Rh7DG420500

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0006768
Physical Location & Seq
Reverse (-)
59329367 .. 59346362
16996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG420500.1

Sequence Viewer

Length: 3510 bp
ATGGCCGGAGGAGGAGGAGCTCTAAACACCCAAGCGCTCTCTCTCCTCGCCGCAGTCAACAACCACGGCGATTTGGCCGTCAAGCTCTCGTCTCTAAAGCAGGCCAAGGATTTGCTCTTGTCCATCGACCCCTCTTCTGCCGCCGAGCTCTTCCCCTACTTGGTCGAGCTCCAGTCTTCCCCTGAAACCCTCGTCCGCTTATCGCTTATCGAGGTAATCGAGGAGATTGGCTTGAGAGTAATGGAGGAGTCATCTGTACTGATGTCTGTCCTATTTGCATTTTTGAGAGATAGTGATTCTATTGTTGCGAGGCAATCTATAGTTAGTGGCACAAATGTCTTTGTTGGTGTTTTGGAGGAGATGACATTGCAGTTTCACCGGAGGGGTAAAATCGAGATATGGCTTGAAGAACTTTGGTCGTGGATGGCTAAGTTCAAGGATGCCATATTCACCATTGCAGTACAGCCTGGTTCTGCTGGAACAAAGTTGCTTGCGTTGAAATTTTTGGAAACATATGTTTTGCTATTCACATCAGACACCAGTGATTCTGAAAAACCTACCGCAGAAGGATGTAGAAGGGGTTTTAATATTTCGTGGCTGGTTGGTGGACACCCTATTCTTGACTCACACATGCTCATGTTAGAAGCAAATAGAGCTCTTGGAATTCTATTGAATTTGTTGCAGTCAGCTGGTAGTCTTCAGGGTTCCTTGACAATTGCCATTGTCAATTGTCTTGCAGCCATAGCAAGAAAGAGGCCAGTTCACTATGGCACCATTGTTTCTGCACTATTTGATTTTGATCCAAACTTCGAATTAGTAAAAGGACGCCATGCTGCCAGTATCCAGTATTCTTTAAGAACTGCCTTTTTGGGATTCCTTCGGTGTACTAGCCCAGTGATTGTAGAGTCAAGAGATAGATTGATTAGGGCCCTACGCTCTATGAATGCTGGGGATGCTGCTGATCAAGTAATCCGCCAAGTTGATAAAATGCTAAAAAACAATGAGAGGGCTTCGCGTGATTCTCGGTCGGGAAAGGATGATCAATTATCAAGCCAACTGCCTGTTTCAGGGGACCTGGTAAGAAAAAGACCTTCACCTCTTGATGTTGAAGAGTCAGCTAATGGTCATGAGATACCTTCCAAGCGAAGTCGTTATGTTCATGAAGCCTATTCAGCATTGCCAGTTCAAAAGAATGATTCTGGGTGGGATACCACTTCTGTCAACGGAGTGTCCTCTGACCTTCCTATGCTAGATGGTGAGGTGACTCCCGTGGAGCAAATGATTACTGTAATTGGCGCGTTGCTTGCTGAAGGAGAAAGAGGCGCTGAATCACTTGAAATTCTTGTTTCGACAATCCATCCTGATCTGTTGGCCGATATTGTAATAACTAATATGAGGCACTTGCCGAAGATGCCGCCACCCTTGGCAAGGCCAGGGTTGCCAGTTGCTCGGCAGATAGGTTCTTTAAGTAGTTCGGCACAAGTTGTTTCAGGGTCTCCAACATCATCTGTGCAGTCTCCAGTTTTGGCTGCCCAAATGTCTTTTTCTTCAGCAACTGTAAACAGTTTATCAGGTGCTGATACTTCCAATGTGAATAATCTTCCTGATTCCAAGCGAGATCCACGAAGGGATCCCCGTCGCCTGGATCCACGGTGTATAGCAGTTTCTGCTGAACTGGCATCCTCACCCACAGTAGAGGATACTGATGCTATGCAATCTGACATTGATGGTTCAATTTCCTTGAGTAAGCTTAATTCGCTTCCTGTTGTGACCACTGTTGAATCTACTTCAGTAACTCCCAAGCCCAAAACAGAAAGTGATGATACGATTTTGGATAGTCAATTGGTTTCTGGAACTGGCCAACCAACTCCCAAGGAGGAGGTTCTGGATGGACCTGTGGAAGATGACCCAAATTTGAAGGTCAATGTATCTTCAGATCTAACAGATTCTCGTGTGCAAATTGAAGGGGACCTTGACACAATGCCATTGTCAGATGTTGAAGTAAAAGATGAAGCTTATACCACATCTTTTCTAGAATCTGATCAGCATTCTCCTGCTCTTTCAAACACATCTGCATCTGAAGATATATGTCAGGATCTGCCTGAGGTTCCCATATATATTGAGTTGACCCAAGAGCAGGAGCAAAGACTAGGGCATTTGGCTGTTGAGCGAATTATTCAATCATACAAGCATTTGCATGGAACAGATTATAGTCAGATGCGCTTGGCATTACTTGCTCGATTGGTTGCTCAGATTGATGCGGATGATGAAATTATTGTGATGCTGCATAAACATATAGTTGTGGATTACCAACAGAAAAAGGGGCATGAGCTAGTATTGCATATCTTGTACCATCTGGAGGCTCTCGCTGTGTCCGATTCAGTTGATAGTTCCACATTTGCTGTTATGTATGAAAAGTTCCTCCTGGCAGTGGCTAAGTGTTTGCTGGAGTCCTTTCCAGCCTCGGACAAGTCATTTAGTAGACTTCTTGGAGAAGTTCCAGTCCTTCCTGACTCCACTTTGAAACTACTAGATGATCTCTGCTATTCTGATGTTATTGATCAACATGGAAAAGATGTTCGGGACATTGAGCGTGTCACTCAGGGCCTTGGTGCTGTCTGGAGTTTAATTTTAGGGCGGCCACATTATCGACAAAGCTGTTTAGATATCACTTTGAAGTGTGCTGTTCATTCACAAGATGACATCCGAACCAAAGCTATCCGACTGGTGGCAAACAAACTCTATCAGTTGAATTACATATCAGAAGTTATTGAAAAATTTGCGACAGATATGTTGCTGTCTGCTGTTGAACAGCCTCTGTCGGGTATAGAGCATTCACAATCTGAGTCCACTGGGCAAAGAACTGATGGAAAGTTTGGAAGCCAAGAAACATCAGTTAGTCATTTTCAAAATTTGGAGTCCGGAAATTCTGAAAATGATTCCACAACGAAGGACCAACCAGTGTCAACAATGTCAATTCCTGAAGTTCAGCGACTCATTTCTTTGTTTTTTGCTTTATGTACAAAGAAACCTAGCCTTATTCAGCTTGTATTTAATACTTATGGGTGTGCCCCAAAAGCTGTAAAGCAGGCTTTTGATCGCCATATCCCTGTTCTTATAAGGGCCCTAGGGTCGTCAAATTCAGAATTGCTTCATATTATATCTGATCCTCCACAAGGAAGTGAAAACCTTTTGATGTTGGTGTTGCAACAATTGACTCAAGAGACAACACCGTCGTCTGATCTGATAGGCACTGTTAAACATTTGTATGAAACTAAATTAAAGGATGTCACAATTCTCATTCCAATGCTGTCTTCACTTGCTAAAAATGAGGTTTGTTTCATAGATATTGTTTCTCTTCCTCTTGTAGTACGTGGCATTATATGTTATTTTGTTAATTGTTTTTGGTTTAATAAGCTTGTTTGCATGCGGGGCAATATTGTCACCTTAGAGTTTAGAAATTACTCCCTTTTAGCCTTGCTACTTATTTGGAAAGCTGCAGTGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 ko04530 map03015 map04530
Pfam Domains
Protein Families
DUF3453 Symplekin_C

Protein Analysis

1169

Amino Acids

128.09

Weight (kDa)

5.14

Isoelectric Point (pI)

49.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SYMPK_PTA1_N PF11935 100 - 313 3.5e-38 Symplekin/PTA1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3119
AasI GACNNNNNNGTC 1 cut(s) 3232
AccB1I GGYRCC 1 cut(s) 770
AccI GTMKAC 1 cut(s) 2482
AccII CGCG 2 cut(s) 1015, 1298
AccIII TCCGGA 1 cut(s) 2921
AciI CCGC 9 cut(s) 51, 141, 196, 561, 973, 1415, 2261, 2638, 3430
AclWI GGATC 8 cut(s) 794, 1613, 1625, 1638, 1640, 1653, 2103, 3161
AcoI YGGCCR 5 cut(s) 3, 75, 1371, 1858, 2639
AcsI RAATTY 9 cut(s) 500, 663, 673, 1338, 1912, 2777, 2911, 2926, 3139
AcuI CTGAAG 7 cut(s) 683, 1329, 1533, 1773, 1917, 2100, 3003
AcyI GRCGYC 1 cut(s) 826
AfaI GTAC 6 cut(s) 258, 462, 886, 2351, 3022, 3372
AfeI AGCGCT 1 cut(s) 36
AjnI CCWGG 5 cut(s) 466, 1074, 1432, 1641, 2424
AjuI GAANNNNNNNTTGG 2 cut(s) 3298, 3330
AloI GAACNNNNNNTCC 2 cut(s) 2562, 2594
Alw21I GWGCWC 4 cut(s) 22, 150, 171, 658
Alw26I GTCTC 4 cut(s) 96, 1500, 1521, 3218
AlwI GGATC 8 cut(s) 794, 1613, 1625, 1638, 1640, 1653, 2103, 3161
AlwNI CAGNNNCTG 5 cut(s) 1556, 1577, 1667, 2098, 2818
Aor13HI TCCGGA 1 cut(s) 2921
Aor51HI AGCGCT 1 cut(s) 36
ApaI GGGCCC 2 cut(s) 931, 3127
ApeKI GCWGC 6 cut(s) 737, 833, 956, 1529, 2284, 3497
ApoI RAATTY 9 cut(s) 500, 663, 673, 1338, 1912, 2777, 2911, 2926, 3139
Asp700I GAANNNNTTC 1 cut(s) 3150
AspA2I CCTAGG 1 cut(s) 3127
AspLEI GCGC 4 cut(s) 37, 1298, 1325, 2223
AspS9I GGNCC 9 cut(s) 927, 928, 1072, 1892, 1969, 2605, 2953, 3123, 3124
AsuHPI GGTGA 7 cut(s) 368, 442, 1086, 1268, 1273, 1677, 3436
AsuII TTCGAA 1 cut(s) 810
AvaII GGWCC 4 cut(s) 1072, 1892, 1969, 2953
AvrII CCTAGG 1 cut(s) 3127
AxyI CCTNAGG 1 cut(s) 2103
BaeGI GKGCMC 3 cut(s) 931, 3073, 3127
BalI TGGCCA 1 cut(s) 1860
BamHI GGATCC 2 cut(s) 1630, 1645
BanI GGYRCC 1 cut(s) 770
BanII GRGCYC 6 cut(s) 22, 150, 171, 658, 931, 3127
BauI CACGAG 1 cut(s) 1950
BbsI GAAGAC 3 cut(s) 168, 689, 3306
Bbv12I GWGCWC 4 cut(s) 22, 150, 171, 658
BbvI GCAGC 6 cut(s) 749, 820, 943, 1516, 2271, 3484
BccI CCATC 8 cut(s) 131, 418, 1247, 1365, 1721, 1883, 2361, 2861
BceAI ACGGC 2 cut(s) 62, 82
BciT130I CCWGG 5 cut(s) 468, 1076, 1434, 1643, 2426
BciVI GTATCC 3 cut(s) 851, 1201, 1693
BclI TGATCA 4 cut(s) 961, 1039, 2041, 2560
BcoDI GTCTC 4 cut(s) 96, 1500, 1521, 3218
BfaI CTAG 8 cut(s) 888, 1250, 2033, 2150, 2333, 2531, 3033, 3128
BfmI CTRYAG 2 cut(s) 318, 3498
BfoI RGCGCY 2 cut(s) 38, 1326
BfuI GTATCC 3 cut(s) 851, 1201, 1693
BglII AGATCT 1 cut(s) 1936
BlnI CCTAGG 1 cut(s) 3127
Bme1390I CCNGG 5 cut(s) 468, 1076, 1434, 1643, 2426
Bme18I GGWCC 4 cut(s) 1072, 1892, 1969, 2953
BmgT120I GGNCC 9 cut(s) 927, 928, 1072, 1892, 1969, 2605, 2953, 3123, 3124
BmiI GGNNCC 9 cut(s) 706, 772, 929, 1073, 1632, 1647, 1970, 2109, 3125
BmrFI CCNGG 5 cut(s) 468, 1076, 1434, 1643, 2426
BmrI ACTGGG 2 cut(s) 887, 2862
BmsI GCATC 9 cut(s) 430, 943, 1401, 1688, 1696, 2084, 2208, 2248, 2271
BmuI ACTGGG 2 cut(s) 887, 2862
BpiI GAAGAC 3 cut(s) 168, 689, 3306
BpmI CTGGAG 5 cut(s) 155, 1503, 2378, 2468, 2641
Bpu14I TTCGAA 1 cut(s) 810
BpuEI CTTGAG 3 cut(s) 253, 1762, 3204
BsaAI YACGTR 1 cut(s) 3374
BsaBI GATNNNNATC 1 cut(s) 798
BsaHI GRCGYC 1 cut(s) 826
BsaI GGTCTC 1 cut(s) 1500
BsaWI WCCGGW 2 cut(s) 378, 2921
Bse21I CCTNAGG 1 cut(s) 2103
Bse3DI GCAATG 3 cut(s) 365, 453, 1175
Bse8I GATNNNNATC 1 cut(s) 798
BseAI TCCGGA 1 cut(s) 2921
BseBI CCWGG 5 cut(s) 468, 1076, 1434, 1643, 2426
BseJI GATNNNNATC 1 cut(s) 798
BseMI GCAATG 3 cut(s) 365, 453, 1175
BseMII CTCAG 4 cut(s) 2094, 2264, 2615, 2835
BseRI GAGGAG 8 cut(s) 24, 27, 30, 35, 236, 260, 371, 1892
BseSI GKGCMC 3 cut(s) 931, 3073, 3127
BseXI GCAGC 6 cut(s) 749, 820, 943, 1516, 2271, 3484
BseYI CCCAGC 1 cut(s) 947
BsgI GTGCAG 2 cut(s) 768, 1532
Bsh1236I CGCG 2 cut(s) 1015, 1298
Bsh1285I CGRYCG 1 cut(s) 1028
BshNI GGYRCC 1 cut(s) 770
BsiEI CGRYCG 1 cut(s) 1028
BsiHKAI GWGCWC 4 cut(s) 22, 150, 171, 658
BsiSI CCGG 3 cut(s) 6, 379, 2922
BslFI GGGAC 3 cut(s) 1085, 1982, 2597
BsmAI GTCTC 4 cut(s) 96, 1500, 1521, 3218
BsmBI CGTCTC 1 cut(s) 96
BsmFI GGGAC 3 cut(s) 1085, 1982, 2597
BsmI GAATGC 3 cut(s) 949, 2047, 2833
Bso31I GGTCTC 1 cut(s) 1500
Bsp119I TTCGAA 1 cut(s) 810
Bsp120I GGGCCC 2 cut(s) 927, 3123
Bsp1286I GDGCHC 7 cut(s) 22, 150, 171, 658, 931, 3073, 3127
Bsp13I TCCGGA 1 cut(s) 2921
Bsp1407I TGTACA 1 cut(s) 3020
BspACI CCGC 9 cut(s) 51, 141, 196, 561, 973, 1415, 2261, 2638, 3430
BspCNI CTCAG 4 cut(s) 2095, 2263, 2614, 2836
BspEI TCCGGA 1 cut(s) 2921
BspFNI CGCG 2 cut(s) 1015, 1298
BspHI TCATGA 3 cut(s) 1126, 1159, 3506
BspLI GGNNCC 9 cut(s) 706, 772, 929, 1073, 1632, 1647, 1970, 2109, 3125
BspMAI CTGCAG 1 cut(s) 3502
BspPI GGATC 8 cut(s) 794, 1613, 1625, 1638, 1640, 1653, 2103, 3161
BspQI GCTCTTC 1 cut(s) 155
BspT104I TTCGAA 1 cut(s) 810
BspT107I GGYRCC 1 cut(s) 770
BspTNI GGTCTC 1 cut(s) 1500
BsrDI GCAATG 3 cut(s) 365, 453, 1175
BsrGI TGTACA 1 cut(s) 3020
BssNI GRCGYC 1 cut(s) 826
BssSI CACGAG 1 cut(s) 1950
BssT1I CCWWGG 5 cut(s) 105, 1422, 1872, 2608, 3127
Bst2BI CACGAG 1 cut(s) 1950
Bst2UI CCWGG 5 cut(s) 468, 1076, 1434, 1643, 2426
Bst4CI ACNGT 8 cut(s) 1288, 1558, 1565, 1653, 1693, 1777, 3234, 3256
Bst6I CTCTTC 4 cut(s) 139, 155, 1104, 3363
BstACI GRCGYC 1 cut(s) 826
BstAPI GCANNNNNTGC 2 cut(s) 1667, 2234
BstAUI TGTACA 1 cut(s) 3020
BstBAI YACGTR 1 cut(s) 3374
BstBI TTCGAA 1 cut(s) 810
BstC8I GCNNGC 5 cut(s) 102, 492, 1305, 3090, 3428
BstDEI CTNAG 7 cut(s) 429, 2103, 2250, 2436, 2601, 2844, 3448
BstDSI CCRYGG 3 cut(s) 64, 1269, 1649
BstENI CCTNNNNNAGG 3 cut(s) 1065, 1426, 3174
BstFNI CGCG 2 cut(s) 1015, 1298
BstH2I RGCGCY 2 cut(s) 38, 1326
BstHHI GCGC 4 cut(s) 37, 1298, 1325, 2223
BstMAI GTCTC 4 cut(s) 96, 1500, 1521, 3218
BstMCI CGRYCG 1 cut(s) 1028
BstNI CCWGG 5 cut(s) 468, 1076, 1434, 1643, 2426
BstNSI RCATGY 2 cut(s) 634, 3430
BstSCI CCNGG 5 cut(s) 466, 1074, 1432, 1641, 2424
BstSFI CTRYAG 2 cut(s) 318, 3498
BstSLI GKGCMC 3 cut(s) 931, 3073, 3127
BstUI CGCG 2 cut(s) 1015, 1298
BstV1I GCAGC 6 cut(s) 749, 820, 943, 1516, 2271, 3484
BstV2I GAAGAC 3 cut(s) 168, 689, 3306
BstX2I RGATCY 5 cut(s) 1618, 1630, 1645, 1936, 2095
BstYI RGATCY 5 cut(s) 1618, 1630, 1645, 1936, 2095
Bsu36I CCTNAGG 1 cut(s) 2103
BsuI GTATCC 3 cut(s) 851, 1201, 1693
BtgI CCRYGG 3 cut(s) 64, 1269, 1649
BtsI GCAGTG 2 cut(s) 2436, 3507
BtsIMutI CAGTG 8 cut(s) 547, 900, 1773, 2436, 2850, 2967, 3252, 3507
Cac8I GCNNGC 5 cut(s) 102, 492, 1305, 3090, 3428
CaiI CAGNNNCTG 5 cut(s) 1556, 1577, 1667, 2098, 2818
CciI TCATGA 3 cut(s) 1126, 1159, 3506
CfoI GCGC 4 cut(s) 37, 1298, 1325, 2223
Cfr13I GGNCC 9 cut(s) 927, 928, 1072, 1892, 1969, 2605, 2953, 3123, 3124
CseI GACGC 1 cut(s) 834
CsiI ACCWGGT 1 cut(s) 1074
Csp6I GTAC 6 cut(s) 257, 461, 885, 2350, 3021, 3371
CviQI GTAC 6 cut(s) 257, 461, 885, 2350, 3021, 3371
DdeI CTNAG 7 cut(s) 429, 2103, 2250, 2436, 2601, 2844, 3448
DrdI GACNNNNNNGTC 1 cut(s) 3232
DseDI GACNNNNNNGTC 1 cut(s) 3232
EaeI YGGCCR 5 cut(s) 3, 75, 1371, 1858, 2639
Eam1104I CTCTTC 4 cut(s) 139, 155, 1104, 3363
EarI CTCTTC 4 cut(s) 139, 155, 1104, 3363
EciI GGCGGA 1 cut(s) 962
Ecl136II GAGCTC 4 cut(s) 20, 148, 169, 656
Eco130I CCWWGG 5 cut(s) 105, 1422, 1872, 2608, 3127
Eco24I GRGCYC 6 cut(s) 22, 150, 171, 658, 931, 3127
Eco31I GGTCTC 1 cut(s) 1500
Eco32I GATATC 1 cut(s) 2668
Eco47I GGWCC 4 cut(s) 1072, 1892, 1969, 2953
Eco47III AGCGCT 1 cut(s) 36
Eco53kI GAGCTC 4 cut(s) 20, 148, 169, 656
Eco57I CTGAAG 7 cut(s) 683, 1329, 1533, 1773, 1917, 2100, 3003
Eco81I CCTNAGG 1 cut(s) 2103
EcoICRI GAGCTC 4 cut(s) 20, 148, 169, 656
EcoNI CCTNNNNNAGG 3 cut(s) 1065, 1426, 3174
EcoO109I RGGNCCY 7 cut(s) 927, 928, 1072, 1969, 2605, 3123, 3124
EcoRI GAATTC 1 cut(s) 663
EcoRII CCWGG 5 cut(s) 466, 1074, 1432, 1641, 2424
EcoRV GATATC 1 cut(s) 2668
EcoT14I CCWWGG 5 cut(s) 105, 1422, 1872, 2608, 3127
EcoT38I GRGCYC 6 cut(s) 22, 150, 171, 658, 931, 3127
ErhI CCWWGG 5 cut(s) 105, 1422, 1872, 2608, 3127
Esp3I CGTCTC 1 cut(s) 96
FalI AAGNNNNNCTT 2 cut(s) 1956, 1988
FaqI GGGAC 3 cut(s) 1085, 1982, 2597
FauI CCCGC 1 cut(s) 3423
FauNDI CATATG 1 cut(s) 514
FbaI TGATCA 4 cut(s) 961, 1039, 2041, 2560
FblI GTMKAC 1 cut(s) 2482
FriOI GRGCYC 6 cut(s) 22, 150, 171, 658, 931, 3127
FspBI CTAG 8 cut(s) 888, 1250, 2033, 2150, 2333, 2531, 3033, 3128
GlaI GCGC 4 cut(s) 36, 1297, 1324, 2222
GsaI CCCAGC 1 cut(s) 951
GsuI CTGGAG 5 cut(s) 155, 1503, 2378, 2468, 2641
HaeII RGCGCY 2 cut(s) 38, 1326
HapII CCGG 3 cut(s) 6, 379, 2922
HgaI GACGC 1 cut(s) 834
HhaI GCGC 4 cut(s) 37, 1298, 1325, 2223
Hin1I GRCGYC 1 cut(s) 826
Hin6I GCGC 4 cut(s) 35, 1296, 1323, 2221
HinP1I GCGC 4 cut(s) 35, 1296, 1323, 2221
HincII GTYRAC 4 cut(s) 58, 1222, 2127, 2967
HindII GTYRAC 4 cut(s) 58, 1222, 2127, 2967
HindIII AAGCTT 3 cut(s) 1748, 2013, 3416
HpaII CCGG 3 cut(s) 6, 379, 2922
HphI GGTGA 7 cut(s) 368, 442, 1086, 1268, 1273, 1677, 3436
Hpy99I CGWCG 2 cut(s) 1641, 3238
HpyCH4III ACNGT 8 cut(s) 1288, 1558, 1565, 1653, 1693, 1777, 3234, 3256
HpyCH4IV ACGT 1 cut(s) 3373
HpyF3I CTNAG 7 cut(s) 429, 2103, 2250, 2436, 2601, 2844, 3448
HpySE526I ACGT 1 cut(s) 3373
Hsp92I GRCGYC 1 cut(s) 826
HspAI GCGC 4 cut(s) 35, 1296, 1323, 2221
Kpn2I TCCGGA 1 cut(s) 2921
Ksp22I TGATCA 4 cut(s) 961, 1039, 2041, 2560
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 4 cut(s) 17, 174, 1273, 2140
Lsp1109I GCAGC 6 cut(s) 749, 820, 943, 1516, 2271, 3484
LweI GCATC 9 cut(s) 430, 943, 1401, 1688, 1696, 2084, 2208, 2248, 2271
MabI ACCWGGT 1 cut(s) 1074
MaeI CTAG 8 cut(s) 888, 1250, 2033, 2150, 2333, 2531, 3033, 3128
MaeII ACGT 1 cut(s) 3373
MaeIII GTNAC 6 cut(s) 1261, 1768, 1792, 2596, 3289, 3442
MfeI CAATTG 4 cut(s) 714, 727, 1841, 3212
MflI RGATCY 5 cut(s) 1618, 1630, 1645, 1936, 2095
MhlI GDGCHC 7 cut(s) 22, 150, 171, 658, 931, 3073, 3127
MlsI TGGCCA 1 cut(s) 1860
MluNI TGGCCA 1 cut(s) 1860
MmeI TCCRAC 2 cut(s) 1523, 2746
Mox20I TGGCCA 1 cut(s) 1860
MroI TCCGGA 1 cut(s) 2921
MroXI GAANNNNTTC 1 cut(s) 3150
MscI TGGCCA 1 cut(s) 1860
MslI CAYNNNNRTG 4 cut(s) 635, 2196, 3267, 3305
Msp20I TGGCCA 1 cut(s) 1860
MspA1I CMGCKG 1 cut(s) 689
MspI CCGG 3 cut(s) 6, 379, 2922
MspR9I CCNGG 5 cut(s) 468, 1076, 1434, 1643, 2426
MunI CAATTG 4 cut(s) 714, 727, 1841, 3212
Mva1269I GAATGC 3 cut(s) 949, 2047, 2833
MvaI CCWGG 5 cut(s) 468, 1076, 1434, 1643, 2426
MvnI CGCG 2 cut(s) 1015, 1298
NdeI CATATG 1 cut(s) 514
NlaIV GGNNCC 9 cut(s) 706, 772, 929, 1073, 1632, 1647, 1970, 2109, 3125
NmeAIII GCCGAG 2 cut(s) 169, 1429
NmuCI GTSAC 5 cut(s) 1261, 1768, 2596, 3289, 3442
NspI RCATGY 2 cut(s) 634, 3430
NspV TTCGAA 1 cut(s) 810
PaeI GCATGC 1 cut(s) 3430
PagI TCATGA 3 cut(s) 1126, 1159, 3506
PciSI GCTCTTC 1 cut(s) 155
PcsI WCGNNNNNNNCGW 2 cut(s) 216, 2373
PctI GAATGC 3 cut(s) 949, 2047, 2833
PdmI GAANNNNTTC 1 cut(s) 3150
Ppu21I YACGTR 1 cut(s) 3374
PpuMI RGGWCCY 2 cut(s) 1072, 1969
PsiI TTATAA 1 cut(s) 3119
Psp124BI GAGCTC 4 cut(s) 22, 150, 171, 658
Psp5II RGGWCCY 2 cut(s) 1072, 1969
Psp6I CCWGG 5 cut(s) 466, 1074, 1432, 1641, 2424
PspFI CCCAGC 1 cut(s) 947
PspGI CCWGG 5 cut(s) 466, 1074, 1432, 1641, 2424
PspN4I GGNNCC 9 cut(s) 706, 772, 929, 1073, 1632, 1647, 1970, 2109, 3125
PspOMI GGGCCC 2 cut(s) 927, 3123
PspPI GGNCC 9 cut(s) 927, 928, 1072, 1892, 1969, 2605, 2953, 3123, 3124
PspPPI RGGWCCY 2 cut(s) 1072, 1969
PsrI GAACNNNNNNTAC 2 cut(s) 2402, 2434
PstI CTGCAG 1 cut(s) 3502
PstNI CAGNNNCTG 5 cut(s) 1556, 1577, 1667, 2098, 2818
PsuI RGATCY 5 cut(s) 1618, 1630, 1645, 1936, 2095
PvuII CAGCTG 1 cut(s) 689
RsaI GTAC 6 cut(s) 258, 462, 886, 2351, 3022, 3372
RsaNI GTAC 6 cut(s) 257, 461, 885, 2350, 3021, 3371
RseI CAYNNNNRTG 4 cut(s) 635, 2196, 3267, 3305
SacI GAGCTC 4 cut(s) 22, 150, 171, 658
SapI GCTCTTC 1 cut(s) 155
Sau96I GGNCC 9 cut(s) 927, 928, 1072, 1892, 1969, 2605, 2953, 3123, 3124
ScrFI CCNGG 5 cut(s) 468, 1076, 1434, 1643, 2426
SduI GDGCHC 7 cut(s) 22, 150, 171, 658, 931, 3073, 3127
SexAI ACCWGGT 1 cut(s) 1074
SfaNI GCATC 9 cut(s) 430, 943, 1401, 1688, 1696, 2084, 2208, 2248, 2271
SfcI CTRYAG 2 cut(s) 318, 3498
SfuI TTCGAA 1 cut(s) 810
SinI GGWCC 4 cut(s) 1072, 1892, 1969, 2953
SmiMI CAYNNNNRTG 4 cut(s) 635, 2196, 3267, 3305
SmlI CTYRAG 3 cut(s) 232, 1741, 3219
SmoI CTYRAG 3 cut(s) 232, 1741, 3219
SphI GCATGC 1 cut(s) 3430
SsiI CCGC 9 cut(s) 51, 141, 196, 561, 973, 1415, 2261, 2638, 3430
SspI AATATT 2 cut(s) 589, 3439
SspMI CTAG 8 cut(s) 888, 1250, 2033, 2150, 2333, 2531, 3033, 3128
SstI GAGCTC 4 cut(s) 22, 150, 171, 658
StyD4I CCNGG 5 cut(s) 466, 1074, 1432, 1641, 2424
StyI CCWWGG 5 cut(s) 105, 1422, 1872, 2608, 3127
TaaI ACNGT 8 cut(s) 1288, 1558, 1565, 1653, 1693, 1777, 3234, 3256
TaiI ACGT 1 cut(s) 3376
TaqI TCGA 9 cut(s) 126, 165, 210, 219, 393, 810, 1349, 2239, 2650
TaqII GACCGA 1 cut(s) 1014
TatI WGTACW 4 cut(s) 256, 460, 884, 3020
TauI GCSGC 4 cut(s) 53, 143, 1417, 2641
TscAI CASTG 8 cut(s) 547, 900, 1780, 2436, 2857, 2967, 3259, 3507
TseFI GTSAC 5 cut(s) 1261, 1768, 2596, 3289, 3442
TseI GCWGC 6 cut(s) 737, 833, 956, 1529, 2284, 3497
Tsp45I GTSAC 5 cut(s) 1261, 1768, 2596, 3289, 3442
TspGWI ACGGA 1 cut(s) 1239
TspRI CASTG 8 cut(s) 547, 900, 1780, 2436, 2857, 2967, 3259, 3507
VpaK11BI GGWCC 4 cut(s) 1072, 1892, 1969, 2953
XagI CCTNNNNNAGG 3 cut(s) 1065, 1426, 3174
XapI RAATTY 9 cut(s) 500, 663, 673, 1338, 1912, 2777, 2911, 2926, 3139
XbaI TCTAGA 1 cut(s) 2032
XceI RCATGY 2 cut(s) 634, 3430
XmaJI CCTAGG 1 cut(s) 3127
XmiI GTMKAC 1 cut(s) 2482
XmnI GAANNNNTTC 1 cut(s) 3150
XspI CTAG 8 cut(s) 888, 1250, 2033, 2150, 2333, 2531, 3033, 3128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.