FvH4_4g31390
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
30555828 .. 30558898
3071 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g31390.t1

Sequence Viewer

Length: 1497 bp
ATGGGACAACTGAGAAACCTATGGTTTTTTGGTATTAATTTTGGTAATCTCTCTGGTATGTTGCCACCCTCCATTTTTAACATGTCATCTATGCAAGTCTTTTCATTTGTGGGTAATAAGTTTGAGGGTATTGTTCCACTTCCACCCAGTATAGACCGAAACATGCCTCATCTCCACACAATGTTCCTCGGCGAAAATGAATTCTCTGGACAAATCCCGGCTTCTTTTGCCAATGCTTCTCAGCATCGATGGTTTGATGTTTCCAGAAATAATTACGTTGGGCAAGTTCCCACAAGTTTTGGAGTTTTACCTAATCTCCAGTGGCTCAATTTAGAGGGGAATAATCTAGGAAGTAATTCTTCTAATGATTTGGAATGTATAACATTCCTCACAAATTGCAGTAATTTGGAACTGCTTTCTCTGGCTGTTAATAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAATTTCTCAACCAACCTGACTCGACTCTACCTTGGGGGCAATCAAATAGTGGGAACGATTCCTGAAACATTAGGAAATCTCAACAGTTTGATATTCTTGGGCCTCGATGACAACTTGTTCACGAGTATCATTCCATCTTCTTTTGGGAAGTTACAAAATCTGCAATTTTTAGCTTTATCTACCAATAGATTATCAGGTTGGATCCCATCTTCCTTAGGAAACCTCACCCATTTGTTTCGACTCCAGTTATACGCAAATGAATTAGAAGGAATCATTCCTCCAGATATTGGTAATTGTCAAAGTCTGCAGTTAATTGATCTATCACACAATAATCTTAGTGGAGATATACCATCCCAGGTCATTGGCATGTCCTCCTTATCTGACTTACTCAACTTATCGCAAAACTCGCTAACTGGCAGCCTGCTTGTGGAAGTGGGTCAGTTGAAGAATATCAGGACACTTGACATCTCAGGAAACAATCTAACCGGAGAAATTCCAGAAACCGTTGAGGAATGTCAGAGCCTTGAATTTCTTCACCTACAAAACAATCTCTTTCAAGGTAGGATACCTTCTTCTTTGACTTCTTTGAAAGGTCTTCAGTATGTAGATCTTTCGAAGAACAACTTGTCAAGCCAAATTCCCAAAAATCTTCAGAGACTTCCATTTTTGATATATTTGAACCTTTCGTTCAATAATTTGGAGGGCGAGGTACCGAAAGAAGGAGTTTTCCGAAACATCAGTGCAATATCATTGGATGGAAATACCAAACTATGTGGTGGTGTTTCGGCATTGCGGCTACCAGCTTGCCCCATCAATGTACTAAAGAAGAAGAAGAAGAAGTTCAATGGTTTAAAACTATATTTCACCATTTCTTTAGTCGTTGGATGCTTTCTTCTGTTTGCAATCATCTCTGCACTTTATTGGAGGAGGAAAACTCAGAAGAAGAAACCAAAACAGTATGGTATCATTGGTATGAGAAGCGAGGCGGCAACATTCTCTGAGTTGTACACTTGTACTACAGAAGACTTCTAA

Protein Analysis

499

Amino Acids

54.93

Weight (kDa)

7.56

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 56 - 116 9.8e-06 Leucine rich repeat
LRR_8 PF13855 159 - 219 3.1e-08 Leucine rich repeat
LRR_14 PF23598 177 - 407 2.9e-20 Leucine-rich repeat region
LRR_8 PF13855 188 - 243 4.9e-06 Leucine rich repeat
LRR_8 PF13855 329 - 388 5.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1174
AccB1I GGYRCC 1 cut(s) 1174
AccB7I CCANNNNNTGG 1 cut(s) 752
AciI CCGC 2 cut(s) 1258, 1451
AclWI GGATC 2 cut(s) 661, 674
AcsI RAATTY 4 cut(s) 200, 957, 992, 1101
AcuI CTGAAG 2 cut(s) 1046, 1100
AfaI GTAC 4 cut(s) 1176, 1284, 1472, 1480
AfiI CCNNNNNNNGG 3 cut(s) 752, 892, 1184
AflIII ACRYGT 1 cut(s) 81
AgsI TTSAA 7 cut(s) 910, 992, 1022, 1054, 1144, 1156, 1309
AjnI CCWGG 1 cut(s) 819
AluBI AGCT 2 cut(s) 638, 1268
AluI AGCT 2 cut(s) 638, 1268
Alw26I GTCTC 1 cut(s) 1114
AlwI GGATC 2 cut(s) 661, 674
AoxI GGCC 1 cut(s) 565
ApeKI GCWGC 1 cut(s) 882
ApoI RAATTY 4 cut(s) 200, 957, 992, 1101
AseI ATTAAT 1 cut(s) 36
Asp700I GAANNNNTTC 3 cut(s) 355, 996, 1304
Asp718I GGTACC 1 cut(s) 1174
AspS9I GGNCC 1 cut(s) 565
AsuC2I CCSGG 1 cut(s) 218
AsuHPI GGTGA 3 cut(s) 682, 992, 1321
AsuII TTCGAA 1 cut(s) 1079
AxyI CCTNAGG 1 cut(s) 679
BamHI GGATCC 1 cut(s) 666
BanI GGYRCC 1 cut(s) 1174
BarI GAAGNNNNNNTAC 2 cut(s) 1018, 1050
BauI CACGAG 1 cut(s) 586
BbsI GAAGAC 1 cut(s) 1052
BbvI GCAGC 1 cut(s) 894
BccI CCATC 6 cut(s) 243, 607, 679, 823, 1214, 1283
BciT130I CCWGG 1 cut(s) 821
BciVI GTATCC 1 cut(s) 1023
BcnI CCSGG 1 cut(s) 218
BcoDI GTCTC 1 cut(s) 1114
BfaI CTAG 1 cut(s) 347
BfmI CTRYAG 3 cut(s) 459, 770, 1482
BfuI GTATCC 1 cut(s) 1023
BglII AGATCT 1 cut(s) 1072
BisI GCNGC 3 cut(s) 883, 1259, 1452
BlsI GCNGC 3 cut(s) 884, 1260, 1453
Bme1390I CCNGG 2 cut(s) 218, 821
BmgT120I GGNCC 1 cut(s) 565
BmiI GGNNCC 2 cut(s) 668, 1176
BmrFI CCNGG 2 cut(s) 218, 821
BmrI ACTGGG 1 cut(s) 141
BmsI GCATC 2 cut(s) 253, 1340
BmuI ACTGGG 1 cut(s) 141
BpiI GAAGAC 1 cut(s) 1052
BplI GAGNNNNNCTC 2 cut(s) 1384, 1416
BpmI CTGGAG 3 cut(s) 302, 692, 729
Bpu14I TTCGAA 1 cut(s) 1079
BpuMI CCSGG 1 cut(s) 218
Bsa29I ATCGAT 1 cut(s) 247
BsaJI CCNNGG 3 cut(s) 187, 496, 819
BsaWI WCCGGW 1 cut(s) 950
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 3 cut(s) 752, 892, 1184
Bse1I ACTGG 4 cut(s) 147, 319, 709, 883
Bse21I CCTNAGG 1 cut(s) 679
Bse3DI GCAATG 1 cut(s) 1253
BseBI CCWGG 1 cut(s) 821
BseCI ATCGAT 1 cut(s) 247
BseDI CCNNGG 3 cut(s) 187, 496, 819
BseGI GGATG 3 cut(s) 815, 1225, 1355
BseLI CCNNNNNNNGG 3 cut(s) 752, 892, 1184
BseMI GCAATG 1 cut(s) 1253
BseMII CTCAG 4 cut(s) 254, 948, 1415, 1455
BseNI ACTGG 4 cut(s) 147, 319, 709, 883
BseRI GAGGAG 1 cut(s) 1405
BseXI GCAGC 1 cut(s) 894
BsgI GTGCAG 1 cut(s) 1362
BshFI GGCC 1 cut(s) 567
BshNI GGYRCC 1 cut(s) 1174
BshVI ATCGAT 1 cut(s) 247
BsiSI CCGG 2 cut(s) 218, 951
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 3 cut(s) 752, 892, 1184
BsmAI GTCTC 1 cut(s) 1114
BsmFI GGGAC 1 cut(s) 18
BsnI GGCC 1 cut(s) 567
Bsp119I TTCGAA 1 cut(s) 1079
Bsp1407I TGTACA 1 cut(s) 1470
Bsp143I GATC 3 cut(s) 666, 781, 1072
BspACI CCGC 2 cut(s) 1258, 1451
BspANI GGCC 1 cut(s) 567
BspCNI CTCAG 4 cut(s) 253, 947, 1414, 1456
BspDI ATCGAT 1 cut(s) 247
BspLI GGNNCC 2 cut(s) 668, 1176
BspMAI CTGCAG 1 cut(s) 774
BspPI GGATC 2 cut(s) 661, 674
BspT104I TTCGAA 1 cut(s) 1079
BspT107I GGYRCC 1 cut(s) 1174
BsrDI GCAATG 1 cut(s) 1253
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 4 cut(s) 147, 319, 709, 883
BssECI CCNNGG 3 cut(s) 187, 496, 819
BssMI GATC 3 cut(s) 666, 781, 1072
BssSI CACGAG 1 cut(s) 586
BssT1I CCWWGG 1 cut(s) 496
Bst2BI CACGAG 1 cut(s) 586
Bst2UI CCWGG 1 cut(s) 821
Bst4CI ACNGT 3 cut(s) 551, 970, 1422
BstAUI TGTACA 1 cut(s) 1470
BstBI TTCGAA 1 cut(s) 1079
BstC8I GCNNGC 2 cut(s) 887, 1270
BstDEI CTNAG 7 cut(s) 11, 240, 679, 800, 934, 1401, 1464
BstF5I GGATG 3 cut(s) 815, 1225, 1355
BstKTI GATC 3 cut(s) 669, 784, 1075
BstMAI GTCTC 1 cut(s) 1114
BstMBI GATC 3 cut(s) 666, 781, 1072
BstMWI GCNNNNNNNGC 2 cut(s) 227, 871
BstNI CCWGG 1 cut(s) 821
BstNSI RCATGY 3 cut(s) 85, 166, 835
BstSCI CCNGG 2 cut(s) 216, 819
BstSFI CTRYAG 3 cut(s) 459, 770, 1482
BstV1I GCAGC 1 cut(s) 894
BstV2I GAAGAC 1 cut(s) 1052
BstX2I RGATCY 2 cut(s) 666, 1072
BstXI CCANNNNNNTGG 1 cut(s) 827
BstYI RGATCY 2 cut(s) 666, 1072
Bsu15I ATCGAT 1 cut(s) 247
Bsu36I CCTNAGG 1 cut(s) 679
BsuI GTATCC 1 cut(s) 1023
BsuRI GGCC 1 cut(s) 567
BsuTUI ATCGAT 1 cut(s) 247
BtsCI GGATG 3 cut(s) 815, 1225, 1355
BtsIMutI CAGTG 2 cut(s) 326, 1210
Cac8I GCNNGC 2 cut(s) 887, 1270
Cfr13I GGNCC 1 cut(s) 565
ClaI ATCGAT 1 cut(s) 247
Csp6I GTAC 4 cut(s) 1175, 1283, 1471, 1479
CspCI CAANNNNNGTGG 4 cut(s) 280, 315, 1219, 1254
CviAII CATG 3 cut(s) 82, 163, 832
CviQI GTAC 4 cut(s) 1175, 1283, 1471, 1479
DdeI CTNAG 7 cut(s) 11, 240, 679, 800, 934, 1401, 1464
DpnI GATC 3 cut(s) 668, 783, 1074
DpnII GATC 3 cut(s) 666, 781, 1072
DraI TTTAAA 1 cut(s) 1317
Eco130I CCWWGG 1 cut(s) 496
Eco57I CTGAAG 2 cut(s) 1046, 1100
Eco81I CCTNAGG 1 cut(s) 679
EcoRI GAATTC 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 819
EcoT14I CCWWGG 1 cut(s) 496
ErhI CCWWGG 1 cut(s) 496
FaeI CATG 3 cut(s) 85, 166, 835
FalI AAGNNNNNCTT 4 cut(s) 343, 375, 1073, 1105
FaqI GGGAC 1 cut(s) 18
FatI CATG 3 cut(s) 81, 162, 831
Fnu4HI GCNGC 3 cut(s) 883, 1259, 1452
FokI GGATG 3 cut(s) 802, 1232, 1362
Fsp4HI GCNGC 3 cut(s) 883, 1259, 1452
FspBI CTAG 1 cut(s) 347
GluI GCNGC 3 cut(s) 883, 1259, 1452
GsuI CTGGAG 3 cut(s) 302, 692, 729
HaeIII GGCC 1 cut(s) 567
HapII CCGG 2 cut(s) 218, 951
Hin1II CATG 3 cut(s) 85, 166, 835
HinfI GANTC 5 cut(s) 484, 489, 523, 705, 735
HpaII CCGG 2 cut(s) 218, 951
HphI GGTGA 3 cut(s) 682, 992, 1321
Hpy166II GTNNAC 2 cut(s) 585, 1473
Hpy188I TCNGA 6 cut(s) 847, 984, 1119, 1196, 1404, 1465
Hpy188III TCNNGA 8 cut(s) 207, 264, 527, 586, 746, 919, 936, 962
Hpy8I GTNNAC 2 cut(s) 585, 1473
HpyAV CCTTC 3 cut(s) 725, 1044, 1178
HpyCH4III ACNGT 3 cut(s) 551, 970, 1422
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 7 cut(s) 94, 399, 628, 772, 1208, 1367, 1379
HpyF10VI GCNNNNNNNGC 2 cut(s) 227, 871
HpyF3I CTNAG 7 cut(s) 11, 240, 679, 800, 934, 1401, 1464
HpySE526I ACGT 1 cut(s) 276
Hsp92II CATG 3 cut(s) 85, 166, 835
KpnI GGTACC 1 cut(s) 1178
Kzo9I GATC 3 cut(s) 666, 781, 1072
Lsp1109I GCAGC 1 cut(s) 894
LweI GCATC 2 cut(s) 253, 1340
MaeI CTAG 1 cut(s) 347
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 1 cut(s) 615
MalI GATC 3 cut(s) 668, 783, 1074
MboI GATC 3 cut(s) 666, 781, 1072
MflI RGATCY 2 cut(s) 666, 1072
MlyI GAGTC 3 cut(s) 478, 483, 699
MmeI TCCRAC 2 cut(s) 644, 1327
MroXI GAANNNNTTC 3 cut(s) 355, 996, 1304
MseI TTAA 5 cut(s) 36, 78, 429, 776, 1316
MslI CAYNNNNRTG 2 cut(s) 830, 1436
MspI CCGG 2 cut(s) 218, 951
MspR9I CCNGG 2 cut(s) 218, 821
MvaI CCWGG 1 cut(s) 821
MwoI GCNNNNNNNGC 2 cut(s) 227, 871
NciI CCSGG 1 cut(s) 218
NdeII GATC 3 cut(s) 666, 781, 1072
NlaIII CATG 3 cut(s) 85, 166, 835
NlaIV GGNNCC 2 cut(s) 668, 1176
NmeAIII GCCGAG 1 cut(s) 168
NspI RCATGY 3 cut(s) 85, 166, 835
NspV TTCGAA 1 cut(s) 1079
PciI ACATGT 1 cut(s) 81
PdmI GAANNNNTTC 3 cut(s) 355, 996, 1304
PfeI GAWTC 2 cut(s) 523, 735
PflMI CCANNNNNTGG 1 cut(s) 752
PkrI GCNGC 3 cut(s) 884, 1260, 1453
PleI GAGTC 3 cut(s) 478, 483, 699
PpsI GAGTC 3 cut(s) 478, 483, 699
PscI ACATGT 1 cut(s) 81
PshBI ATTAAT 1 cut(s) 36
Psp6I CCWGG 1 cut(s) 819
PspGI CCWGG 1 cut(s) 819
PspN4I GGNNCC 2 cut(s) 668, 1176
PspPI GGNCC 1 cut(s) 565
PstI CTGCAG 1 cut(s) 774
PsuI RGATCY 2 cut(s) 666, 1072
RsaI GTAC 4 cut(s) 1176, 1284, 1472, 1480
RsaNI GTAC 4 cut(s) 1175, 1283, 1471, 1479
RseI CAYNNNNRTG 2 cut(s) 830, 1436
SaqAI TTAA 5 cut(s) 36, 78, 429, 776, 1316
SatI GCNGC 3 cut(s) 883, 1259, 1452
Sau3AI GATC 3 cut(s) 666, 781, 1072
Sau96I GGNCC 1 cut(s) 565
SchI GAGTC 3 cut(s) 478, 483, 699
ScrFI CCNGG 2 cut(s) 218, 821
SfaNI GCATC 2 cut(s) 253, 1340
SfcI CTRYAG 3 cut(s) 459, 770, 1482
SfuI TTCGAA 1 cut(s) 1079
SmiMI CAYNNNNRTG 2 cut(s) 830, 1436
SsiI CCGC 2 cut(s) 1258, 1451
SspMI CTAG 1 cut(s) 347
StyD4I CCNGG 2 cut(s) 216, 819
StyI CCWWGG 1 cut(s) 496
TaaI ACNGT 3 cut(s) 551, 970, 1422
TaiI ACGT 1 cut(s) 279
TaqI TCGA 5 cut(s) 247, 487, 570, 703, 1079
TaqII GACCGA 1 cut(s) 171
TatI WGTACW 3 cut(s) 1282, 1470, 1478
TauI GCSGC 2 cut(s) 1261, 1454
TfiI GAWTC 2 cut(s) 523, 735
Tru1I TTAA 5 cut(s) 36, 78, 429, 776, 1316
Tru9I TTAA 5 cut(s) 36, 78, 429, 776, 1316
TscAI CASTG 2 cut(s) 326, 1210
TseI GCWGC 1 cut(s) 882
TspDTI ATGAA 3 cut(s) 93, 213, 738
TspRI CASTG 2 cut(s) 326, 1210
Van91I CCANNNNNTGG 1 cut(s) 752
VspI ATTAAT 1 cut(s) 36
XapI RAATTY 4 cut(s) 200, 957, 992, 1101
XceI RCATGY 3 cut(s) 85, 166, 835
XmnI GAANNNNTTC 3 cut(s) 355, 996, 1304
XspI CTAG 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.