Rroxscaffold_4G00286920
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
7875489 .. 7878519
3031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00286920.1

Sequence Viewer

Length: 1764 bp
ATGGAACCATATCACCATATATACATTGGCAACCTCTCCTTTTTCAGGGACTTCAGCCTTCACAACAACAGCTTCTCTGGCAAGATTCCGCAACAAGTTGGACATTTATTCCGACTGCAATATCTCCGTCTCAATACCAACATGTTGGAGGGGGCAATTCCAGTCAACCTGACCTTGTGTGCGGAACTGAGCGTCTTAAATTTTGGAGGAAACCGCCTTCCCGGCAAAATTCCTTCAGAGATTAGGTCATTGAGGAAGCTTATGCATCTCAATCTAGAGAAAAACAATCTGACGGGACCCATCCCACCTTCCTTGGGGAATCTTTCATCACTCACTGTACTTGCCTTGGCATCCAACAATTTGGGGGGCAACGTACCAGAGGTGCTAGGCCGATTGAGAAGCTTATCAACTTTTGCAGTTGGTCCCAATAATCTCTCTGGTTTGATCCCTCCCTCCCTTTTTAACATATCATTTATGGAAAGATTCTCACTTACAGCCAATGAATTTGAAGGCAGTATTCCACCTGGTATAGGCCTAAACATGCCTAATCTCCAATTACTGACGCTTGGTGCAAATGAATTCTATGGACAAATCCCAACTTCACTTTCCAACGCTTCTCAACTTCATTGGCTTGATTTTGTGCAAAATAATTTTGTTGGCCAACTTCCTGCAAGATTATCAGGCTGGATCCCATCTTCCTTAGGAAACCTCATCCAATTGTCTGAACTCTACTTAGATGCTAATGAATTAGAAGGAAACATTCCTCCAAATATTGGTAACTGCAAAAGTGTGCAGCAGATGGATATATCAGACAATAAGCTTGGTGGAGATATACCACAACAACTAATTGGTCTTTCCGGTCGCCTTATTCTATCTCAACTTATCGCAAAACTCGCTAACTGGCATTCTGCCTGTGGAAATGGCTCCCTTTTGTTTGCAGTCGTCTTAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAAGAAACCATTAATAGCAGTGTCATCAATTAGCTTCCTTCCAAAGGTTTCATACCAGACACTTCACCATGCCACTGGCGGATTCTCTCTGAGCAATCAAATTGGATCAGGCGGTTTTGGCTCTGTATACAAATGGATTCTTAATCAAGAAGAAAACAACGTTGTTGCCATCAAGGTCCTCAACCTTCAACAGAAAGGTGCTTCCAAGAGTTTTGTGGCTGAATGCAATGCACTGAGAAATATCCGGCACATGAATCTTGTGAAGATCTTAACATGTTGCTCCACCACGGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTACACAGAGAAAATCAATCATGGAGTTTGAACCTTCTTCAAAGACTTAATATTGCTGTTGATGTGGCTTCTGCATTGTGTTATCTTCATGACTATTGTGAACCACAAATCATTCACTGCTACATGAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTTGCTCGTGTAGGTGATTTTGGGTTAGCAAGACTCATCTCAACAACCGTGGACTCCTCTCAAAATCAAAGAAGCTCAGTTGGGATAAAGGGTACCATTGGCTATGCTGCTCTAGAGTATGCGAATGGTGTTGAGCCATCAACAAGAGAAGGGGATGTATATAGTTATGGGGTCCTCGTTTTGCAAATGTTCACAGGAAGAAGACCCATCGATGATATGTTTAATGAGGGTTTGAACCTCCACAACTTTGTTAAGATGGCCATACCATGA

Protein Analysis

587

Amino Acids

64.68

Weight (kDa)

7.62

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 30 - 141 1.4e-10 Leucine-rich repeat region
Pkinase PF00069 355 - 570 2.9e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 356 - 574 5.1e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1586
AccB1I GGYRCC 1 cut(s) 1586
AccB7I CCANNNNNTGG 1 cut(s) 773
AccI GTMKAC 1 cut(s) 1104
AciI CCGC 5 cut(s) 89, 182, 214, 1056, 1089
AclI AACGTT 1 cut(s) 1137
AclWI GGATC 4 cut(s) 439, 682, 695, 1090
AcoI YGGCCR 2 cut(s) 658, 1752
AcsI RAATTY 4 cut(s) 199, 228, 503, 578
AcuI CTGAAG 2 cut(s) 37, 219
AfaI GTAC 3 cut(s) 339, 375, 1588
AfiI CCNNNNNNNGG 5 cut(s) 45, 314, 530, 773, 1021
AflIII ACRYGT 2 cut(s) 141, 1250
AgsI TTSAA 6 cut(s) 509, 1166, 1288, 1366, 1376, 1729
AjnI CCWGG 1 cut(s) 523
AjuI GAANNNNNNNTTGG 2 cut(s) 589, 621
AluBI AGCT 8 cut(s) 72, 259, 402, 820, 950, 1011, 1292, 1569
AluI AGCT 8 cut(s) 72, 259, 402, 820, 950, 1011, 1292, 1569
Alw26I GTCTC 1 cut(s) 134
AlwI GGATC 4 cut(s) 439, 682, 695, 1090
AoxI GGCC 4 cut(s) 388, 532, 658, 1752
ApeKI GCWGC 2 cut(s) 793, 1601
ApoI RAATTY 4 cut(s) 199, 228, 503, 578
AseI ATTAAT 1 cut(s) 989
Asp718I GGTACC 1 cut(s) 1586
AspS9I GGNCC 4 cut(s) 296, 422, 1153, 1666
AsuC2I CCSGG 1 cut(s) 222
AsuHPI GGTGA 3 cut(s) 5, 1034, 1520
AvaII GGWCC 4 cut(s) 296, 422, 1153, 1666
AxyI CCTNAGG 1 cut(s) 700
BalI TGGCCA 2 cut(s) 660, 1754
BamHI GGATCC 1 cut(s) 687
BanI GGYRCC 1 cut(s) 1586
BauI CACGAG 1 cut(s) 1500
BbsI GAAGAC 1 cut(s) 1702
BbvI GCAGC 2 cut(s) 805, 1588
BccI CCATC 7 cut(s) 308, 700, 793, 1154, 1639, 1709, 1744
BciT130I CCWGG 1 cut(s) 525
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 1 cut(s) 134
BfaI CTAG 4 cut(s) 275, 386, 1295, 1607
BglI GCCNNNNNGGC 1 cut(s) 222
BglII AGATCT 1 cut(s) 1242
BisI GCNGC 2 cut(s) 794, 1602
BlsI GCNGC 2 cut(s) 795, 1603
Bme1390I CCNGG 2 cut(s) 222, 525
Bme18I GGWCC 4 cut(s) 296, 422, 1153, 1666
BmgT120I GGNCC 4 cut(s) 296, 422, 1153, 1666
BmiI GGNNCC 8 cut(s) 6, 297, 298, 424, 689, 925, 1588, 1667
BmrFI CCNGG 2 cut(s) 222, 525
BmsI GCATC 3 cut(s) 274, 359, 727
BpiI GAAGAC 1 cut(s) 1702
BplI GAGNNNNNCTC 2 cut(s) 955, 987
BpuMI CCSGG 1 cut(s) 222
Bsa29I ATCGAT 1 cut(s) 1704
BsaJI CCNNGG 4 cut(s) 312, 345, 1263, 1542
BsaWI WCCGGW 1 cut(s) 857
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 314, 530, 773, 1021
Bse1I ACTGG 3 cut(s) 161, 905, 1057
Bse21I CCTNAGG 1 cut(s) 700
Bse3DI GCAATG 2 cut(s) 1210, 1477
BseBI CCWGG 1 cut(s) 525
BseCI ATCGAT 1 cut(s) 1704
BseDI CCNNGG 4 cut(s) 312, 345, 1263, 1542
BseGI GGATG 4 cut(s) 300, 350, 711, 1654
BseLI CCNNNNNNNGG 5 cut(s) 45, 314, 530, 773, 1021
BseMI GCAATG 2 cut(s) 1210, 1477
BseMII CTCAG 4 cut(s) 179, 1058, 1202, 1584
BseNI ACTGG 3 cut(s) 161, 905, 1057
BseRI GAGGAG 3 cut(s) 976, 1343, 1540
BseXI GCAGC 2 cut(s) 805, 1588
BsgI GTGCAG 1 cut(s) 812
Bsh1285I CGRYCG 1 cut(s) 862
BshFI GGCC 4 cut(s) 390, 534, 660, 1754
BshNI GGYRCC 1 cut(s) 1586
BshVI ATCGAT 1 cut(s) 1704
BsiEI CGRYCG 1 cut(s) 862
BsiSI CCGG 3 cut(s) 222, 858, 1222
BslFI GGGAC 3 cut(s) 62, 309, 408
BslI CCNNNNNNNGG 5 cut(s) 45, 314, 530, 773, 1021
BsmAI GTCTC 1 cut(s) 134
BsmBI CGTCTC 1 cut(s) 134
BsmFI GGGAC 3 cut(s) 62, 309, 408
BsmI GAATGC 2 cut(s) 904, 1205
BsnI GGCC 4 cut(s) 390, 534, 660, 1754
Bsp143I GATC 4 cut(s) 444, 687, 1082, 1242
BspACI CCGC 5 cut(s) 89, 182, 214, 1056, 1089
BspANI GGCC 4 cut(s) 390, 534, 660, 1754
BspCNI CTCAG 4 cut(s) 180, 1059, 1203, 1583
BspDI ATCGAT 1 cut(s) 1704
BspHI TCATGA 1 cut(s) 1423
BspLI GGNNCC 8 cut(s) 6, 297, 298, 424, 689, 925, 1588, 1667
BspPI GGATC 4 cut(s) 439, 682, 695, 1090
BspT107I GGYRCC 1 cut(s) 1586
BsrDI GCAATG 2 cut(s) 1210, 1477
BsrI ACTGG 3 cut(s) 161, 905, 1057
BssECI CCNNGG 4 cut(s) 312, 345, 1263, 1542
BssMI GATC 4 cut(s) 444, 687, 1082, 1242
BssNAI GTATAC 1 cut(s) 1105
BssSI CACGAG 1 cut(s) 1500
BssT1I CCWWGG 2 cut(s) 312, 345
Bst1107I GTATAC 1 cut(s) 1105
Bst2BI CACGAG 1 cut(s) 1500
Bst2UI CCWGG 1 cut(s) 525
Bst4CI ACNGT 2 cut(s) 337, 1543
BstDEI CTNAG 7 cut(s) 188, 700, 733, 946, 1067, 1211, 1570
BstDSI CCRYGG 2 cut(s) 1263, 1542
BstENI CCTNNNNNAGG 3 cut(s) 43, 528, 1019
BstF5I GGATG 4 cut(s) 300, 350, 711, 1654
BstKTI GATC 4 cut(s) 447, 690, 1085, 1245
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 4 cut(s) 444, 687, 1082, 1242
BstMCI CGRYCG 1 cut(s) 862
BstMWI GCNNNNNNNGC 4 cut(s) 78, 222, 893, 1095
BstNI CCWGG 1 cut(s) 525
BstNSI RCATGY 3 cut(s) 145, 544, 1254
BstSCI CCNGG 2 cut(s) 220, 523
BstV1I GCAGC 2 cut(s) 805, 1588
BstV2I GAAGAC 1 cut(s) 1702
BstX2I RGATCY 2 cut(s) 687, 1242
BstXI CCANNNNNNTGG 3 cut(s) 145, 361, 1052
BstYI RGATCY 2 cut(s) 687, 1242
BstZ17I GTATAC 1 cut(s) 1105
Bsu15I ATCGAT 1 cut(s) 1704
Bsu36I CCTNAGG 1 cut(s) 700
BsuRI GGCC 4 cut(s) 390, 534, 660, 1754
BsuTUI ATCGAT 1 cut(s) 1704
BtgI CCRYGG 2 cut(s) 1263, 1542
BtsCI GGATG 4 cut(s) 300, 350, 711, 1654
BtsI GCAGTG 2 cut(s) 1002, 1450
BtsIMutI CAGTG 5 cut(s) 333, 1002, 1050, 1208, 1450
CciI TCATGA 1 cut(s) 1423
Cfr13I GGNCC 4 cut(s) 296, 422, 1153, 1666
ClaI ATCGAT 1 cut(s) 1704
CseI GACGC 2 cut(s) 181, 571
CsiI ACCWGGT 1 cut(s) 523
Csp6I GTAC 3 cut(s) 338, 374, 1587
CspCI CAANNNNNGTGG 4 cut(s) 294, 329, 1524, 1559
CviQI GTAC 3 cut(s) 338, 374, 1587
DdeI CTNAG 7 cut(s) 188, 700, 733, 946, 1067, 1211, 1570
DpnI GATC 4 cut(s) 446, 689, 1084, 1244
DpnII GATC 4 cut(s) 444, 687, 1082, 1242
EaeI YGGCCR 2 cut(s) 658, 1752
EciI GGCGGA 1 cut(s) 1071
Eco130I CCWWGG 2 cut(s) 312, 345
Eco147I AGGCCT 1 cut(s) 534
Eco47I GGWCC 4 cut(s) 296, 422, 1153, 1666
Eco57I CTGAAG 2 cut(s) 37, 219
Eco81I CCTNAGG 1 cut(s) 700
EcoNI CCTNNNNNAGG 3 cut(s) 43, 528, 1019
EcoO109I RGGNCCY 3 cut(s) 296, 1153, 1666
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 1 cut(s) 523
EcoT14I CCWWGG 2 cut(s) 312, 345
EcoT22I ATGCAT 1 cut(s) 267
ErhI CCWWGG 2 cut(s) 312, 345
Esp3I CGTCTC 1 cut(s) 134
FaqI GGGAC 3 cut(s) 62, 309, 408
FblI GTMKAC 1 cut(s) 1104
Fnu4HI GCNGC 2 cut(s) 794, 1602
FokI GGATG 4 cut(s) 287, 337, 698, 1661
Fsp4HI GCNGC 2 cut(s) 794, 1602
FspBI CTAG 4 cut(s) 275, 386, 1295, 1607
GluI GCNGC 2 cut(s) 794, 1602
HaeIII GGCC 4 cut(s) 390, 534, 660, 1754
HapII CCGG 3 cut(s) 222, 858, 1222
HgaI GACGC 2 cut(s) 181, 571
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HindIII AAGCTT 3 cut(s) 257, 400, 818
HinfI GANTC 8 cut(s) 85, 319, 483, 1059, 1114, 1231, 1527, 1547
HpaII CCGG 3 cut(s) 222, 858, 1222
HphI GGTGA 3 cut(s) 5, 1034, 1520
Hpy166II GTNNAC 5 cut(s) 166, 1105, 1436, 1546, 1686
Hpy188I TCNGA 6 cut(s) 113, 238, 291, 724, 811, 1068
Hpy188III TCNNGA 5 cut(s) 275, 1124, 1424, 1481, 1607
Hpy8I GTNNAC 5 cut(s) 166, 1105, 1436, 1546, 1686
HpyCH4III ACNGT 2 cut(s) 337, 1543
HpyCH4IV ACGT 2 cut(s) 372, 1137
HpyF10VI GCNNNNNNNGC 4 cut(s) 78, 222, 893, 1095
HpyF3I CTNAG 7 cut(s) 188, 700, 733, 946, 1067, 1211, 1570
HpySE526I ACGT 2 cut(s) 372, 1137
KflI GGGWCCC 1 cut(s) 296
KpnI GGTACC 1 cut(s) 1590
Kzo9I GATC 4 cut(s) 444, 687, 1082, 1242
LmnI GCTCC 2 cut(s) 929, 1262
Lsp1109I GCAGC 2 cut(s) 805, 1588
LweI GCATC 3 cut(s) 274, 359, 727
MabI ACCWGGT 1 cut(s) 523
MaeI CTAG 4 cut(s) 275, 386, 1295, 1607
MaeII ACGT 2 cut(s) 372, 1137
MaeIII GTNAC 1 cut(s) 776
MalI GATC 4 cut(s) 446, 689, 1084, 1244
MboI GATC 4 cut(s) 444, 687, 1082, 1242
MboII GAAGA 9 cut(s) 687, 991, 1139, 1252, 1364, 1412, 1469, 1704, 1707
MfeI CAATTG 1 cut(s) 716
MflI RGATCY 2 cut(s) 687, 1242
MlsI TGGCCA 2 cut(s) 660, 1754
MluNI TGGCCA 2 cut(s) 660, 1754
MlyI GAGTC 2 cut(s) 1521, 1541
MmeI TCCRAC 5 cut(s) 79, 126, 136, 378, 633
Mox20I TGGCCA 2 cut(s) 660, 1754
Mph1103I ATGCAT 1 cut(s) 267
MscI TGGCCA 2 cut(s) 660, 1754
MseI TTAA 8 cut(s) 197, 462, 989, 1119, 1247, 1383, 1716, 1746
Msp20I TGGCCA 2 cut(s) 660, 1754
MspI CCGG 3 cut(s) 222, 858, 1222
MspR9I CCNGG 2 cut(s) 222, 525
MunI CAATTG 1 cut(s) 716
Mva1269I GAATGC 2 cut(s) 904, 1205
MvaI CCWGG 1 cut(s) 525
MwoI GCNNNNNNNGC 4 cut(s) 78, 222, 893, 1095
NciI CCSGG 1 cut(s) 222
NdeII GATC 4 cut(s) 444, 687, 1082, 1242
NlaIV GGNNCC 8 cut(s) 6, 297, 298, 424, 689, 925, 1588, 1667
NmeAIII GCCGAG 1 cut(s) 1491
NsiI ATGCAT 1 cut(s) 267
NspI RCATGY 3 cut(s) 145, 544, 1254
PagI TCATGA 1 cut(s) 1423
PceI AGGCCT 1 cut(s) 534
PciI ACATGT 2 cut(s) 141, 1250
PctI GAATGC 2 cut(s) 904, 1205
PfeI GAWTC 6 cut(s) 85, 319, 483, 1059, 1114, 1231
PflMI CCANNNNNTGG 1 cut(s) 773
PkrI GCNGC 2 cut(s) 795, 1603
PleI GAGTC 2 cut(s) 1521, 1541
PpsI GAGTC 2 cut(s) 1521, 1541
PpuMI RGGWCCY 3 cut(s) 296, 1153, 1666
PscI ACATGT 2 cut(s) 141, 1250
PshBI ATTAAT 1 cut(s) 989
Psp1406I AACGTT 1 cut(s) 1137
Psp5II RGGWCCY 3 cut(s) 296, 1153, 1666
Psp6I CCWGG 1 cut(s) 523
PspGI CCWGG 1 cut(s) 523
PspN4I GGNNCC 8 cut(s) 6, 297, 298, 424, 689, 925, 1588, 1667
PspPI GGNCC 4 cut(s) 296, 422, 1153, 1666
PspPPI RGGWCCY 3 cut(s) 296, 1153, 1666
PsuI RGATCY 2 cut(s) 687, 1242
RsaI GTAC 3 cut(s) 339, 375, 1588
RsaNI GTAC 3 cut(s) 338, 374, 1587
SaqAI TTAA 8 cut(s) 197, 462, 989, 1119, 1247, 1383, 1716, 1746
SatI GCNGC 2 cut(s) 794, 1602
Sau3AI GATC 4 cut(s) 444, 687, 1082, 1242
Sau96I GGNCC 4 cut(s) 296, 422, 1153, 1666
SchI GAGTC 2 cut(s) 1521, 1541
ScrFI CCNGG 2 cut(s) 222, 525
SexAI ACCWGGT 1 cut(s) 523
SfaNI GCATC 3 cut(s) 274, 359, 727
SinI GGWCC 4 cut(s) 296, 422, 1153, 1666
SseBI AGGCCT 1 cut(s) 534
SsiI CCGC 5 cut(s) 89, 182, 214, 1056, 1089
SspI AATATT 2 cut(s) 772, 1387
SspMI CTAG 4 cut(s) 275, 386, 1295, 1607
StuI AGGCCT 1 cut(s) 534
StyD4I CCNGG 2 cut(s) 220, 523
StyI CCWWGG 2 cut(s) 312, 345
TaaI ACNGT 2 cut(s) 337, 1543
TaiI ACGT 2 cut(s) 375, 1140
TaqI TCGA 1 cut(s) 1704
TatI WGTACW 1 cut(s) 337
TfiI GAWTC 6 cut(s) 85, 319, 483, 1059, 1114, 1231
Tru1I TTAA 8 cut(s) 197, 462, 989, 1119, 1247, 1383, 1716, 1746
Tru9I TTAA 8 cut(s) 197, 462, 989, 1119, 1247, 1383, 1716, 1746
TscAI CASTG 5 cut(s) 340, 1002, 1057, 1215, 1457
TseI GCWGC 2 cut(s) 793, 1601
TspDTI ATGAA 9 cut(s) 315, 516, 591, 614, 759, 1017, 1244, 1412, 1475
TspGWI ACGGA 2 cut(s) 116, 1280
TspRI CASTG 5 cut(s) 340, 1002, 1057, 1215, 1457
Van91I CCANNNNNTGG 1 cut(s) 773
VpaK11BI GGWCC 4 cut(s) 296, 422, 1153, 1666
VspI ATTAAT 1 cut(s) 989
XagI CCTNNNNNAGG 3 cut(s) 43, 528, 1019
XapI RAATTY 4 cut(s) 199, 228, 503, 578
XbaI TCTAGA 2 cut(s) 274, 1606
XceI RCATGY 3 cut(s) 145, 544, 1254
XcmI CCANNNNNNNNNTGG 2 cut(s) 23, 1189
XmiI GTMKAC 1 cut(s) 1104
XspI CTAG 4 cut(s) 275, 386, 1295, 1607
Zsp2I ATGCAT 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.