RLG00000013479
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
32163232 .. 32166799
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013479

Sequence Viewer

Length: 2742 bp
ATGTTGGAGGGGGGAATTCCAGTCAACCTGACCTTGTGTGCGGAACTGAGCATCGTAAGTATTGGACAAAACCGCCTTACCGGCAAAATTCCCTCAGAGATTGGGTCATTGAGGAAGCTTGTGAATCTCAATCTATCGGAAAACAGTCTGACGGGACCCATCCCACCTTCCTTGGGAAATCTTTCATCAATCACACAACTGGCCTTCTCATTTAACAATTTGGTGGGAACAATTCCAGAGGAGATAGGCCGATTGAGAAGCTTATCATTTTTTGCAATTGGTCTCAATAATCTCTCTGGTATGATCCCTCCCTCCCTTTTTAACATATCATCTATGAACGTCTTCTCAGTTACGGCTAATAAGTTTAAGGGCAGTATTCCACTTGGTATAGGCTTAAACATGCCTAATCTCCGATTACTGCATCTTGGTGGAAATGAATTCTCTGGACAAATCCCAGCTTCACTTCCCAATGCTTCTCAATTTCAGAAGCTTGATGCTGCGAAAAATAATTTTGTTGGGCAAGTTCCAGCAAGTTTTGGAAATTTTCCTAGTCTCCAGGTGCTCAGCTTATTCCACAATAATCTAGGAAGTAATTCATCAAATGATTTGGGATTTATAACATTCTTGACAAATTGCAGCAATCTGGAGATCCTTACTCTGACTAATAACAAATTTGGAGGTGTTTTACCTAACTCTGTAGCCAATTTCTCAACCCAACTGACTCAACTCTACCTTGGGGGCAATCCAATAGTGGGAACGATTCCTGAAACATTAGGAAATCTCAACAATTTAATACACTTGAGCCTGGACGTAAACTTGCTCACAGGTATCATTCCAGCTTCTTTTGGGAAGTTACAAAAACTGCAAAGATTATATTTAAATGCTAATAGATTATCAGGACGGATCCCATCTTCTCTTGGAAACCTCACCCAATTGGTTGTACTCTATTTATCAGAAAATGAATTAGAAGGAAACATTCATCCAAATATTGGTAACTGCAAAAATCTGCAGGTGATGAATATATCACACAATAAGCTTAGTGGAGATATACCATCAGAGGTCATTGGTCTATCCTCCTTTGTCTTGCTCAACTTATCGCAAAACTCGCTAACAGGCATTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTGGACATCTCTGAAAATAATTTGACTGGAGGAATTCCAGAAATTATAGGAGGTTGTCAGAGCCTTGAATTTCTTTACCTACAGGGGAACCACTTTCAAGGAATCATACCTTCTTCTTTGGCTACTTTGAGAGGTCTTCAATATCTAAATCTGTCACGAAACAACTTTTCCGGACTTATTCCAAAAGACCTACAGAGGCTTCCATTCTTGATCTATTTGAACCTTTCGTATAATAACCTGGAGGGTGAGGTACCGAAAGAAGGAGTTTTTCGATACACAAGTGCAATGTCATTGGATGGAAATAGCAAACTTTGTGGTGGTGTTTCGGAATTGCAGCTACCAGCATGCCCCATCAAAGTACCAAAGCAGAGAAAGTTGCCTGGTTTCAAAGTAAAGTTCACAATTTCTGTAGTTGCTGGATGCTCTCTTCTATTTGCAGTGATCATAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAATAAACCGCTATCTGCAGTGTCATCAATCAAATTCCTTCCAAAGGTTTCATACCGGACACTTCATCAAGCTACTGGCGGATTCTCTCTGAGCAATCAAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGTATTATTGATCAAGAAGAAAACAAGGTTGTTGCCATAAAGGTCCTCAACCTTCAACAAAAAGGAGCTTCCAAGAGTTTCGTGGCAGAATGCAATGCACTGAGAAATATCCAGCACAGGAACCTTGTGAAGATCTTAACATGTTGCTCCAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTACATCTCAAATGGAAGTTTACAGGAGTGGCTACATAGAGAAAACCAATCAAGGAGTTTGAACCTTCTTCAAAGACTGAATATTGCTGTTGATGTGGCTTCTGTGTTGTGTTATCTTCATGACCATTGTGAACCACAAGTCATTCATTGTGACATGAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTCGCTCGTGTTGGTGATTTTGGGTTAGCAAGACTCATCTCAATGACCACGAACTCCTCTCAAAATCAAAGTAGCACAGTTGGGATAAAGGGAACAATTGGCTATGCTGCTCCAGAGTATGCGAGTGGTGTTGAGCCATCAAGAGAAGGGGATGTATATAGTTATGGGGTGCTTGTGTTGGAAATGTTCACAGGAAGAAGACCTATTGACAAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAAGATGGCCATACCAGGAAGAGTGATGCAAATTGTAGATCCAACTCTTCTTACCGCTTTAGAAGAGATAGCACCTGCAACATCACAAAATGTAGTGAACTACACCAAAGGTTACAATAATGAAATCAAAGCAGTTGAAGAAAACATTGACAATGAGAATTTAAGCAAGATGAACACTTATGTGTGGAAGTACATACTTCCAACCTTTAAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATCGAATGTCTATGAAGGAGGTCCACAGGAAGCTACACTATATAAAAGATGCTTACACTGGTGTTGACATTTGTCAAGAAAGCCCAAGAAAAAGTTGA

Protein Analysis

914

Amino Acids

99.73

Weight (kDa)

8.86

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 239 - 298 4.8e-10 Leucine rich repeat
LRR_14 PF23598 257 - 344 2.2e-07 Leucine-rich repeat region
LRR_14 PF23598 326 - 466 1.7e-08 Leucine-rich repeat region
LRR_8 PF13855 363 - 418 3.5e-07 Leucine rich repeat
LRR_8 PF13855 407 - 466 7.8e-10 Leucine rich repeat
Pkinase PF00069 574 - 794 7.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 575 - 791 2.9e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AarI CACCTGC 2 cut(s) 1000, 2482
Acc36I ACCTGC 2 cut(s) 1000, 2482
Acc65I GGTACC 1 cut(s) 1408
AccB1I GGYRCC 1 cut(s) 1408
AccB7I CCANNNNNTGG 1 cut(s) 989
AccI GTMKAC 1 cut(s) 1761
AccIII TCCGGA 1 cut(s) 1328
AciI CCGC 6 cut(s) 41, 73, 1643, 1713, 1746, 2454
AclWI GGATC 6 cut(s) 298, 643, 898, 911, 1747, 2432
AcoI YGGCCR 1 cut(s) 2406
AcsI RAATTY 9 cut(s) 15, 87, 437, 541, 671, 1191, 1226, 1667, 2557
AcuI CTGAAG 1 cut(s) 1163
AfaI GTAC 5 cut(s) 942, 1410, 1518, 1964, 2591
AfiI CCNNNNNNNGG 5 cut(s) 173, 752, 989, 1418, 1678
AflIII ACRYGT 1 cut(s) 1907
AjnI CCWGG 5 cut(s) 555, 804, 1395, 1537, 2413
AleI CACNNNNGTG 1 cut(s) 2579
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 2 cut(s) 287, 557
AlwI GGATC 6 cut(s) 298, 643, 898, 911, 1747, 2432
Aor13HI TCCGGA 1 cut(s) 1328
AoxI GGCC 3 cut(s) 201, 247, 2406
ApeKI GCWGC 4 cut(s) 497, 636, 1492, 2258
ApoI RAATTY 9 cut(s) 15, 87, 437, 541, 671, 1191, 1226, 1667, 2557
Asp700I GAANNNNTTC 3 cut(s) 181, 341, 592
Asp718I GGTACC 1 cut(s) 1408
AspS9I GGNCC 3 cut(s) 155, 1810, 2665
AsuHPI GGTGA 5 cut(s) 919, 1024, 1415, 2177, 2628
AvaII GGWCC 3 cut(s) 155, 1810, 2665
BaeI ACNNNNGTAYC 2 cut(s) 1423, 1456
BalI TGGCCA 1 cut(s) 2408
BamHI GGATCC 1 cut(s) 903
BanI GGYRCC 1 cut(s) 1408
BauI CACGAG 1 cut(s) 2157
BbsI GAAGAC 3 cut(s) 334, 1286, 2356
Bbv12I GWGCWC 1 cut(s) 564
BbvI GCAGC 4 cut(s) 484, 648, 1504, 2245
BccI CCATC 7 cut(s) 167, 916, 1060, 1448, 1517, 2296, 2398
BceAI ACGGC 1 cut(s) 369
BciT130I CCWGG 5 cut(s) 557, 806, 1397, 1539, 2415
BclI TGATCA 2 cut(s) 1599, 1777
BcoDI GTCTC 2 cut(s) 287, 557
BfaI CTAG 3 cut(s) 549, 584, 1952
BfmI CTRYAG 6 cut(s) 696, 1007, 1238, 1349, 1566, 1650
BfuAI ACCTGC 2 cut(s) 1000, 2482
BglI GCCNNNNNGGC 1 cut(s) 81
BglII AGATCT 1 cut(s) 1899
BisI GCNGC 4 cut(s) 498, 637, 1493, 2259
BlpI GCTNAGC 1 cut(s) 563
BlsI GCNGC 4 cut(s) 499, 638, 1494, 2260
Bme1390I CCNGG 5 cut(s) 557, 806, 1397, 1539, 2415
Bme18I GGWCC 3 cut(s) 155, 1810, 2665
BmgT120I GGNCC 3 cut(s) 155, 1810, 2665
BmiI GGNNCC 6 cut(s) 156, 157, 905, 1247, 1410, 1889
BmrFI CCNGG 5 cut(s) 557, 806, 1397, 1539, 2415
BmsI GCATC 6 cut(s) 60, 430, 484, 1568, 2415, 2683
BoxI GACNNNNGTC 1 cut(s) 2715
BpiI GAAGAC 3 cut(s) 334, 1286, 2356
BplI GAGNNNNNCTC 4 cut(s) 1612, 1644, 1952, 1984
BpmI CTGGAG 6 cut(s) 539, 665, 1206, 1418, 1900, 2247
Bpu1102I GCTNAGC 1 cut(s) 563
BpuEI CTTGAG 1 cut(s) 820
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 3 cut(s) 171, 733, 2639
BsaWI WCCGGW 2 cut(s) 1328, 1689
Bsc4I CCNNNNNNNGG 5 cut(s) 173, 752, 989, 1418, 1678
Bse118I RCCGGY 1 cut(s) 80
Bse1I ACTGG 6 cut(s) 20, 204, 1164, 1189, 1714, 2707
Bse3DI GCAATG 3 cut(s) 1449, 1867, 2134
BseAI TCCGGA 1 cut(s) 1328
BseBI CCWGG 5 cut(s) 557, 806, 1397, 1539, 2415
BseDI CCNNGG 3 cut(s) 171, 733, 2639
BseGI GGATG 5 cut(s) 159, 979, 1459, 1583, 2308
BseLI CCNNNNNNNGG 5 cut(s) 173, 752, 989, 1418, 1678
BseMI GCAATG 3 cut(s) 1449, 1867, 2134
BseMII CTCAG 6 cut(s) 38, 108, 360, 577, 1715, 1859
BseNI ACTGG 6 cut(s) 20, 204, 1164, 1189, 1714, 2707
BseRI GAGGAG 3 cut(s) 254, 1633, 2197
BseXI GCAGC 4 cut(s) 484, 648, 1504, 2245
BseYI CCCAGC 1 cut(s) 454
BshFI GGCC 3 cut(s) 203, 249, 2408
BshNI GGYRCC 1 cut(s) 1408
BsiHKAI GWGCWC 1 cut(s) 564
BsiSI CCGG 3 cut(s) 81, 1329, 1690
BslFI GGGAC 1 cut(s) 168
BslI CCNNNNNNNGG 5 cut(s) 173, 752, 989, 1418, 1678
BsmAI GTCTC 2 cut(s) 287, 557
BsmFI GGGAC 1 cut(s) 168
BsmI GAATGC 2 cut(s) 1116, 1862
BsnI GGCC 3 cut(s) 203, 249, 2408
Bso31I GGTCTC 1 cut(s) 287
Bsp1286I GDGCHC 1 cut(s) 564
Bsp13I TCCGGA 1 cut(s) 1328
Bsp143I GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
Bsp1720I GCTNAGC 1 cut(s) 563
BspACI CCGC 6 cut(s) 41, 73, 1643, 1713, 1746, 2454
BspANI GGCC 3 cut(s) 203, 249, 2408
BspCNI CTCAG 6 cut(s) 39, 107, 359, 576, 1716, 1860
BspEI TCCGGA 1 cut(s) 1328
BspHI TCATGA 1 cut(s) 2080
BspLI GGNNCC 6 cut(s) 156, 157, 905, 1247, 1410, 1889
BspMAI CTGCAG 2 cut(s) 1011, 1654
BspMI ACCTGC 2 cut(s) 1000, 2482
BspPI GGATC 6 cut(s) 298, 643, 898, 911, 1747, 2432
BspT107I GGYRCC 1 cut(s) 1408
BspTNI GGTCTC 1 cut(s) 287
BsrDI GCAATG 3 cut(s) 1449, 1867, 2134
BsrFI RCCGGY 1 cut(s) 80
BsrI ACTGG 6 cut(s) 20, 204, 1164, 1189, 1714, 2707
BssAI RCCGGY 1 cut(s) 80
BssECI CCNNGG 3 cut(s) 171, 733, 2639
BssMI GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
BssNAI GTATAC 1 cut(s) 1762
BssSI CACGAG 1 cut(s) 2157
BssT1I CCWWGG 3 cut(s) 171, 733, 2639
Bst1107I GTATAC 1 cut(s) 1762
Bst2BI CACGAG 1 cut(s) 2157
Bst2UI CCWGG 5 cut(s) 557, 806, 1397, 1539, 2415
Bst4CI ACNGT 2 cut(s) 146, 2230
Bst6I CTCTTC 4 cut(s) 1590, 2413, 2451, 2457
BstC8I GCNNGC 2 cut(s) 1504, 2623
BstDEI CTNAG 7 cut(s) 47, 94, 346, 563, 1037, 1724, 1868
BstENI CCTNNNNNAGG 1 cut(s) 1676
BstF5I GGATG 5 cut(s) 159, 979, 1459, 1583, 2308
BstKTI GATC 9 cut(s) 306, 651, 906, 1371, 1602, 1742, 1780, 1902, 2440
BstMAI GTCTC 2 cut(s) 287, 557
BstMBI GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
BstMWI GCNNNNNNNGC 3 cut(s) 81, 1105, 1752
BstNI CCWGG 5 cut(s) 557, 806, 1397, 1539, 2415
BstNSI RCATGY 4 cut(s) 403, 1506, 1911, 2625
BstPAI GACNNNNGTC 1 cut(s) 2715
BstSCI CCNGG 5 cut(s) 555, 804, 1395, 1537, 2413
BstSFI CTRYAG 6 cut(s) 696, 1007, 1238, 1349, 1566, 1650
BstV1I GCAGC 4 cut(s) 484, 648, 1504, 2245
BstV2I GAAGAC 3 cut(s) 334, 1286, 2356
BstX2I RGATCY 4 cut(s) 648, 903, 1899, 2437
BstYI RGATCY 4 cut(s) 648, 903, 1899, 2437
BstZ17I GTATAC 1 cut(s) 1762
BsuRI GGCC 3 cut(s) 203, 249, 2408
BtsCI GGATG 5 cut(s) 159, 979, 1459, 1583, 2308
BtsI GCAGTG 2 cut(s) 1602, 1659
BtsIMutI CAGTG 5 cut(s) 1157, 1602, 1659, 1865, 2700
BveI ACCTGC 2 cut(s) 1000, 2482
Cac8I GCNNGC 2 cut(s) 1504, 2623
CciI TCATGA 1 cut(s) 2080
Cfr10I RCCGGY 1 cut(s) 80
Cfr13I GGNCC 3 cut(s) 155, 1810, 2665
Csp6I GTAC 5 cut(s) 941, 1409, 1517, 1963, 2590
CspCI CAANNNNNGTGG 4 cut(s) 153, 188, 1453, 1488
CviAII CATG 7 cut(s) 400, 1503, 1908, 2081, 2116, 2149, 2622
CviQI GTAC 5 cut(s) 941, 1409, 1517, 1963, 2590
DdeI CTNAG 7 cut(s) 47, 94, 346, 563, 1037, 1724, 1868
DpnI GATC 9 cut(s) 305, 650, 905, 1370, 1601, 1741, 1779, 1901, 2439
DpnII GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
DraI TTTAAA 2 cut(s) 879, 2371
EaeI YGGCCR 1 cut(s) 2406
Eam1104I CTCTTC 4 cut(s) 1590, 2413, 2451, 2457
EarI CTCTTC 4 cut(s) 1590, 2413, 2451, 2457
EciI GGCGGA 1 cut(s) 1728
Eco130I CCWWGG 3 cut(s) 171, 733, 2639
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 3 cut(s) 155, 1810, 2665
Eco57I CTGAAG 1 cut(s) 1163
EcoNI CCTNNNNNAGG 1 cut(s) 1676
EcoO109I RGGNCCY 2 cut(s) 155, 1810
EcoRI GAATTC 3 cut(s) 15, 437, 1191
EcoRII CCWGG 5 cut(s) 555, 804, 1395, 1537, 2413
EcoT14I CCWWGG 3 cut(s) 171, 733, 2639
ErhI CCWWGG 3 cut(s) 171, 733, 2639
FaeI CATG 7 cut(s) 403, 1506, 1911, 2084, 2119, 2152, 2625
FaqI GGGAC 1 cut(s) 168
FatI CATG 7 cut(s) 399, 1502, 1907, 2080, 2115, 2148, 2621
FbaI TGATCA 2 cut(s) 1599, 1777
FblI GTMKAC 1 cut(s) 1761
Fnu4HI GCNGC 4 cut(s) 498, 637, 1493, 2259
FokI GGATG 5 cut(s) 146, 966, 1466, 1590, 2315
Fsp4HI GCNGC 4 cut(s) 498, 637, 1493, 2259
FspBI CTAG 3 cut(s) 549, 584, 1952
GluI GCNGC 4 cut(s) 498, 637, 1493, 2259
GsaI CCCAGC 1 cut(s) 458
GsuI CTGGAG 6 cut(s) 539, 665, 1206, 1418, 1900, 2247
HaeIII GGCC 3 cut(s) 203, 249, 2408
HapII CCGG 3 cut(s) 81, 1329, 1690
Hin1II CATG 7 cut(s) 403, 1506, 1911, 2084, 2119, 2152, 2625
HincII GTYRAC 2 cut(s) 25, 2710
HindII GTYRAC 2 cut(s) 25, 2710
HindIII AAGCTT 4 cut(s) 116, 259, 488, 1034
HinfI GANTC 8 cut(s) 124, 721, 760, 1260, 1716, 2184, 2633, 2644
HpaII CCGG 3 cut(s) 81, 1329, 1690
HphI GGTGA 5 cut(s) 919, 1024, 1415, 2177, 2628
HpyCH4III ACNGT 2 cut(s) 146, 2230
HpyCH4IV ACGT 2 cut(s) 339, 810
HpyF10VI GCNNNNNNNGC 3 cut(s) 81, 1105, 1752
HpyF3I CTNAG 7 cut(s) 47, 94, 346, 563, 1037, 1724, 1868
HpySE526I ACGT 2 cut(s) 339, 810
Hsp92II CATG 7 cut(s) 403, 1506, 1911, 2084, 2119, 2152, 2625
KflI GGGWCCC 1 cut(s) 155
Kpn2I TCCGGA 1 cut(s) 1328
KpnI GGTACC 1 cut(s) 1412
Ksp22I TGATCA 2 cut(s) 1599, 1777
Kzo9I GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
LmnI GCTCC 3 cut(s) 1832, 1919, 2266
Lsp1109I GCAGC 4 cut(s) 484, 648, 1504, 2245
LweI GCATC 6 cut(s) 60, 430, 484, 1568, 2415, 2683
MaeI CTAG 3 cut(s) 549, 584, 1952
MaeII ACGT 2 cut(s) 339, 810
MaeIII GTNAC 6 cut(s) 349, 852, 992, 1311, 2111, 2510
MalI GATC 9 cut(s) 305, 650, 905, 1370, 1601, 1741, 1779, 1901, 2439
MboI GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
MfeI CAATTG 3 cut(s) 276, 932, 2247
MflI RGATCY 4 cut(s) 648, 903, 1899, 2437
MhlI GDGCHC 1 cut(s) 564
MlsI TGGCCA 1 cut(s) 2408
MluNI TGGCCA 1 cut(s) 2408
MlyI GAGTC 2 cut(s) 715, 2178
MmeI TCCRAC 3 cut(s) 2310, 2465, 2624
Mox20I TGGCCA 1 cut(s) 2408
MroI TCCGGA 1 cut(s) 1328
MroXI GAANNNNTTC 3 cut(s) 181, 341, 592
MscI TGGCCA 1 cut(s) 2408
MslI CAYNNNNRTG 3 cut(s) 426, 2192, 2579
Msp20I TGGCCA 1 cut(s) 2408
MspI CCGG 3 cut(s) 81, 1329, 1690
MspR9I CCNGG 5 cut(s) 557, 806, 1397, 1539, 2415
MunI CAATTG 3 cut(s) 276, 932, 2247
Mva1269I GAATGC 2 cut(s) 1116, 1862
MvaI CCWGG 5 cut(s) 557, 806, 1397, 1539, 2415
MwoI GCNNNNNNNGC 3 cut(s) 81, 1105, 1752
NdeII GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
NlaIII CATG 7 cut(s) 403, 1506, 1911, 2084, 2119, 2152, 2625
NlaIV GGNNCC 6 cut(s) 156, 157, 905, 1247, 1410, 1889
NmeAIII GCCGAG 1 cut(s) 2148
NmuCI GTSAC 2 cut(s) 1311, 2111
NspI RCATGY 4 cut(s) 403, 1506, 1911, 2625
OliI CACNNNNGTG 1 cut(s) 2579
PaeI GCATGC 2 cut(s) 1506, 2625
PagI TCATGA 1 cut(s) 2080
PaqCI CACCTGC 2 cut(s) 1000, 2482
PciI ACATGT 1 cut(s) 1907
PctI GAATGC 2 cut(s) 1116, 1862
PdmI GAANNNNTTC 3 cut(s) 181, 341, 592
PfeI GAWTC 6 cut(s) 124, 760, 1260, 1716, 2633, 2644
PflFI GACNNNGTC 1 cut(s) 2150
PflMI CCANNNNNTGG 1 cut(s) 989
PkrI GCNGC 4 cut(s) 499, 638, 1494, 2260
PleI GAGTC 2 cut(s) 715, 2178
PpsI GAGTC 2 cut(s) 715, 2178
PpuMI RGGWCCY 2 cut(s) 155, 1810
PscI ACATGT 1 cut(s) 1907
PshAI GACNNNNGTC 1 cut(s) 2715
PsiI TTATAA 1 cut(s) 617
Psp5II RGGWCCY 2 cut(s) 155, 1810
Psp6I CCWGG 5 cut(s) 555, 804, 1395, 1537, 2413
PspFI CCCAGC 1 cut(s) 454
PspGI CCWGG 5 cut(s) 555, 804, 1395, 1537, 2413
PspN4I GGNNCC 6 cut(s) 156, 157, 905, 1247, 1410, 1889
PspPI GGNCC 3 cut(s) 155, 1810, 2665
PspPPI RGGWCCY 2 cut(s) 155, 1810
PstI CTGCAG 2 cut(s) 1011, 1654
PsuI RGATCY 4 cut(s) 648, 903, 1899, 2437
PsyI GACNNNGTC 1 cut(s) 2150
RsaI GTAC 5 cut(s) 942, 1410, 1518, 1964, 2591
RsaNI GTAC 5 cut(s) 941, 1409, 1517, 1963, 2590
RseI CAYNNNNRTG 3 cut(s) 426, 2192, 2579
SatI GCNGC 4 cut(s) 498, 637, 1493, 2259
Sau3AI GATC 9 cut(s) 303, 648, 903, 1368, 1599, 1739, 1777, 1899, 2437
Sau96I GGNCC 3 cut(s) 155, 1810, 2665
SchI GAGTC 2 cut(s) 715, 2178
ScrFI CCNGG 5 cut(s) 557, 806, 1397, 1539, 2415
SduI GDGCHC 1 cut(s) 564
SfaNI GCATC 6 cut(s) 60, 430, 484, 1568, 2415, 2683
SfcI CTRYAG 6 cut(s) 696, 1007, 1238, 1349, 1566, 1650
SinI GGWCC 3 cut(s) 155, 1810, 2665
SmiI ATTTAAAT 1 cut(s) 879
SmiMI CAYNNNNRTG 3 cut(s) 426, 2192, 2579
SmlI CTYRAG 1 cut(s) 799
SmoI CTYRAG 1 cut(s) 799
SphI GCATGC 2 cut(s) 1506, 2625
SsiI CCGC 6 cut(s) 41, 73, 1643, 1713, 1746, 2454
SspI AATATT 2 cut(s) 988, 2044
SspMI CTAG 3 cut(s) 549, 584, 1952
StyD4I CCNGG 5 cut(s) 555, 804, 1395, 1537, 2413
StyI CCWWGG 3 cut(s) 171, 733, 2639
SwaI ATTTAAAT 1 cut(s) 879
TaaI ACNGT 2 cut(s) 146, 2230
TaiI ACGT 2 cut(s) 342, 813
TaqI TCGA 2 cut(s) 1429, 2647
TatI WGTACW 3 cut(s) 940, 1962, 2589
TfiI GAWTC 6 cut(s) 124, 760, 1260, 1716, 2633, 2644
TscAI CASTG 5 cut(s) 1164, 1602, 1659, 1872, 2707
TseFI GTSAC 2 cut(s) 1311, 2111
TseI GCWGC 4 cut(s) 497, 636, 1492, 2258
Tsp45I GTSAC 2 cut(s) 1311, 2111
TspGWI ACGGA 1 cut(s) 916
TspRI CASTG 5 cut(s) 1164, 1602, 1659, 1872, 2707
Tth111I GACNNNGTC 1 cut(s) 2150
Van91I CCANNNNNTGG 1 cut(s) 989
VpaK11BI GGWCC 3 cut(s) 155, 1810, 2665
XagI CCTNNNNNAGG 1 cut(s) 1676
XapI RAATTY 9 cut(s) 15, 87, 437, 541, 671, 1191, 1226, 1667, 2557
XceI RCATGY 4 cut(s) 403, 1506, 1911, 2625
XcmI CCANNNNNNNNNTGG 1 cut(s) 1846
XmiI GTMKAC 1 cut(s) 1761
XmnI GAANNNNTTC 3 cut(s) 181, 341, 592
XspI CTAG 3 cut(s) 549, 584, 1952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.