RLG00000029244
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
35288341 .. 35291828
3488 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029244

Sequence Viewer

Length: 2745 bp
ATGTTGGAGGGGGGAATTCCAGTCAACCTGACCTTGTGTGCAGAACTGAGCTACTTAAATATTGGAGAAAACCGCTTTACCGGCAAAATTCCTTCAGAGATCGGGTCATTGAGGAAGCTTGTGCATCTCACTCTGGAGGAAAACAGTTTGACAGGAGCCATCCCACCTTCTTTGGGGAATCTTTCATCACTCACTGAACTTTTTCTGGGATGGAACAATTTGGTGGGCACCATTCCAGAGGTGCTAGGCCGATTGAGAAGCTTATCACTTTTTGCAATTGGTCTCAATAATCTCTCTGGTTTGATCCCTCCCTCCCTTTTTAACATATCATCTATGAACGGCATCTCACTTACGGGTAATATGTTTAAGGGTAGTATTCCGGCTGGTATAGGCCTAAACATGCCTAATCTCCAGATATTGTTCCTCTCCGAAAATGAATTCTCTGGAGAAATCCCTGCTTCACTTTCCAATGCTTCTCAGCTTCATTCGCTTGATTTTGGGCTCAATAATTTTGTTGGCCAACTTCCCGCAAGTTTTGGAAATTTTCCTAATCTCCAGCAGCTCAACTTCGAGGTCAATAATCTAGGAAGTAATTCATCAAATGATTTGGCATTTATATCATTGTTGACAAATTGCAGCAATCTGGAGATGTTTTCTCTGAGTTATAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAATTTCTCAACTCAACTGACTGAACTCTACCTTGGAGGTAATCAAATAGTGGGAACGATTCCTAAAGCATTAGGAAATCTCAACAGTTTAATACACTTGAGCCTGGAACATAACTTGTTCACAGGTATCATTCCAGCTTCTTTTGGGAAGTTGCAAAAATTGCAAAGATTATTTTTAAATTCCAATAGATTATCGGGACAGATCCCATCTTCTCTTGGAAACCTCACCCAATTGTTTCTACTCTACTTATTAACAAATGAATTAGAAGGAAGCATTCCTCCAAATATTGGTAACTGCCAAAATCTGCAGGTGATGGATATATCACACAATAAGCTTAGTGGAGATATACCATCACAGGTCATAGGCTTGTCCTCCTTCTCTATCAAGCTCAATTTATCACAAAACTCGCTAACAGGCACTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAACACACTCGATATCTCTGATAATAATTTGACCGGAGGAATTCTAGAAATTATTGGAGCCTGTTTGAGCCTTGAATTTCTTTACCTCCAAGGGAACCACTTTCAAGGAATCATACCTTCTTCTTTGGCTGCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGAAACAACTTGTCAGGACATATTCCAAAAGACCTACAAAGACTTCCATTCTTGATCCATTTGAACCTTTCGTTCAATAATCTAGAGGGTGAGGTACCGAAAGAAAGAGTTTTTAGAAACACAAGTGCAATATCACTGGATGGAAATACCAGACTTTGTGGAGGTGTTTCAGAATTGCAGCTGCCAGCATGCCCCATCAAAGTACCAAAGCAAAGAAAGTGGCATGGTTTCAAACTAAAGTTCACAATTTCCTTGGTCTCTGGATGCTCTCTTCTATCTGCAGTCGTCTTAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAAGAAACCATTAATAGCAATGTCATCAATTAACTTCCTTCCAAAGGTTTCATACCAGACGCTTCATCATGCCACTGGCGGATTCTCTCCAAGCAATCAAATTGGATCAGGCGGTTTTGGTTCTGTATACAAAGGGATTCTTAATCAAGAAGAAAACAATGTTGTTGCCATCAAGGTCCTCAACCTTCAACAGAAAGGTGCTTCCAAGAGTTTTGTGGTTGAATGCAATGCACTAAGAAATATCCAGCACAGGAACCTTGTGAAGATCTTGACATGTTGCTCTAGCACGGACTACAATGGTAATGACTTCAAAGCTCTAGTCTTTGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCATAGAGAAAATCAATCAAGGAGTTTGAACCTTCTTCAAAGACTGAATATTGCTGTTGATTTGGCTTCTGCATTGTATTATCTCCATGACCATTGTGAACCACATATCATTCACTGCGACATGAAGCCGAGCAACGTTCTTCTTGATGATGACATGGTTGCTCGTGTTGGTGATTTTGGGTTGGCAAGACTCATCTCAACGACCACAGCCTCCTATCAAAATCAAAGTACAACGGTTGGAATAAAGGGAACCATTGGCTATGCTGCTCCTGAGTATGCAACTGGTGTTGAGCCATCAAGGCAAGGGGATGTATATAGTTACGGGGTGCTCATGTTGCAAATGTTCACAGGAAGAAGACCTATCGACGAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAAGATGGCCATACCAGGAAGAGTGATGCAGATTATAGATCCTACTCTTCTTGCCACTTTAGAAGAGACAACACCTGCAACATCACAAAATGTAGTGAACTACATCAATGGTTACAATAATGAAATCGAAGCAGTTGAAGAAGACATTGACAATGAGAATTTAAGCAACATGAGCACTTATGTGTGGAAGTGCATACTTCCAACCCTTAAGATTGGACTTGCATGCTCAGAAGAATCACCAAGGGATAGAATGTCTATGGAAGAGGTCCACAGGAAGCTACACCATATAAAAGATGCTTACTCTGATGTTGACATCTGTCAAGAAAGGCCAAGAAGAAGTTGA

Protein Analysis

915

Amino Acids

100.3

Weight (kDa)

6.33

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 15 - 74 4.2e-06 Leucine rich repeat
LRR_14 PF23598 15 - 89 4.4e-06 Leucine-rich repeat region
LRR_8 PF13855 239 - 298 4.1e-11 Leucine rich repeat
LRR_8 PF13855 264 - 322 9.5e-06 Leucine rich repeat
LRR_8 PF13855 409 - 467 9e-09 Leucine rich repeat
Pkinase PF00069 577 - 799 2.4e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 578 - 792 4.1e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AarI CACCTGC 2 cut(s) 1000, 2485
Acc36I ACCTGC 2 cut(s) 1000, 2485
Acc65I GGTACC 1 cut(s) 1411
AccB1I GGYRCC 2 cut(s) 227, 1411
AccB7I CCANNNNNTGG 1 cut(s) 989
AccI GTMKAC 1 cut(s) 1764
AciI CCGC 4 cut(s) 73, 528, 1716, 1749
AclI AACGTT 1 cut(s) 2133
AclWI GGATC 5 cut(s) 298, 898, 1366, 1750, 2435
AcoI YGGCCR 2 cut(s) 517, 2409
AcsI RAATTY 8 cut(s) 15, 87, 437, 541, 880, 1194, 1229, 2560
AcuI CTGAAG 3 cut(s) 78, 1166, 1283
AfaI GTAC 3 cut(s) 1413, 1521, 2227
AfiI CCNNNNNNNGG 3 cut(s) 173, 989, 1681
AflII CTTAAG 1 cut(s) 2609
AflIII ACRYGT 1 cut(s) 1910
AjnI CCWGG 2 cut(s) 804, 2416
AjuI GAANNNNNNNTTGG 2 cut(s) 717, 749
AleI CACNNNNGTG 1 cut(s) 2582
Alw21I GWGCWC 2 cut(s) 2328, 2579
Alw26I GTCTC 3 cut(s) 287, 1579, 2462
AlwI GGATC 5 cut(s) 298, 898, 1366, 1750, 2435
AoxI GGCC 5 cut(s) 247, 391, 517, 2409, 2729
ApeKI GCWGC 7 cut(s) 559, 636, 1283, 1495, 1498, 1996, 2261
ApoI RAATTY 8 cut(s) 15, 87, 437, 541, 880, 1194, 1229, 2560
ArsI GACNNNNNNTTYG 2 cut(s) 1941, 1973
AseI ATTAAT 1 cut(s) 1649
Asp700I GAANNNNTTC 2 cut(s) 201, 592
Asp718I GGTACC 1 cut(s) 1411
AspS9I GGNCC 2 cut(s) 1813, 2668
AsuHPI GGTGA 5 cut(s) 919, 1024, 1418, 2180, 2631
AvaII GGWCC 2 cut(s) 1813, 2668
BaeGI GKGCMC 1 cut(s) 230
BalI TGGCCA 2 cut(s) 519, 2411
BanI GGYRCC 2 cut(s) 227, 1411
BanII GRGCYC 1 cut(s) 504
BauI CACGAG 1 cut(s) 2160
BbsI GAAGAC 3 cut(s) 1289, 2359, 2550
Bbv12I GWGCWC 2 cut(s) 2328, 2579
BbvI GCAGC 7 cut(s) 571, 648, 1270, 1485, 1507, 1983, 2248
BceAI ACGGC 1 cut(s) 355
BciT130I CCWGG 2 cut(s) 806, 2418
BcoDI GTCTC 3 cut(s) 287, 1579, 2462
BfaI CTAG 7 cut(s) 245, 584, 1199, 1307, 1400, 1920, 1955
BfmI CTRYAG 3 cut(s) 696, 1007, 1596
BfrI CTTAAG 1 cut(s) 2609
BfuAI ACCTGC 2 cut(s) 1000, 2485
BglI GCCNNNNNGGC 1 cut(s) 2296
BglII AGATCT 2 cut(s) 1309, 1902
BisI GCNGC 7 cut(s) 560, 637, 1284, 1496, 1499, 1997, 2262
BlsI GCNGC 7 cut(s) 561, 638, 1285, 1497, 1500, 1998, 2263
Bme1390I CCNGG 2 cut(s) 806, 2418
Bme18I GGWCC 2 cut(s) 1813, 2668
BmgT120I GGNCC 2 cut(s) 1813, 2668
BmiI GGNNCC 7 cut(s) 157, 229, 1213, 1250, 1413, 1892, 2248
BmrFI CCNGG 2 cut(s) 806, 2418
BmsI GCATC 5 cut(s) 133, 351, 1571, 2418, 2686
BoxI GACNNNNGTC 1 cut(s) 2718
BpiI GAAGAC 3 cut(s) 1289, 2359, 2550
BplI GAGNNNNNCTC 2 cut(s) 1615, 1647
BpmI CTGGAG 5 cut(s) 155, 395, 465, 539, 665
BpuEI CTTGAG 1 cut(s) 820
BsaI GGTCTC 2 cut(s) 287, 1579
BsaJI CCNNGG 4 cut(s) 733, 1243, 1569, 2642
BsaWI WCCGGW 1 cut(s) 1187
Bsc4I CCNNNNNNNGG 3 cut(s) 173, 989, 1681
Bse118I RCCGGY 1 cut(s) 80
Bse1I ACTGG 4 cut(s) 20, 1458, 1717, 2284
Bse3DI GCAATG 2 cut(s) 1662, 1870
BseBI CCWGG 2 cut(s) 806, 2418
BseDI CCNNGG 4 cut(s) 733, 1243, 1569, 2642
BseGI GGATG 5 cut(s) 159, 215, 1462, 1586, 2311
BseLI CCNNNNNNNGG 3 cut(s) 173, 989, 1681
BseMI GCAATG 2 cut(s) 1662, 1870
BseMII CTCAG 5 cut(s) 38, 491, 650, 2259, 2643
BseNI ACTGG 4 cut(s) 20, 1458, 1717, 2284
BseRI GAGGAG 2 cut(s) 1636, 2003
BseSI GKGCMC 1 cut(s) 230
BseXI GCAGC 7 cut(s) 571, 648, 1270, 1485, 1507, 1983, 2248
BsgI GTGCAG 1 cut(s) 60
BshFI GGCC 5 cut(s) 249, 393, 519, 2411, 2731
BshNI GGYRCC 2 cut(s) 227, 1411
BsiHKAI GWGCWC 2 cut(s) 2328, 2579
BsiSI CCGG 3 cut(s) 81, 380, 1188
BslFI GGGAC 1 cut(s) 912
BslI CCNNNNNNNGG 3 cut(s) 173, 989, 1681
BsmAI GTCTC 3 cut(s) 287, 1579, 2462
BsmFI GGGAC 1 cut(s) 912
BsmI GAATGC 2 cut(s) 975, 1865
BsnI GGCC 5 cut(s) 249, 393, 519, 2411, 2731
Bso31I GGTCTC 2 cut(s) 287, 1579
Bsp1286I GDGCHC 4 cut(s) 230, 504, 2328, 2579
Bsp143I GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
BspACI CCGC 4 cut(s) 73, 528, 1716, 1749
BspANI GGCC 5 cut(s) 249, 393, 519, 2411, 2731
BspCNI CTCAG 5 cut(s) 39, 490, 651, 2260, 2642
BspLI GGNNCC 7 cut(s) 157, 229, 1213, 1250, 1413, 1892, 2248
BspMAI CTGCAG 2 cut(s) 1011, 1600
BspMI ACCTGC 2 cut(s) 1000, 2485
BspPI GGATC 5 cut(s) 298, 898, 1366, 1750, 2435
BspT107I GGYRCC 2 cut(s) 227, 1411
BspTI CTTAAG 1 cut(s) 2609
BspTNI GGTCTC 2 cut(s) 287, 1579
BsrDI GCAATG 2 cut(s) 1662, 1870
BsrFI RCCGGY 1 cut(s) 80
BsrI ACTGG 4 cut(s) 20, 1458, 1717, 2284
BssAI RCCGGY 1 cut(s) 80
BssECI CCNNGG 4 cut(s) 733, 1243, 1569, 2642
BssMI GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
BssNAI GTATAC 1 cut(s) 1765
BssSI CACGAG 1 cut(s) 2160
BssT1I CCWWGG 4 cut(s) 733, 1243, 1569, 2642
Bst1107I GTATAC 1 cut(s) 1765
Bst2BI CACGAG 1 cut(s) 2160
Bst2UI CCWGG 2 cut(s) 806, 2418
Bst4CI ACNGT 3 cut(s) 146, 788, 2233
Bst6I CTCTTC 5 cut(s) 1593, 2416, 2454, 2460, 2658
BstAFI CTTAAG 1 cut(s) 2609
BstAPI GCANNNNNTGC 1 cut(s) 862
BstC8I GCNNGC 3 cut(s) 1503, 1507, 2626
BstDEI CTNAG 8 cut(s) 47, 477, 659, 1037, 1606, 1871, 2268, 2629
BstENI CCTNNNNNAGG 1 cut(s) 1679
BstF5I GGATG 5 cut(s) 159, 215, 1462, 1586, 2311
BstKTI GATC 8 cut(s) 102, 306, 906, 1312, 1374, 1745, 1905, 2443
BstMAI GTCTC 3 cut(s) 287, 1579, 2462
BstMBI GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
BstMWI GCNNNNNNNGC 6 cut(s) 81, 487, 862, 2296, 2332, 2574
BstNI CCWGG 2 cut(s) 806, 2418
BstNSI RCATGY 4 cut(s) 403, 1509, 1914, 2628
BstPAI GACNNNNGTC 1 cut(s) 2718
BstSCI CCNGG 2 cut(s) 804, 2416
BstSFI CTRYAG 3 cut(s) 696, 1007, 1596
BstSLI GKGCMC 1 cut(s) 230
BstV1I GCAGC 7 cut(s) 571, 648, 1270, 1485, 1507, 1983, 2248
BstV2I GAAGAC 3 cut(s) 1289, 2359, 2550
BstX2I RGATCY 4 cut(s) 903, 1309, 1902, 2440
BstYI RGATCY 4 cut(s) 903, 1309, 1902, 2440
BstZ17I GTATAC 1 cut(s) 1765
BsuRI GGCC 5 cut(s) 249, 393, 519, 2411, 2731
BtsCI GGATG 5 cut(s) 159, 215, 1462, 1586, 2311
BtsI GCAGTG 1 cut(s) 2110
BtsIMutI CAGTG 4 cut(s) 192, 1451, 1710, 2110
BveI ACCTGC 2 cut(s) 1000, 2485
Cac8I GCNNGC 3 cut(s) 1503, 1507, 2626
Cfr10I RCCGGY 1 cut(s) 80
Cfr13I GGNCC 2 cut(s) 1813, 2668
CseI GACGC 1 cut(s) 1705
Csp6I GTAC 3 cut(s) 1412, 1520, 2226
CspCI CAANNNNNGTGG 4 cut(s) 153, 188, 1517, 1552
CviQI GTAC 3 cut(s) 1412, 1520, 2226
DdeI CTNAG 8 cut(s) 47, 477, 659, 1037, 1606, 1871, 2268, 2629
DpnI GATC 8 cut(s) 101, 305, 905, 1311, 1373, 1744, 1904, 2442
DpnII GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
DraI TTTAAA 2 cut(s) 879, 2374
EaeI YGGCCR 2 cut(s) 517, 2409
Eam1104I CTCTTC 5 cut(s) 1593, 2416, 2454, 2460, 2658
EarI CTCTTC 5 cut(s) 1593, 2416, 2454, 2460, 2658
EciI GGCGGA 1 cut(s) 1731
Eco130I CCWWGG 4 cut(s) 733, 1243, 1569, 2642
Eco147I AGGCCT 1 cut(s) 393
Eco24I GRGCYC 1 cut(s) 504
Eco31I GGTCTC 2 cut(s) 287, 1579
Eco32I GATATC 1 cut(s) 1168
Eco47I GGWCC 2 cut(s) 1813, 2668
Eco57I CTGAAG 3 cut(s) 78, 1166, 1283
EcoNI CCTNNNNNAGG 1 cut(s) 1679
EcoO109I RGGNCCY 1 cut(s) 1813
EcoRI GAATTC 3 cut(s) 15, 437, 1194
EcoRII CCWGG 2 cut(s) 804, 2416
EcoRV GATATC 1 cut(s) 1168
EcoT14I CCWWGG 4 cut(s) 733, 1243, 1569, 2642
EcoT38I GRGCYC 1 cut(s) 504
ErhI CCWWGG 4 cut(s) 733, 1243, 1569, 2642
FalI AAGNNNNNCTT 2 cut(s) 1761, 1793
FaqI GGGAC 1 cut(s) 912
FauI CCCGC 1 cut(s) 535
FblI GTMKAC 1 cut(s) 1764
Fnu4HI GCNGC 7 cut(s) 560, 637, 1284, 1496, 1499, 1997, 2262
FokI GGATG 5 cut(s) 146, 222, 1469, 1593, 2318
FriOI GRGCYC 1 cut(s) 504
Fsp4HI GCNGC 7 cut(s) 560, 637, 1284, 1496, 1499, 1997, 2262
FspBI CTAG 7 cut(s) 245, 584, 1199, 1307, 1400, 1920, 1955
GluI GCNGC 7 cut(s) 560, 637, 1284, 1496, 1499, 1997, 2262
GsuI CTGGAG 5 cut(s) 155, 395, 465, 539, 665
HaeIII GGCC 5 cut(s) 249, 393, 519, 2411, 2731
HapII CCGG 3 cut(s) 81, 380, 1188
HgaI GACGC 1 cut(s) 1705
HincII GTYRAC 3 cut(s) 25, 627, 2713
HindII GTYRAC 3 cut(s) 25, 627, 2713
HindIII AAGCTT 3 cut(s) 116, 259, 1034
HinfI GANTC 7 cut(s) 178, 760, 1263, 1719, 1774, 2187, 2636
HpaII CCGG 3 cut(s) 81, 380, 1188
HphI GGTGA 5 cut(s) 919, 1024, 1418, 2180, 2631
Hpy188I TCNGA 7 cut(s) 97, 430, 660, 1174, 1489, 2632, 2707
Hpy99I CGWCG 1 cut(s) 2366
HpyAV CCTTC 8 cut(s) 102, 177, 962, 1087, 1281, 1685, 1832, 2039
HpyCH4III ACNGT 3 cut(s) 146, 788, 2233
HpyCH4IV ACGT 1 cut(s) 2133
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 487, 862, 2296, 2332, 2574
HpyF3I CTNAG 8 cut(s) 47, 477, 659, 1037, 1606, 1871, 2268, 2629
HpySE526I ACGT 1 cut(s) 2133
KpnI GGTACC 1 cut(s) 1415
Kzo9I GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
LmnI GCTCC 3 cut(s) 155, 1211, 2269
Lsp1109I GCAGC 7 cut(s) 571, 648, 1270, 1485, 1507, 1983, 2248
LweI GCATC 5 cut(s) 133, 351, 1571, 2418, 2686
MaeI CTAG 7 cut(s) 245, 584, 1199, 1307, 1400, 1920, 1955
MaeII ACGT 1 cut(s) 2133
MaeIII GTNAC 3 cut(s) 992, 2315, 2513
MalI GATC 8 cut(s) 101, 305, 905, 1311, 1373, 1744, 1904, 2442
MboI GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
MfeI CAATTG 2 cut(s) 276, 932
MflI RGATCY 4 cut(s) 903, 1309, 1902, 2440
MhlI GDGCHC 4 cut(s) 230, 504, 2328, 2579
MlsI TGGCCA 2 cut(s) 519, 2411
MluNI TGGCCA 2 cut(s) 519, 2411
MlyI GAGTC 1 cut(s) 2181
MmeI TCCRAC 2 cut(s) 2215, 2627
Mox20I TGGCCA 2 cut(s) 519, 2411
MroXI GAANNNNTTC 2 cut(s) 201, 592
MscI TGGCCA 2 cut(s) 519, 2411
MslI CAYNNNNRTG 1 cut(s) 2582
Msp20I TGGCCA 2 cut(s) 519, 2411
MspA1I CMGCKG 1 cut(s) 1498
MspCI CTTAAG 1 cut(s) 2609
MspI CCGG 3 cut(s) 81, 380, 1188
MspR9I CCNGG 2 cut(s) 806, 2418
MunI CAATTG 2 cut(s) 276, 932
Mva1269I GAATGC 2 cut(s) 975, 1865
MvaI CCWGG 2 cut(s) 806, 2418
MwoI GCNNNNNNNGC 6 cut(s) 81, 487, 862, 2296, 2332, 2574
NdeII GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
NlaIV GGNNCC 7 cut(s) 157, 229, 1213, 1250, 1413, 1892, 2248
NmeAIII GCCGAG 1 cut(s) 2151
NspI RCATGY 4 cut(s) 403, 1509, 1914, 2628
OliI CACNNNNGTG 1 cut(s) 2582
PaeI GCATGC 2 cut(s) 1509, 2628
PaqCI CACCTGC 2 cut(s) 1000, 2485
PceI AGGCCT 1 cut(s) 393
PciI ACATGT 1 cut(s) 1910
PctI GAATGC 2 cut(s) 975, 1865
PdmI GAANNNNTTC 2 cut(s) 201, 592
PfeI GAWTC 6 cut(s) 178, 760, 1263, 1719, 1774, 2636
PflMI CCANNNNNTGG 1 cut(s) 989
PkrI GCNGC 7 cut(s) 561, 638, 1285, 1497, 1500, 1998, 2263
PleI GAGTC 1 cut(s) 2181
PpsI GAGTC 1 cut(s) 2181
PpuMI RGGWCCY 1 cut(s) 1813
PscI ACATGT 1 cut(s) 1910
PshAI GACNNNNGTC 1 cut(s) 2718
PshBI ATTAAT 1 cut(s) 1649
PsiI TTATAA 1 cut(s) 666
Psp1406I AACGTT 1 cut(s) 2133
Psp5II RGGWCCY 1 cut(s) 1813
Psp6I CCWGG 2 cut(s) 804, 2416
PspGI CCWGG 2 cut(s) 804, 2416
PspN4I GGNNCC 7 cut(s) 157, 229, 1213, 1250, 1413, 1892, 2248
PspPI GGNCC 2 cut(s) 1813, 2668
PspPPI RGGWCCY 1 cut(s) 1813
PstI CTGCAG 2 cut(s) 1011, 1600
PsuI RGATCY 4 cut(s) 903, 1309, 1902, 2440
PvuII CAGCTG 1 cut(s) 1498
RsaI GTAC 3 cut(s) 1413, 1521, 2227
RsaNI GTAC 3 cut(s) 1412, 1520, 2226
RseI CAYNNNNRTG 1 cut(s) 2582
SatI GCNGC 7 cut(s) 560, 637, 1284, 1496, 1499, 1997, 2262
Sau3AI GATC 8 cut(s) 99, 303, 903, 1309, 1371, 1742, 1902, 2440
Sau96I GGNCC 2 cut(s) 1813, 2668
SchI GAGTC 1 cut(s) 2181
ScrFI CCNGG 2 cut(s) 806, 2418
SduI GDGCHC 4 cut(s) 230, 504, 2328, 2579
SfaNI GCATC 5 cut(s) 133, 351, 1571, 2418, 2686
SfcI CTRYAG 3 cut(s) 696, 1007, 1596
SinI GGWCC 2 cut(s) 1813, 2668
SmiMI CAYNNNNRTG 1 cut(s) 2582
SmlI CTYRAG 2 cut(s) 799, 2609
SmoI CTYRAG 2 cut(s) 799, 2609
SphI GCATGC 2 cut(s) 1509, 2628
SseBI AGGCCT 1 cut(s) 393
SsiI CCGC 4 cut(s) 73, 528, 1716, 1749
SspI AATATT 3 cut(s) 61, 988, 2047
SspMI CTAG 7 cut(s) 245, 584, 1199, 1307, 1400, 1920, 1955
StuI AGGCCT 1 cut(s) 393
StyD4I CCNGG 2 cut(s) 804, 2416
StyI CCWWGG 4 cut(s) 733, 1243, 1569, 2642
TaaI ACNGT 3 cut(s) 146, 788, 2233
TaiI ACGT 1 cut(s) 2136
TaqI TCGA 4 cut(s) 570, 1164, 2361, 2529
TatI WGTACW 1 cut(s) 2225
TfiI GAWTC 6 cut(s) 178, 760, 1263, 1719, 1774, 2636
TscAI CASTG 4 cut(s) 199, 1458, 1717, 2117
TseI GCWGC 7 cut(s) 559, 636, 1283, 1495, 1498, 1996, 2261
TspGWI ACGGA 1 cut(s) 1940
TspRI CASTG 4 cut(s) 199, 1458, 1717, 2117
Van91I CCANNNNNTGG 1 cut(s) 989
Vha464I CTTAAG 1 cut(s) 2609
VpaK11BI GGWCC 2 cut(s) 1813, 2668
VspI ATTAAT 1 cut(s) 1649
XagI CCTNNNNNAGG 1 cut(s) 1679
XapI RAATTY 8 cut(s) 15, 87, 437, 541, 880, 1194, 1229, 2560
XbaI TCTAGA 3 cut(s) 1198, 1306, 1399
XceI RCATGY 4 cut(s) 403, 1509, 1914, 2628
XcmI CCANNNNNNNNNTGG 1 cut(s) 1849
XmiI GTMKAC 1 cut(s) 1764
XmnI GAANNNNTTC 2 cut(s) 201, 592
XspI CTAG 7 cut(s) 245, 584, 1199, 1307, 1400, 1920, 1955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.