Rw1G012990
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
28917667 .. 28921291
3625 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G012990.1

Sequence Viewer

Length: 3141 bp
ATGGAGAGTTTCACATACCTTCATGTCCTGACCCTTCTCCTGTTCATCAACTTTTCACAACCTACCACCGTTGTAAGTTCATTTGGCAATGAAACCGATCGCTTGGCTTTGCTAAAATTCAAAGACTGCATAGCTTCTGATCCACATGGGCTGTTGAACTCATGGAATGACTCCGTTCAATACTGCAAATGGCTTGGAATTACTTGTGGCAAACAACATCAAAGAGTAACAGCCTTGTACCTACCACACGCTGTTTTGCACGGAACCATATCACCATACATTGGCAACCTCTCCTTCCTCAGGGACTTCAGCCTTTACAACAACAGCTTCTCTGGTAAGATTCCGCAACAAATGTTCAACTTATTCCGACTGCGACGTCTCAGTCTCAGTACCAACATGTTGGAGGGGAGAATTCCAATCAACCTGACCTTGTGCGCAGAACTGAGCTACTTAAATATTGGAGAAAACCGCTTTACCGGCAAAATTCCTTCAGAGATCGGGTCATTGAGGAAGCTTGTGCATCTCACTCTAGAAGAAAACAATCTGACAGGAGCCATCCCACCTTCCTTGGGGAATCTTTCATCACTCACTGGACTTTTTTTGGGATGGAACAATTTGGTGGGCACCATTCCAGAGGTGCTAGGCCGATTGAGAAGCTTATCACTTTTTGCAGTTGGTCTCAATAATCTCTCTGGTTTGATCCCTCCCTCCCTTTTTAACATATCATCTGTGAACGGCATCTCACTTACGGGTAATATGTTTAAGGGCAGTATTCCGCCTGGTATAGGCCTAAACATGCCTAATCTCCAGATATTGTTCCTCTCCGAAAATGACTTCTTTGGAGAAATCCCTGCTTCACTTTCCAATGCTTCTCAGCTTCATTCGCTTGATTTTGGGCACAATAATTTTGTTGGTCAACTTCCCGCAAGTTTTGGAAATTTTCCTAATCTCCAGCAGCTCAACTTTGAGGTCAATAATCTAGGAAGTAATTCATCAAATGATTTGGGATTTATATCATTGTTGACAAATTGCAGCAATCTGGAGATGTTTTCTCTGAGTTATAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAATTTCTCAACTCAACTGACTGAACTCTACCTTGGAGGTAATCAAATAGTGGGAACGATTCCTAAAGCATTAGGAAATCTCAACAGTTTAATACACTTGAGCCTGGAACATAACTTGTTCACAGGTATCATTCCAGCTTCTTTTGGGAAGTTGCAAAAATTGCAAAGATTATTTTTAAATTCCAATAGATTATCAGGACGGATCCCATCTTCTCTTGGAAACCTCACCCAATTGTTTCTACTCTACTTATTAGAAAATGAATTAGAAGGAAGCATTCCTCCAAATATTGGTAACTACCAAAATCTGGAGGTGATGGATATATCACACAATAAGCTTAGTGGAGAAATACCATCACAGGTCATAGGCCTGTCCTCCTTCTCTATCAAGCTCAATTTATCACAAAACTCGCTAACAGGTACTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTCGATATCTCTGATAATAATTTGACCGGAGGAATTCCAGAAATTATTGGAGACTGTCTGAGCCTTGAATTTCTTTACCTCCAAGGGAACCACTTTCAAGGAATCATACCTTCTTCCTTGGCTGCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGAAACAACTTGTCAGGACATATTCCAAAAGACCTACAGAGACTTCCATTCTTGATCCATTTGAACCTTTCGTTCAATAATCTAGAGGGTGAGGTACCGAAAGATAGAGTTTTTCGAAACACAAGTGCAATATCATTGGATGGAAATACCAAACTTTGTGGAGGTGTTTCAGAATTGCAGCTACCAGCATGTCCCATTAAAGTACCAAAGCAAAGAAAGTGGCATGGTTTCAAACTAAAGTTCACAATTTCCTTGGTCTCTGGATGCTCTCTTCTATCTGCAGTCGTCTTAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAAGAAACCATTAATAGCAGTGTCATCAATTAACTTCCTTCCAAAGGTTTCATACCAGACGCTTCATCATGCTACTTCCGGATTCTCTCCGAGCAATCAAATTGGATCAGGTGGTTTTGGCTCTGTATACAAAGGGATTCTTAAACAAGAAGAAAACAATGTTGTTGCCATCAAGGTCCTCAACCTTCAACAGAAAGGTGCTTCCAAGAGTTTTGTGGTTGAATGCAATGCACTAAGAAATATCCAGCACAGGAACCTTGTGAAGATCTTGACATGTTGCTCTAGCATTGACTACAATGGTAATGACTTCAAAGCTCTAGTCTTTGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCATAGAGAAAATCAATCAAGAAGTTTGAACCTTCTTCAAAGACTGAATATTGCTGTTGATTTGGCTTCTGCATTGTATTATCTTCATGACCATTGTGAACCACATATCATTCATTGTGATGTGAAGCCGAGCAATGTTCTTCTTGATAATGACATGGTTGCTCGTGTTGGTGATTTTGGGTTGGCAAGACTCATCTCAACAACCACGGACTCCTATCAAAATCAAAGTAGCACGGTTGGAATAAAGGGAACCATTGGCTATGCTGCTCCAGAGTATGCAAGTGGTGTTGAGCCATCAAGACAAGGGGATGTATATAGTTACGGGGTGCTCATGTTGCAATTGTTCACAGGAAGAAGACCTGTCGACAAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAAGATGGCCATACCAGGAAGAGTGATGCAGATTATAGATCCTACTCTTCTTGCCACTTTAGAAGAGACAACACCTGCAACATCACAAAATGTAGTGAACTACATCAATGGTTACAATAATGAAATCGAAGCAGTTGAAGAAGACATTGACAATGAGAATTTAAGGAAGATGAGCACTTATGTGTGGAAGTGCATACTTCCAACCCTTAAGATTGGACTTGCATGCACGGAAGAATCACCAAGGAATAGAATGTCTATGGAAGAGGTCCACAGGAAGCTACACCATATAAAAGATGCTTACTCTGATGTTGACATCTATCAAGAAAGACCAAGAAGAAGCTGA

Protein Analysis

1046

Amino Acids

115.72

Weight (kDa)

8.03

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 1.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 147 - 221 5.8e-06 Leucine-rich repeat region
LRR_8 PF13855 371 - 430 4.3e-11 Leucine rich repeat
LRR_8 PF13855 398 - 454 8.1e-06 Leucine rich repeat
LRR_14 PF23598 497 - 601 1.8e-07 Leucine-rich repeat region
LRR_8 PF13855 541 - 599 1.2e-08 Leucine rich repeat
Pkinase PF00069 709 - 932 2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 710 - 924 2.9e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1062
AarI CACCTGC 1 cut(s) 2881
AasI GACNNNNNNGTC 2 cut(s) 375, 381
AatII GACGTC 1 cut(s) 379
Acc16I TGCGCA 1 cut(s) 436
Acc36I ACCTGC 1 cut(s) 2881
Acc65I GGTACC 1 cut(s) 1807
AccB1I GGYRCC 2 cut(s) 623, 1807
AccB7I CCANNNNNTGG 3 cut(s) 281, 1385, 1402
AccI GTMKAC 2 cut(s) 2160, 2757
AccIII TCCGGA 1 cut(s) 2111
AciI CCGC 4 cut(s) 344, 469, 776, 924
AclWI GGATC 7 cut(s) 134, 694, 1294, 1307, 1762, 2146, 2831
AcoI YGGCCR 1 cut(s) 2805
AcsI RAATTY 8 cut(s) 116, 411, 483, 937, 1276, 1590, 1625, 2956
AcuI CTGAAG 4 cut(s) 292, 474, 1562, 1679
AcyI GRCGYC 1 cut(s) 376
AfaI GTAC 5 cut(s) 239, 391, 1516, 1809, 1917
AfiI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
AflII CTTAAG 1 cut(s) 3005
AflIII ACRYGT 2 cut(s) 396, 2306
AjnI CCWGG 3 cut(s) 778, 1200, 2812
AjuI GAANNNNNNNTTGG 2 cut(s) 1113, 1145
AleI CACNNNNGTG 1 cut(s) 2978
Alw21I GWGCWC 2 cut(s) 2724, 2975
Alw26I GTCTC 7 cut(s) 383, 389, 683, 1602, 1747, 1975, 2858
AlwI GGATC 7 cut(s) 134, 694, 1294, 1307, 1762, 2146, 2831
Aor13HI TCCGGA 1 cut(s) 2111
AoxI GGCC 4 cut(s) 643, 787, 1462, 2805
ApeKI GCWGC 6 cut(s) 955, 1032, 1679, 1891, 2392, 2657
ApoI RAATTY 8 cut(s) 116, 411, 483, 937, 1276, 1590, 1625, 2956
ArsI GACNNNNNNTTYG 2 cut(s) 2337, 2369
AseI ATTAAT 1 cut(s) 2045
Asp700I GAANNNNTTC 1 cut(s) 988
Asp718I GGTACC 1 cut(s) 1807
AspLEI GCGC 1 cut(s) 437
AspS9I GGNCC 2 cut(s) 2209, 3064
AsuHPI GGTGA 6 cut(s) 264, 1315, 1420, 1814, 2576, 3027
AsuII TTCGAA 1 cut(s) 1828
AvaII GGWCC 2 cut(s) 2209, 3064
AxyI CCTNAGG 1 cut(s) 299
BaeGI GKGCMC 2 cut(s) 626, 900
BalI TGGCCA 1 cut(s) 2807
BamHI GGATCC 1 cut(s) 1299
BanI GGYRCC 2 cut(s) 623, 1807
BauI CACGAG 1 cut(s) 2556
BbsI GAAGAC 3 cut(s) 1685, 2755, 2946
Bbv12I GWGCWC 2 cut(s) 2724, 2975
BbvI GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
BccI CCATC 9 cut(s) 563, 600, 1312, 1405, 1456, 1847, 2210, 2695, 2797
BceAI ACGGC 1 cut(s) 751
BciT130I CCWGG 3 cut(s) 780, 1202, 2814
BcoDI GTCTC 7 cut(s) 383, 389, 683, 1602, 1747, 1975, 2858
BfaI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
BfmI CTRYAG 3 cut(s) 1092, 1748, 1992
BfrI CTTAAG 1 cut(s) 3005
BfuAI ACCTGC 1 cut(s) 2881
BglII AGATCT 2 cut(s) 1705, 2298
BisI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
BlsI GCNGC 6 cut(s) 957, 1034, 1681, 1893, 2394, 2659
Bme1390I CCNGG 3 cut(s) 780, 1202, 2814
Bme18I GGWCC 2 cut(s) 2209, 3064
BmgT120I GGNCC 2 cut(s) 2209, 3064
BmiI GGNNCC 8 cut(s) 265, 553, 625, 1301, 1646, 1809, 2288, 2644
BmrFI CCNGG 3 cut(s) 780, 1202, 2814
BmsI GCATC 5 cut(s) 529, 747, 1967, 2814, 3082
BpiI GAAGAC 3 cut(s) 1685, 2755, 2946
BplI GAGNNNNNCTC 2 cut(s) 2011, 2043
BpmI CTGGAG 5 cut(s) 791, 935, 1061, 1424, 2646
Bpu14I TTCGAA 1 cut(s) 1828
BpuEI CTTGAG 1 cut(s) 1216
BsaBI GATNNNNATC 1 cut(s) 1012
BsaHI GRCGYC 1 cut(s) 376
BsaI GGTCTC 2 cut(s) 683, 1975
BsaJI CCNNGG 7 cut(s) 567, 1129, 1639, 1674, 1965, 2598, 3038
BsaWI WCCGGW 2 cut(s) 1583, 2111
Bsc4I CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 1 cut(s) 595
Bse21I CCTNAGG 1 cut(s) 299
Bse3DI GCAATG 3 cut(s) 94, 2266, 2533
Bse8I GATNNNNATC 1 cut(s) 1012
BseAI TCCGGA 1 cut(s) 2111
BseBI CCWGG 3 cut(s) 780, 1202, 2814
BseDI CCNNGG 7 cut(s) 567, 1129, 1639, 1674, 1965, 2598, 3038
BseGI GGATG 5 cut(s) 555, 611, 1858, 1982, 2707
BseJI GATNNNNATC 1 cut(s) 1012
BseLI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
BseMI GCAATG 3 cut(s) 94, 2266, 2533
BseMII CTCAG 7 cut(s) 313, 394, 400, 434, 887, 1046, 1607
BseNI ACTGG 1 cut(s) 595
BseRI GAGGAG 2 cut(s) 2032, 2399
BseSI GKGCMC 2 cut(s) 626, 900
BseXI GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
Bsh1285I CGRYCG 1 cut(s) 100
BshFI GGCC 4 cut(s) 645, 789, 1464, 2807
BshNI GGYRCC 2 cut(s) 623, 1807
BsiEI CGRYCG 1 cut(s) 100
BsiHKAI GWGCWC 2 cut(s) 2724, 2975
BsiSI CCGG 3 cut(s) 477, 1584, 2112
BslFI GGGAC 2 cut(s) 317, 1890
BslI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
BsmAI GTCTC 7 cut(s) 383, 389, 683, 1602, 1747, 1975, 2858
BsmBI CGTCTC 1 cut(s) 383
BsmFI GGGAC 2 cut(s) 317, 1890
BsmI GAATGC 2 cut(s) 1371, 2261
BsnI GGCC 4 cut(s) 645, 789, 1464, 2807
Bso31I GGTCTC 2 cut(s) 683, 1975
Bsp119I TTCGAA 1 cut(s) 1828
Bsp1286I GDGCHC 4 cut(s) 626, 900, 2724, 2975
Bsp13I TCCGGA 1 cut(s) 2111
BspACI CCGC 4 cut(s) 344, 469, 776, 924
BspANI GGCC 4 cut(s) 645, 789, 1464, 2807
BspCNI CTCAG 7 cut(s) 312, 393, 399, 435, 886, 1047, 1608
BspEI TCCGGA 1 cut(s) 2111
BspHI TCATGA 1 cut(s) 2479
BspLI GGNNCC 8 cut(s) 265, 553, 625, 1301, 1646, 1809, 2288, 2644
BspMAI CTGCAG 1 cut(s) 1996
BspMI ACCTGC 1 cut(s) 2881
BspPI GGATC 7 cut(s) 134, 694, 1294, 1307, 1762, 2146, 2831
BspT104I TTCGAA 1 cut(s) 1828
BspT107I GGYRCC 2 cut(s) 623, 1807
BspTI CTTAAG 1 cut(s) 3005
BspTNI GGTCTC 2 cut(s) 683, 1975
BsrDI GCAATG 3 cut(s) 94, 2266, 2533
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 1 cut(s) 595
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 7 cut(s) 567, 1129, 1639, 1674, 1965, 2598, 3038
BssNAI GTATAC 1 cut(s) 2161
BssNI GRCGYC 1 cut(s) 376
BssSI CACGAG 1 cut(s) 2556
BssT1I CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 3038
Bst1107I GTATAC 1 cut(s) 2161
Bst2BI CACGAG 1 cut(s) 2556
Bst2UI CCWGG 3 cut(s) 780, 1202, 2814
Bst4CI ACNGT 4 cut(s) 70, 1184, 1613, 2629
Bst6I CTCTTC 5 cut(s) 1989, 2812, 2850, 2856, 3054
BstACI GRCGYC 1 cut(s) 376
BstAFI CTTAAG 1 cut(s) 3005
BstAPI GCANNNNNTGC 1 cut(s) 1258
BstBI TTCGAA 1 cut(s) 1828
BstC8I GCNNGC 1 cut(s) 3022
BstDSI CCRYGG 1 cut(s) 2598
BstENI CCTNNNNNAGG 3 cut(s) 298, 783, 2075
BstF5I GGATG 5 cut(s) 555, 611, 1858, 1982, 2707
BstHHI GCGC 1 cut(s) 437
BstMAI GTCTC 7 cut(s) 383, 389, 683, 1602, 1747, 1975, 2858
BstMCI CGRYCG 1 cut(s) 100
BstMWI GCNNNNNNNGC 4 cut(s) 477, 883, 1258, 2728
BstNI CCWGG 3 cut(s) 780, 1202, 2814
BstNSI RCATGY 5 cut(s) 400, 799, 1905, 2310, 3024
BstSCI CCNGG 3 cut(s) 778, 1200, 2812
BstSFI CTRYAG 3 cut(s) 1092, 1748, 1992
BstSLI GKGCMC 2 cut(s) 626, 900
BstV1I GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
BstV2I GAAGAC 3 cut(s) 1685, 2755, 2946
BstX2I RGATCY 4 cut(s) 1299, 1705, 2298, 2836
BstXI CCANNNNNNTGG 1 cut(s) 400
BstYI RGATCY 4 cut(s) 1299, 1705, 2298, 2836
BstZ17I GTATAC 1 cut(s) 2161
Bsu36I CCTNAGG 1 cut(s) 299
BsuRI GGCC 4 cut(s) 645, 789, 1464, 2807
BtgI CCRYGG 1 cut(s) 2598
BtsCI GGATG 5 cut(s) 555, 611, 1858, 1982, 2707
BtsI GCAGTG 1 cut(s) 2058
BtsIMutI CAGTG 2 cut(s) 588, 2058
BveI ACCTGC 1 cut(s) 2881
Cac8I GCNNGC 1 cut(s) 3022
CciI TCATGA 1 cut(s) 2479
CfoI GCGC 1 cut(s) 437
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 2 cut(s) 2209, 3064
CseI GACGC 1 cut(s) 2101
Csp6I GTAC 5 cut(s) 238, 390, 1515, 1808, 1916
CspCI CAANNNNNGTGG 6 cut(s) 549, 584, 1852, 1887, 1913, 1948
CviQI GTAC 5 cut(s) 238, 390, 1515, 1808, 1916
DraI TTTAAA 2 cut(s) 1275, 2770
DrdI GACNNNNNNGTC 2 cut(s) 375, 381
DseDI GACNNNNNNGTC 2 cut(s) 375, 381
EaeI YGGCCR 1 cut(s) 2805
Eam1104I CTCTTC 5 cut(s) 1989, 2812, 2850, 2856, 3054
EarI CTCTTC 5 cut(s) 1989, 2812, 2850, 2856, 3054
EciI GGCGGA 1 cut(s) 765
Eco130I CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 3038
Eco147I AGGCCT 2 cut(s) 789, 1464
Eco31I GGTCTC 2 cut(s) 683, 1975
Eco32I GATATC 1 cut(s) 1564
Eco47I GGWCC 2 cut(s) 2209, 3064
Eco57I CTGAAG 4 cut(s) 292, 474, 1562, 1679
Eco81I CCTNAGG 1 cut(s) 299
EcoNI CCTNNNNNAGG 3 cut(s) 298, 783, 2075
EcoO109I RGGNCCY 1 cut(s) 2209
EcoRI GAATTC 2 cut(s) 411, 1590
EcoRII CCWGG 3 cut(s) 778, 1200, 2812
EcoRV GATATC 1 cut(s) 1564
EcoT14I CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 3038
ErhI CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 3038
Esp3I CGTCTC 1 cut(s) 383
FalI AAGNNNNNCTT 2 cut(s) 2157, 2189
FaqI GGGAC 2 cut(s) 317, 1890
FauI CCCGC 1 cut(s) 931
FblI GTMKAC 2 cut(s) 2160, 2757
Fnu4HI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
FokI GGATG 5 cut(s) 542, 618, 1865, 1989, 2714
Fsp4HI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
FspBI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
FspI TGCGCA 1 cut(s) 436
GlaI GCGC 1 cut(s) 436
GluI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
GsuI CTGGAG 5 cut(s) 791, 935, 1061, 1424, 2646
HaeIII GGCC 4 cut(s) 645, 789, 1464, 2807
HapII CCGG 3 cut(s) 477, 1584, 2112
HgaI GACGC 1 cut(s) 2101
HhaI GCGC 1 cut(s) 437
Hin1I GRCGYC 1 cut(s) 376
Hin6I GCGC 1 cut(s) 435
HinP1I GCGC 1 cut(s) 435
HincII GTYRAC 4 cut(s) 917, 1023, 2758, 3109
HindII GTYRAC 4 cut(s) 917, 1023, 2758, 3109
HindIII AAGCTT 3 cut(s) 512, 655, 1430
HpaII CCGG 3 cut(s) 477, 1584, 2112
HphI GGTGA 6 cut(s) 264, 1315, 1420, 1814, 2576, 3027
Hpy99I CGWCG 1 cut(s) 378
HpyCH4III ACNGT 4 cut(s) 70, 1184, 1613, 2629
HpyCH4IV ACGT 1 cut(s) 376
HpyF10VI GCNNNNNNNGC 4 cut(s) 477, 883, 1258, 2728
HpySE526I ACGT 1 cut(s) 376
Hsp92I GRCGYC 1 cut(s) 376
HspAI GCGC 1 cut(s) 435
Kpn2I TCCGGA 1 cut(s) 2111
KpnI GGTACC 1 cut(s) 1811
LmnI GCTCC 2 cut(s) 551, 2665
Lsp1109I GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
LweI GCATC 5 cut(s) 529, 747, 1967, 2814, 3082
MaeI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
MaeII ACGT 1 cut(s) 376
MaeIII GTNAC 4 cut(s) 226, 1388, 2711, 2909
MfeI CAATTG 2 cut(s) 1328, 2732
MflI RGATCY 4 cut(s) 1299, 1705, 2298, 2836
MhlI GDGCHC 4 cut(s) 626, 900, 2724, 2975
MlsI TGGCCA 1 cut(s) 2807
MluNI TGGCCA 1 cut(s) 2807
MlyI GAGTC 3 cut(s) 164, 2577, 2597
MmeI TCCRAC 4 cut(s) 381, 391, 2611, 3023
Mox20I TGGCCA 1 cut(s) 2807
MroI TCCGGA 1 cut(s) 2111
MroXI GAANNNNTTC 1 cut(s) 988
MscI TGGCCA 1 cut(s) 2807
MslI CAYNNNNRTG 2 cut(s) 2511, 2978
Msp20I TGGCCA 1 cut(s) 2807
MspCI CTTAAG 1 cut(s) 3005
MspI CCGG 3 cut(s) 477, 1584, 2112
MspR9I CCNGG 3 cut(s) 780, 1202, 2814
MunI CAATTG 2 cut(s) 1328, 2732
Mva1269I GAATGC 2 cut(s) 1371, 2261
MvaI CCWGG 3 cut(s) 780, 1202, 2814
MwoI GCNNNNNNNGC 4 cut(s) 477, 883, 1258, 2728
NlaIV GGNNCC 8 cut(s) 265, 553, 625, 1301, 1646, 1809, 2288, 2644
NmeAIII GCCGAG 1 cut(s) 2547
NsbI TGCGCA 1 cut(s) 436
NspI RCATGY 5 cut(s) 400, 799, 1905, 2310, 3024
NspV TTCGAA 1 cut(s) 1828
OliI CACNNNNGTG 1 cut(s) 2978
PaeI GCATGC 1 cut(s) 3024
PagI TCATGA 1 cut(s) 2479
PaqCI CACCTGC 1 cut(s) 2881
PceI AGGCCT 2 cut(s) 789, 1464
PciI ACATGT 2 cut(s) 396, 2306
PctI GAATGC 2 cut(s) 1371, 2261
PdmI GAANNNNTTC 1 cut(s) 988
PfeI GAWTC 7 cut(s) 340, 574, 1156, 1659, 2115, 2170, 3032
PflMI CCANNNNNTGG 3 cut(s) 281, 1385, 1402
PkrI GCNGC 6 cut(s) 957, 1034, 1681, 1893, 2394, 2659
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 3 cut(s) 164, 2577, 2597
PpsI GAGTC 3 cut(s) 164, 2577, 2597
PpuMI RGGWCCY 1 cut(s) 2209
PscI ACATGT 2 cut(s) 396, 2306
PshBI ATTAAT 1 cut(s) 2045
PsiI TTATAA 1 cut(s) 1062
Psp5II RGGWCCY 1 cut(s) 2209
Psp6I CCWGG 3 cut(s) 778, 1200, 2812
PspGI CCWGG 3 cut(s) 778, 1200, 2812
PspN4I GGNNCC 8 cut(s) 265, 553, 625, 1301, 1646, 1809, 2288, 2644
PspPI GGNCC 2 cut(s) 2209, 3064
PspPPI RGGWCCY 1 cut(s) 2209
PstI CTGCAG 1 cut(s) 1996
PsuI RGATCY 4 cut(s) 1299, 1705, 2298, 2836
PvuI CGATCG 1 cut(s) 100
RsaI GTAC 5 cut(s) 239, 391, 1516, 1809, 1917
RsaNI GTAC 5 cut(s) 238, 390, 1515, 1808, 1916
RseI CAYNNNNRTG 2 cut(s) 2511, 2978
SalI GTCGAC 1 cut(s) 2756
SatI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
Sau96I GGNCC 2 cut(s) 2209, 3064
SchI GAGTC 3 cut(s) 164, 2577, 2597
ScrFI CCNGG 3 cut(s) 780, 1202, 2814
SduI GDGCHC 4 cut(s) 626, 900, 2724, 2975
SfaNI GCATC 5 cut(s) 529, 747, 1967, 2814, 3082
SfcI CTRYAG 3 cut(s) 1092, 1748, 1992
SfuI TTCGAA 1 cut(s) 1828
SinI GGWCC 2 cut(s) 2209, 3064
SmiMI CAYNNNNRTG 2 cut(s) 2511, 2978
SmlI CTYRAG 2 cut(s) 1195, 3005
SmoI CTYRAG 2 cut(s) 1195, 3005
SphI GCATGC 1 cut(s) 3024
SseBI AGGCCT 2 cut(s) 789, 1464
SsiI CCGC 4 cut(s) 344, 469, 776, 924
SspI AATATT 3 cut(s) 457, 1384, 2443
SspMI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
StuI AGGCCT 2 cut(s) 789, 1464
StyD4I CCNGG 3 cut(s) 778, 1200, 2812
StyI CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 3038
TaaI ACNGT 4 cut(s) 70, 1184, 1613, 2629
TaiI ACGT 1 cut(s) 379
TaqI TCGA 4 cut(s) 1560, 1828, 2757, 2925
TfiI GAWTC 7 cut(s) 340, 574, 1156, 1659, 2115, 2170, 3032
TscAI CASTG 2 cut(s) 595, 2058
TseI GCWGC 6 cut(s) 955, 1032, 1679, 1891, 2392, 2657
TspGWI ACGGA 5 cut(s) 163, 276, 1312, 2615, 3041
TspRI CASTG 2 cut(s) 595, 2058
Van91I CCANNNNNTGG 3 cut(s) 281, 1385, 1402
Vha464I CTTAAG 1 cut(s) 3005
VpaK11BI GGWCC 2 cut(s) 2209, 3064
VspI ATTAAT 1 cut(s) 2045
XagI CCTNNNNNAGG 3 cut(s) 298, 783, 2075
XapI RAATTY 8 cut(s) 116, 411, 483, 937, 1276, 1590, 1625, 2956
XbaI TCTAGA 3 cut(s) 529, 1702, 1795
XceI RCATGY 5 cut(s) 400, 799, 1905, 2310, 3024
XcmI CCANNNNNNNNNTGG 1 cut(s) 2245
XmiI GTMKAC 2 cut(s) 2160, 2757
XmnI GAANNNNTTC 1 cut(s) 988
XspI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
ZraI GACGTC 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.