Belongs to the protein kinase superfamily. Ser Thr protein kinase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 83 - 128 | 1.9e-09 | PPR repeat family |
| PPR_2 | PF13041 | 181 - 228 | 6.8e-09 | PPR repeat family |
| PPR | PF01535 | 184 - 213 | 8.4e-09 | PPR repeat |
| PPR_2 | PF13041 | 283 - 329 | 5.8e-10 | PPR repeat family |
| PPR | PF01535 | 285 - 312 | 1.6e-08 | PPR repeat |
| PPR | PF01535 | 385 - 413 | 4.6e-06 | PPR repeat |
| PPR_2 | PF13041 | 482 - 527 | 2.6e-06 | PPR repeat family |
| PPR_2 | PF13041 | 583 - 631 | 4.9e-09 | PPR repeat family |
| PPR | PF01535 | 586 - 615 | 9.2e-06 | PPR repeat |
| E_motif | PF20431 | 705 - 763 | 3.4e-14 | E motif |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1273 |
| AccBSI | CCGCTC | 1 cut(s) | 2004 |
| AciI | CCGC | 3 cut(s) | 514, 1231, 2002 |
| AclWI | GGATC | 4 cut(s) | 1264, 1312, 1615, 2261 |
| AcsI | RAATTY | 5 cut(s) | 794, 819, 938, 1162, 2152 |
| AcuI | CTGAAG | 1 cut(s) | 348 |
| AcvI | CACGTG | 1 cut(s) | 1445 |
| AfaI | GTAC | 7 cut(s) | 102, 578, 788, 881, 1074, 1691, 1742 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 252, 384, 430, 683, 2007 |
| AflIII | ACRYGT | 2 cut(s) | 1297, 2125 |
| AjnI | CCWGG | 2 cut(s) | 1305, 2269 |
| AleI | CACNNNNGTG | 1 cut(s) | 968 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 321, 353 |
| Alw21I | GWGCWC | 3 cut(s) | 274, 975, 1974 |
| Alw26I | GTCTC | 2 cut(s) | 186, 2134 |
| AlwI | GGATC | 4 cut(s) | 1264, 1312, 1615, 2261 |
| AoxI | GGCC | 1 cut(s) | 230 |
| ApeKI | GCWGC | 6 cut(s) | 21, 1556, 1598, 1629, 2120, 2198 |
| ApoI | RAATTY | 5 cut(s) | 794, 819, 938, 1162, 2152 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 33, 59, 65, 91, 1750, 1782 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 440, 615 |
| AspA2I | CCTAGG | 1 cut(s) | 1961 |
| AspS9I | GGNCC | 2 cut(s) | 231, 1303 |
| AsuHPI | GGTGA | 5 cut(s) | 413, 509, 1768, 1808, 1814 |
| AvaII | GGWCC | 1 cut(s) | 1303 |
| AvrII | CCTAGG | 1 cut(s) | 1961 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1931, 1963, 1977, 2009 |
| BbrPI | CACGTG | 1 cut(s) | 1445 |
| BbsI | GAAGAC | 3 cut(s) | 69, 1500, 1917 |
| Bbv12I | GWGCWC | 3 cut(s) | 274, 975, 1974 |
| BbvCI | CCTCAGC | 1 cut(s) | 2025 |
| BbvI | GCAGC | 6 cut(s) | 33, 1568, 1585, 1616, 2107, 2210 |
| BccI | CCATC | 5 cut(s) | 469, 629, 829, 1960, 2278 |
| BceAI | ACGGC | 1 cut(s) | 1859 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1370, 1404 |
| BciT130I | CCWGG | 2 cut(s) | 1307, 2271 |
| BclI | TGATCA | 4 cut(s) | 120, 369, 1170, 1855 |
| BcoDI | GTCTC | 2 cut(s) | 186, 2134 |
| BfaI | CTAG | 7 cut(s) | 90, 489, 666, 1695, 1862, 1871, 1962 |
| BfmI | CTRYAG | 1 cut(s) | 1498 |
| BisI | GCNGC | 6 cut(s) | 22, 1557, 1599, 1630, 2121, 2199 |
| BlnI | CCTAGG | 1 cut(s) | 1961 |
| BlsI | GCNGC | 6 cut(s) | 23, 1558, 1600, 1631, 2122, 2200 |
| Bme1390I | CCNGG | 2 cut(s) | 1307, 2271 |
| Bme18I | GGWCC | 1 cut(s) | 1303 |
| BmgT120I | GGNCC | 2 cut(s) | 231, 1303 |
| BmrFI | CCNGG | 2 cut(s) | 1307, 2271 |
| BmrI | ACTGGG | 1 cut(s) | 1349 |
| BmsI | GCATC | 8 cut(s) | 427, 802, 1218, 1402, 1536, 1543, 1581, 2050 |
| BmuI | ACTGGG | 1 cut(s) | 1349 |
| BpiI | GAAGAC | 3 cut(s) | 69, 1500, 1917 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2025 |
| BpuEI | CTTGAG | 1 cut(s) | 2004 |
| BsaAI | YACGTR | 2 cut(s) | 1086, 1445 |
| BsaI | GGTCTC | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 3 cut(s) | 1306, 1624, 1961 |
| BsaWI | WCCGGW | 2 cut(s) | 646, 1663 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 93, 123, 678, 708 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 252, 384, 430, 683, 2007 |
| Bse1I | ACTGG | 3 cut(s) | 81, 1344, 1846 |
| BseBI | CCWGG | 2 cut(s) | 1307, 2271 |
| BseDI | CCNNGG | 3 cut(s) | 1306, 1624, 1961 |
| BseGI | GGATG | 4 cut(s) | 965, 1756, 1971, 2289 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 252, 384, 430, 683, 2007 |
| BseMII | CTCAG | 5 cut(s) | 202, 462, 1306, 2016, 2145 |
| BseNI | ACTGG | 3 cut(s) | 81, 1344, 1846 |
| BseXI | GCAGC | 6 cut(s) | 33, 1568, 1585, 1616, 2107, 2210 |
| BseYI | CCCAGC | 1 cut(s) | 383 |
| BsgI | GTGCAG | 1 cut(s) | 2106 |
| BshFI | GGCC | 1 cut(s) | 232 |
| BsiHKAI | GWGCWC | 3 cut(s) | 274, 975, 1974 |
| BsiSI | CCGG | 2 cut(s) | 647, 1664 |
| BslFI | GGGAC | 3 cut(s) | 860, 1010, 1801 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 252, 384, 430, 683, 2007 |
| BsmAI | GTCTC | 2 cut(s) | 186, 2134 |
| BsmFI | GGGAC | 3 cut(s) | 860, 1010, 1801 |
| BsmI | GAATGC | 2 cut(s) | 1145, 1678 |
| BsnI | GGCC | 1 cut(s) | 232 |
| Bso31I | GGTCTC | 1 cut(s) | 186 |
| Bsp1286I | GDGCHC | 3 cut(s) | 274, 975, 1974 |
| Bsp1407I | TGTACA | 1 cut(s) | 1740 |
| Bsp19I | CCATGG | 1 cut(s) | 1624 |
| BspACI | CCGC | 3 cut(s) | 514, 1231, 2002 |
| BspANI | GGCC | 1 cut(s) | 232 |
| BspCNI | CTCAG | 5 cut(s) | 201, 461, 1305, 2017, 2144 |
| BspPI | GGATC | 4 cut(s) | 1264, 1312, 1615, 2261 |
| BspTNI | GGTCTC | 1 cut(s) | 186 |
| BsrBI | CCGCTC | 1 cut(s) | 2004 |
| BsrGI | TGTACA | 1 cut(s) | 1740 |
| BsrI | ACTGG | 3 cut(s) | 81, 1344, 1846 |
| BssECI | CCNNGG | 3 cut(s) | 1306, 1624, 1961 |
| BssT1I | CCWWGG | 2 cut(s) | 1624, 1961 |
| Bst2UI | CCWGG | 2 cut(s) | 1307, 2271 |
| Bst4CI | ACNGT | 8 cut(s) | 425, 581, 730, 868, 888, 1325, 1499, 1916 |
| Bst6I | CTCTTC | 2 cut(s) | 88, 897 |
| BstAUI | TGTACA | 1 cut(s) | 1740 |
| BstBAI | YACGTR | 2 cut(s) | 1086, 1445 |
| BstC8I | GCNNGC | 5 cut(s) | 514, 678, 750, 1480, 2092 |
| BstDEI | CTNAG | 8 cut(s) | 35, 188, 448, 1292, 1523, 2025, 2084, 2131 |
| BstDSI | CCRYGG | 1 cut(s) | 1624 |
| BstF5I | GGATG | 4 cut(s) | 965, 1756, 1971, 2289 |
| BstMAI | GTCTC | 2 cut(s) | 186, 2134 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1713, 1817, 1871 |
| BstNI | CCWGG | 2 cut(s) | 1307, 2271 |
| BstNSI | RCATGY | 4 cut(s) | 752, 1301, 1482, 2129 |
| BstSCI | CCNGG | 2 cut(s) | 1305, 2269 |
| BstSFI | CTRYAG | 1 cut(s) | 1498 |
| BstSNI | TACGTA | 1 cut(s) | 1086 |
| BstV1I | GCAGC | 6 cut(s) | 33, 1568, 1585, 1616, 2107, 2210 |
| BstV2I | GAAGAC | 3 cut(s) | 69, 1500, 1917 |
| BstX2I | RGATCY | 2 cut(s) | 1620, 2266 |
| BstYI | RGATCY | 2 cut(s) | 1620, 2266 |
| BsuRI | GGCC | 1 cut(s) | 232 |
| BtgI | CCRYGG | 1 cut(s) | 1624 |
| BtsCI | GGATG | 4 cut(s) | 965, 1756, 1971, 2289 |
| BtsIMutI | CAGTG | 4 cut(s) | 116, 372, 864, 1321 |
| Cac8I | GCNNGC | 5 cut(s) | 514, 678, 750, 1480, 2092 |
| Cfr13I | GGNCC | 2 cut(s) | 231, 1303 |
| Csp6I | GTAC | 7 cut(s) | 101, 577, 787, 880, 1073, 1690, 1741 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 209, 244 |
| CviQI | GTAC | 7 cut(s) | 101, 577, 787, 880, 1073, 1690, 1741 |
| DdeI | CTNAG | 8 cut(s) | 35, 188, 448, 1292, 1523, 2025, 2084, 2131 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1273 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1273 |
| Eam1104I | CTCTTC | 2 cut(s) | 88, 897 |
| EarI | CTCTTC | 2 cut(s) | 88, 897 |
| Eco105I | TACGTA | 1 cut(s) | 1086 |
| Eco130I | CCWWGG | 2 cut(s) | 1624, 1961 |
| Eco31I | GGTCTC | 1 cut(s) | 186 |
| Eco32I | GATATC | 1 cut(s) | 663 |
| Eco47I | GGWCC | 1 cut(s) | 1303 |
| Eco57I | CTGAAG | 1 cut(s) | 348 |
| Eco72I | CACGTG | 1 cut(s) | 1445 |
| EcoRI | GAATTC | 3 cut(s) | 938, 1162, 2152 |
| EcoRII | CCWGG | 2 cut(s) | 1305, 2269 |
| EcoRV | GATATC | 1 cut(s) | 663 |
| EcoT14I | CCWWGG | 2 cut(s) | 1624, 1961 |
| EcoT22I | ATGCAT | 2 cut(s) | 327, 472 |
| ErhI | CCWWGG | 2 cut(s) | 1624, 1961 |
| FaqI | GGGAC | 3 cut(s) | 860, 1010, 1801 |
| FauI | CCCGC | 2 cut(s) | 521, 2009 |
| FauNDI | CATATG | 2 cut(s) | 1783, 1792 |
| FbaI | TGATCA | 4 cut(s) | 120, 369, 1170, 1855 |
| Fnu4HI | GCNGC | 6 cut(s) | 22, 1557, 1599, 1630, 2121, 2199 |
| FokI | GGATG | 4 cut(s) | 952, 1763, 1978, 2296 |
| Fsp4HI | GCNGC | 6 cut(s) | 22, 1557, 1599, 1630, 2121, 2199 |
| FspBI | CTAG | 7 cut(s) | 90, 489, 666, 1695, 1862, 1871, 1962 |
| GluI | GCNGC | 6 cut(s) | 22, 1557, 1599, 1630, 2121, 2199 |
| GsaI | CCCAGC | 1 cut(s) | 387 |
| HaeIII | GGCC | 1 cut(s) | 232 |
| HapII | CCGG | 2 cut(s) | 647, 1664 |
| HincII | GTYRAC | 2 cut(s) | 1366, 1990 |
| HindII | GTYRAC | 2 cut(s) | 1366, 1990 |
| HindIII | AAGCTT | 1 cut(s) | 603 |
| HinfI | GANTC | 7 cut(s) | 848, 1148, 1250, 1349, 1519, 2256, 2290 |
| HpaII | CCGG | 2 cut(s) | 647, 1664 |
| HphI | GGTGA | 5 cut(s) | 413, 509, 1768, 1808, 1814 |
| Hpy166II | GTNNAC | 7 cut(s) | 103, 354, 500, 986, 1303, 1366, 1990 |
| Hpy188I | TCNGA | 8 cut(s) | 191, 269, 451, 567, 1295, 1354, 1657, 2134 |
| Hpy188III | TCNNGA | 3 cut(s) | 305, 398, 1853 |
| Hpy8I | GTNNAC | 7 cut(s) | 103, 354, 500, 986, 1303, 1366, 1990 |
| HpyAV | CCTTC | 7 cut(s) | 372, 430, 1199, 1793, 2003, 2047, 2293 |
| HpyCH4III | ACNGT | 8 cut(s) | 425, 581, 730, 868, 888, 1325, 1499, 1916 |
| HpyCH4IV | ACGT | 3 cut(s) | 15, 1085, 1444 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1713, 1817, 1871 |
| HpyF3I | CTNAG | 8 cut(s) | 35, 188, 448, 1292, 1523, 2025, 2084, 2131 |
| HpySE526I | ACGT | 3 cut(s) | 15, 1085, 1444 |
| Ksp22I | TGATCA | 4 cut(s) | 120, 369, 1170, 1855 |
| LmnI | GCTCC | 3 cut(s) | 978, 1721, 1969 |
| Lsp1109I | GCAGC | 6 cut(s) | 33, 1568, 1585, 1616, 2107, 2210 |
| LweI | GCATC | 8 cut(s) | 427, 802, 1218, 1402, 1536, 1543, 1581, 2050 |
| MaeI | CTAG | 7 cut(s) | 90, 489, 666, 1695, 1862, 1871, 1962 |
| MaeII | ACGT | 3 cut(s) | 15, 1085, 1444 |
| MaeIII | GTNAC | 5 cut(s) | 1178, 1235, 1264, 1453, 1756 |
| MbiI | CCGCTC | 1 cut(s) | 2004 |
| MboII | GAAGA | 9 cut(s) | 69, 105, 914, 1505, 1838, 1841, 1922, 1951, 2120 |
| MfeI | CAATTG | 1 cut(s) | 2147 |
| MflI | RGATCY | 2 cut(s) | 1620, 2266 |
| MhlI | GDGCHC | 3 cut(s) | 274, 975, 1974 |
| MluCI | AATT | 9 cut(s) | 630, 794, 819, 913, 938, 1162, 1470, 2147, 2152 |
| MlyI | GAGTC | 2 cut(s) | 842, 2250 |
| MmeI | TCCRAC | 1 cut(s) | 839 |
| MnlI | CCTC | 9 cut(s) | 218, 546, 592, 680, 700, 898, 1531, 2020, 2226 |
| Mph1103I | ATGCAT | 2 cut(s) | 327, 472 |
| MroXI | GAANNNNTTC | 2 cut(s) | 440, 615 |
| MseI | TTAA | 6 cut(s) | 626, 702, 1188, 1211, 1221, 1643 |
| MslI | CAYNNNNRTG | 4 cut(s) | 315, 753, 968, 1656 |
| MspI | CCGG | 2 cut(s) | 647, 1664 |
| MspR9I | CCNGG | 2 cut(s) | 1307, 2271 |
| MunI | CAATTG | 1 cut(s) | 2147 |
| Mva1269I | GAATGC | 2 cut(s) | 1145, 1678 |
| MvaI | CCWGG | 2 cut(s) | 1307, 2271 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1713, 1817, 1871 |
| NcoI | CCATGG | 1 cut(s) | 1624 |
| NdeI | CATATG | 2 cut(s) | 1783, 1792 |
| NmeAIII | GCCGAG | 1 cut(s) | 2120 |
| NmuCI | GTSAC | 2 cut(s) | 1264, 1756 |
| NsiI | ATGCAT | 2 cut(s) | 327, 472 |
| NspI | RCATGY | 4 cut(s) | 752, 1301, 1482, 2129 |
| OliI | CACNNNNGTG | 1 cut(s) | 968 |
| PaeI | GCATGC | 2 cut(s) | 752, 1482 |
| PciI | ACATGT | 2 cut(s) | 1297, 2125 |
| PctI | GAATGC | 2 cut(s) | 1145, 1678 |
| PdmI | GAANNNNTTC | 2 cut(s) | 440, 615 |
| PfeI | GAWTC | 5 cut(s) | 1148, 1250, 1349, 1519, 2290 |
| PfoI | TCCNGGA | 1 cut(s) | 2269 |
| PkrI | GCNGC | 6 cut(s) | 23, 1558, 1600, 1631, 2122, 2200 |
| PleI | GAGTC | 2 cut(s) | 842, 2250 |
| PmaCI | CACGTG | 1 cut(s) | 1445 |
| PmlI | CACGTG | 1 cut(s) | 1445 |
| PpsI | GAGTC | 2 cut(s) | 842, 2250 |
| Ppu21I | YACGTR | 2 cut(s) | 1086, 1445 |
| PscI | ACATGT | 2 cut(s) | 1297, 2125 |
| Psp6I | CCWGG | 2 cut(s) | 1305, 2269 |
| PspCI | CACGTG | 1 cut(s) | 1445 |
| PspFI | CCCAGC | 1 cut(s) | 383 |
| PspGI | CCWGG | 2 cut(s) | 1305, 2269 |
| PspPI | GGNCC | 2 cut(s) | 231, 1303 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2059, 2091 |
| PsuI | RGATCY | 2 cut(s) | 1620, 2266 |
| RsaI | GTAC | 7 cut(s) | 102, 578, 788, 881, 1074, 1691, 1742 |
| RsaNI | GTAC | 7 cut(s) | 101, 577, 787, 880, 1073, 1690, 1741 |
| RseI | CAYNNNNRTG | 4 cut(s) | 315, 753, 968, 1656 |
| SaqAI | TTAA | 6 cut(s) | 626, 702, 1188, 1211, 1221, 1643 |
| SatI | GCNGC | 6 cut(s) | 22, 1557, 1599, 1630, 2121, 2199 |
| Sau96I | GGNCC | 2 cut(s) | 231, 1303 |
| SchI | GAGTC | 2 cut(s) | 842, 2250 |
| ScrFI | CCNGG | 2 cut(s) | 1307, 2271 |
| SduI | GDGCHC | 3 cut(s) | 274, 975, 1974 |
| SfaNI | GCATC | 8 cut(s) | 427, 802, 1218, 1402, 1536, 1543, 1581, 2050 |
| SfcI | CTRYAG | 1 cut(s) | 1498 |
| SinI | GGWCC | 1 cut(s) | 1303 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 315, 753, 968, 1656 |
| SmlI | CTYRAG | 1 cut(s) | 2019 |
| SmoI | CTYRAG | 1 cut(s) | 2019 |
| SnaBI | TACGTA | 1 cut(s) | 1086 |
| SphI | GCATGC | 2 cut(s) | 752, 1482 |
| Sse9I | AATT | 9 cut(s) | 630, 794, 819, 913, 938, 1162, 1470, 2147, 2152 |
| SsiI | CCGC | 3 cut(s) | 514, 1231, 2002 |
| SspI | AATATT | 1 cut(s) | 1728 |
| SspMI | CTAG | 7 cut(s) | 90, 489, 666, 1695, 1862, 1871, 1962 |
| StyD4I | CCNGG | 2 cut(s) | 1305, 2269 |
| StyI | CCWWGG | 2 cut(s) | 1624, 1961 |
| TaaI | ACNGT | 8 cut(s) | 425, 581, 730, 868, 888, 1325, 1499, 1916 |
| TaiI | ACGT | 3 cut(s) | 18, 1088, 1447 |
| TaqI | TCGA | 6 cut(s) | 306, 525, 659, 1380, 1683, 2186 |
| TaqII | GACCGA | 1 cut(s) | 1947 |
| TasI | AATT | 9 cut(s) | 630, 794, 819, 913, 938, 1162, 1470, 2147, 2152 |
| TatI | WGTACW | 5 cut(s) | 100, 786, 1072, 1689, 1740 |
| TfiI | GAWTC | 5 cut(s) | 1148, 1250, 1349, 1519, 2290 |
| Tru1I | TTAA | 6 cut(s) | 626, 702, 1188, 1211, 1221, 1643 |
| Tru9I | TTAA | 6 cut(s) | 626, 702, 1188, 1211, 1221, 1643 |
| TscAI | CASTG | 4 cut(s) | 123, 372, 871, 1328 |
| TseFI | GTSAC | 2 cut(s) | 1264, 1756 |
| TseI | GCWGC | 6 cut(s) | 21, 1556, 1598, 1629, 2120, 2198 |
| Tsp45I | GTSAC | 2 cut(s) | 1264, 1756 |
| TspGWI | ACGGA | 3 cut(s) | 202, 958, 965 |
| TspRI | CASTG | 4 cut(s) | 123, 372, 871, 1328 |
| VpaK11BI | GGWCC | 1 cut(s) | 1303 |
| XapI | RAATTY | 5 cut(s) | 794, 819, 938, 1162, 2152 |
| XceI | RCATGY | 4 cut(s) | 752, 1301, 1482, 2129 |
| XmaJI | CCTAGG | 1 cut(s) | 1961 |
| XmnI | GAANNNNTTC | 2 cut(s) | 440, 615 |
| XspI | CTAG | 7 cut(s) | 90, 489, 666, 1695, 1862, 1871, 1962 |
| Zsp2I | ATGCAT | 2 cut(s) | 327, 472 |