RLG00000027100
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
8426698 .. 8430323
3626 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027100

Sequence Viewer

Length: 3027 bp
ATGGAGCTTCATATGCTCAACTTCTCTGCATTTTATTCAACCTACCTTCATGTCATGACCACCCTTTTCCTTCTCACCAACCTTTTCCAACCTGCCATCTTTGCAAATGCATTGAGCAATGAAACCGATCACTTGGCTTTGCTGAAATTCAAAGATTGCACAGTCACCGATCCAGATGGGCTGTTGAACTCATGGAATGACTCCGTTCACTTCTGCAAATGGCAAGGAATTATATGCGGCAGACGGCATCAAAGAGTAACAGCCTTGAACCTACAAGGCTATGATTTGCATGGAACCATATCACCATACATTGGCAACCTCTCCTTTCTTAGGTTCATCAACCTTCGAAACAACAGCTTCTCTGGCAACATTCCGCAACAAGTTGAACATTTATTCCGACTGCGACATCTCAATCTCAGTAGCAACATATTGGAGGGGGGAATTCCAGTCAACCTGACTTTGTGTGCGGAACTGAGCATCTTAACTATTGTAGAAAACCGCCTTACCGACAAAATTCCTTCGGAGATTGGGTCATTGAGGAAGCTTGTGCATCTCAATCTACAGAAAAACAATCTGACGGGAGGCATCCCACCTTCCTTGGGAAATCTTTCATCAATCACACAGCTGTCCTTCGCATATAACAATTTGGGGGGAACAATTCCAGAGGAGATAGGCCGATTGAGAAGCATATCATTTTTCGCAATTGGTTCCAATAATCTCTCCGGTATGATCCCTCCCTCCCTTTTTAACATATCATCTATGAATGTCATCTCAATTACGGGTAATAAGTTTAAGGGCAGCATTCCACCTGGTATAGGCCTAAACATGCCTAATCTCCGACAACTGTTGCTTGCTGAAAATGAATTCTCTAGACAAATCCCAGCTTCACTTTCCAATGCTTCTCAGCTTCAGAAGCTTGATTTTGAGGAAAATAATTTTGTTGGCCAAGTTCCCCCAAGTTTTGGAAATTTTCCTAATCTCCAGGTGCTCAGCTTCTATAGCAATAATGTAGGAAGTAATTCATCAAATGATTTGAGATTTATAACATTCTTGACAAATTGCACCAATCTGGAAATTGTTGATCTGAGTTATAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAATTTCTCAACCCAACTGACTGACCTCTACCTTGGGGGCAATCAAATATCGGGAACGATTCCTGAAACATTAGGAAATCTGAACAATTTAATACTCTTGACTGTGGAAGAAAACTTGTTCACAGGTATCATTCCAGCTTCTTTTGGGAATTTACAAAAGTTGCAAAGATTACGTTTAGATTCTAATAGATTATCAGGTTGGATCCCATCTTCCCTAGGAAACCTCACCCAATTGTTTGAACTCGGTTTGTTTGAAAATGAATTAGAAGGAAGCATTCCTCCAAGTATTGTGGGTAAGCTGAAGAATATCAATATACTGGACATCTCTTATAATAATTTGACTGGAGGAATTCCAGAAATTATTGGAGGCTGTCTGAGCCTTGAATTTCTTTACCTACAAGGGAACCACTTTCAAGGAATCCTTCCTTCTTCTTTGGCTGCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGAAACAACCTGTCAGGACATATTCCAAAAGACCTACAGAGGCTTCCATTCTTAATTCATTTGAACCTTTCGTTCAATAATCTTCAAGGTGAGGTACTGAAAGAAAGAGTTTTTCGAAACACAAGTACAATATCATTGGATGGAAATAGCAAACTTTGTGGTGGTGTTTCGGAATTGCAGCTACCAACATGCCCCATCAAAGTACCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACAATTTCTTTAGTCGCTGGATGCTCTCTTCTGTTTGCAGCGATCATAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAATACGCTGTTATCTGCAGTGTCATCAATCAAATTCCTTCCAAAGGTTTCATACCAGACACTTCATCAAGCTACTGGCGGATTCTCTCCGAGCAATAAAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTATTGATCAAGAAGAAAACAAACTTGTTGCCATAAAGGTGCTCAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTTGTGGCAGAATGCAATGCACTCAGAAATATCCGGCACAAAAACCTTGTGAAAATCTTAACATGTTGCTCTAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTATATGTCAAATGGAAGTCTAGAGGAGTGGCTGCACAAAGAGAACCAATCAAGGAGTCTGAACCTTTTTCAAAGACTGAATATTGCTGTTGATGTGTCTTCTGCATTGTGTTATCTTCATGATCATTGTGAACCACAAGTTATTCACCGTGACATGAAGCCAAGCAACGTTCTTCTTGACGATGACATGATTGCTTGTGTTGGTGATTTTGGGTTAGCAAGATTCATCCCACCGACCACAGACTCCTTTGACAATCAAAGTAGCACAGTAGGGATAAAGGGAACCATTGGTTATGCTGCTCCAGAGTATGCAATTGGTGTTGAGCCATCAATACAAGGGGATGTATACAGTTACGGAATCCTTGTTTTGCAATTGTTCACAAGAAGAAGACCCACTGATGAAATGTTTGTAGACGGTTGCGATATCCATACTTTTGTTAAGAAGTCCATACAAGGAAGACTTATGCAAATTGTGGATCCTACTCTTATTGCCACTCTAGAAGAGACTGCAACTTCAACAACAAACAATGAAGTGACCAACATCCATGGTTACAACAATGAAATCGAAACTGATGAAGGCAACATTGACAATGAGAATTTAAGCACAATGAACACTTACGTGTGGAAGTGCATACTTCCAACCCTCAAGATTGGACTTGCATGCTTGGAAGAATCACCAAGGAATAGGATGTCTATGGAGGAGGTCCACAGGGAACTACACCATATAAAAAATGCTTACACTAGTGTTGACATCCGTCAAGAGAGGCCAAGAAGAAGCTAA

Protein Analysis

1009

Amino Acids

111.85

Weight (kDa)

6.79

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 4.2e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 102 - 334 4.1e-15 Leucine-rich repeat region
LRR_14 PF23598 318 - 580 4.2e-16 Leucine-rich repeat region
LRR_8 PF13855 381 - 440 4.9e-09 Leucine rich repeat
LRR_8 PF13855 408 - 464 3.6e-06 Leucine rich repeat
LRR_8 PF13855 503 - 561 2e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 671 - 898 9.4e-40 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 671 - 884 7.7e-40 Protein kinase domain
APH PF01636 753 - 830 4.6e-06 Phosphotransferase enzyme family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1043, 1092, 1458
Acc36I ACCTGC 1 cut(s) 100
AccB7I CCANNNNNTGG 2 cut(s) 311, 962
AccI GTMKAC 3 cut(s) 2046, 2592, 2658
AciI CCGC 6 cut(s) 237, 374, 467, 499, 1998, 2031
AclI AACGTT 1 cut(s) 2415
AclWI GGATC 7 cut(s) 164, 724, 1324, 1337, 2032, 2717, 2730
AcoI YGGCCR 1 cut(s) 943
AcuI CTGAAG 3 cut(s) 893, 1448, 1565
AfaI GTAC 3 cut(s) 1695, 1726, 1803
AfiI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 962, 1963
AflIII ACRYGT 2 cut(s) 2192, 2865
AhlI ACTAGT 1 cut(s) 2987
AjnI CCWGG 2 cut(s) 808, 981
AleI CACNNNNGTG 1 cut(s) 2864
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
Alw21I GWGCWC 2 cut(s) 990, 2100
Alw26I GTCTC 1 cut(s) 2744
AlwI GGATC 7 cut(s) 164, 724, 1324, 1337, 2032, 2717, 2730
AoxI GGCC 4 cut(s) 673, 817, 943, 3011
ApeKI GCWGC 6 cut(s) 798, 1565, 1777, 1880, 2278, 2543
Asp700I GAANNNNTTC 2 cut(s) 607, 1018
AspA2I CCTAGG 1 cut(s) 1342
AspS9I GGNCC 1 cut(s) 2950
AsuHPI GGTGA 8 cut(s) 67, 157, 294, 1345, 1700, 2384, 2462, 2913
AsuII TTCGAA 2 cut(s) 346, 1714
AvaII GGWCC 1 cut(s) 2950
AvrII CCTAGG 1 cut(s) 1342
BalI TGGCCA 1 cut(s) 945
BamHI GGATCC 2 cut(s) 1329, 2722
BbsI GAAGAC 4 cut(s) 1571, 2337, 2641, 2710
Bbv12I GWGCWC 2 cut(s) 990, 2100
BbvI GCAGC 6 cut(s) 810, 1552, 1789, 1892, 2265, 2530
BccI CCATC 6 cut(s) 104, 170, 1342, 1733, 1802, 2581
BceAI ACGGC 1 cut(s) 260
BciT130I CCWGG 2 cut(s) 810, 983
BclI TGATCA 2 cut(s) 2062, 2368
BcoDI GTCTC 1 cut(s) 2744
BcuI ACTAGT 1 cut(s) 2987
BfaI CTAG 8 cut(s) 870, 1343, 1589, 2202, 2237, 2267, 2744, 2988
BfmI CTRYAG 5 cut(s) 560, 997, 1122, 1634, 1935
BfuAI ACCTGC 1 cut(s) 100
BglII AGATCT 1 cut(s) 1591
BisI GCNGC 7 cut(s) 238, 799, 1566, 1778, 1881, 2279, 2544
BlnI CCTAGG 1 cut(s) 1342
BlpI GCTNAGC 1 cut(s) 989
BlsI GCNGC 7 cut(s) 239, 800, 1567, 1779, 1882, 2280, 2545
Bme1390I CCNGG 2 cut(s) 810, 983
Bme18I GGWCC 1 cut(s) 2950
BmgT120I GGNCC 1 cut(s) 2950
BmiI GGNNCC 6 cut(s) 295, 709, 1331, 1532, 2530, 2724
BmrFI CCNGG 2 cut(s) 810, 983
BmsI GCATC 5 cut(s) 256, 486, 559, 594, 1853
BoxI GACNNNNGTC 1 cut(s) 3000
BpiI GAAGAC 4 cut(s) 1571, 2337, 2641, 2710
BplI GAGNNNNNCTC 2 cut(s) 1897, 1929
BpmI CTGGAG 3 cut(s) 965, 1491, 2532
Bpu1102I GCTNAGC 1 cut(s) 989
Bpu14I TTCGAA 2 cut(s) 346, 1714
BpuEI CTTGAG 1 cut(s) 2876
BsaAI YACGTR 1 cut(s) 2866
BsaJI CCNNGG 5 cut(s) 597, 1159, 1342, 2791, 2924
BsaWI WCCGGW 1 cut(s) 722
BsaXI ACNNNNNCTCC 2 cut(s) 515, 545
Bsc4I CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 962, 1963
Bse1I ACTGG 4 cut(s) 446, 1449, 1474, 1999
Bse3DI GCAATG 2 cut(s) 124, 2152
BseBI CCWGG 2 cut(s) 810, 983
BseDI CCNNGG 5 cut(s) 597, 1159, 1342, 2791, 2924
BseGI GGATG 8 cut(s) 585, 1744, 1868, 2472, 2593, 2787, 2940, 2997
BseLI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 962, 1963
BseMI GCAATG 2 cut(s) 124, 2152
BseMII CTCAG 7 cut(s) 430, 464, 917, 1003, 1076, 1493, 2167
BseNI ACTGG 4 cut(s) 446, 1449, 1474, 1999
BseRI GAGGAG 4 cut(s) 680, 1918, 2285, 2960
BseXI GCAGC 6 cut(s) 810, 1552, 1789, 1892, 2265, 2530
BseYI CCCAGC 1 cut(s) 880
BsgI GTGCAG 1 cut(s) 2264
BshFI GGCC 4 cut(s) 675, 819, 945, 3013
BsiHKAI GWGCWC 2 cut(s) 990, 2100
BsiSI CCGG 2 cut(s) 723, 2164
BslI CCNNNNNNNGG 6 cut(s) 311, 330, 599, 815, 962, 1963
BsmAI GTCTC 1 cut(s) 2744
BsmI GAATGC 3 cut(s) 801, 1401, 2147
BsnI GGCC 4 cut(s) 675, 819, 945, 3013
Bsp119I TTCGAA 2 cut(s) 346, 1714
Bsp1286I GDGCHC 2 cut(s) 990, 2100
Bsp1720I GCTNAGC 1 cut(s) 989
Bsp19I CCATGG 1 cut(s) 2791
BspACI CCGC 6 cut(s) 237, 374, 467, 499, 1998, 2031
BspANI GGCC 4 cut(s) 675, 819, 945, 3013
BspCNI CTCAG 7 cut(s) 429, 465, 916, 1002, 1077, 1494, 2166
BspHI TCATGA 2 cut(s) 54, 2365
BspLI GGNNCC 6 cut(s) 295, 709, 1331, 1532, 2530, 2724
BspMAI CTGCAG 1 cut(s) 1939
BspMI ACCTGC 1 cut(s) 100
BspPI GGATC 7 cut(s) 164, 724, 1324, 1337, 2032, 2717, 2730
BspT104I TTCGAA 2 cut(s) 346, 1714
BsrDI GCAATG 2 cut(s) 124, 2152
BsrI ACTGG 4 cut(s) 446, 1449, 1474, 1999
BssECI CCNNGG 5 cut(s) 597, 1159, 1342, 2791, 2924
BssNAI GTATAC 2 cut(s) 2047, 2593
BssT1I CCWWGG 5 cut(s) 597, 1159, 1342, 2791, 2924
Bst1107I GTATAC 2 cut(s) 2047, 2593
Bst2UI CCWGG 2 cut(s) 810, 983
Bst4CI ACNGT 7 cut(s) 163, 846, 1231, 2396, 2515, 2597, 2663
Bst6I CTCTTC 2 cut(s) 1875, 2742
BstBAI YACGTR 1 cut(s) 2866
BstBI TTCGAA 2 cut(s) 346, 1714
BstC8I GCNNGC 2 cut(s) 852, 2908
BstDEI CTNAG 8 cut(s) 329, 416, 473, 903, 989, 1085, 1502, 2153
BstDSI CCRYGG 1 cut(s) 2791
BstENI CCTNNNNNAGG 3 cut(s) 328, 813, 1961
BstF5I GGATG 8 cut(s) 585, 1744, 1868, 2472, 2593, 2787, 2940, 2997
BstMAI GTCTC 1 cut(s) 2744
BstMWI GCNNNNNNNGC 8 cut(s) 13, 101, 363, 913, 999, 1503, 1889, 2037
BstNI CCWGG 2 cut(s) 810, 983
BstNSI RCATGY 4 cut(s) 829, 1791, 2196, 2910
BstPAI GACNNNNGTC 1 cut(s) 3000
BstSCI CCNGG 2 cut(s) 808, 981
BstSFI CTRYAG 5 cut(s) 560, 997, 1122, 1634, 1935
BstV1I GCAGC 6 cut(s) 810, 1552, 1789, 1892, 2265, 2530
BstV2I GAAGAC 4 cut(s) 1571, 2337, 2641, 2710
BstX2I RGATCY 3 cut(s) 1329, 1591, 2722
BstYI RGATCY 3 cut(s) 1329, 1591, 2722
BstZ17I GTATAC 2 cut(s) 2047, 2593
BsuRI GGCC 4 cut(s) 675, 819, 945, 3013
BtgI CCRYGG 1 cut(s) 2791
BtsCI GGATG 8 cut(s) 585, 1744, 1868, 2472, 2593, 2787, 2940, 2997
BtsI GCAGTG 1 cut(s) 1944
BtsIMutI CAGTG 2 cut(s) 1944, 2640
BveI ACCTGC 1 cut(s) 100
Cac8I GCNNGC 2 cut(s) 852, 2908
CciI TCATGA 2 cut(s) 54, 2365
Cfr13I GGNCC 1 cut(s) 2950
CsiI ACCWGGT 1 cut(s) 808
Csp6I GTAC 3 cut(s) 1694, 1725, 1802
CspCI CAANNNNNGTGG 6 cut(s) 579, 614, 1398, 1433, 1738, 1773
CviQI GTAC 3 cut(s) 1694, 1725, 1802
DdeI CTNAG 8 cut(s) 329, 416, 473, 903, 989, 1085, 1502, 2153
EaeI YGGCCR 1 cut(s) 943
Eam1104I CTCTTC 2 cut(s) 1875, 2742
EarI CTCTTC 2 cut(s) 1875, 2742
EciI GGCGGA 1 cut(s) 2013
Eco130I CCWWGG 5 cut(s) 597, 1159, 1342, 2791, 2924
Eco147I AGGCCT 1 cut(s) 819
Eco32I GATATC 1 cut(s) 2671
Eco47I GGWCC 1 cut(s) 2950
Eco57I CTGAAG 3 cut(s) 893, 1448, 1565
EcoNI CCTNNNNNAGG 3 cut(s) 328, 813, 1961
EcoRI GAATTC 3 cut(s) 441, 863, 1476
EcoRII CCWGG 2 cut(s) 808, 981
EcoRV GATATC 1 cut(s) 2671
EcoT14I CCWWGG 5 cut(s) 597, 1159, 1342, 2791, 2924
EcoT22I ATGCAT 1 cut(s) 112
ErhI CCWWGG 5 cut(s) 597, 1159, 1342, 2791, 2924
FalI AAGNNNNNCTT 4 cut(s) 1533, 1565, 2691, 2723
FauNDI CATATG 1 cut(s) 12
FbaI TGATCA 2 cut(s) 2062, 2368
FblI GTMKAC 3 cut(s) 2046, 2592, 2658
Fnu4HI GCNGC 7 cut(s) 238, 799, 1566, 1778, 1881, 2279, 2544
FokI GGATG 8 cut(s) 572, 1751, 1875, 2459, 2600, 2774, 2947, 2984
Fsp4HI GCNGC 7 cut(s) 238, 799, 1566, 1778, 1881, 2279, 2544
FspBI CTAG 8 cut(s) 870, 1343, 1589, 2202, 2237, 2267, 2744, 2988
GluI GCNGC 7 cut(s) 238, 799, 1566, 1778, 1881, 2279, 2544
GsaI CCCAGC 1 cut(s) 884
GsuI CTGGAG 3 cut(s) 965, 1491, 2532
HaeIII GGCC 4 cut(s) 675, 819, 945, 3013
HapII CCGG 2 cut(s) 723, 2164
HincII GTYRAC 2 cut(s) 451, 2995
HindII GTYRAC 2 cut(s) 451, 2995
HindIII AAGCTT 2 cut(s) 542, 914
HpaII CCGG 2 cut(s) 723, 2164
HphI GGTGA 8 cut(s) 67, 157, 294, 1345, 1700, 2384, 2462, 2913
HpyCH4III ACNGT 7 cut(s) 163, 846, 1231, 2396, 2515, 2597, 2663
HpyCH4IV ACGT 3 cut(s) 1300, 2415, 2865
HpyF10VI GCNNNNNNNGC 8 cut(s) 13, 101, 363, 913, 999, 1503, 1889, 2037
HpyF3I CTNAG 8 cut(s) 329, 416, 473, 903, 989, 1085, 1502, 2153
HpySE526I ACGT 3 cut(s) 1300, 2415, 2865
Ksp22I TGATCA 2 cut(s) 2062, 2368
LmnI GCTCC 3 cut(s) 4, 2117, 2551
Lsp1109I GCAGC 6 cut(s) 810, 1552, 1789, 1892, 2265, 2530
LweI GCATC 5 cut(s) 256, 486, 559, 594, 1853
MabI ACCWGGT 1 cut(s) 808
MaeI CTAG 8 cut(s) 870, 1343, 1589, 2202, 2237, 2267, 2744, 2988
MaeII ACGT 3 cut(s) 1300, 2415, 2865
MaeIII GTNAC 6 cut(s) 163, 256, 2396, 2597, 2779, 2795
MfeI CAATTG 4 cut(s) 702, 1358, 2559, 2618
MflI RGATCY 3 cut(s) 1329, 1591, 2722
MhlI GDGCHC 2 cut(s) 990, 2100
MlsI TGGCCA 1 cut(s) 945
MluNI TGGCCA 1 cut(s) 945
MlyI GAGTC 3 cut(s) 194, 2311, 2483
MmeI TCCRAC 5 cut(s) 112, 421, 862, 1307, 2909
Mox20I TGGCCA 1 cut(s) 945
Mph1103I ATGCAT 1 cut(s) 112
MroXI GAANNNNTTC 2 cut(s) 607, 1018
MscI TGGCCA 1 cut(s) 945
MseI TTAA 8 cut(s) 482, 747, 792, 1217, 1652, 2189, 2685, 2846
MslI CAYNNNNRTG 2 cut(s) 2093, 2864
Msp20I TGGCCA 1 cut(s) 945
MspA1I CMGCKG 1 cut(s) 625
MspI CCGG 2 cut(s) 723, 2164
MspR9I CCNGG 2 cut(s) 810, 983
MunI CAATTG 4 cut(s) 702, 1358, 2559, 2618
Mva1269I GAATGC 3 cut(s) 801, 1401, 2147
MvaI CCWGG 2 cut(s) 810, 983
MwoI GCNNNNNNNGC 8 cut(s) 13, 101, 363, 913, 999, 1503, 1889, 2037
NcoI CCATGG 1 cut(s) 2791
NdeI CATATG 1 cut(s) 12
NlaIV GGNNCC 6 cut(s) 295, 709, 1331, 1532, 2530, 2724
NmuCI GTSAC 3 cut(s) 163, 2396, 2779
NsiI ATGCAT 1 cut(s) 112
NspI RCATGY 4 cut(s) 829, 1791, 2196, 2910
NspV TTCGAA 2 cut(s) 346, 1714
OliI CACNNNNGTG 1 cut(s) 2864
PaeI GCATGC 1 cut(s) 2910
PagI TCATGA 2 cut(s) 54, 2365
PceI AGGCCT 1 cut(s) 819
PciI ACATGT 1 cut(s) 2192
PctI GAATGC 3 cut(s) 801, 1401, 2147
PdmI GAANNNNTTC 2 cut(s) 607, 1018
PfeI GAWTC 7 cut(s) 1186, 1307, 1545, 2001, 2469, 2604, 2918
PflMI CCANNNNNTGG 2 cut(s) 311, 962
PkrI GCNGC 7 cut(s) 239, 800, 1567, 1779, 1882, 2280, 2545
PleI GAGTC 3 cut(s) 194, 2310, 2483
PpsI GAGTC 3 cut(s) 194, 2310, 2483
Ppu21I YACGTR 1 cut(s) 2866
PscI ACATGT 1 cut(s) 2192
PshAI GACNNNNGTC 1 cut(s) 3000
PsiI TTATAA 3 cut(s) 1043, 1092, 1458
Psp1406I AACGTT 1 cut(s) 2415
Psp6I CCWGG 2 cut(s) 808, 981
PspFI CCCAGC 1 cut(s) 880
PspGI CCWGG 2 cut(s) 808, 981
PspN4I GGNNCC 6 cut(s) 295, 709, 1331, 1532, 2530, 2724
PspPI GGNCC 1 cut(s) 2950
PstI CTGCAG 1 cut(s) 1939
PsuI RGATCY 3 cut(s) 1329, 1591, 2722
PvuII CAGCTG 1 cut(s) 625
RsaI GTAC 3 cut(s) 1695, 1726, 1803
RsaNI GTAC 3 cut(s) 1694, 1725, 1802
RseI CAYNNNNRTG 2 cut(s) 2093, 2864
SaqAI TTAA 8 cut(s) 482, 747, 792, 1217, 1652, 2189, 2685, 2846
SatI GCNGC 7 cut(s) 238, 799, 1566, 1778, 1881, 2279, 2544
Sau96I GGNCC 1 cut(s) 2950
SchI GAGTC 3 cut(s) 194, 2311, 2483
ScrFI CCNGG 2 cut(s) 810, 983
SduI GDGCHC 2 cut(s) 990, 2100
SexAI ACCWGGT 1 cut(s) 808
SfaNI GCATC 5 cut(s) 256, 486, 559, 594, 1853
SfcI CTRYAG 5 cut(s) 560, 997, 1122, 1634, 1935
SfuI TTCGAA 2 cut(s) 346, 1714
SinI GGWCC 1 cut(s) 2950
SmiMI CAYNNNNRTG 2 cut(s) 2093, 2864
SmlI CTYRAG 1 cut(s) 2891
SmoI CTYRAG 1 cut(s) 2891
SpeI ACTAGT 1 cut(s) 2987
SphI GCATGC 1 cut(s) 2910
SseBI AGGCCT 1 cut(s) 819
SsiI CCGC 6 cut(s) 237, 374, 467, 499, 1998, 2031
SspI AATATT 1 cut(s) 2329
SspMI CTAG 8 cut(s) 870, 1343, 1589, 2202, 2237, 2267, 2744, 2988
StuI AGGCCT 1 cut(s) 819
StyD4I CCNGG 2 cut(s) 808, 981
StyI CCWWGG 5 cut(s) 597, 1159, 1342, 2791, 2924
TaaI ACNGT 7 cut(s) 163, 846, 1231, 2396, 2515, 2597, 2663
TaiI ACGT 3 cut(s) 1303, 2418, 2868
TaqI TCGA 3 cut(s) 346, 1714, 2811
TatI WGTACW 1 cut(s) 1724
TauI GCSGC 1 cut(s) 240
TfiI GAWTC 7 cut(s) 1186, 1307, 1545, 2001, 2469, 2604, 2918
Tru1I TTAA 8 cut(s) 482, 747, 792, 1217, 1652, 2189, 2685, 2846
Tru9I TTAA 8 cut(s) 482, 747, 792, 1217, 1652, 2189, 2685, 2846
TscAI CASTG 2 cut(s) 1944, 2647
TseFI GTSAC 3 cut(s) 163, 2396, 2779
TseI GCWGC 6 cut(s) 798, 1565, 1777, 1880, 2278, 2543
Tsp45I GTSAC 3 cut(s) 163, 2396, 2779
TspGWI ACGGA 3 cut(s) 193, 2616, 2990
TspRI CASTG 2 cut(s) 1944, 2647
Van91I CCANNNNNTGG 2 cut(s) 311, 962
VpaK11BI GGWCC 1 cut(s) 2950
XagI CCTNNNNNAGG 3 cut(s) 328, 813, 1961
XbaI TCTAGA 4 cut(s) 869, 1588, 2266, 2743
XceI RCATGY 4 cut(s) 829, 1791, 2196, 2910
XcmI CCANNNNNNNNNTGG 1 cut(s) 2131
XmaJI CCTAGG 1 cut(s) 1342
XmiI GTMKAC 3 cut(s) 2046, 2592, 2658
XmnI GAANNNNTTC 2 cut(s) 607, 1018
XspI CTAG 8 cut(s) 870, 1343, 1589, 2202, 2237, 2267, 2744, 2988
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.