FvH4_7g24160
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000248
Physical Location & Seq
Forward (+)
18688444 .. 18691952
3509 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g24160.t1

Sequence Viewer

Length: 3186 bp
ATGGAGAACTTTAGATACCTGCATGTCCTCGCCCTTCTCCTTTTCACCAATCTTCTCCGACCTACCACTGTCGTAAGTTCATTTGGAAATGAAACCGATCACTTGGCTTTGCTCAAATTCAAAGAATCCATAGTCGCCGATCCACAGGGGTTCTTGAACTCATGGAATGACTCCGTTCACTTTTGCAAATGGCAAGGAGTTACTTGTGGCATAAGGCATCAGAGAGTAACAGCCTTGAACCTTCCACACTCTAATTTGCATGGCACCATATCACCATACATTGGCAACCTCTCCTTTCTCAGGACCTTTTACATTCCGAACAACAGCCTCTCTGGCAAGATTCCGCAACAAGTTGATCGCTTGTTCCGACTGCGACATCTCAATCTAAGTCTCAACATTTTGGAGGGGGGAATTCCAGACAACCTGAGCTTTTGCCGGGAATTAATCATCATAAGCTTTGGATCAAACCGCCTTACCGGCAAAATTCCTTCAGAGATAGGCTCGTTGATGAAGCTTGTGCATCTCAATCTAGAGAAAAACAATCTGACAGGAGGCATCCCACCTTCCTTGGGGAATCTTTCATCACTCGCTGTACTTACCTTGCCATGGAACAATTTGGTGGGCACAGTTCCAGAGGTGCTAGGTCGATTGAGAAGCTTATCAAGTTTTGCAATTGGTGTCAATGATCTCTCTGGTATGTTCCCTCCCTCCCTTTTCAACATATCATCTATGAAGGACCTTTCAATTACTGGCAATAAACTTAAGGGTAGTATTCCGCCTGGTATAGGCCAAAACATGCCTAATCTCCAAAAAATGTTGCTCGGCATGAATGAATTCTCAACGCAAATCCCAGCTTCATTTTCCAATGCTTCTCAGCTTCAAGAGCTTGATGTTTGGGGAAATCATTTTGTAGGGCAAGTTCCCTTAAGTTTTGGGAATCTTCCTAATCTCCGGTGGCTTAACTTCGGGTATAATAATCTAGGAAGCAATTCATCAAATGATTTGATATTTATGACACCTTTGACAAATTGCAGCAATCTGGAAATGCTTTGTCTGAGTGATAACAACTTTGGAGGTGTTTTACCCAACTCTGTATCCAATTTCTCAACCCAACTGACTGAACTCTATCTTGGGGGCAGTCAAATAGCGGGAACGATTCCTGAGACATTAGGAAATCTCAAATCTTTAATAGTTTTGGGATTGGATGATAACTTGCTCACTGGAACCATTCCAACTTCTTTTGGGAAGTTACAAAACCTGCAATTATTATATATAAATTCCAATAGACTATCAGGACGGATCCCATCTTCTCTAGGAAATCTCACCCGATTGTCTCAACTTTATTTACCAGAAAATGAATTAGAAGGAAGAATTCCTCCAAATATTGGTAATTGCAAACAGCTGCATGAGATGGATATATCAAACAATAAGCTTAGTGGAGAAATACCACCACAGATTATGGGTCTCTCCTCCTTGTCTATGTTGCTCAACTTATCGCAAAACTTGCTAACTGGGAATCTGTCTGTGGAAGTGGGTAAGCTGAATAATATCAGGACACTAGACATCTCTGGAAACAATCTAACGGGAGAAATTGCAGAAACCATTGGGAAATGTGAGAGCCTTGAATTTCTTTACCTACAAGGGAACCACTTTCAAGGTACAATACCATCTTCTTTGGCTTCTCTGAGAGGTCTTCAGTATCTAGATCTTTCACAAAACAACTTGTCAGGACATATTCCAAAAGACCTACAGGGACTTCCATTCTTGATCTATTTGAACCTTTCGTCCAATTACCTAGAGGGTGAGGTACCGAAAGAAGGAGTTTTTCGAAACACAAGTGCAATATCATTAGATGGAAATGCCATACTCTGCGGTGGTGTTTCGGAATTGCAGCTAACAGCATGTCGCGTTGAAGAAACAAAGCATAGAAAGTTGCATGGTTTCAAACTGAAGTTCACAATTTCTTTAGTCGTTGGATGCTCTCTTCTGTTTGCAGTGCTCATAGCTCTTTATTGGACGAGAAAAAATCAAAAGAAGAAACCGTTATATGCTGCAGTGTCATCAGTCACACTCCTTCCAAACGTTACGTACCAGACACTACATCAAGCTACTGCCGGATTCTCTCCAAGCAATCAAATTGGATCAGGCGGTTTTGGCTCTGTCTACAAAGGGATTCTTGATCAAGACAGCATTGTTGCCATAAAGGTTCTCAACCTTCAACAGAAAGGAGCTTCGAAAAGTTTCATGGCTGAATGCAATGCACTGAGAAATATCCGACATAGGAATCTTGTGAAGATCATATCATGTTGCTCCAGCACAGATTATAATGGTAATGACTTTAAAGCTCTCATTTTTGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAAAAAACCAATATGCAGGAAGTTTGAACCTTCTTCAAAGACTGAATATAGCTGTCGATGTGGCTTCTGCTCTGTGTTATCTTCATGACCACTGTGAACCACAAATTATTCACCGTGACATTAAACCAGGCAACGTTCTTCTGGACGATGACATGGTTGCTCATGTAGGTGATTTTGGGTTAGCAAGACTCATCCAATCGACTACATGCTCCTCTGAACATCAAAGTAGCACAGTTGGGATAAAGGGAACCATTGGCTATACTGCTCCAGAGTATGCAGTTGGTGTTGAGCCATCAACGCAAGGGGATGTATATAGTTATGGGATACTTGTGCTGCAATTGTTCACAGGAAGAAGACCAACTGATGAAATGTTTGTAGACAGCTACAATATCCATACTTTTGTGGAGACGGGCATACAAGGAGTGCTTATGCAAATTGTGGATCCTACTCTTATTGCCATACTAGAAGAAGAAATTGAGACTTCAACAACCAACGATGAAGTGACCAACCTCTGTGGTTACGACAGTGAAATCGAAGCTGATGAAGAAAACATAGACGGTGAGAACTTAAACAAGATGAAGAGTTACGTGTGGAAGTACATACTACCAACCCTTAAGATTGGACTTGCATGCTCCGAAGAATCACCAAGGAATAGAATTTCTATGAAGGAGGTCCTCAAGGAGCTTCAGCATGTCAAGAATACTTACACGTACTCGGTGCCGACATGCGTCCAGAGAGGCCAAGAAGAAGCTAAAAGAGATAACTTCCACCAGCAAGCTGTCCCAATATGA

Protein Analysis

1062

Amino Acids

116.79

Weight (kDa)

6.11

Isoelectric Point (pI)

36.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 1.2e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 323 5.3e-13 Leucine-rich repeat region
LRR_8 PF13855 243 - 303 6.4e-06 Leucine rich repeat
LRR_14 PF23598 334 - 448 2.6e-08 Leucine-rich repeat region
LRR_8 PF13855 371 - 430 4.6e-08 Leucine rich repeat
LRR_8 PF13855 396 - 454 4.3e-07 Leucine rich repeat
LRR_14 PF23598 504 - 595 3.8e-06 Leucine-rich repeat region
LRR_8 PF13855 540 - 599 3.7e-09 Leucine rich repeat
Pkinase PF00069 710 - 925 1.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 711 - 952 1.7e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2325
Acc36I ACCTGC 2 cut(s) 27, 1266
Acc65I GGTACC 1 cut(s) 1807
AccB1I GGYRCC 3 cut(s) 263, 1807, 3112
AccB7I CCANNNNNTGG 2 cut(s) 281, 1385
AccI GTMKAC 2 cut(s) 2163, 2772
AccII CGCG 1 cut(s) 1908
AciI CCGC 6 cut(s) 344, 469, 776, 1148, 1872, 2148
AclI AACGTT 2 cut(s) 2082, 2529
AclWI GGATC 7 cut(s) 134, 469, 1294, 1307, 2149, 2831, 2844
AcsI RAATTY 8 cut(s) 116, 411, 483, 833, 1276, 1371, 1625, 3051
AcuI CTGAAG 4 cut(s) 474, 1679, 1970, 3065
AfaI GTAC 6 cut(s) 594, 1660, 1809, 2090, 2993, 3107
AfiI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 606, 785, 1385, 1817
AflII CTTAAG 3 cut(s) 761, 925, 3008
AflIII ACRYGT 2 cut(s) 2982, 3102
AjnI CCWGG 2 cut(s) 778, 2521
AjuI GAANNNNNNNTTGG 2 cut(s) 1113, 1145
AloI GAACNNNNNNTCC 2 cut(s) 1769, 1801
Alw21I GWGCWC 1 cut(s) 2001
Alw26I GTCTC 6 cut(s) 395, 1157, 1338, 1469, 2795, 2867
AlwI GGATC 7 cut(s) 134, 469, 1294, 1307, 2149, 2831, 2844
AoxI GGCC 2 cut(s) 787, 3133
ApeKI GCWGC 6 cut(s) 1032, 1402, 1891, 2051, 2389, 2728
ApoI RAATTY 8 cut(s) 116, 411, 483, 833, 1276, 1371, 1625, 3051
AseI ATTAAT 1 cut(s) 443
Asp700I GAANNNNTTC 3 cut(s) 833, 988, 2240
Asp718I GGTACC 1 cut(s) 1807
AspS9I GGNCC 3 cut(s) 303, 736, 3067
AsuC2I CCSGG 1 cut(s) 437
AsuHPI GGTGA 8 cut(s) 37, 264, 1315, 1814, 2498, 2576, 2966, 3030
AsuII TTCGAA 2 cut(s) 1828, 2234
AvaII GGWCC 3 cut(s) 303, 736, 3067
BaeGI GKGCMC 1 cut(s) 626
BamHI GGATCC 2 cut(s) 1299, 2836
BanI GGYRCC 3 cut(s) 263, 1807, 3112
BbsI GAAGAC 2 cut(s) 1685, 2755
Bbv12I GWGCWC 1 cut(s) 2001
BbvI GCAGC 6 cut(s) 1044, 1389, 1903, 2038, 2376, 2715
BccI CCATC 5 cut(s) 1312, 1405, 1675, 1847, 2695
BciT130I CCWGG 2 cut(s) 780, 2523
BciVI GTATCC 2 cut(s) 1105, 2712
BclI TGATCA 1 cut(s) 2179
BcnI CCSGG 1 cut(s) 437
BcoDI GTCTC 6 cut(s) 395, 1157, 1338, 1469, 2795, 2867
BfaI CTAG 8 cut(s) 530, 641, 980, 1313, 1559, 1703, 1796, 2858
BfmI CTRYAG 2 cut(s) 1748, 2052
BfrI CTTAAG 3 cut(s) 761, 925, 3008
BfuAI ACCTGC 2 cut(s) 27, 1266
BfuI GTATCC 2 cut(s) 1105, 2712
BglI GCCNNNNNGGC 2 cut(s) 333, 477
BglII AGATCT 1 cut(s) 1705
BisI GCNGC 6 cut(s) 1033, 1403, 1892, 2052, 2390, 2729
BlsI GCNGC 6 cut(s) 1034, 1404, 1893, 2053, 2391, 2730
Bme1390I CCNGG 3 cut(s) 437, 780, 2523
Bme18I GGWCC 3 cut(s) 303, 736, 3067
BmgT120I GGNCC 3 cut(s) 303, 736, 3067
BmiI GGNNCC 8 cut(s) 265, 1225, 1301, 1646, 1809, 2644, 2838, 3114
BmrFI CCNGG 3 cut(s) 437, 780, 2523
BmrI ACTGGG 1 cut(s) 1521
BmsI GCATC 4 cut(s) 226, 529, 564, 1967
BmuI ACTGGG 1 cut(s) 1521
BoxI GACNNNNGTC 1 cut(s) 3122
BpiI GAAGAC 2 cut(s) 1685, 2755
BplI GAGNNNNNCTC 2 cut(s) 485, 517
BpmI CTGGAG 2 cut(s) 2296, 2646
Bpu10I CCTNAGC 1 cut(s) 425
Bpu14I TTCGAA 2 cut(s) 1828, 2234
BpuEI CTTGAG 1 cut(s) 3056
BpuMI CCSGG 1 cut(s) 437
BsaAI YACGTR 3 cut(s) 2088, 2983, 3105
BsaI GGTCTC 1 cut(s) 1469
BsaJI CCNNGG 3 cut(s) 567, 605, 3041
BsaWI WCCGGW 1 cut(s) 951
Bsc4I CCNNNNNNNGG 7 cut(s) 281, 300, 569, 606, 785, 1385, 1817
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 3 cut(s) 754, 1225, 1516
Bse3DI GCAATG 1 cut(s) 2263
BseBI CCWGG 2 cut(s) 780, 2523
BseDI CCNNGG 3 cut(s) 567, 605, 3041
BseGI GGATG 5 cut(s) 555, 1210, 1982, 2586, 2707
BseLI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 606, 785, 1385, 1817
BseMI GCAATG 1 cut(s) 2263
BseMII CTCAG 7 cut(s) 313, 416, 887, 1046, 1152, 1676, 2255
BseNI ACTGG 3 cut(s) 754, 1225, 1516
BseRI GAGGAG 3 cut(s) 1459, 2396, 2596
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 6 cut(s) 1044, 1389, 1903, 2038, 2376, 2715
BseYI CCCAGC 1 cut(s) 850
BsgI GTGCAG 1 cut(s) 2375
Bsh1236I CGCG 1 cut(s) 1908
BshFI GGCC 2 cut(s) 789, 3135
BshNI GGYRCC 3 cut(s) 263, 1807, 3112
BsiHKAI GWGCWC 1 cut(s) 2001
BsiSI CCGG 4 cut(s) 436, 477, 952, 2115
BslFI GGGAC 2 cut(s) 1767, 3161
BslI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 606, 785, 1385, 1817
BsmAI GTCTC 6 cut(s) 395, 1157, 1338, 1469, 2795, 2867
BsmBI CGTCTC 1 cut(s) 2795
BsmFI GGGAC 2 cut(s) 1767, 3161
BsmI GAATGC 1 cut(s) 2258
BsnI GGCC 2 cut(s) 789, 3135
Bso31I GGTCTC 1 cut(s) 1469
Bsp119I TTCGAA 2 cut(s) 1828, 2234
Bsp1286I GDGCHC 2 cut(s) 626, 2001
Bsp19I CCATGG 1 cut(s) 605
BspACI CCGC 6 cut(s) 344, 469, 776, 1148, 1872, 2148
BspANI GGCC 2 cut(s) 789, 3135
BspCNI CTCAG 7 cut(s) 312, 417, 886, 1047, 1153, 1677, 2256
BspFNI CGCG 1 cut(s) 1908
BspHI TCATGA 1 cut(s) 2479
BspLI GGNNCC 8 cut(s) 265, 1225, 1301, 1646, 1809, 2644, 2838, 3114
BspMAI CTGCAG 1 cut(s) 2056
BspMI ACCTGC 2 cut(s) 27, 1266
BspPI GGATC 7 cut(s) 134, 469, 1294, 1307, 2149, 2831, 2844
BspT104I TTCGAA 2 cut(s) 1828, 2234
BspT107I GGYRCC 3 cut(s) 263, 1807, 3112
BspTI CTTAAG 3 cut(s) 761, 925, 3008
BspTNI GGTCTC 1 cut(s) 1469
BsrDI GCAATG 1 cut(s) 2263
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 3 cut(s) 754, 1225, 1516
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 3 cut(s) 567, 605, 3041
BssT1I CCWWGG 3 cut(s) 567, 605, 3041
Bst2UI CCWGG 2 cut(s) 780, 2523
Bst4CI ACNGT 8 cut(s) 70, 628, 2043, 2489, 2510, 2629, 2921, 2954
Bst6I CTCTTC 2 cut(s) 1989, 2969
BstAFI CTTAAG 3 cut(s) 761, 925, 3008
BstAPI GCANNNNNTGC 1 cut(s) 1504
BstBAI YACGTR 3 cut(s) 2088, 2983, 3105
BstBI TTCGAA 2 cut(s) 1828, 2234
BstC8I GCNNGC 2 cut(s) 3025, 3171
BstDEI CTNAG 9 cut(s) 299, 386, 425, 873, 1055, 1161, 1433, 1685, 2264
BstDSI CCRYGG 1 cut(s) 605
BstENI CCTNNNNNAGG 2 cut(s) 298, 783
BstF5I GGATG 5 cut(s) 555, 1210, 1982, 2586, 2707
BstFNI CGCG 1 cut(s) 1908
BstMAI GTCTC 6 cut(s) 395, 1157, 1338, 1469, 2795, 2867
BstMWI GCNNNNNNNGC 6 cut(s) 333, 477, 883, 1504, 2154, 2692
BstNI CCWGG 2 cut(s) 780, 2523
BstNSI RCATGY 7 cut(s) 26, 799, 1905, 2604, 3027, 3089, 3123
BstPAI GACNNNNGTC 1 cut(s) 3122
BstSCI CCNGG 3 cut(s) 435, 778, 2521
BstSFI CTRYAG 2 cut(s) 1748, 2052
BstSLI GKGCMC 1 cut(s) 626
BstSNI TACGTA 1 cut(s) 2088
BstUI CGCG 1 cut(s) 1908
BstV1I GCAGC 6 cut(s) 1044, 1389, 1903, 2038, 2376, 2715
BstV2I GAAGAC 2 cut(s) 1685, 2755
BstX2I RGATCY 3 cut(s) 1299, 1705, 2836
BstYI RGATCY 3 cut(s) 1299, 1705, 2836
BsuI GTATCC 2 cut(s) 1105, 2712
BsuRI GGCC 2 cut(s) 789, 3135
BtgI CCRYGG 1 cut(s) 605
BtsCI GGATG 5 cut(s) 555, 1210, 1982, 2586, 2707
BtsI GCAGTG 2 cut(s) 2001, 2061
BtsIMutI CAGTG 7 cut(s) 66, 1218, 2001, 2061, 2261, 2485, 2926
BveI ACCTGC 2 cut(s) 27, 1266
Cac8I GCNNGC 2 cut(s) 3025, 3171
CciI TCATGA 1 cut(s) 2479
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 3 cut(s) 303, 736, 3067
CseI GACGC 1 cut(s) 3112
Csp6I GTAC 6 cut(s) 593, 1659, 1808, 2089, 2992, 3106
CspCI CAANNNNNGTGG 4 cut(s) 549, 584, 2890, 2925
CviQI GTAC 6 cut(s) 593, 1659, 1808, 2089, 2992, 3106
DdeI CTNAG 9 cut(s) 299, 386, 425, 873, 1055, 1161, 1433, 1685, 2264
DraI TTTAAA 1 cut(s) 2341
Eam1104I CTCTTC 2 cut(s) 1989, 2969
EarI CTCTTC 2 cut(s) 1989, 2969
EciI GGCGGA 1 cut(s) 765
Eco105I TACGTA 1 cut(s) 2088
Eco130I CCWWGG 3 cut(s) 567, 605, 3041
Eco31I GGTCTC 1 cut(s) 1469
Eco47I GGWCC 3 cut(s) 303, 736, 3067
Eco57I CTGAAG 4 cut(s) 474, 1679, 1970, 3065
EcoNI CCTNNNNNAGG 2 cut(s) 298, 783
EcoO109I RGGNCCY 3 cut(s) 303, 736, 3067
EcoRI GAATTC 3 cut(s) 411, 833, 1371
EcoRII CCWGG 2 cut(s) 778, 2521
EcoT14I CCWWGG 3 cut(s) 567, 605, 3041
ErhI CCWWGG 3 cut(s) 567, 605, 3041
Esp3I CGTCTC 1 cut(s) 2795
FalI AAGNNNNNCTT 4 cut(s) 2160, 2192, 2805, 2837
FaqI GGGAC 2 cut(s) 1767, 3161
FauI CCCGC 1 cut(s) 1141
FbaI TGATCA 1 cut(s) 2179
FblI GTMKAC 2 cut(s) 2163, 2772
Fnu4HI GCNGC 6 cut(s) 1033, 1403, 1892, 2052, 2390, 2729
FokI GGATG 5 cut(s) 542, 1217, 1989, 2573, 2714
Fsp4HI GCNGC 6 cut(s) 1033, 1403, 1892, 2052, 2390, 2729
FspBI CTAG 8 cut(s) 530, 641, 980, 1313, 1559, 1703, 1796, 2858
GluI GCNGC 6 cut(s) 1033, 1403, 1892, 2052, 2390, 2729
GsaI CCCAGC 1 cut(s) 854
GsuI CTGGAG 2 cut(s) 2296, 2646
HaeIII GGCC 2 cut(s) 789, 3135
HapII CCGG 4 cut(s) 436, 477, 952, 2115
HgaI GACGC 1 cut(s) 3112
HindIII AAGCTT 4 cut(s) 454, 512, 655, 1430
HpaII CCGG 4 cut(s) 436, 477, 952, 2115
HphI GGTGA 8 cut(s) 37, 264, 1315, 1814, 2498, 2576, 2966, 3030
Hpy166II GTNNAC 6 cut(s) 178, 1956, 2164, 2492, 2739, 2773
Hpy8I GTNNAC 6 cut(s) 178, 1956, 2164, 2492, 2739, 2773
HpyCH4III ACNGT 8 cut(s) 70, 628, 2043, 2489, 2510, 2629, 2921, 2954
HpyCH4IV ACGT 5 cut(s) 2082, 2087, 2529, 2982, 3104
HpyF10VI GCNNNNNNNGC 6 cut(s) 333, 477, 883, 1504, 2154, 2692
HpyF3I CTNAG 9 cut(s) 299, 386, 425, 873, 1055, 1161, 1433, 1685, 2264
HpySE526I ACGT 5 cut(s) 2082, 2087, 2529, 2982, 3104
KpnI GGTACC 1 cut(s) 1811
Ksp22I TGATCA 1 cut(s) 2179
LmnI GCTCC 6 cut(s) 2228, 2315, 2609, 2665, 3032, 3076
Lsp1109I GCAGC 6 cut(s) 1044, 1389, 1903, 2038, 2376, 2715
LweI GCATC 4 cut(s) 226, 529, 564, 1967
MaeI CTAG 8 cut(s) 530, 641, 980, 1313, 1559, 1703, 1796, 2858
MaeII ACGT 5 cut(s) 2082, 2087, 2529, 2982, 3104
MaeIII GTNAC 9 cut(s) 199, 226, 1248, 2065, 2083, 2510, 2896, 2912, 2978
MfeI CAATTG 2 cut(s) 672, 2732
MflI RGATCY 3 cut(s) 1299, 1705, 2836
MhlI GDGCHC 2 cut(s) 626, 2001
MlyI GAGTC 2 cut(s) 164, 2577
MmeI TCCRAC 5 cut(s) 82, 391, 1256, 1954, 2299
MroXI GAANNNNTTC 3 cut(s) 833, 988, 2240
MseI TTAA 9 cut(s) 443, 762, 926, 960, 1187, 2340, 2517, 2963, 3009
MslI CAYNNNNRTG 1 cut(s) 2562
MspA1I CMGCKG 1 cut(s) 1402
MspCI CTTAAG 3 cut(s) 761, 925, 3008
MspI CCGG 4 cut(s) 436, 477, 952, 2115
MspR9I CCNGG 3 cut(s) 437, 780, 2523
MunI CAATTG 2 cut(s) 672, 2732
Mva1269I GAATGC 1 cut(s) 2258
MvaI CCWGG 2 cut(s) 780, 2523
MvnI CGCG 1 cut(s) 1908
MwoI GCNNNNNNNGC 6 cut(s) 333, 477, 883, 1504, 2154, 2692
NciI CCSGG 1 cut(s) 437
NcoI CCATGG 1 cut(s) 605
NlaIV GGNNCC 8 cut(s) 265, 1225, 1301, 1646, 1809, 2644, 2838, 3114
NmeAIII GCCGAG 1 cut(s) 801
NmuCI GTSAC 3 cut(s) 2065, 2510, 2896
NspI RCATGY 7 cut(s) 26, 799, 1905, 2604, 3027, 3089, 3123
NspV TTCGAA 2 cut(s) 1828, 2234
PaeI GCATGC 1 cut(s) 3027
PagI TCATGA 1 cut(s) 2479
PcsI WCGNNNNNNNCGW 1 cut(s) 364
PctI GAATGC 1 cut(s) 2258
PdmI GAANNNNTTC 3 cut(s) 833, 988, 2240
PflMI CCANNNNNTGG 2 cut(s) 281, 1385
PkrI GCNGC 6 cut(s) 1034, 1404, 1893, 2053, 2391, 2730
PleI GAGTC 2 cut(s) 164, 2577
PpsI GAGTC 2 cut(s) 164, 2577
Ppu21I YACGTR 3 cut(s) 2088, 2983, 3105
PpuMI RGGWCCY 3 cut(s) 303, 736, 3067
PshAI GACNNNNGTC 1 cut(s) 3122
PshBI ATTAAT 1 cut(s) 443
PsiI TTATAA 1 cut(s) 2325
Psp1406I AACGTT 2 cut(s) 2082, 2529
Psp5II RGGWCCY 3 cut(s) 303, 736, 3067
Psp6I CCWGG 2 cut(s) 778, 2521
PspFI CCCAGC 1 cut(s) 850
PspGI CCWGG 2 cut(s) 778, 2521
PspN4I GGNNCC 8 cut(s) 265, 1225, 1301, 1646, 1809, 2644, 2838, 3114
PspPI GGNCC 3 cut(s) 303, 736, 3067
PspPPI RGGWCCY 3 cut(s) 303, 736, 3067
PsrI GAACNNNNNNTAC 3 cut(s) 31, 903, 935
PstI CTGCAG 1 cut(s) 2056
PsuI RGATCY 3 cut(s) 1299, 1705, 2836
PvuII CAGCTG 1 cut(s) 1402
RsaI GTAC 6 cut(s) 594, 1660, 1809, 2090, 2993, 3107
RsaNI GTAC 6 cut(s) 593, 1659, 1808, 2089, 2992, 3106
RseI CAYNNNNRTG 1 cut(s) 2562
SaqAI TTAA 9 cut(s) 443, 762, 926, 960, 1187, 2340, 2517, 2963, 3009
SatI GCNGC 6 cut(s) 1033, 1403, 1892, 2052, 2390, 2729
Sau96I GGNCC 3 cut(s) 303, 736, 3067
SchI GAGTC 2 cut(s) 164, 2577
ScrFI CCNGG 3 cut(s) 437, 780, 2523
SduI GDGCHC 2 cut(s) 626, 2001
SfaNI GCATC 4 cut(s) 226, 529, 564, 1967
SfcI CTRYAG 2 cut(s) 1748, 2052
SfuI TTCGAA 2 cut(s) 1828, 2234
SinI GGWCC 3 cut(s) 303, 736, 3067
SmiMI CAYNNNNRTG 1 cut(s) 2562
SmlI CTYRAG 4 cut(s) 761, 925, 3008, 3071
SmoI CTYRAG 4 cut(s) 761, 925, 3008, 3071
SnaBI TACGTA 1 cut(s) 2088
SphI GCATGC 1 cut(s) 3027
SsiI CCGC 6 cut(s) 344, 469, 776, 1148, 1872, 2148
SspI AATATT 1 cut(s) 1384
SspMI CTAG 8 cut(s) 530, 641, 980, 1313, 1559, 1703, 1796, 2858
StyD4I CCNGG 3 cut(s) 435, 778, 2521
StyI CCWWGG 3 cut(s) 567, 605, 3041
TaaI ACNGT 8 cut(s) 70, 628, 2043, 2489, 2510, 2629, 2921, 2954
TaiI ACGT 5 cut(s) 2085, 2090, 2532, 2985, 3107
TaqI TCGA 6 cut(s) 646, 1828, 2234, 2451, 2594, 2928
TatI WGTACW 2 cut(s) 592, 2991
Tru1I TTAA 9 cut(s) 443, 762, 926, 960, 1187, 2340, 2517, 2963, 3009
Tru9I TTAA 9 cut(s) 443, 762, 926, 960, 1187, 2340, 2517, 2963, 3009
TscAI CASTG 7 cut(s) 73, 1225, 2001, 2061, 2268, 2492, 2926
TseFI GTSAC 3 cut(s) 2065, 2510, 2896
TseI GCWGC 6 cut(s) 1032, 1402, 1891, 2051, 2389, 2728
Tsp45I GTSAC 3 cut(s) 2065, 2510, 2896
TspGWI ACGGA 2 cut(s) 163, 1312
TspRI CASTG 7 cut(s) 73, 1225, 2001, 2061, 2268, 2492, 2926
Van91I CCANNNNNTGG 2 cut(s) 281, 1385
Vha464I CTTAAG 3 cut(s) 761, 925, 3008
VpaK11BI GGWCC 3 cut(s) 303, 736, 3067
VspI ATTAAT 1 cut(s) 443
XagI CCTNNNNNAGG 2 cut(s) 298, 783
XapI RAATTY 8 cut(s) 116, 411, 483, 833, 1276, 1371, 1625, 3051
XbaI TCTAGA 2 cut(s) 529, 1702
XceI RCATGY 7 cut(s) 26, 799, 1905, 2604, 3027, 3089, 3123
XmiI GTMKAC 2 cut(s) 2163, 2772
XmnI GAANNNNTTC 3 cut(s) 833, 988, 2240
XspI CTAG 8 cut(s) 530, 641, 980, 1313, 1559, 1703, 1796, 2858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.