RLG00000027101
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
8431850 .. 8443504
11655 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027101

Sequence Viewer

Length: 2910 bp
ATGGCTGAGCGGGTAATTAATATGCGGAAACTGGCTCCCCCCAAGCACGATGACAAACAATCTCCTCATGGTAATCACTCTGGGAAGTCATCTTCATCCCCAGACAGTTCAGGCTTTGGTAGATCACTCTCAAAGAAATCCCTTGATATGGCTAAACGTCACATGCTGGATAGACTTCAGAGTTCAGAACTAGCTCTTAGTTTGTATTCCCGTGCAATTGGGGGCGAAAAGAGAAACAACCAAGCTAACAAGGTAACTGTGTTCATATATGCTGCAATAGTCTTCCCTACGGACTTCAGCCTTTACAACAACAGCTTCTCTGGCAAGATTCCGCAACAATTTGAACATTTAGTTCGACTGCGGCATCTCAATTTAAGTTCCAACATGTTGGAGGGGGGGATTCCAGTCAACCTGGCCTTCTGTCCGGAACTGAGCATCATAGGTATTGGATCAAACCACCATACTGACAAAATTCCTTCAGAGATTGGGTCACTGAGGAAGCTTGCGATTCTCAATCTAGCAAAAAACAATCTGACGGGATCCATCCCACCTTCCTTGGGGAATCTTTCATCACTCACTCTACTTTCCTTGGGATATAACAACTTGGTGGGCACCGTTCCAGAGGTGCTAGGCCGACTCAGAAGCTTATCAATTTTTGCAATTGGTTCCAATAATCTCACTGGTATGATTCCTCTCTCCCTTTTTAACATATCATCTATGAACGTCTTCTCACTTGCGGATAATAAGTTTAAGGGCCGTATTCCTCGTGGTATAGGCCTAACCATGCCTAATCTCCAACTAATGTACCTCGACATAAATGAATTCTCTGGACACATCCCAGCTTCACTTTCCAATGCTTCTCAGCTTCAAGCGCTTAATTTTGGGAATAATAATTTTGTTGGCCAAATTCCCGCAAGTTTTGGAAATTTTCCTAATCTCCAGCTGCTCATCTTCGAGTTAAATAATATAGGAACCAATTTCTCAACCCAATTGACTCAACTCTACCTTGGGGGCAATCAAATTGCCAGAACGATTCCTGAAACATTAGAAAATCTCAGCTATTTAATACTCTTGAGCTTGGAAGAAAACTTGTTCACAGGTACCATTCCAGCTTCTTTTGGGAAGCTACAAAAGCTGCAAATATTACATTTACGTTCCAATAGATTATCAGGCCGGATCCCATCTTCCTTAGGAAACCTCACCCAATTGTTTAAACTCCACTTATCGGAAAATGAATTAGAAGGAAGCATTCCTCCAAATATTGGTAACTGCAAAAATCTGCAACTGATCGATATATCAGACAATAAGCTTAGTGGAGATATACCATCACAGGTCATTGGTCTGTCCTCCTTCTCTATCTTGCTCAACTTATCGCAAAACTCCTTAACTGGCATTCTGCCTGTGGAAGTGGGGAACCACTTTCAAGGAATCATTCCTTCTTCTTTGGCTGCTTTGAGAGGTCTTCAGTATCTAGATCATTCACGAAACAACTTGTCAGGACATATTCCAAGAGACCTACAGAGGCTTCCATTCTTGATCCATTTGAACCTTTCGTTCAATAATTTGGAGGGTGAGGTACCGAAAGAAAGAGTCTTTCAAAACACAAGTGCAATATCATTGGATGGAAATACCAAACTTTGTGGAGGTGTTTCAGAACTGCAGCTACCAACATGCCCCATCAAAGTACCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACAATTTCCTTGGTCGCTGGATGCTCTCTTCTGTTTGCAGTTGTCTTAGCTCTTTATTGGAGGAGAAAAAGTCAAAAGAAGAAACCATTAATAGCAGTGTCATCAATCAACTTCATTTCAAAGGTTTCATTCCAGACACTTCATCAAGCTACTGACGGATTCTCTCCGAGTAATCAAATTGGGTCAGGTGGTTTTGGCACTGTATACAAAGGGATTCTTGATCAAGAAGAAAATAAAATTGTTGCCATAAAGGTCCTTAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTTGTGGCGGAATGCAATGCACTAAGAAATATCCGACACAGGAATCTTGTGAAGATCTTAACATGTTGCTTCAGCACGGATTACAATGGTAATGACTTCAAAGCTCTAATTTTTGAGTGTATGTCAAATAGAAGTTTAAAGGAGTGGCTGCACAAAGAAAACCAATCAAGGAGTTTGAACCTTATTCAAAGACTGAATATTGTTGTTGATGTGGCTTTTGTGTTGTGTTATCTTCATGACTATTGTGAACCACAAATCATTCACTGCGACATGAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTTGCTCGTGTTGGTGATTTTGGGTTAGCAAGACTCGTCTTAGCGACCACGAACTCCTCTCAAAATCAAAGTAGCACAATTAGGGTAAAGGGAACAATTGGCTATGCTGCTCCAGAGTATGCGAGTGGTGTTGAGCCATCAAGACAAGGGGATGTATATAGTTATGGGGTGCTCGTGTTGCAAATGTTTACAGGAAAAAGACCTATCGACAAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAATATGGCTATACCAGGAAGACTAATGCAGATTGTGGATCCTACTCTTCTTGCCACATTAGAAGAGGCAGCACCTGCGACAGCACAAAATGAAGTGAACTACATCCGTGGTTACAATAATAAAATCGAAGCAGATGAAGAAAACATTGACAATGAGAATTTAAGCAAGATTAACACTTATGTGTGGAAGTGCATACTTCCAATCCTTAAGATTGGACTTGCATGCTCGGAAGAATCTCCAAGGAATAGGATGTCTATGGAGGAGGTCCACAAAGAGCTACACCATATAAAAGCTTCTTACACTTGTGTTGACATCCGTCAAGAAAGGCCAAGAAGAAGCTGA

Protein Analysis

970

Amino Acids

107.14

Weight (kDa)

9.19

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 152 - 217 1.5e-06 Leucine-rich repeat region
LRR_8 PF13855 330 - 389 2e-08 Leucine rich repeat
LRR_14 PF23598 335 - 408 4.1e-06 Leucine-rich repeat region
Pkinase PF00069 632 - 849 2.7e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 633 - 847 1.5e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2650
Acc36I ACCTGC 1 cut(s) 2650
Acc65I GGTACC 2 cut(s) 1100, 1576
AccB1I GGYRCC 3 cut(s) 611, 1100, 1576
AccB7I CCANNNNNTGG 1 cut(s) 1262
AccBSI CCGCTC 1 cut(s) 10
AccI GTMKAC 1 cut(s) 1929
AccIII TCCGGA 1 cut(s) 424
AciI CCGC 7 cut(s) 10, 25, 332, 361, 737, 912, 2021
AclWI GGATC 8 cut(s) 457, 534, 547, 1171, 1184, 1531, 2600, 2613
AcoI YGGCCR 1 cut(s) 901
AcsI RAATTY 5 cut(s) 471, 821, 906, 925, 2725
AcuI CTGAAG 5 cut(s) 161, 280, 462, 1448, 2068
AfaI GTAC 4 cut(s) 806, 1102, 1578, 1686
AfeI AGCGCT 1 cut(s) 873
AfiI CCNNNNNNNGG 4 cut(s) 148, 557, 1225, 1262
AflII CTTAAG 1 cut(s) 2774
AflIII ACRYGT 2 cut(s) 384, 2075
AjnI CCWGG 2 cut(s) 411, 2581
AleI CACNNNNGTG 1 cut(s) 2747
Alw21I GWGCWC 1 cut(s) 2493
Alw26I GTCTC 1 cut(s) 1506
AlwI GGATC 8 cut(s) 457, 534, 547, 1171, 1184, 1531, 2600, 2613
AlwNI CAGNNNCTG 1 cut(s) 2642
Aor13HI TCCGGA 1 cut(s) 424
Aor51HI AGCGCT 1 cut(s) 873
AoxI GGCC 7 cut(s) 414, 631, 754, 775, 901, 1171, 2894
ApeKI GCWGC 8 cut(s) 272, 943, 1135, 1448, 1660, 2161, 2426, 2636
ApoI RAATTY 5 cut(s) 471, 821, 906, 925, 2725
AseI ATTAAT 2 cut(s) 18, 1814
Asp700I GAANNNNTTC 1 cut(s) 725
Asp718I GGTACC 2 cut(s) 1100, 1576
AspLEI GCGC 1 cut(s) 874
AspS9I GGNCC 3 cut(s) 754, 1978, 2833
AsuHPI GGTGA 3 cut(s) 1192, 1583, 2345
AvaII GGWCC 2 cut(s) 1978, 2833
AxyI CCTNAGG 1 cut(s) 1189
BaeGI GKGCMC 1 cut(s) 614
BaeI ACNNNNGTAYC 2 cut(s) 788, 821
BalI TGGCCA 1 cut(s) 903
BamHI GGATCC 3 cut(s) 539, 1176, 2605
BanI GGYRCC 3 cut(s) 611, 1100, 1576
BauI CACGAG 3 cut(s) 765, 2325, 2492
BbsI GAAGAC 4 cut(s) 274, 718, 1454, 2593
Bbv12I GWGCWC 1 cut(s) 2493
BbvI GCAGC 8 cut(s) 259, 930, 1122, 1435, 1672, 2148, 2413, 2648
BccI CCATC 6 cut(s) 551, 1189, 1333, 1616, 1685, 2464
BceAI ACGGC 1 cut(s) 741
BciT130I CCWGG 2 cut(s) 413, 2583
BclI TGATCA 1 cut(s) 1945
BcoDI GTCTC 1 cut(s) 1506
BfaI CTAG 4 cut(s) 191, 518, 629, 1472
BfmI CTRYAG 2 cut(s) 1517, 1658
BfoI RGCGCY 1 cut(s) 875
BfrI CTTAAG 1 cut(s) 2774
BfuAI ACCTGC 1 cut(s) 2650
BglII AGATCT 1 cut(s) 2067
BisI GCNGC 9 cut(s) 273, 362, 944, 1136, 1449, 1661, 2162, 2427, 2637
BlpI GCTNAGC 1 cut(s) 6
BlsI GCNGC 9 cut(s) 274, 363, 945, 1137, 1450, 1662, 2163, 2428, 2638
Bme1390I CCNGG 2 cut(s) 413, 2583
Bme18I GGWCC 2 cut(s) 1978, 2833
BmgT120I GGNCC 3 cut(s) 754, 1978, 2833
BmrFI CCNGG 2 cut(s) 413, 2583
BmsI GCATC 3 cut(s) 373, 444, 1736
BoxI GACNNNNGTC 1 cut(s) 2883
BpiI GAAGAC 4 cut(s) 274, 718, 1454, 2593
BpmI CTGGAG 2 cut(s) 923, 2415
Bpu1102I GCTNAGC 1 cut(s) 6
BpuEI CTTGAG 1 cut(s) 1093
Bsa29I ATCGAT 1 cut(s) 1290
BsaI GGTCTC 1 cut(s) 1506
BsaJI CCNNGG 6 cut(s) 555, 588, 1006, 1734, 2674, 2807
BsaWI WCCGGW 1 cut(s) 424
BsaXI ACNNNNNCTCC 2 cut(s) 1780, 1810
Bsc4I CCNNNNNNNGG 4 cut(s) 148, 557, 1225, 1262
Bse1I ACTGG 4 cut(s) 36, 404, 685, 1393
Bse21I CCTNAGG 1 cut(s) 1189
Bse3DI GCAATG 2 cut(s) 2035, 2302
BseAI TCCGGA 1 cut(s) 424
BseBI CCWGG 2 cut(s) 413, 2583
BseCI ATCGAT 1 cut(s) 1290
BseDI CCNNGG 6 cut(s) 555, 588, 1006, 1734, 2674, 2807
BseGI GGATG 9 cut(s) 95, 543, 834, 1627, 1751, 2476, 2670, 2823, 2880
BseLI CCNNNNNNNGG 4 cut(s) 148, 557, 1225, 1262
BseMI GCAATG 2 cut(s) 2035, 2302
BseMII CTCAG 5 cut(s) 422, 485, 652, 875, 1069
BseNI ACTGG 4 cut(s) 36, 404, 685, 1393
BseRI GAGGAG 4 cut(s) 54, 1801, 2365, 2843
BseSI GKGCMC 1 cut(s) 614
BseXI GCAGC 8 cut(s) 259, 930, 1122, 1435, 1672, 2148, 2413, 2648
BseYI CCCAGC 1 cut(s) 838
BsgI GTGCAG 1 cut(s) 2147
BshFI GGCC 7 cut(s) 416, 633, 756, 777, 903, 1173, 2896
BshNI GGYRCC 3 cut(s) 611, 1100, 1576
BshVI ATCGAT 1 cut(s) 1290
BsiHKAI GWGCWC 1 cut(s) 2493
BsiSI CCGG 2 cut(s) 425, 1174
BslI CCNNNNNNNGG 4 cut(s) 148, 557, 1225, 1262
BsmAI GTCTC 1 cut(s) 1506
BsmI GAATGC 3 cut(s) 1248, 1392, 2030
BsnI GGCC 7 cut(s) 416, 633, 756, 777, 903, 1173, 2896
Bso31I GGTCTC 1 cut(s) 1506
Bsp1286I GDGCHC 2 cut(s) 614, 2493
Bsp13I TCCGGA 1 cut(s) 424
Bsp1720I GCTNAGC 1 cut(s) 6
BspACI CCGC 7 cut(s) 10, 25, 332, 361, 737, 912, 2021
BspANI GGCC 7 cut(s) 416, 633, 756, 777, 903, 1173, 2896
BspCNI CTCAG 5 cut(s) 423, 486, 651, 874, 1068
BspDI ATCGAT 1 cut(s) 1290
BspEI TCCGGA 1 cut(s) 424
BspHI TCATGA 1 cut(s) 2248
BspMAI CTGCAG 1 cut(s) 1662
BspMI ACCTGC 1 cut(s) 2650
BspPI GGATC 8 cut(s) 457, 534, 547, 1171, 1184, 1531, 2600, 2613
BspT107I GGYRCC 3 cut(s) 611, 1100, 1576
BspTI CTTAAG 1 cut(s) 2774
BspTNI GGTCTC 1 cut(s) 1506
BsrBI CCGCTC 1 cut(s) 10
BsrDI GCAATG 2 cut(s) 2035, 2302
BsrI ACTGG 4 cut(s) 36, 404, 685, 1393
BssECI CCNNGG 6 cut(s) 555, 588, 1006, 1734, 2674, 2807
BssNAI GTATAC 1 cut(s) 1930
BssSI CACGAG 3 cut(s) 765, 2325, 2492
BssT1I CCWWGG 5 cut(s) 555, 588, 1006, 1734, 2807
Bst1107I GTATAC 1 cut(s) 1930
Bst2BI CACGAG 3 cut(s) 765, 2325, 2492
Bst2UI CCWGG 2 cut(s) 413, 2583
Bst4CI ACNGT 4 cut(s) 107, 259, 616, 1927
Bst6I CTCTTC 3 cut(s) 1758, 2619, 2625
BstAFI CTTAAG 1 cut(s) 2774
BstAPI GCANNNNNTGC 1 cut(s) 2642
BstC8I GCNNGC 2 cut(s) 504, 2791
BstDSI CCRYGG 1 cut(s) 2674
BstF5I GGATG 9 cut(s) 95, 543, 834, 1627, 1751, 2476, 2670, 2823, 2880
BstH2I RGCGCY 1 cut(s) 875
BstHHI GCGC 1 cut(s) 874
BstMAI GTCTC 1 cut(s) 1506
BstMWI GCNNNNNNNGC 5 cut(s) 321, 871, 1132, 2497, 2642
BstNI CCWGG 2 cut(s) 413, 2583
BstNSI RCATGY 5 cut(s) 166, 388, 1674, 2079, 2793
BstPAI GACNNNNGTC 1 cut(s) 2883
BstSCI CCNGG 2 cut(s) 411, 2581
BstSFI CTRYAG 2 cut(s) 1517, 1658
BstSLI GKGCMC 1 cut(s) 614
BstV1I GCAGC 8 cut(s) 259, 930, 1122, 1435, 1672, 2148, 2413, 2648
BstV2I GAAGAC 4 cut(s) 274, 718, 1454, 2593
BstX2I RGATCY 4 cut(s) 539, 1176, 2067, 2605
BstXI CCANNNNNNTGG 1 cut(s) 388
BstYI RGATCY 4 cut(s) 539, 1176, 2067, 2605
BstZ17I GTATAC 1 cut(s) 1930
Bsu15I ATCGAT 1 cut(s) 1290
Bsu36I CCTNAGG 1 cut(s) 1189
BsuRI GGCC 7 cut(s) 416, 633, 756, 777, 903, 1173, 2896
BsuTUI ATCGAT 1 cut(s) 1290
BtgI CCRYGG 1 cut(s) 2674
BtsCI GGATG 9 cut(s) 95, 543, 834, 1627, 1751, 2476, 2670, 2823, 2880
BtsI GCAGTG 2 cut(s) 1827, 2275
BtsIMutI CAGTG 5 cut(s) 491, 678, 1827, 1923, 2275
BveI ACCTGC 1 cut(s) 2650
Cac8I GCNNGC 2 cut(s) 504, 2791
CaiI CAGNNNCTG 1 cut(s) 2642
CciI TCATGA 1 cut(s) 2248
CfoI GCGC 1 cut(s) 874
Cfr13I GGNCC 3 cut(s) 754, 1978, 2833
ClaI ATCGAT 1 cut(s) 1290
Csp6I GTAC 4 cut(s) 805, 1101, 1577, 1685
CspCI CAANNNNNGTGG 4 cut(s) 537, 572, 1621, 1656
CviQI GTAC 4 cut(s) 805, 1101, 1577, 1685
DraI TTTAAA 3 cut(s) 1213, 2151, 2539
EaeI YGGCCR 1 cut(s) 901
Eam1104I CTCTTC 3 cut(s) 1758, 2619, 2625
EarI CTCTTC 3 cut(s) 1758, 2619, 2625
EciI GGCGGA 1 cut(s) 2036
Eco130I CCWWGG 5 cut(s) 555, 588, 1006, 1734, 2807
Eco147I AGGCCT 1 cut(s) 777
Eco31I GGTCTC 1 cut(s) 1506
Eco47I GGWCC 2 cut(s) 1978, 2833
Eco47III AGCGCT 1 cut(s) 873
Eco57I CTGAAG 5 cut(s) 161, 280, 462, 1448, 2068
Eco81I CCTNAGG 1 cut(s) 1189
EcoO109I RGGNCCY 1 cut(s) 1978
EcoRI GAATTC 1 cut(s) 821
EcoRII CCWGG 2 cut(s) 411, 2581
EcoT14I CCWWGG 5 cut(s) 555, 588, 1006, 1734, 2807
ErhI CCWWGG 5 cut(s) 555, 588, 1006, 1734, 2807
FalI AAGNNNNNCTT 2 cut(s) 1926, 1958
FauI CCCGC 2 cut(s) 3, 919
FbaI TGATCA 1 cut(s) 1945
FblI GTMKAC 1 cut(s) 1929
Fnu4HI GCNGC 9 cut(s) 273, 362, 944, 1136, 1449, 1661, 2162, 2427, 2637
FokI GGATG 9 cut(s) 82, 530, 821, 1634, 1758, 2483, 2657, 2830, 2867
Fsp4HI GCNGC 9 cut(s) 273, 362, 944, 1136, 1449, 1661, 2162, 2427, 2637
FspBI CTAG 4 cut(s) 191, 518, 629, 1472
GlaI GCGC 1 cut(s) 873
GluI GCNGC 9 cut(s) 273, 362, 944, 1136, 1449, 1661, 2162, 2427, 2637
GsaI CCCAGC 1 cut(s) 842
GsuI CTGGAG 2 cut(s) 923, 2415
HaeII RGCGCY 1 cut(s) 875
HaeIII GGCC 7 cut(s) 416, 633, 756, 777, 903, 1173, 2896
HapII CCGG 2 cut(s) 425, 1174
HhaI GCGC 1 cut(s) 874
Hin6I GCGC 1 cut(s) 872
HinP1I GCGC 1 cut(s) 872
HincII GTYRAC 2 cut(s) 409, 2878
HindII GTYRAC 2 cut(s) 409, 2878
HindIII AAGCTT 4 cut(s) 500, 643, 1307, 2859
HpaII CCGG 2 cut(s) 425, 1174
HphI GGTGA 3 cut(s) 1192, 1583, 2345
Hpy166II GTNNAC 9 cut(s) 409, 1095, 1725, 1930, 2261, 2508, 2665, 2836, 2878
Hpy8I GTNNAC 9 cut(s) 409, 1095, 1725, 1930, 2261, 2508, 2665, 2836, 2878
HpyAV CCTTC 7 cut(s) 427, 486, 561, 1235, 1360, 1446, 1997
HpyCH4III ACNGT 4 cut(s) 107, 259, 616, 1927
HpyCH4IV ACGT 3 cut(s) 157, 723, 1153
HpyF10VI GCNNNNNNNGC 5 cut(s) 321, 871, 1132, 2497, 2642
HpySE526I ACGT 3 cut(s) 157, 723, 1153
HspAI GCGC 1 cut(s) 872
Kpn2I TCCGGA 1 cut(s) 424
KpnI GGTACC 2 cut(s) 1104, 1580
Ksp22I TGATCA 1 cut(s) 1945
LmnI GCTCC 3 cut(s) 40, 2000, 2434
Lsp1109I GCAGC 8 cut(s) 259, 930, 1122, 1435, 1672, 2148, 2413, 2648
LweI GCATC 3 cut(s) 373, 444, 1736
MaeI CTAG 4 cut(s) 191, 518, 629, 1472
MaeII ACGT 3 cut(s) 157, 723, 1153
MaeIII GTNAC 5 cut(s) 158, 253, 489, 1265, 2678
MbiI CCGCTC 1 cut(s) 10
MfeI CAATTG 5 cut(s) 216, 660, 989, 1205, 2415
MflI RGATCY 4 cut(s) 539, 1176, 2067, 2605
MhlI GDGCHC 2 cut(s) 614, 2493
MlsI TGGCCA 1 cut(s) 903
MluNI TGGCCA 1 cut(s) 903
MlyI GAGTC 4 cut(s) 630, 988, 1599, 2346
MmeI TCCRAC 4 cut(s) 369, 405, 820, 2071
Mox20I TGGCCA 1 cut(s) 903
MroI TCCGGA 1 cut(s) 424
MroXI GAANNNNTTC 1 cut(s) 725
MscI TGGCCA 1 cut(s) 903
MslI CAYNNNNRTG 2 cut(s) 683, 2747
Msp20I TGGCCA 1 cut(s) 903
MspA1I CMGCKG 1 cut(s) 943
MspCI CTTAAG 1 cut(s) 2774
MspI CCGG 2 cut(s) 425, 1174
MspR9I CCNGG 2 cut(s) 413, 2583
MssI GTTTAAAC 1 cut(s) 1213
MunI CAATTG 5 cut(s) 216, 660, 989, 1205, 2415
Mva1269I GAATGC 3 cut(s) 1248, 1392, 2030
MvaI CCWGG 2 cut(s) 413, 2583
MwoI GCNNNNNNNGC 5 cut(s) 321, 871, 1132, 2497, 2642
NmeAIII GCCGAG 1 cut(s) 2316
NmuCI GTSAC 2 cut(s) 158, 489
NspI RCATGY 5 cut(s) 166, 388, 1674, 2079, 2793
OliI CACNNNNGTG 1 cut(s) 2747
PaeI GCATGC 1 cut(s) 2793
PagI TCATGA 1 cut(s) 2248
PaqCI CACCTGC 1 cut(s) 2650
PceI AGGCCT 1 cut(s) 777
PciI ACATGT 2 cut(s) 384, 2075
PctI GAATGC 3 cut(s) 1248, 1392, 2030
PdmI GAANNNNTTC 1 cut(s) 725
PflMI CCANNNNNTGG 1 cut(s) 1262
PkrI GCNGC 9 cut(s) 274, 363, 945, 1137, 1450, 1662, 2163, 2428, 2638
PleI GAGTC 4 cut(s) 630, 988, 1598, 2346
PmeI GTTTAAAC 1 cut(s) 1213
PpsI GAGTC 4 cut(s) 630, 988, 1598, 2346
PpuMI RGGWCCY 1 cut(s) 1978
PscI ACATGT 2 cut(s) 384, 2075
PshAI GACNNNNGTC 1 cut(s) 2883
PshBI ATTAAT 2 cut(s) 18, 1814
Psp5II RGGWCCY 1 cut(s) 1978
Psp6I CCWGG 2 cut(s) 411, 2581
PspFI CCCAGC 1 cut(s) 838
PspGI CCWGG 2 cut(s) 411, 2581
PspPI GGNCC 3 cut(s) 754, 1978, 2833
PspPPI RGGWCCY 1 cut(s) 1978
PsrI GAACNNNNNNTAC 2 cut(s) 1647, 1679
PstI CTGCAG 1 cut(s) 1662
PstNI CAGNNNCTG 1 cut(s) 2642
PsuI RGATCY 4 cut(s) 539, 1176, 2067, 2605
PvuII CAGCTG 1 cut(s) 943
RsaI GTAC 4 cut(s) 806, 1102, 1578, 1686
RsaNI GTAC 4 cut(s) 805, 1101, 1577, 1685
RseI CAYNNNNRTG 2 cut(s) 683, 2747
SatI GCNGC 9 cut(s) 273, 362, 944, 1136, 1449, 1661, 2162, 2427, 2637
Sau96I GGNCC 3 cut(s) 754, 1978, 2833
SchI GAGTC 4 cut(s) 630, 988, 1599, 2346
ScrFI CCNGG 2 cut(s) 413, 2583
SduI GDGCHC 2 cut(s) 614, 2493
SfaNI GCATC 3 cut(s) 373, 444, 1736
SfcI CTRYAG 2 cut(s) 1517, 1658
SinI GGWCC 2 cut(s) 1978, 2833
SmiMI CAYNNNNRTG 2 cut(s) 683, 2747
SmlI CTYRAG 2 cut(s) 1072, 2774
SmoI CTYRAG 2 cut(s) 1072, 2774
SphI GCATGC 1 cut(s) 2793
SseBI AGGCCT 1 cut(s) 777
SsiI CCGC 7 cut(s) 10, 25, 332, 361, 737, 912, 2021
SspI AATATT 3 cut(s) 1143, 1261, 2212
SspMI CTAG 4 cut(s) 191, 518, 629, 1472
StuI AGGCCT 1 cut(s) 777
StyD4I CCNGG 2 cut(s) 411, 2581
StyI CCWWGG 5 cut(s) 555, 588, 1006, 1734, 2807
TaaI ACNGT 4 cut(s) 107, 259, 616, 1927
TaiI ACGT 3 cut(s) 160, 726, 1156
TaqI TCGA 6 cut(s) 355, 810, 954, 1290, 2526, 2694
TauI GCSGC 1 cut(s) 364
TscAI CASTG 5 cut(s) 498, 685, 1827, 1930, 2282
TseFI GTSAC 2 cut(s) 158, 489
TseI GCWGC 8 cut(s) 272, 943, 1135, 1448, 1660, 2161, 2426, 2636
Tsp45I GTSAC 2 cut(s) 158, 489
TspGWI ACGGA 5 cut(s) 305, 1896, 2105, 2663, 2873
TspRI CASTG 5 cut(s) 498, 685, 1827, 1930, 2282
Van91I CCANNNNNTGG 1 cut(s) 1262
Vha464I CTTAAG 1 cut(s) 2774
VpaK11BI GGWCC 2 cut(s) 1978, 2833
VspI ATTAAT 2 cut(s) 18, 1814
XapI RAATTY 5 cut(s) 471, 821, 906, 925, 2725
XbaI TCTAGA 1 cut(s) 1471
XceI RCATGY 5 cut(s) 166, 388, 1674, 2079, 2793
XcmI CCANNNNNNNNNTGG 1 cut(s) 2014
XmiI GTMKAC 1 cut(s) 1929
XmnI GAANNNNTTC 1 cut(s) 725
XspI CTAG 4 cut(s) 191, 518, 629, 1472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.