Rorug07G0276100
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
26386782 .. 26390828
4047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0276100.1

Sequence Viewer

Length: 1188 bp
ATGGCCTATGCAAGATTAGGCCAGTGGTTAAGTCTTCTGGTATGTTTACTGATATTGCTAAAAGCTGAAAGCCATCCTGTGGAACTCACTTTGGTCCAGAGTGCAGTTGCCAAAGGAGCTGTTTGTTTAGACGGGAGCCCACCGGCATACCACTTTGACAAGGGATTTGGTGCAGGGATTAACAATTGGTTGGTTCATATTGAGGGAGGAGGATGGTGTAAGGATGTTGAGAGTTGCGTTGAGCGAACGAAAAACTTCAGAGGTTCATCCAAAAAAATGGAAAAGACAATATCTTTTTCTGGGGTTCTTGGTAAAAAGCAAACTATGAATCCAGACTTCTATAACTGGAACAGAATCAAGGTTAGGTACTGTGATGGGTCATCATTCACCGGTGATGTGGAAGCAGTAGACCCAGCTACAAATCTTCACTTCAGAGGAGGAAGGGTTTTTCGTGCCATCATTGATGATCTATTAGCAAAGGGAATGATAAACGCCAAAAATGCTCTACTCTCTGGTTGTTCGGCTGGAGGATTGGCTTCTATTCTTCAATGTGATAACTTCCGTTCTCTCTTACCCGCCGGAACTAATGTGAAATGCCTTGCGGATGCTGGTTACTTCATCAATGGGAAGACTATTACTGGATCACAACAAATTGAAGCCTTTTATAGTCAAGTGGTTGCACTACATGGTTCAGCAAAGCATTTACCTGCATCCTGCACTTCAAGATTGAGACCAGGGTTGTGCTTCTTCCCACAAAATGTGATACCGGAACTCCAGACTCCTATTTTTTTGGTAAATGCTGCTTATGATTCGTGGCAGATAAAGAACATTTTGGCACCGAGTATTGCTGATCCTAAAGGCACATGGAAAAGCTGCAAGTCTGGTATAAAGAACTGCTCACCTGCGCAAATTCAAACCATGCAAGATTATAGGTTACAGTTCTTAAATGTACTCAATGGTGGTCTCAGCAACTCTCCATCTCATGGAGCATTCATAGACTCTTGCTATGCTCACTGCCAAATTGGAACTCAAGAGACATGGATGGCATCTGACTCCCCGGTTGTCAGTAAGACGACAATTGCAAAGGCCGTCGGAGACTGGTATTACAACCGAAGTCCATCAAAAAAGATCGATTGTCCTTACCCTTGCAATCCTACCTGCAAAAATAAAGAATTTGATTCAAACTAG

Protein Analysis

395

Amino Acids

43.05

Weight (kDa)

8.81

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAE PF03283 21 - 388 8.9e-176 Pectinacetylesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 910
Acc16I TGCGCA 1 cut(s) 906
Acc36I ACCTGC 3 cut(s) 715, 910, 1166
AccB1I GGYRCC 1 cut(s) 835
AccB7I CCANNNNNTGG 2 cut(s) 79, 983
AccI GTMKAC 1 cut(s) 408
AciI CCGC 2 cut(s) 576, 602
AclWI GGATC 2 cut(s) 649, 845
AcsI RAATTY 2 cut(s) 909, 1172
AcuI CTGAAG 2 cut(s) 241, 415
AfaI GTAC 2 cut(s) 368, 951
AfiI CCNNNNNNNGG 2 cut(s) 79, 983
AgeI ACCGGT 1 cut(s) 389
AgsI TTSAA 5 cut(s) 548, 656, 723, 914, 1182
AjnI CCWGG 1 cut(s) 733
AluBI AGCT 4 cut(s) 65, 119, 416, 873
AluI AGCT 4 cut(s) 65, 119, 416, 873
Alw26I GTCTC 4 cut(s) 724, 968, 1028, 1089
AlwI GGATC 2 cut(s) 649, 845
AoxI GGCC 3 cut(s) 3, 19, 1086
ApeKI GCWGC 2 cut(s) 800, 873
ApoI RAATTY 2 cut(s) 909, 1172
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
AsiGI ACCGGT 1 cut(s) 389
Asp700I GAANNNNTTC 1 cut(s) 254
AspLEI GCGC 1 cut(s) 907
AspS9I GGNCC 1 cut(s) 94
AsuC2I CCSGG 1 cut(s) 1058
AsuHPI GGTGA 3 cut(s) 379, 404, 891
AvaII GGWCC 1 cut(s) 94
BanI GGYRCC 1 cut(s) 835
BanII GRGCYC 1 cut(s) 140
BbsI GAAGAC 2 cut(s) 26, 635
BbvI GCAGC 2 cut(s) 787, 860
BccI CCATC 7 cut(s) 81, 207, 368, 464, 985, 1036, 1126
BceAI ACGGC 1 cut(s) 1073
BciT130I CCWGG 1 cut(s) 735
BcnI CCSGG 1 cut(s) 1058
BcoDI GTCTC 4 cut(s) 724, 968, 1028, 1089
BfaI CTAG 1 cut(s) 1186
BfuAI ACCTGC 3 cut(s) 715, 910, 1166
BisI GCNGC 2 cut(s) 801, 874
BlsI GCNGC 2 cut(s) 802, 875
Bme1390I CCNGG 2 cut(s) 735, 1058
Bme18I GGWCC 1 cut(s) 94
BmgT120I GGNCC 1 cut(s) 94
BmiI GGNNCC 2 cut(s) 137, 837
BmrFI CCNGG 2 cut(s) 735, 1058
BmsI GCATC 3 cut(s) 595, 719, 1055
BpiI GAAGAC 2 cut(s) 26, 635
BpmI CTGGAG 2 cut(s) 546, 758
BpuEI CTTGAG 1 cut(s) 1014
BpuMI CCSGG 1 cut(s) 1058
Bsa29I ATCGAT 1 cut(s) 1131
BsaI GGTCTC 2 cut(s) 724, 968
BsaJI CCNNGG 2 cut(s) 734, 1056
BsaWI WCCGGW 2 cut(s) 389, 766
BsaXI ACNNNNNCTCC 4 cut(s) 429, 459, 756, 786
Bsc4I CCNNNNNNNGG 2 cut(s) 79, 983
Bse118I RCCGGY 2 cut(s) 142, 389
Bse1I ACTGG 4 cut(s) 22, 350, 643, 1103
BseBI CCWGG 1 cut(s) 735
BseCI ATCGAT 1 cut(s) 1131
BseDI CCNNGG 2 cut(s) 734, 1056
BseGI GGATG 7 cut(s) 73, 218, 229, 266, 610, 710, 1047
BseLI CCNNNNNNNGG 2 cut(s) 79, 983
BseMII CTCAG 1 cut(s) 979
BseNI ACTGG 4 cut(s) 22, 350, 643, 1103
BseRI GAGGAG 2 cut(s) 222, 450
BseXI GCAGC 2 cut(s) 787, 860
BseYI CCCAGC 1 cut(s) 412
BsgI GTGCAG 3 cut(s) 123, 192, 700
BshFI GGCC 3 cut(s) 5, 21, 1088
BshNI GGYRCC 1 cut(s) 835
BshTI ACCGGT 1 cut(s) 389
BshVI ATCGAT 1 cut(s) 1131
BsiSI CCGG 5 cut(s) 143, 390, 579, 767, 1058
BslI CCNNNNNNNGG 2 cut(s) 79, 983
BsmAI GTCTC 4 cut(s) 724, 968, 1028, 1089
BsmI GAATGC 1 cut(s) 989
BsnI GGCC 3 cut(s) 5, 21, 1088
Bso31I GGTCTC 2 cut(s) 724, 968
Bsp1286I GDGCHC 1 cut(s) 140
Bsp143I GATC 4 cut(s) 466, 641, 850, 1128
BspACI CCGC 2 cut(s) 576, 602
BspANI GGCC 3 cut(s) 5, 21, 1088
BspCNI CTCAG 1 cut(s) 978
BspDI ATCGAT 1 cut(s) 1131
BspLI GGNNCC 2 cut(s) 137, 837
BspMI ACCTGC 3 cut(s) 715, 910, 1166
BspPI GGATC 2 cut(s) 649, 845
BspT107I GGYRCC 1 cut(s) 835
BspTNI GGTCTC 2 cut(s) 724, 968
BsrFI RCCGGY 2 cut(s) 142, 389
BsrI ACTGG 4 cut(s) 22, 350, 643, 1103
BssAI RCCGGY 2 cut(s) 142, 389
BssECI CCNNGG 2 cut(s) 734, 1056
BssMI GATC 4 cut(s) 466, 641, 850, 1128
Bst2UI CCWGG 1 cut(s) 735
Bst4CI ACNGT 2 cut(s) 371, 939
BstDEI CTNAG 1 cut(s) 965
BstF5I GGATG 7 cut(s) 73, 218, 229, 266, 610, 710, 1047
BstHHI GCGC 1 cut(s) 907
BstKTI GATC 4 cut(s) 469, 644, 853, 1131
BstMAI GTCTC 4 cut(s) 724, 968, 1028, 1089
BstMBI GATC 4 cut(s) 466, 641, 850, 1128
BstMWI GCNNNNNNNGC 2 cut(s) 116, 500
BstNI CCWGG 1 cut(s) 735
BstSCI CCNGG 2 cut(s) 733, 1056
BstV1I GCAGC 2 cut(s) 787, 860
BstV2I GAAGAC 2 cut(s) 26, 635
BstXI CCANNNNNNTGG 1 cut(s) 277
Bsu15I ATCGAT 1 cut(s) 1131
BsuRI GGCC 3 cut(s) 5, 21, 1088
BsuTUI ATCGAT 1 cut(s) 1131
BtsCI GGATG 7 cut(s) 73, 218, 229, 266, 610, 710, 1047
BtsI GCAGTG 1 cut(s) 1012
BtsIMutI CAGTG 2 cut(s) 29, 1012
BveI ACCTGC 3 cut(s) 715, 910, 1166
CfoI GCGC 1 cut(s) 907
Cfr10I RCCGGY 2 cut(s) 142, 389
Cfr13I GGNCC 1 cut(s) 94
ClaI ATCGAT 1 cut(s) 1131
Csp6I GTAC 2 cut(s) 367, 950
CspAI ACCGGT 1 cut(s) 389
CviAII CATG 5 cut(s) 686, 864, 919, 983, 1038
CviQI GTAC 2 cut(s) 367, 950
DdeI CTNAG 1 cut(s) 965
DpnI GATC 4 cut(s) 468, 643, 852, 1130
DpnII GATC 4 cut(s) 466, 641, 850, 1128
Eco24I GRGCYC 1 cut(s) 140
Eco31I GGTCTC 2 cut(s) 724, 968
Eco47I GGWCC 1 cut(s) 94
Eco57I CTGAAG 2 cut(s) 241, 415
EcoRII CCWGG 1 cut(s) 733
EcoT38I GRGCYC 1 cut(s) 140
FaeI CATG 5 cut(s) 689, 867, 922, 986, 1041
FatI CATG 5 cut(s) 685, 863, 918, 982, 1037
FauI CCCGC 1 cut(s) 583
FblI GTMKAC 1 cut(s) 408
Fnu4HI GCNGC 2 cut(s) 801, 874
FokI GGATG 7 cut(s) 60, 225, 236, 253, 617, 697, 1054
FriOI GRGCYC 1 cut(s) 140
Fsp4HI GCNGC 2 cut(s) 801, 874
FspBI CTAG 1 cut(s) 1186
FspI TGCGCA 1 cut(s) 906
GlaI GCGC 1 cut(s) 906
GluI GCNGC 2 cut(s) 801, 874
GsaI CCCAGC 1 cut(s) 416
GsuI CTGGAG 2 cut(s) 546, 758
HaeIII GGCC 3 cut(s) 5, 21, 1088
HapII CCGG 5 cut(s) 143, 390, 579, 767, 1058
HhaI GCGC 1 cut(s) 907
Hin1II CATG 5 cut(s) 689, 867, 922, 986, 1041
Hin6I GCGC 1 cut(s) 905
HinP1I GCGC 1 cut(s) 905
HinfI GANTC 7 cut(s) 328, 354, 778, 809, 998, 1052, 1178
HpaII CCGG 5 cut(s) 143, 390, 579, 767, 1058
HphI GGTGA 3 cut(s) 379, 404, 891
Hpy166II GTNNAC 2 cut(s) 47, 409
Hpy188I TCNGA 4 cut(s) 260, 434, 1051, 1094
Hpy188III TCNNGA 5 cut(s) 97, 332, 723, 775, 1031
Hpy8I GTNNAC 2 cut(s) 47, 409
Hpy99I CGWCG 1 cut(s) 1094
HpyAV CCTTC 1 cut(s) 435
HpyCH4III ACNGT 2 cut(s) 371, 939
HpyF10VI GCNNNNNNNGC 2 cut(s) 116, 500
HpyF3I CTNAG 1 cut(s) 965
Hsp92II CATG 5 cut(s) 689, 867, 922, 986, 1041
HspAI GCGC 1 cut(s) 905
Kzo9I GATC 4 cut(s) 466, 641, 850, 1128
LmnI GCTCC 3 cut(s) 116, 135, 986
Lsp1109I GCAGC 2 cut(s) 787, 860
LweI GCATC 3 cut(s) 595, 719, 1055
MaeI CTAG 1 cut(s) 1186
MaeIII GTNAC 2 cut(s) 611, 933
MalI GATC 4 cut(s) 468, 643, 852, 1130
MboI GATC 4 cut(s) 466, 641, 850, 1128
MboII GAAGA 5 cut(s) 26, 416, 536, 640, 739
MfeI CAATTG 2 cut(s) 184, 1077
MhlI GDGCHC 1 cut(s) 140
MluCI AATT 6 cut(s) 184, 651, 909, 1020, 1077, 1172
MlyI GAGTC 3 cut(s) 772, 992, 1046
MmeI TCCRAC 1 cut(s) 1072
MnlI CCTC 7 cut(s) 196, 200, 203, 254, 428, 431, 521
MroXI GAANNNNTTC 1 cut(s) 254
MseI TTAA 3 cut(s) 29, 180, 944
MspI CCGG 5 cut(s) 143, 390, 579, 767, 1058
MspR9I CCNGG 2 cut(s) 735, 1058
MunI CAATTG 2 cut(s) 184, 1077
Mva1269I GAATGC 1 cut(s) 989
MvaI CCWGG 1 cut(s) 735
MwoI GCNNNNNNNGC 2 cut(s) 116, 500
NciI CCSGG 1 cut(s) 1058
NdeII GATC 4 cut(s) 466, 641, 850, 1128
NlaIII CATG 5 cut(s) 689, 867, 922, 986, 1041
NlaIV GGNNCC 2 cut(s) 137, 837
NsbI TGCGCA 1 cut(s) 906
PaqCI CACCTGC 1 cut(s) 910
PctI GAATGC 1 cut(s) 989
PdmI GAANNNNTTC 1 cut(s) 254
PfeI GAWTC 4 cut(s) 328, 354, 809, 1178
PflMI CCANNNNNTGG 2 cut(s) 79, 983
PinAI ACCGGT 1 cut(s) 389
PkrI GCNGC 2 cut(s) 802, 875
PleI GAGTC 3 cut(s) 772, 992, 1046
PpsI GAGTC 3 cut(s) 772, 992, 1046
Psp6I CCWGG 1 cut(s) 733
PspFI CCCAGC 1 cut(s) 412
PspGI CCWGG 1 cut(s) 733
PspN4I GGNNCC 2 cut(s) 137, 837
PspPI GGNCC 1 cut(s) 94
RsaI GTAC 2 cut(s) 368, 951
RsaNI GTAC 2 cut(s) 367, 950
SaqAI TTAA 3 cut(s) 29, 180, 944
SatI GCNGC 2 cut(s) 801, 874
Sau3AI GATC 4 cut(s) 466, 641, 850, 1128
Sau96I GGNCC 1 cut(s) 94
SchI GAGTC 3 cut(s) 772, 992, 1046
ScrFI CCNGG 2 cut(s) 735, 1058
SduI GDGCHC 1 cut(s) 140
SfaNI GCATC 3 cut(s) 595, 719, 1055
SgrAI CRCCGGYG 1 cut(s) 389
SinI GGWCC 1 cut(s) 94
SmlI CTYRAG 1 cut(s) 1029
SmoI CTYRAG 1 cut(s) 1029
Sse9I AATT 6 cut(s) 184, 651, 909, 1020, 1077, 1172
SsiI CCGC 2 cut(s) 576, 602
SspMI CTAG 1 cut(s) 1186
StyD4I CCNGG 2 cut(s) 733, 1056
TaaI ACNGT 2 cut(s) 371, 939
TaqI TCGA 1 cut(s) 1131
TasI AATT 6 cut(s) 184, 651, 909, 1020, 1077, 1172
TatI WGTACW 1 cut(s) 949
TfiI GAWTC 4 cut(s) 328, 354, 809, 1178
Tru1I TTAA 3 cut(s) 29, 180, 944
Tru9I TTAA 3 cut(s) 29, 180, 944
TscAI CASTG 2 cut(s) 29, 1019
TseI GCWGC 2 cut(s) 800, 873
TspDTI ATGAA 5 cut(s) 185, 255, 341, 607, 982
TspGWI ACGGA 1 cut(s) 551
TspRI CASTG 2 cut(s) 29, 1019
Van91I CCANNNNNTGG 2 cut(s) 79, 983
VpaK11BI GGWCC 1 cut(s) 94
XapI RAATTY 2 cut(s) 909, 1172
XmiI GTMKAC 1 cut(s) 408
XmnI GAANNNNTTC 1 cut(s) 254
XspI CTAG 1 cut(s) 1186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.