CGANNNNNNTGC 2 cut(s) 2637, 2671
BciT130I CCWGG 5 cut(s) 465, 1073, 1431, 1640, 2423
BciVI GTATCC 3 cut(s) 848, 1198, 1690
BclI TGATCA 4 cut(s) 958, 1036, 2038, 2557
BcoDI GTCTC 4 cut(s) 93, 1497, 1518, 3215
BfaI CTAG 8 cut(s) 885, 1247, 2030, 2147, 2330, 2528, 3030, 3125
BfmI CTRYAG 2 cut(s) 315, 3495
BfuI GTATCC 3 cut(s) 848, 1198, 1690
BglII AGATCT 1 cut(s) 1933
BlnI CCTAGG 1 cut(s) 3124
Bme1390I CCNGG 5 cut(s) 465, 1073, 1431, 1640, 2423
Bme18I GGWCC 4 cut(s) 1069, 1889, 1966, 2950
BmgT120I GGNCC 9 cut(s) 924, 925, 1069, 1889, 1966, 2602, 2950, 3120, 3121
BmrFI CCNGG 5 cut(s) 465, 1073, 1431, 1640, 2423
BmrI ACTGGG 2 cut(s) 884, 2859
BmsI GCATC 9 cut(s) 427, 940, 1398, 1685, 1693, 2081, 2205, 2245, 2268
BmuI ACTGGG 2 cut(s) 884, 2859
BpiI GAAGAC 3 cut(s) 165, 686, 3303
BpmI CTGGAG 5 cut(s) 152, 1500, 2375, 2465, 2638
Bpu14I TTCGAA 1 cut(s) 807
BpuEI CTTGAG 3 cut(s) 250, 1759, 3201
BsaBI GATNNNNATC 1 cut(s) 795
BsaHI GRCGYC 1 cut(s) 823
BsaI GGTCTC 1 cut(s) 1497
BsaWI WCCGGW 2 cut(s) 375, 2918
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bse21I CCTNAGG 1 cut(s) 2100
Bse3DI GCAATG 5 cut(s) 243, 362, 450, 1172, 1295
Bse8I GATNNNNATC 1 cut(s) 795
BseAI TCCGGA 1 cut(s) 2918
BseBI CCWGG 5 cut(s) 465, 1073, 1431, 1640, 2423
BseJI GATNNNNATC 1 cut(s) 795
BseMI GCAATG 5 cut(s) 243, 362, 450, 1172, 1295
BseMII CTCAG 4 cut(s) 2091, 2261, 2612, 2832
BseRI GAGGAG 7 cut(s) 24, 27, 32, 233, 257, 368, 1889
BseSI GKGCMC 3 cut(s) 928, 3070, 3124
BseXI GCAGC 7 cut(s) 746, 817, 940, 1513, 2268, 2642, 3481
BseYI CCCAGC 1 cut(s) 944
BsgI GTGCAG 2 cut(s) 765, 1529
Bsh1236I CGCG 3 cut(s) 50, 189, 1012
Bsh1285I CGRYCG 1 cut(s) 1025
BshNI GGYRCC 1 cut(s) 767
BsiEI CGRYCG 1 cut(s) 1025
BsiHKAI GWGCWC 2 cut(s) 147, 168
BsiSI CCGG 3 cut(s) 6, 376, 2919
BslFI GGGAC 3 cut(s) 1082, 1979, 2594
BsmAI GTCTC 4 cut(s) 93, 1497, 1518, 3215
BsmBI CGTCTC 1 cut(s) 93
BsmFI GGGAC 3 cut(s) 1082, 1979, 2594
BsmI GAATGC 3 cut(s) 946, 2044, 2830
Bso31I GGTCTC 1 cut(s) 1497
Bsp119I TTCGAA 1 cut(s) 807
Bsp120I GGGCCC 2 cut(s) 924, 3120
Bsp1286I GDGCHC 6 cut(s) 19, 147, 168, 928, 3070, 3124
Bsp13I TCCGGA 1 cut(s) 2918
Bsp1407I TGTACA 1 cut(s) 3017
BspCNI CTCAG 4 cut(s) 2092, 2260, 2611, 2833
BspEI TCCGGA 1 cut(s) 2918
BspFNI CGCG 3 cut(s) 50, 189, 1012
BspHI TCATGA 3 cut(s) 1123, 1156, 3503
BspMAI CTGCAG 1 cut(s) 3499
BspPI GGATC 8 cut(s) 791, 1610, 1622, 1635, 1637, 1650, 2100, 3158
BspQI GCTCTTC 1 cut(s) 152
BspT104I TTCGAA 1 cut(s) 807
BspT107I GGYRCC 1 cut(s) 767
BspTNI GGTCTC 1 cut(s) 1497
BsrDI GCAATG 5 cut(s) 243, 362, 450, 1172, 1295
BsrGI TGTACA 1 cut(s) 3017
BssNI GRCGYC 1 cut(s) 823
BssSI CACGAG 1 cut(s) 1947
BssT1I CCWWGG 5 cut(s) 102, 1419, 1869, 2605, 3124
Bst2BI CACGAG 1 cut(s) 1947
Bst2UI CCWGG 5 cut(s) 465, 1073, 1431, 1640, 2423
Bst4CI ACNGT 9 cut(s) 1285, 1555, 1562, 1650, 1690, 1774, 2863, 3231, 3253
Bst6I CTCTTC 4 cut(s) 136, 152, 1101, 3360
BstACI GRCGYC 1 cut(s) 823
BstAPI GCANNNNNTGC 3 cut(s) 1301, 1664, 2231
BstAUI TGTACA 1 cut(s) 3017
BstBI TTCGAA 1 cut(s) 807
BstC8I GCNNGC 5 cut(s) 99, 489, 1302, 3087, 3425
BstDEI CTNAG 8 cut(s) 426, 2100, 2247, 2433, 2598, 2659, 2841, 3445
BstDSI CCRYGG 4 cut(s) 48, 61, 1266, 1646
BstENI CCTNNNNNAGG 3 cut(s) 1062, 1423, 3171
BstFNI CGCG 3 cut(s) 50, 189, 1012
BstHHI GCGC 2 cut(s) 1295, 2220
BstMAI GTCTC 4 cut(s) 93, 1497, 1518, 3215
BstMCI CGRYCG 1 cut(s) 1025
BstNI CCWGG 5 cut(s) 465, 1073, 1431, 1640, 2423
BstNSI RCATGY 2 cut(s) 631, 3427
BstSCI CCNGG 5 cut(s) 463, 1071, 1429, 1638, 2421
BstSFI CTRYAG 2 cut(s) 315, 3495
BstSLI GKGCMC 3 cut(s) 928, 3070, 3124
BstUI CGCG 3 cut(s) 50, 189, 1012
BstV1I GCAGC 7 cut(s) 746, 817, 940, 1513, 2268, 2642, 3481
BstV2I GAAGAC 3 cut(s) 165, 686, 3303
BstX2I RGATCY 5 cut(s) 1615, 1627, 1642, 1933, 2092
BstYI RGATCY 5 cut(s) 1615, 1627, 1642, 1933, 2092
Bsu36I CCTNAGG 1 cut(s) 2100
BsuI GTATCC 3 cut(s) 848, 1198, 1690
BtgI CCRYGG 4 cut(s) 48, 61, 1266, 1646
BtsI GCAGTG 2 cut(s) 2433, 3504
BtsIMutI CAGTG 8 cut(s) 544, 897, 1770, 2433, 2847, 2964, 3249, 3504
Cac8I GCNNGC 5 cut(s) 99, 489, 1302, 3087, 3425
CaiI CAGNNNCTG 5 cut(s) 1553, 1574, 1664, 2095, 2815
CciI TCATGA 3 cut(s) 1123, 1156, 3503
CfoI GCGC 2 cut(s) 1295, 2220
Cfr13I GGNCC 9 cut(s) 924, 925, 1069, 1889, 1966, 2602, 2950, 3120, 3121
Cfr42I CCGCGG 1 cut(s) 51
CseI GACGC 2 cut(s) 178, 831
CsiI ACCWGGT 1 cut(s) 1071
Csp6I GTAC 6 cut(s) 254, 458, 882, 2347, 3018, 3368
CviQI GTAC 6 cut(s) 254, 458, 882, 2347, 3018, 3368
DdeI CTNAG 8 cut(s) 426, 2100, 2247, 2433, 2598, 2659, 2841, 3445
DrdI GACNNNNNNGTC 1 cut(s) 3229
DseDI GACNNNNNNGTC 1 cut(s) 3229
EaeI YGGCCR 5 cut(s) 3, 72, 1368, 1855, 2636
Eam1104I CTCTTC 4 cut(s) 136, 152, 1101, 3360
EarI CTCTTC 4 cut(s) 136, 152, 1101, 3360
EciI GGCGGA 1 cut(s) 959
Ecl136II GAGCTC 2 cut(s) 145, 166
Eco130I CCWWGG 5 cut(s) 102, 1419, 1869, 2605, 3124
Eco24I GRGCYC 5 cut(s) 19, 147, 168, 928, 3124
Eco31I GGTCTC 1 cut(s) 1497
Eco32I GATATC 1 cut(s) 2665
Eco47I GGWCC 4 cut(s) 1069, 1889, 1966, 2950
Eco53kI GAGCTC 2 cut(s) 145, 166
Eco57I CTGAAG 6 cut(s) 680, 1326, 1530, 1914, 2097, 3000
Eco81I CCTNAGG 1 cut(s) 2100
EcoICRI GAGCTC 2 cut(s) 145, 166
EcoNI CCTNNNNNAGG 3 cut(s) 1062, 1423, 3171
EcoO109I RGGNCCY 7 cut(s) 924, 925, 1069, 1966, 2602, 3120, 3121
EcoRI GAATTC 1 cut(s) 660
EcoRII CCWGG 5 cut(s) 463, 1071, 1429, 1638, 2421
EcoRV GATATC 1 cut(s) 2665
EcoT14I CCWWGG 5 cut(s) 102, 1419, 1869, 2605, 3124
EcoT38I GRGCYC 5 cut(s) 19, 147, 168, 928, 3124
ErhI CCWWGG 5 cut(s) 102, 1419, 1869, 2605, 3124
Esp3I CGTCTC 1 cut(s) 93
FalI AAGNNNNNCTT 2 cut(s) 1953, 1985
FaqI GGGAC 3 cut(s) 1082, 1979, 2594
FauI CCCGC 2 cut(s) 194, 3420
FauNDI CATATG 1 cut(s) 511
FbaI TGATCA 4 cut(s) 958, 1036, 2038, 2557
FblI GTMKAC 1 cut(s) 2479
FriOI GRGCYC 5 cut(s) 19, 147, 168, 928, 3124
FspBI CTAG 8 cut(s) 885, 1247, 2030, 2147, 2330, 2528, 3030, 3125
GlaI GCGC 2 cut(s) 1294, 2219
GsaI CCCAGC 1 cut(s) 948
GsuI CTGGAG 5 cut(s) 152, 1500, 2375, 2465, 2638
HapII CCGG 3 cut(s) 6, 376, 2919
HgaI GACGC 2 cut(s) 178, 831
HhaI GCGC 2 cut(s) 1295, 2220
Hin1I GRCGYC 1 cut(s) 823
Hin6I GCGC 2 cut(s) 1293, 2218
HinP1I GCGC 2 cut(s) 1293, 2218
HincII GTYRAC 4 cut(s) 55, 1219, 2124, 2964
HindII GTYRAC 4 cut(s) 55, 1219, 2124, 2964
HindIII AAGCTT 1 cut(s) 1745
HpaII CCGG 3 cut(s) 6, 376, 2919
HphI GGTGA 7 cut(s) 365, 439, 1083, 1265, 1270, 1674, 3433
Hpy99I CGWCG 2 cut(s) 1638, 3235
HpyCH4III ACNGT 9 cut(s) 1285, 1555, 1562, 1650, 1690, 1774, 2863, 3231, 3253
HpyF3I CTNAG 8 cut(s) 426, 2100, 2247, 2433, 2598, 2659, 2841, 3445
Hsp92I GRCGYC 1 cut(s) 823
HspAI GCGC 2 cut(s) 1293, 2218
Kpn2I TCCGGA 1 cut(s) 2918
Ksp22I TGATCA 4 cut(s) 958, 1036, 2038, 2557
KspI CCGCGG 1 cut(s) 51
LguI GCTCTTC 1 cut(s) 152
LmnI GCTCC 4 cut(s) 14, 171, 1270, 2137
Lsp1109I GCAGC 7 cut(s) 746, 817, 940, 1513, 2268, 2642, 3481
LweI GCATC 9 cut(s) 427, 940, 1398, 1685, 1693, 2081, 2205, 2245, 2268
MabI ACCWGGT 1 cut(s) 1071
MaeI CTAG 8 cut(s) 885, 1247, 2030, 2147, 2330, 2528, 3030, 3125
MaeIII GTNAC 6 cut(s) 1258, 1765, 1789, 2593, 3286, 3439
MfeI CAATTG 4 cut(s) 711, 724, 1838, 3209
MflI RGATCY 5 cut(s) 1615, 1627, 1642, 1933, 2092
MhlI GDGCHC 6 cut(s) 19, 147, 168, 928, 3070, 3124
MlsI TGGCCA 1 cut(s) 1857
MluNI TGGCCA 1 cut(s) 1857
MmeI TCCRAC 3 cut(s) 1520, 2743, 2845
Mox20I TGGCCA 1 cut(s) 1857
MroI TCCGGA 1 cut(s) 2918
MroXI GAANNNNTTC 1 cut(s) 3147
MscI TGGCCA 1 cut(s) 1857
MslI CAYNNNNRTG 4 cut(s) 632, 2193, 3264, 3302
Msp20I TGGCCA 1 cut(s) 1857
MspA1I CMGCKG 2 cut(s) 50, 686
MspI CCGG 3 cut(s) 6, 376, 2919
MspR9I CCNGG 5 cut(s) 465, 1073, 1431, 1640, 2423
MunI CAATTG 4 cut(s) 711, 724, 1838, 3209
Mva1269I GAATGC 3 cut(s) 946, 2044, 2830
MvaI CCWGG 5 cut(s) 465, 1073, 1431, 1640, 2423
MvnI CGCG 3 cut(s) 50, 189, 1012
NdeI CATATG 1 cut(s) 511
NmeAIII GCCGAG 2 cut(s) 166, 1426
NmuCI GTSAC 5 cut(s) 1258, 1765, 2593, 3286, 3439
NspI RCATGY 2 cut(s) 631, 3427
NspV TTCGAA 1 cut(s) 807
PaeI GCATGC 1 cut(s) 3427
PagI TCATGA 3 cut(s) 1123, 1156, 3503
PciSI GCTCTTC 1 cut(s) 152
PcsI WCGNNNNNNNCGW 1 cut(s) 213
PctI GAATGC 3 cut(s) 946, 2044, 2830
PdmI GAANNNNTTC 1 cut(s) 3147
PpuMI RGGWCCY 2 cut(s) 1069, 1966
PsiI TTATAA 1 cut(s) 3116
Psp124BI GAGCTC 2 cut(s) 147, 168
Psp5II RGGWCCY 2 cut(s) 1069, 1966
Psp6I CCWGG 5 cut(s) 463, 1071, 1429, 1638, 2421
PspFI CCCAGC 1 cut(s) 944
PspGI CCWGG 5 cut(s) 463, 1071, 1429, 1638, 2421
PspOMI GGGCCC 2 cut(s) 924, 3120
PspPI GGNCC 9 cut(s) 924, 925, 1069, 1889, 1966, 2602, 2950, 3120, 3121
PspPPI RGGWCCY 2 cut(s) 1069, 1966
PsrI GAACNNNNNNTAC 2 cut(s) 2399, 2431
PstI CTGCAG 1 cut(s) 3499
PstNI CAGNNNCTG 5 cut(s) 1553, 1574, 1664, 2095, 2815
PsuI RGATCY 5 cut(s) 1615, 1627, 1642, 1933, 2092
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 6 cut(s) 255, 459, 883, 2348, 3019, 3369
RsaNI GTAC 6 cut(s) 254, 458, 882, 2347, 3018, 3368
RseI CAYNNNNRTG 4 cut(s) 632, 2193, 3264, 3302
SacI GAGCTC 2 cut(s) 147, 168
SacII CCGCGG 1 cut(s) 51
SapI GCTCTTC 1 cut(s) 152
Sau96I GGNCC 9 cut(s) 924, 925, 1069, 1889, 1966, 2602, 2950, 3120, 3121
ScrFI CCNGG 5 cut(s) 465, 1073, 1431, 1640, 2423
SduI GDGCHC 6 cut(s) 19, 147, 168, 928, 3070, 3124
SexAI ACCWGGT 1 cut(s) 1071
SfaNI GCATC 9 cut(s) 427, 940, 1398, 1685, 1693, 2081, 2205, 2245, 2268
SfcI CTRYAG 2 cut(s) 315, 3495
Sfr303I CCGCGG 1 cut(s) 51
SfuI TTCGAA 1 cut(s) 807
SgrBI CCGCGG 1 cut(s) 51
SinI GGWCC 4 cut(s) 1069, 1889, 1966, 2950
SmiMI CAYNNNNRTG 4 cut(s) 632, 2193, 3264, 3302
SmlI CTYRAG 3 cut(s) 229, 1738, 3216
SmoI CTYRAG 3 cut(s) 229, 1738, 3216
SphI GCATGC 1 cut(s) 3427
SspI AATATT 2 cut(s) 586, 3436
SspMI CTAG 8 cut(s) 885, 1247, 2030, 2147, 2330, 2528, 3030, 3125
SstI GAGCTC 2 cut(s) 147, 168
StyD4I CCNGG 5 cut(s) 463, 1071, 1429, 1638, 2421
StyI CCWWGG 5 cut(s) 102, 1419, 1869, 2605, 3124
TaaI ACNGT 9 cut(s) 1285, 1555, 1562, 1650, 1690, 1774, 2863, 3231, 3253
TaqI TCGA 9 cut(s) 123, 162, 207, 216, 390, 807, 1346, 2236, 2647
TaqII GACCGA 1 cut(s) 1011
TatI WGTACW 5 cut(s) 253, 457, 881, 3017, 3367
TauI GCSGC 4 cut(s) 50, 140, 1414, 2638
TscAI CASTG 8 cut(s) 544, 897, 1777, 2433, 2854, 2964, 3256, 3504
TseFI GTSAC 5 cut(s) 1258, 1765, 2593, 3286, 3439
TseI GCWGC 7 cut(s) 734, 830, 953, 1526, 2281, 2655, 3494
Tsp45I GTSAC 5 cut(s) 1258, 1765, 2593, 3286, 3439
TspGWI ACGGA 1 cut(s) 1236
TspRI CASTG 8 cut(s) 544, 897, 1777, 2433, 2854, 2964, 3256, 3504
VpaK11BI GGWCC 4 cut(s) 1069, 1889, 1966, 2950
XagI CCTNNNNNAGG 3 cut(s) 1062, 1423, 3171
XapI RAATTY 9 cut(s) 497, 660, 670, 1335, 1909, 2774, 2908, 2923, 3136
XbaI TCTAGA 1 cut(s) 2029
XceI RCATGY 2 cut(s) 631, 3427
XmaJI CCTAGG 1 cut(s) 3124
XmiI GTMKAC 1 cut(s) 2479
XmnI GAANNNNTTC 1 cut(s) 3147
XspI CTAG 8 cut(s) 885, 1247, 2030, 2147, 2330, 2528, 3030, 3125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.