RLG00000027091
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
8342855 .. 8346705
3851 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027091

Sequence Viewer

Length: 3174 bp
ATGGAGTTGCTTTGTATACCTAGCTCATGTGCATATTGGTCTCTATTCCATCATGTCATTACCTTTCTCCTTCTTATCAACTTTTCCCCACCTAACATTGTTGCAAATGCGATCGGCAATGAAACTGATCGATTAGCTCTGCTCAAGTTCAAAGAATCCATAGTCAGTGACCCACAAGGGCTGTTGACCTCATGGAATGAATCCTTTCACTTCTGCAACTGGCAAGGAATTACTTGTGGCACAAGGCATCAGAGGGTCACTTACTTGAACCTTCAAGATGCTGGTTTGCACGGAACCATATCACCGTACATTGGGAATCTCTCCCTCCTTAGGTTACTCGACCTACAAAATAACAGCTTCTCTGGCAAGGTTCCGAAGCAAGTTAATCAATTGTTCCGACTGCGGCATCTCTTTTTGGGTTACAACAAGTTGGAGGGGGATATTCCAGTCAACCTGACATTCTGCCCTGAATTGAACATCATAAGCTTCGGATCAAACCGCCTAAGCGGCAAAATTCCAGCAGAGCTTGGCTCATTGGTGAAGCTTCTACAGCTTGATCTTGTGCAGAACAATCTAACAGGAGTCATCCCATCTTCCTTTGGAAATCTTTCATCAATCGAGGTACTTTCATTAGAACAAAACAATTTGGTGGGCAAAGTTCCAGAGGAGATAGGGCGATTGAAAAACTTGTCTGTTCTTACAATTGGTCCCAATAATCTTTCTGGTATGATCCCTCCAACCCTCTTTAACATATCATCTATGAGCAACTTCTCAATTGAAGACAATAATTTTAAAGGCGGTATACCAGCTGCAATAGGCCTCAACATGCCTAATCTCCTCCAGATGTTGCTTGGTGGAAATGATTTGTCTGGGAAAATCCCAGCTTCATTTTCTAATGCCTCTCGGCTAGAAGCACTTGATCTTTCAGAAAATAATTTTGTTGGGAAAGTTCCAACAAGTTTTGGAAATCTTCCAGATTTGTTGTGGCTAAATTTAGGTACTAATAGTCTTGGAAATTCTTCAGCCAGTGACTTGGATTTTATAACATCCTTGACAAATTGCAGCAAACTGGAATTTCTTGGTTTGATTACCAACAAATTTGGGGGTGTTTTACCAAATTCTGTAGCCAATTTGTCATCCCAACTCACATTTCTCTACCTTGGAAACAATCAAATATCAGGAAGGATTCCTGCAGCATTTGAAAATCTCATCAATCTAATAGGGTTGGGCCTGAATAATAACCTGTTCACAGGTGTCATTCCTTCTTCTTTTGGGAAGTTCCAACAGCTGCAATCATTGGGTTTACACAACAATAGATTATCAGGACGGATCCCATCGTCCATAGGAAACCTCACACAATTGTATCAACTCTACTTATCAGCAAATGAATTACAAGGAAGCATTCCTCCAAGTATCGGAAACTGCAAGAATTTGCAGGACATGGACATATCACAAAATAGCCTTAGTGGAGAATTACCACCACAGGTTATTGGTCTTTCCTCCTTGTCTATCTTACTCAACTTATCACAAAACTTACTAACTGGCAGCCTGCCTCTGGAAGTGGGTAAGCTACACAATATCAATACACTGGACATCTCTGAAAATAACTTGACTGGACAAATTCCAGAAATCATTGGTGACTGCCAGGGACTTGAATCTCTTTACCTACAAGGGAATCTCTTTCAAGAAGTCATACCTTCTTCTTTGGCTTCTTTGAAAGGTCTTCAGAAATTAGATCTTTCACGAAACAACTTGTCAGGACAAATTCCAAAAGGTCTACAAGGACTTCATTTCTTGTTATATGTCAACATTTCTTTCAATAATCTGGAGGGAGAGGTACCAAAAGAAGGAGCCTTTCAAAACACAAGCGCAGTATCATTAGTTGGAAATACAAAACTTTGTGGTGGTGTTCCGGATTTGAAGCTACCAGCATGCCCTATCAAATTACCAACACAGAGAAACAGCCATGGTTTCAAACTAAAGTTCATACTTTCTTTGGTGATTGGATGCTCTCTTCTTTTTTCATTCTTCTCTTTTCTTCATTGGAGGAGAAGATCGAAAAAGAAACAACTATCTGCAGTCTGCTCATCAATCAACTTTTTTTCGAAGGTTTCATACCAGACACTTCATCAAGCTACCGGTGGATTTTCTCTGAGCACTCTAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTCTTGGTGAGGAAGAAAACAGCATAGTTGCCATAAAGGTCCTCAACCTTCAACAAAAAGGAGCTTCCAAGAGTTTCATGGCAGAATGCAATGCACTAAGAAATATCCGGCACAGGAATCTTGTGAAGATCTTCACTTGTTGCTCCAGCACGGATTACAATGGCAATGAATTCAAAGCTCTAGTTTTTGAATATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACCAGTCAAGGAATTTGAACCTTCTTCAAAGATTGAATATTTCTGTTGATGTGGCTTCTGCATTGTGTTATCTTCATGACCATTGTGAACCTCCAATCATTCACCGGGACGTGAAGCCAAGCAATGTTCTTCTTGACGAAGACATGGTTGCTCGTGTAGGGGATTTTGGGTTAGCCAGACTCATCCCAACCAACTCGGAGTCCTCTCAAACTCAAAGTAGCACAATTCGAATAAAGGGAACGATTGGCTATGCTGCTCCAGAGTATGCAAGTGGTGCTGAGGCATCAAGACAAGGAGATGCATACAGTTATGGGATCCTTTTGTTGGAAATGTTCACAGGAAGAAGACCCACGGACGAAATGTTCAAAGATGGTTTGAATCTCCACAACTTTGTTAAGATGGCAATACCAGGAAGGCTTGTGCAGATTGTGGACCCTGCTCTTCTCACCACCCTAGAAGAGACGGCTCCTGCAGCAACAGAAAACGCAGTGAACTACATGCAAAGAGGTTATAACAATGAGATTGGAGCAGAAGAGGAAAATATAGACTATGAGAACCTAAGCAATATGAACACACATGTGTCGAACTGTATACATTCAGTCCTTCAGATCGGACTGGCATGCTCGGAGGAATCACCAAGGAATAGAATGTCTATGGAGGATGTCCTCAGGGACCTACACCAAATACAAAATGCTTATATTGGTGTTGAGATTCGTCGAGAGAGACCAAGGAGAAGCTAA

Protein Analysis

1058

Amino Acids

115.81

Weight (kDa)

6.34

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 3.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 212 6e-08 Leucine-rich repeat region
LRR_8 PF13855 184 - 240 1.4e-07 Leucine rich repeat
LRR_14 PF23598 348 - 463 1.9e-06 Leucine-rich repeat region
LRR_8 PF13855 381 - 440 1.1e-07 Leucine rich repeat
LRR_14 PF23598 514 - 610 4.4e-07 Leucine-rich repeat region
LRR_8 PF13855 550 - 609 2.8e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 718 - 933 6.8e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 718 - 944 8.8e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1043, 2946
Acc65I GGTACC 1 cut(s) 1837
AccB1I GGYRCC 1 cut(s) 1837
AccI GTMKAC 5 cut(s) 16, 802, 1777, 2190, 3025
AccIII TCCGGA 1 cut(s) 1912
AciI CCGC 5 cut(s) 403, 499, 507, 798, 2175
AclWI GGATC 7 cut(s) 499, 724, 1324, 1337, 2176, 2743, 2756
AcuI CTGAAG 3 cut(s) 1005, 1709, 3023
AfaI GTAC 4 cut(s) 308, 624, 1000, 1839
AfiI CCNNNNNNNGG 6 cut(s) 311, 330, 1415, 1555, 1847, 2758
AflIII ACRYGT 1 cut(s) 3010
AgeI ACCGGT 1 cut(s) 2138
AjiI CACGTC 1 cut(s) 2545
AjnI CCWGG 2 cut(s) 1644, 2842
AjuI GAANNNNNNNTTGG 2 cut(s) 1134, 1166
AleI CACNNNNGTG 1 cut(s) 3011
AloI GAACNNNNNNTCC 2 cut(s) 2780, 2812
Alw21I GWGCWC 1 cut(s) 2159
Alw26I GTCTC 3 cut(s) 45, 2888, 3151
AlwI GGATC 7 cut(s) 499, 724, 1324, 1337, 2176, 2743, 2756
Aor13HI TCCGGA 1 cut(s) 1912
AoxI GGCC 2 cut(s) 817, 1228
ApeKI GCWGC 8 cut(s) 809, 1062, 1193, 1288, 1545, 2422, 2687, 2906
AsiGI ACCGGT 1 cut(s) 2138
Asp700I GAANNNNTTC 4 cut(s) 204, 607, 1018, 2330
Asp718I GGTACC 1 cut(s) 1837
AspLEI GCGC 1 cut(s) 1871
AspS9I GGNCC 5 cut(s) 707, 1228, 2239, 2866, 3106
AsuC2I CCSGG 1 cut(s) 2540
AsuHPI GGTGA 8 cut(s) 294, 550, 1649, 2011, 2219, 2528, 2872, 3060
AsuII TTCGAA 2 cut(s) 2105, 2662
AvaII GGWCC 4 cut(s) 707, 2239, 2866, 3106
AxyI CCTNAGG 2 cut(s) 329, 3101
BaeI ACNNNNGTAYC 2 cut(s) 1346, 1379
BamHI GGATCC 2 cut(s) 1329, 2748
BanI GGYRCC 1 cut(s) 1837
BarI GAAGNNNNNNTAC 2 cut(s) 2099, 2131
BauI CACGAG 1 cut(s) 2586
BbsI GAAGAC 4 cut(s) 786, 1715, 2580, 2785
Bbv12I GWGCWC 1 cut(s) 2159
BbvCI CCTCAGC 1 cut(s) 2712
BbvI GCAGC 8 cut(s) 796, 1074, 1205, 1275, 1557, 2409, 2674, 2918
BccI CCATC 5 cut(s) 57, 598, 1342, 2798, 2827
BceAI ACGGC 1 cut(s) 2913
BciT130I CCWGG 2 cut(s) 1646, 2844
BcnI CCSGG 1 cut(s) 2540
BcoDI GTCTC 3 cut(s) 45, 2888, 3151
BfaI CTAG 4 cut(s) 21, 908, 2381, 2888
BfmI CTRYAG 5 cut(s) 548, 1122, 1191, 2076, 2904
BglI GCCNNNNNGGC 1 cut(s) 507
BglII AGATCT 2 cut(s) 1735, 2328
Bme1390I CCNGG 3 cut(s) 1646, 2540, 2844
Bme18I GGWCC 4 cut(s) 707, 2239, 2866, 3106
BmgBI CACGTC 1 cut(s) 2545
BmgT120I GGNCC 5 cut(s) 707, 1228, 2239, 2866, 3106
BmrFI CCNGG 3 cut(s) 1646, 2540, 2844
BmsI GCATC 6 cut(s) 256, 268, 415, 1997, 2722, 2726
BpiI GAAGAC 4 cut(s) 786, 1715, 2580, 2785
BplI GAGNNNNNCTC 2 cut(s) 515, 547
BpmI CTGGAG 4 cut(s) 824, 1847, 2329, 2676
Bpu10I CCTNAGC 3 cut(s) 503, 2712, 2993
Bpu14I TTCGAA 2 cut(s) 2105, 2662
BpuEI CTTGAG 1 cut(s) 128
BpuMI CCSGG 1 cut(s) 2540
Bsa29I ATCGAT 1 cut(s) 130
BsaI GGTCTC 2 cut(s) 45, 3151
BsaJI CCNNGG 6 cut(s) 1159, 1645, 1966, 2784, 3071, 3161
BsaWI WCCGGW 2 cut(s) 1912, 2138
Bsc4I CCNNNNNNNGG 6 cut(s) 311, 330, 1415, 1555, 1847, 2758
Bse118I RCCGGY 1 cut(s) 2138
Bse1I ACTGG 9 cut(s) 224, 446, 1026, 1074, 1546, 1593, 1618, 2437, 3054
Bse21I CCTNAGG 2 cut(s) 329, 3101
Bse3DI GCAATG 4 cut(s) 124, 2296, 2371, 2563
BseAI TCCGGA 1 cut(s) 1912
BseBI CCWGG 2 cut(s) 1646, 2844
BseCI ATCGAT 1 cut(s) 130
BseDI CCNNGG 6 cut(s) 1159, 1645, 1966, 2784, 3071, 3161
BseGI GGATG 6 cut(s) 585, 1046, 1136, 2012, 2616, 3100
BseLI CCNNNNNNNGG 6 cut(s) 311, 330, 1415, 1555, 1847, 2758
BseMI GCAATG 4 cut(s) 124, 2296, 2371, 2563
BseMII CTCAG 3 cut(s) 2144, 2703, 3115
BseNI ACTGG 9 cut(s) 224, 446, 1026, 1074, 1546, 1593, 1618, 2437, 3054
BseRI GAGGAG 4 cut(s) 680, 827, 2062, 2429
BseXI GCAGC 8 cut(s) 796, 1074, 1205, 1275, 1557, 2409, 2674, 2918
BseYI CCCAGC 1 cut(s) 880
BsgI GTGCAG 3 cut(s) 584, 2408, 2876
Bsh1285I CGRYCG 1 cut(s) 114
BshFI GGCC 2 cut(s) 819, 1230
BshNI GGYRCC 1 cut(s) 1837
BshTI ACCGGT 1 cut(s) 2138
BshVI ATCGAT 1 cut(s) 130
BsiEI CGRYCG 1 cut(s) 114
BsiHKAI GWGCWC 1 cut(s) 2159
BsiSI CCGG 4 cut(s) 1913, 2139, 2308, 2539
BslFI GGGAC 4 cut(s) 693, 1662, 2555, 3119
BslI CCNNNNNNNGG 6 cut(s) 311, 330, 1415, 1555, 1847, 2758
BsmAI GTCTC 3 cut(s) 45, 2888, 3151
BsmBI CGTCTC 1 cut(s) 2888
BsmFI GGGAC 4 cut(s) 693, 1662, 2555, 3119
BsmI GAATGC 2 cut(s) 1401, 2291
BsnI GGCC 2 cut(s) 819, 1230
Bso31I GGTCTC 2 cut(s) 45, 3151
Bsp119I TTCGAA 2 cut(s) 2105, 2662
Bsp1286I GDGCHC 1 cut(s) 2159
Bsp13I TCCGGA 1 cut(s) 1912
Bsp19I CCATGG 1 cut(s) 1966
BspACI CCGC 5 cut(s) 403, 499, 507, 798, 2175
BspANI GGCC 2 cut(s) 819, 1230
BspCNI CTCAG 3 cut(s) 2145, 2704, 3114
BspDI ATCGAT 1 cut(s) 130
BspEI TCCGGA 1 cut(s) 1912
BspHI TCATGA 1 cut(s) 2509
BspMAI CTGCAG 3 cut(s) 1195, 2080, 2908
BspPI GGATC 7 cut(s) 499, 724, 1324, 1337, 2176, 2743, 2756
BspQI GCTCTTC 1 cut(s) 2880
BspT104I TTCGAA 2 cut(s) 2105, 2662
BspT107I GGYRCC 1 cut(s) 1837
BspTNI GGTCTC 2 cut(s) 45, 3151
BsrDI GCAATG 4 cut(s) 124, 2296, 2371, 2563
BsrFI RCCGGY 1 cut(s) 2138
BsrI ACTGG 9 cut(s) 224, 446, 1026, 1074, 1546, 1593, 1618, 2437, 3054
BssAI RCCGGY 1 cut(s) 2138
BssECI CCNNGG 6 cut(s) 1159, 1645, 1966, 2784, 3071, 3161
BssNAI GTATAC 4 cut(s) 17, 803, 2191, 3026
BssSI CACGAG 1 cut(s) 2586
BssT1I CCWWGG 4 cut(s) 1159, 1966, 3071, 3161
Bst1107I GTATAC 4 cut(s) 17, 803, 2191, 3026
Bst2BI CACGAG 1 cut(s) 2586
Bst2UI CCWGG 2 cut(s) 1646, 2844
Bst4CI ACNGT 3 cut(s) 306, 2741, 3023
Bst6I CTCTTC 4 cut(s) 2019, 2880, 2886, 2961
BstAPI GCANNNNNTGC 1 cut(s) 2708
BstBI TTCGAA 2 cut(s) 2105, 2662
BstC8I GCNNGC 3 cut(s) 1550, 1933, 3055
BstDEI CTNAG 8 cut(s) 329, 503, 1463, 2153, 2297, 2712, 2993, 3101
BstDSI CCRYGG 2 cut(s) 1966, 2784
BstF5I GGATG 6 cut(s) 585, 1046, 1136, 2012, 2616, 3100
BstHHI GCGC 1 cut(s) 1871
BstMAI GTCTC 3 cut(s) 45, 2888, 3151
BstMCI CGRYCG 1 cut(s) 114
BstMWI GCNNNNNNNGC 6 cut(s) 363, 507, 550, 2181, 2708, 2906
BstNI CCWGG 2 cut(s) 1646, 2844
BstNSI RCATGY 5 cut(s) 829, 1935, 2935, 3014, 3057
BstSCI CCNGG 3 cut(s) 1644, 2538, 2842
BstSFI CTRYAG 5 cut(s) 548, 1122, 1191, 2076, 2904
BstV1I GCAGC 8 cut(s) 796, 1074, 1205, 1275, 1557, 2409, 2674, 2918
BstV2I GAAGAC 4 cut(s) 786, 1715, 2580, 2785
BstX2I RGATCY 4 cut(s) 1329, 1735, 2328, 2748
BstXI CCANNNNNNTGG 1 cut(s) 1033
BstYI RGATCY 4 cut(s) 1329, 1735, 2328, 2748
BstZ17I GTATAC 4 cut(s) 17, 803, 2191, 3026
Bsu15I ATCGAT 1 cut(s) 130
Bsu36I CCTNAGG 2 cut(s) 329, 3101
BsuRI GGCC 2 cut(s) 819, 1230
BsuTUI ATCGAT 1 cut(s) 130
BtgI CCRYGG 2 cut(s) 1966, 2784
BtrI CACGTC 1 cut(s) 2545
BtsCI GGATG 6 cut(s) 585, 1046, 1136, 2012, 2616, 3100
BtsI GCAGTG 1 cut(s) 2928
BtsIMutI CAGTG 4 cut(s) 172, 1033, 1586, 2928
Cac8I GCNNGC 3 cut(s) 1550, 1933, 3055
CciI TCATGA 1 cut(s) 2509
CfoI GCGC 1 cut(s) 1871
Cfr10I RCCGGY 1 cut(s) 2138
Cfr13I GGNCC 5 cut(s) 707, 1228, 2239, 2866, 3106
ClaI ATCGAT 1 cut(s) 130
Csp6I GTAC 4 cut(s) 307, 623, 999, 1838
CspAI ACCGGT 1 cut(s) 2138
CviQI GTAC 4 cut(s) 307, 623, 999, 1838
DdeI CTNAG 8 cut(s) 329, 503, 1463, 2153, 2297, 2712, 2993, 3101
DraI TTTAAA 1 cut(s) 793
Eam1104I CTCTTC 4 cut(s) 2019, 2880, 2886, 2961
EarI CTCTTC 4 cut(s) 2019, 2880, 2886, 2961
Eco130I CCWWGG 4 cut(s) 1159, 1966, 3071, 3161
Eco147I AGGCCT 1 cut(s) 819
Eco31I GGTCTC 2 cut(s) 45, 3151
Eco47I GGWCC 4 cut(s) 707, 2239, 2866, 3106
Eco57I CTGAAG 3 cut(s) 1005, 1709, 3023
Eco81I CCTNAGG 2 cut(s) 329, 3101
EcoO109I RGGNCCY 2 cut(s) 2239, 3106
EcoRI GAATTC 1 cut(s) 2369
EcoRII CCWGG 2 cut(s) 1644, 2842
EcoT14I CCWWGG 4 cut(s) 1159, 1966, 3071, 3161
EcoT22I ATGCAT 1 cut(s) 2737
ErhI CCWWGG 4 cut(s) 1159, 1966, 3071, 3161
Esp3I CGTCTC 1 cut(s) 2888
FalI AAGNNNNNCTT 2 cut(s) 2187, 2219
FaqI GGGAC 4 cut(s) 693, 1662, 2555, 3119
FblI GTMKAC 5 cut(s) 16, 802, 1777, 2190, 3025
FokI GGATG 6 cut(s) 572, 1033, 1123, 2019, 2603, 3107
FspBI CTAG 4 cut(s) 21, 908, 2381, 2888
GlaI GCGC 1 cut(s) 1870
GsaI CCCAGC 1 cut(s) 884
GsuI CTGGAG 4 cut(s) 824, 1847, 2329, 2676
HaeIII GGCC 2 cut(s) 819, 1230
HapII CCGG 4 cut(s) 1913, 2139, 2308, 2539
HhaI GCGC 1 cut(s) 1871
Hin6I GCGC 1 cut(s) 1869
HinP1I GCGC 1 cut(s) 1869
HincII GTYRAC 3 cut(s) 186, 451, 1807
HindII GTYRAC 3 cut(s) 186, 451, 1807
HindIII AAGCTT 2 cut(s) 484, 542
HpaII CCGG 4 cut(s) 1913, 2139, 2308, 2539
HphI GGTGA 8 cut(s) 294, 550, 1649, 2011, 2219, 2528, 2872, 3060
Hpy99I CGWCG 1 cut(s) 3153
HpyCH4III ACNGT 3 cut(s) 306, 2741, 3023
HpyCH4IV ACGT 1 cut(s) 2544
HpyF10VI GCNNNNNNNGC 6 cut(s) 363, 507, 550, 2181, 2708, 2906
HpyF3I CTNAG 8 cut(s) 329, 503, 1463, 2153, 2297, 2712, 2993, 3101
HpySE526I ACGT 1 cut(s) 2544
HspAI GCGC 1 cut(s) 1869
Kpn2I TCCGGA 1 cut(s) 1912
KpnI GGTACC 1 cut(s) 1841
LguI GCTCTTC 1 cut(s) 2880
LmnI GCTCC 6 cut(s) 1850, 2261, 2348, 2695, 2905, 2960
Lsp1109I GCAGC 8 cut(s) 796, 1074, 1205, 1275, 1557, 2409, 2674, 2918
LweI GCATC 6 cut(s) 256, 268, 415, 1997, 2722, 2726
MaeI CTAG 4 cut(s) 21, 908, 2381, 2888
MaeII ACGT 1 cut(s) 2544
MaeIII GTNAC 6 cut(s) 167, 256, 333, 419, 1028, 1637
MfeI CAATTG 4 cut(s) 389, 702, 774, 1358
MflI RGATCY 4 cut(s) 1329, 1735, 2328, 2748
MhlI GDGCHC 1 cut(s) 2159
MlyI GAGTC 3 cut(s) 591, 2607, 2642
MmeI TCCRAC 7 cut(s) 411, 421, 761, 977, 1306, 1864, 2739
Mph1103I ATGCAT 1 cut(s) 2737
MroI TCCGGA 1 cut(s) 1912
MroXI GAANNNNTTC 4 cut(s) 204, 607, 1018, 2330
MseI TTAA 4 cut(s) 384, 747, 792, 2829
MslI CAYNNNNRTG 1 cut(s) 3011
MspA1I CMGCKG 2 cut(s) 809, 1288
MspI CCGG 4 cut(s) 1913, 2139, 2308, 2539
MspR9I CCNGG 3 cut(s) 1646, 2540, 2844
MunI CAATTG 4 cut(s) 389, 702, 774, 1358
Mva1269I GAATGC 2 cut(s) 1401, 2291
MvaI CCWGG 2 cut(s) 1646, 2844
MwoI GCNNNNNNNGC 6 cut(s) 363, 507, 550, 2181, 2708, 2906
NciI CCSGG 1 cut(s) 2540
NcoI CCATGG 1 cut(s) 1966
NmeAIII GCCGAG 1 cut(s) 883
NmuCI GTSAC 4 cut(s) 167, 256, 1028, 1637
NsiI ATGCAT 1 cut(s) 2737
NspI RCATGY 5 cut(s) 829, 1935, 2935, 3014, 3057
NspV TTCGAA 2 cut(s) 2105, 2662
OliI CACNNNNGTG 1 cut(s) 3011
PaeI GCATGC 2 cut(s) 1935, 3057
PagI TCATGA 1 cut(s) 2509
PceI AGGCCT 1 cut(s) 819
PciI ACATGT 1 cut(s) 3010
PciSI GCTCTTC 1 cut(s) 2880
PctI GAATGC 2 cut(s) 1401, 2291
PdmI GAANNNNTTC 4 cut(s) 204, 607, 1018, 2330
PinAI ACCGGT 1 cut(s) 2138
Ple19I CGATCG 1 cut(s) 114
PleI GAGTC 3 cut(s) 590, 2607, 2641
PpsI GAGTC 3 cut(s) 590, 2607, 2641
PpuMI RGGWCCY 2 cut(s) 2239, 3106
PscI ACATGT 1 cut(s) 3010
PsiI TTATAA 2 cut(s) 1043, 2946
Psp5II RGGWCCY 2 cut(s) 2239, 3106
Psp6I CCWGG 2 cut(s) 1644, 2842
PspFI CCCAGC 1 cut(s) 880
PspGI CCWGG 2 cut(s) 1644, 2842
PspPI GGNCC 5 cut(s) 707, 1228, 2239, 2866, 3106
PspPPI RGGWCCY 2 cut(s) 2239, 3106
PstI CTGCAG 3 cut(s) 1195, 2080, 2908
PsuI RGATCY 4 cut(s) 1329, 1735, 2328, 2748
PvuI CGATCG 1 cut(s) 114
PvuII CAGCTG 2 cut(s) 809, 1288
RsaI GTAC 4 cut(s) 308, 624, 1000, 1839
RsaNI GTAC 4 cut(s) 307, 623, 999, 1838
RseI CAYNNNNRTG 1 cut(s) 3011
SapI GCTCTTC 1 cut(s) 2880
SaqAI TTAA 4 cut(s) 384, 747, 792, 2829
Sau96I GGNCC 5 cut(s) 707, 1228, 2239, 2866, 3106
SchI GAGTC 3 cut(s) 591, 2607, 2642
ScrFI CCNGG 3 cut(s) 1646, 2540, 2844
SduI GDGCHC 1 cut(s) 2159
SfaNI GCATC 6 cut(s) 256, 268, 415, 1997, 2722, 2726
SfcI CTRYAG 5 cut(s) 548, 1122, 1191, 2076, 2904
SfuI TTCGAA 2 cut(s) 2105, 2662
SinI GGWCC 4 cut(s) 707, 2239, 2866, 3106
SmiMI CAYNNNNRTG 1 cut(s) 3011
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
SphI GCATGC 2 cut(s) 1935, 3057
SseBI AGGCCT 1 cut(s) 819
SsiI CCGC 5 cut(s) 403, 499, 507, 798, 2175
SspI AATATT 1 cut(s) 2473
SspMI CTAG 4 cut(s) 21, 908, 2381, 2888
StuI AGGCCT 1 cut(s) 819
StyD4I CCNGG 3 cut(s) 1644, 2538, 2842
StyI CCWWGG 4 cut(s) 1159, 1966, 3071, 3161
TaaI ACNGT 3 cut(s) 306, 2741, 3023
TaiI ACGT 1 cut(s) 2547
TaqI TCGA 8 cut(s) 130, 339, 618, 2057, 2105, 2662, 3017, 3151
TauI GCSGC 2 cut(s) 406, 510
Tru1I TTAA 4 cut(s) 384, 747, 792, 2829
Tru9I TTAA 4 cut(s) 384, 747, 792, 2829
TscAI CASTG 4 cut(s) 172, 1033, 1593, 2928
TseFI GTSAC 4 cut(s) 167, 256, 1028, 1637
TseI GCWGC 8 cut(s) 809, 1062, 1193, 1288, 1545, 2422, 2687, 2906
Tsp45I GTSAC 4 cut(s) 167, 256, 1028, 1637
TspGWI ACGGA 4 cut(s) 306, 1342, 2366, 2801
TspRI CASTG 4 cut(s) 172, 1033, 1593, 2928
VpaK11BI GGWCC 4 cut(s) 707, 2239, 2866, 3106
XceI RCATGY 5 cut(s) 829, 1935, 2935, 3014, 3057
XcmI CCANNNNNNNNNTGG 3 cut(s) 848, 981, 2275
XmiI GTMKAC 5 cut(s) 16, 802, 1777, 2190, 3025
XmnI GAANNNNTTC 4 cut(s) 204, 607, 1018, 2330
XspI CTAG 4 cut(s) 21, 908, 2381, 2888
Zsp2I ATGCAT 1 cut(s) 2737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.