RchiOBHm_Chr1g0370281
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
59794919 .. 59798351
3433 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59444

Sequence Viewer

Length: 3072 bp
ATGGAGCTTCATGAACCCAGGCTATGTGCATTTTGGTTTAAATCCCTTCATGTGATTACCCATCTCCTCCTTGTTATGAACTTCTTCCTACCTACCACTATTGCAAGATCATTTGGAAATGAAACCGATCGATTTGCTTTACTCAAATTCAAAGAATCCATAATCACTGACCCACTAGGGTTCTTGAACACATGGAATGACTCCCTTCACTTTTGCAACTGGCATGGGATTTCCTGCGGCTCAAGGCATCAGAGAGTAGTAGCCTTGAACCTTTCTCATTCTGATTTGCATGGAACCATATCACCTTACACTGGCAACCTCTCTTTTCTAAGGTCCATCGACCTTGAAAACAACAACTTCTCTGTCAACCTGACCTCCTGCCCGGAACTGAGTCACATAGATTTATGGTCAAACCGTCTTACAGGCACAATTCCACCATACCTTGGCTCATTGGTGAAGCTTGAGTTGATAGGTCTTGAGGAAAACAAATTGACAGGAGGCATCCCACCTTCCTTGGGAAATCTTTCATCAATCGGTTTCCTTGGTCTAGAATCTAACAATTTGGTGGGCAACGTTCCAGAGGAGATAGGCCGATTGAGCAACTTATTTTTTTTTACCGTTGGTGCCAATAAACTCTCTGGTATGATACCTCCTTCCCTTTTTAACATATCATCTATGGAGTCCTTCATACTTACATCTAACAAGTTTAAGGGCAGTATTCCACCCGCCATAGGCCTCAACATGCCACATCTCATAGAAGTGTACGTCGGCGGAAATGAACTCTTTGGGCAAATCCCATCTTCATTTTCCAATGCTTCTCAGATTAATGTACTTGATGTTGGGGATAATAATTTTGTAGGGCAAGTTCCCAAATGTTTTGGAGATCTTCCGGATCTCCAGTGGCTCAGTGTAAGTGAAAATTATCTAGGAAGTTTTTCTGCTAATGACTTGGATTTTATAACATCCTTGGTCAATTGCAGCAAACTGGATACCCTTGATATGGGTTCCAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAACTTGTCAACTCAACTGACTGCAATCTTCTTTGAAGGCAATCAAATATCAGGAGTGATCCCTGAAACATTAGGAAATCTCAACAGTTTAATAGCCTTGGGCCTCGAGTATAACCTATTCAGAGGTGCCATTCCAACCTCTATTGCCAAGTTACAAAAGCTGCAAGCATTGGCTTTTCAAGGTAATAGATTATCAGGACGGATCCCATCGTCCATAGGAAACCTCACTCAATTGTATCTACTCAACTTGTCAGCAAATCACTTAGAAGGAAACATTCCTCCAAGTATTGGGAACTGCCAACCTTTGCAAAAGTTGGATATATCACATAATAGGCTAAGTGGAGATATACCCCCACACGTGATTGGTCTTTCCTCCCTTGTCTCTCTCAGCTTATCACGAAACTCACTAACTGGCAACCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATTTTTTCCCTTGACATCTCTGAAAATAATTTTACCGGAGAAATTCCAGAAGTCATTGGTGACTGTATGAGCCTTGAACTTCTTTACCTACAAGGGAATCTCTTTCAAGGTATGATACCTTCTTCTCTGGCTTCTTTGAAAGGTCTTCGGTACTTGGATTTTTCAAGAAATAACTTGTCAGGTCAAATTCCAAAGGATATCCAAAGACTTACCTTGTTGCTATATTTGAACCTGTCTTTCAATAATCTGGAAGGTGAGGTACCAAAAGAAGGAGCCTTTCGAAACACAAGCGCAACATCCTTGGTTGGAAATAGCAAACTTTGTGGCGGTGATGTTTCTGAATTTCAGCTACCAGCATGCCCTATCAGAAAGCAGAGAATATTCAAACTAAAGTTCACAATTTCGTTAGTGGCTGGATGCTCTTTTGTGTTTGCAGTCTTGCTTACTCTTTATTGGAGGAGAAAATCGAGAAAGAAACCATTAGCTGTGGACTCATCAATCAACTTCTTTCCAGAGGTTTCATACAAGACACTTCATCAAGCTACTGGTGGATTCTCTCCGAGCACTCTAATTGGATCAGGCAGTTTTGGCTCTGTATACAAAGGGATTCTTGATCACAGAGAAAAGAACGTAGTTGCCATGAAGGTCATCAACCTTCAACAGAGAGGGGCCTCTAAGAGTTTCACGGTAGAATGCAAAGCACTAAGAAATATCCGGCACCGGAATCTTGTCAAGATCTTAACTTGCTGCTCCAGCATGGATTACAATGGTACTGAATTCAAAGCTCTAATCTTTGAATATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACGGATCAATGAGTTTGACCCTTCTTCAAAGATTGAATATTGTTGTTGATGTGGCTTCTGCATTATGTTATCTTCATGACCATTGTGAACCTCCAATCATTCACTGCGACATGAAGCCAAGCAATGTTCTTCTTGACGATGATATGGTTGCTCATGTAGGTGATTTTGGCTTAGCCAGACTCATCTCAACCACCACAGAGTCCTCGCAAACTCAAAGTAGCACAATTGGAATAAAGGGAACAATCGGCTATGCTGCTCCAGAGTACGCAAGTGGTGTAGAGGCATCAAGACAGGGAGATGTGTATAGTTATGGGATTCTTGTATTGGAAATGTTCACAGGAAGGAGGCCCACCGATGAAATGTTCATAGACGGTTTGAAACTCCGCGACTTTGTTAAGATGGCATTACCAGGAAGGCTTGTGCAGATTGTGGACGCTGCTCTTCTCGCCACCCTAGAAGAGACAGCTCCTACAGCAACTGCAGGAAATGAAGTGAACTACATGCGTAGAGGTCATAACAATGAAATTGAAGCAGAAGAGGAAAATAGAGATTATGAGAACCTAAGCAAGATGGACACAAGTGTGTGGAAGTGTATACATTCAATCTTTGAGATAGGACTGGCGTGCTCGGAGGAATCACCAAAGAATAGAATGTGCATGGAGAATGTCCTCAGGGATCTCCACCGTATACAAATTGCTTACATTGGTGTTGTGATCAATCGAGAGAGACCAAGAAGATAA

Protein Analysis

1023

Amino Acids

112.7

Weight (kDa)

6.15

Isoelectric Point (pI)

37.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 1.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 372 - 457 2.8e-08 Leucine-rich repeat region
LRR_8 PF13855 450 - 508 6.7e-07 Leucine rich repeat
LRR_14 PF23598 470 - 581 3.3e-07 Leucine-rich repeat region
LRR_8 PF13855 521 - 580 5.7e-08 Leucine rich repeat
Pkinase PF00069 686 - 896 3.9e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 687 - 898 2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 959
Acc36I ACCTGC 1 cut(s) 1470
Acc65I GGTACC 1 cut(s) 1750
AccB1I GGYRCC 4 cut(s) 623, 1169, 1750, 2208
AccB7I CCANNNNNTGG 2 cut(s) 443, 1331
AccI GTMKAC 3 cut(s) 2088, 2926, 3019
AccII CGCG 1 cut(s) 2718
AccIII TCCGGA 1 cut(s) 889
AciI CCGC 5 cut(s) 237, 726, 771, 1818, 2716
AclI AACGTT 1 cut(s) 573
AclWI GGATC 7 cut(s) 900, 1096, 1240, 1253, 2074, 2344, 3015
AcsI RAATTY 5 cut(s) 146, 1533, 1677, 1832, 2267
AcuI CTGAAG 1 cut(s) 1505
AcvI CACGTG 1 cut(s) 1402
AfaI GTAC 6 cut(s) 764, 831, 1643, 1752, 2263, 2597
AfiI CCNNNNNNNGG 8 cut(s) 311, 443, 515, 731, 1000, 1331, 1468, 1760
AflIII ACRYGT 1 cut(s) 1399
AjnI CCWGG 2 cut(s) 17, 2740
AleI CACNNNNGTG 1 cut(s) 2912
Alw21I GWGCWC 2 cut(s) 2057, 2960
Alw26I GTCTC 3 cut(s) 1429, 2786, 3052
AlwI GGATC 7 cut(s) 900, 1096, 1240, 1253, 2074, 2344, 3015
AlwNI CAGNNNCTG 1 cut(s) 2810
Ama87I CYCGRG 1 cut(s) 1148
Aor13HI TCCGGA 1 cut(s) 889
AoxI GGCC 5 cut(s) 589, 733, 1144, 2160, 2678
ApeKI GCWGC 6 cut(s) 978, 1204, 2238, 2320, 2585, 2768
ApoI RAATTY 5 cut(s) 146, 1533, 1677, 1832, 2267
AseI ATTAAT 1 cut(s) 825
Asp700I GAANNNNTTC 3 cut(s) 83, 523, 934
Asp718I GGTACC 1 cut(s) 1750
AspLEI GCGC 1 cut(s) 1784
AspS9I GGNCC 4 cut(s) 333, 1144, 2160, 2679
AsuC2I CCSGG 1 cut(s) 383
AsuHPI GGTGA 7 cut(s) 294, 466, 1562, 1757, 1832, 2504, 2961
AsuII TTCGAA 1 cut(s) 1771
AvaI CYCGRG 1 cut(s) 1148
AvaII GGWCC 1 cut(s) 333
AxyI CCTNAGG 1 cut(s) 3002
BamHI GGATCC 1 cut(s) 1245
BanI GGYRCC 4 cut(s) 623, 1169, 1750, 2208
BarI GAAGNNNNNNTAC 4 cut(s) 1594, 1626, 1734, 1766
BbrPI CACGTG 1 cut(s) 1402
BbsI GAAGAC 1 cut(s) 1628
Bbv12I GWGCWC 2 cut(s) 2057, 2960
BbvI GCAGC 6 cut(s) 990, 1191, 2225, 2307, 2572, 2755
BccI CCATC 6 cut(s) 69, 344, 805, 1258, 2725, 2896
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 2 cut(s) 19, 2742
BciVI GTATCC 1 cut(s) 982
BclI TGATCA 2 cut(s) 2104, 3045
BcnI CCSGG 1 cut(s) 383
BcoDI GTCTC 3 cut(s) 1429, 2786, 3052
BfaI CTAG 4 cut(s) 176, 548, 926, 2786
BfmI CTRYAG 3 cut(s) 1038, 2802, 2811
BfuAI ACCTGC 1 cut(s) 1470
BfuI GTATCC 1 cut(s) 982
BglII AGATCT 2 cut(s) 883, 2226
BisI GCNGC 7 cut(s) 238, 979, 1205, 2239, 2321, 2586, 2769
BlpI GCTNAGC 1 cut(s) 2503
BlsI GCNGC 7 cut(s) 239, 980, 1206, 2240, 2322, 2587, 2770
Bme1390I CCNGG 3 cut(s) 19, 383, 2742
Bme18I GGWCC 1 cut(s) 333
BmeT110I CYCGRG 1 cut(s) 1148
BmgT120I GGNCC 4 cut(s) 333, 1144, 2160, 2679
BmiI GGNNCC 9 cut(s) 295, 625, 1006, 1171, 1247, 1752, 1765, 2161, 2210
BmrFI CCNGG 3 cut(s) 19, 383, 2742
BmsI GCATC 4 cut(s) 256, 510, 1898, 2624
BpiI GAAGAC 1 cut(s) 1628
BpmI CTGGAG 3 cut(s) 881, 2227, 2574
Bpu10I CCTNAGC 1 cut(s) 2894
Bpu1102I GCTNAGC 1 cut(s) 2503
Bpu14I TTCGAA 1 cut(s) 1771
BpuEI CTTGAG 3 cut(s) 226, 482, 497
BpuMI CCSGG 1 cut(s) 383
Bsa29I ATCGAT 1 cut(s) 130
BsaAI YACGTR 1 cut(s) 1402
BsaI GGTCTC 1 cut(s) 3052
BsaJI CCNNGG 7 cut(s) 17, 442, 513, 541, 966, 1140, 1791
BsaWI WCCGGW 3 cut(s) 889, 1526, 2211
BsaXI ACNNNNNCTCC 2 cut(s) 359, 389
Bsc4I CCNNNNNNNGG 8 cut(s) 311, 443, 515, 731, 1000, 1331, 1468, 1760
Bse1I ACTGG 7 cut(s) 224, 316, 898, 990, 1459, 2041, 2955
Bse21I CCTNAGG 1 cut(s) 3002
Bse3DI GCAATG 1 cut(s) 2461
BseAI TCCGGA 1 cut(s) 889
BseBI CCWGG 2 cut(s) 19, 2742
BseCI ATCGAT 1 cut(s) 130
BseDI CCNNGG 7 cut(s) 17, 442, 513, 541, 966, 1140, 1791
BseGI GGATG 4 cut(s) 501, 962, 1787, 1913
BseLI CCNNNNNNNGG 8 cut(s) 311, 443, 515, 731, 1000, 1331, 1468, 1760
BseMI GCAATG 1 cut(s) 2461
BseMII CTCAG 5 cut(s) 380, 833, 919, 1444, 3016
BseNI ACTGG 7 cut(s) 224, 316, 898, 990, 1459, 2041, 2955
BseRI GAGGAG 4 cut(s) 56, 596, 1963, 2327
BseXI GCAGC 6 cut(s) 990, 1191, 2225, 2307, 2572, 2755
BsgI GTGCAG 2 cut(s) 2306, 2774
Bsh1236I CGCG 1 cut(s) 2718
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 5 cut(s) 591, 735, 1146, 2162, 2680
BshNI GGYRCC 4 cut(s) 623, 1169, 1750, 2208
BshVI ATCGAT 1 cut(s) 130
BsiEI CGRYCG 1 cut(s) 130
BsiHKAI GWGCWC 2 cut(s) 2057, 2960
BsiHKCI CYCGRG 1 cut(s) 1148
BsiSI CCGG 5 cut(s) 383, 890, 1527, 2206, 2212
BslI CCNNNNNNNGG 8 cut(s) 311, 443, 515, 731, 1000, 1331, 1468, 1760
BsmAI GTCTC 3 cut(s) 1429, 2786, 3052
BsmI GAATGC 1 cut(s) 2189
BsnI GGCC 5 cut(s) 591, 735, 1146, 2162, 2680
Bso31I GGTCTC 1 cut(s) 3052
BsoBI CYCGRG 1 cut(s) 1148
Bsp119I TTCGAA 1 cut(s) 1771
Bsp1286I GDGCHC 2 cut(s) 2057, 2960
Bsp13I TCCGGA 1 cut(s) 889
Bsp1720I GCTNAGC 1 cut(s) 2503
BspACI CCGC 5 cut(s) 237, 726, 771, 1818, 2716
BspANI GGCC 5 cut(s) 591, 735, 1146, 2162, 2680
BspCNI CTCAG 5 cut(s) 381, 832, 918, 1443, 3015
BspDI ATCGAT 1 cut(s) 130
BspEI TCCGGA 1 cut(s) 889
BspFNI CGCG 1 cut(s) 2718
BspHI TCATGA 2 cut(s) 10, 2407
BspLI GGNNCC 9 cut(s) 295, 625, 1006, 1171, 1247, 1752, 1765, 2161, 2210
BspMAI CTGCAG 1 cut(s) 2815
BspMI ACCTGC 1 cut(s) 1470
BspPI GGATC 7 cut(s) 900, 1096, 1240, 1253, 2074, 2344, 3015
BspQI GCTCTTC 1 cut(s) 2778
BspT104I TTCGAA 1 cut(s) 1771
BspT107I GGYRCC 4 cut(s) 623, 1169, 1750, 2208
BspTNI GGTCTC 1 cut(s) 3052
BsrDI GCAATG 1 cut(s) 2461
BsrI ACTGG 7 cut(s) 224, 316, 898, 990, 1459, 2041, 2955
BssECI CCNNGG 7 cut(s) 17, 442, 513, 541, 966, 1140, 1791
BssNAI GTATAC 3 cut(s) 2089, 2927, 3020
BssT1I CCWWGG 6 cut(s) 442, 513, 541, 966, 1140, 1791
Bst1107I GTATAC 3 cut(s) 2089, 2927, 3020
Bst2UI CCWGG 2 cut(s) 19, 2742
Bst4CI ACNGT 7 cut(s) 416, 619, 1130, 1556, 2179, 2705, 3017
Bst6I CTCTTC 3 cut(s) 2778, 2784, 2862
BstBAI YACGTR 1 cut(s) 1402
BstBI TTCGAA 1 cut(s) 1771
BstC8I GCNNGC 3 cut(s) 1209, 1849, 2956
BstF5I GGATG 4 cut(s) 501, 962, 1787, 1913
BstFNI CGCG 1 cut(s) 2718
BstHHI GCGC 1 cut(s) 1784
BstMAI GTCTC 3 cut(s) 1429, 2786, 3052
BstMCI CGRYCG 1 cut(s) 130
BstMWI GCNNNNNNNGC 5 cut(s) 597, 2079, 2244, 2777, 2804
BstNI CCWGG 2 cut(s) 19, 2742
BstNSI RCATGY 3 cut(s) 745, 1851, 2836
BstSCI CCNGG 3 cut(s) 17, 381, 2740
BstSFI CTRYAG 3 cut(s) 1038, 2802, 2811
BstUI CGCG 1 cut(s) 2718
BstV1I GCAGC 6 cut(s) 990, 1191, 2225, 2307, 2572, 2755
BstV2I GAAGAC 1 cut(s) 1628
BstX2I RGATCY 5 cut(s) 883, 892, 1245, 2226, 3007
BstYI RGATCY 5 cut(s) 883, 892, 1245, 2226, 3007
BstZ17I GTATAC 3 cut(s) 2089, 2927, 3020
Bsu15I ATCGAT 1 cut(s) 130
Bsu36I CCTNAGG 1 cut(s) 3002
BsuI GTATCC 1 cut(s) 982
BsuRI GGCC 5 cut(s) 591, 735, 1146, 2162, 2680
BsuTUI ATCGAT 1 cut(s) 130
BtsCI GGATG 4 cut(s) 501, 962, 1787, 1913
BtsI GCAGTG 1 cut(s) 2434
BtsIMutI CAGTG 5 cut(s) 165, 309, 905, 913, 2434
BveI ACCTGC 1 cut(s) 1470
Cac8I GCNNGC 3 cut(s) 1209, 1849, 2956
CaiI CAGNNNCTG 1 cut(s) 2810
CciI TCATGA 2 cut(s) 10, 2407
CfoI GCGC 1 cut(s) 1784
Cfr13I GGNCC 4 cut(s) 333, 1144, 2160, 2679
ClaI ATCGAT 1 cut(s) 130
CseI GACGC 1 cut(s) 2774
Csp6I GTAC 6 cut(s) 763, 830, 1642, 1751, 2262, 2596
CspCI CAANNNNNGTGG 4 cut(s) 495, 530, 1795, 1830
CviQI GTAC 6 cut(s) 763, 830, 1642, 1751, 2262, 2596
DraI TTTAAA 1 cut(s) 40
Eam1104I CTCTTC 3 cut(s) 2778, 2784, 2862
EarI CTCTTC 3 cut(s) 2778, 2784, 2862
EciI GGCGGA 1 cut(s) 786
Eco130I CCWWGG 6 cut(s) 442, 513, 541, 966, 1140, 1791
Eco147I AGGCCT 1 cut(s) 735
Eco31I GGTCTC 1 cut(s) 3052
Eco32I GATATC 1 cut(s) 1690
Eco47I GGWCC 1 cut(s) 333
Eco57I CTGAAG 1 cut(s) 1505
Eco72I CACGTG 1 cut(s) 1402
Eco81I CCTNAGG 1 cut(s) 3002
Eco88I CYCGRG 1 cut(s) 1148
EcoO109I RGGNCCY 1 cut(s) 2160
EcoRI GAATTC 1 cut(s) 2267
EcoRII CCWGG 2 cut(s) 17, 2740
EcoRV GATATC 1 cut(s) 1690
EcoT14I CCWWGG 6 cut(s) 442, 513, 541, 966, 1140, 1791
ErhI CCWWGG 6 cut(s) 442, 513, 541, 966, 1140, 1791
FalI AAGNNNNNCTT 2 cut(s) 2085, 2117
FauI CCCGC 1 cut(s) 733
FbaI TGATCA 2 cut(s) 2104, 3045
FblI GTMKAC 3 cut(s) 2088, 2926, 3019
Fnu4HI GCNGC 7 cut(s) 238, 979, 1205, 2239, 2321, 2586, 2769
FokI GGATG 4 cut(s) 488, 949, 1774, 1920
Fsp4HI GCNGC 7 cut(s) 238, 979, 1205, 2239, 2321, 2586, 2769
FspBI CTAG 4 cut(s) 176, 548, 926, 2786
GlaI GCGC 1 cut(s) 1783
GluI GCNGC 7 cut(s) 238, 979, 1205, 2239, 2321, 2586, 2769
GsuI CTGGAG 3 cut(s) 881, 2227, 2574
HaeIII GGCC 5 cut(s) 591, 735, 1146, 2162, 2680
HapII CCGG 5 cut(s) 383, 890, 1527, 2206, 2212
HgaI GACGC 1 cut(s) 2774
HhaI GCGC 1 cut(s) 1784
Hin6I GCGC 1 cut(s) 1782
HinP1I GCGC 1 cut(s) 1782
HincII GTYRAC 2 cut(s) 367, 1053
HindII GTYRAC 2 cut(s) 367, 1053
HindIII AAGCTT 1 cut(s) 458
HpaII CCGG 5 cut(s) 383, 890, 1527, 2206, 2212
HphI GGTGA 7 cut(s) 294, 466, 1562, 1757, 1832, 2504, 2961
Hpy188I TCNGA 9 cut(s) 252, 283, 822, 1166, 1513, 1831, 1859, 2052, 2962
Hpy99I CGWCG 1 cut(s) 770
HpyCH4III ACNGT 7 cut(s) 416, 619, 1130, 1556, 2179, 2705, 3017
HpyCH4IV ACGT 4 cut(s) 573, 765, 1401, 2121
HpyF10VI GCNNNNNNNGC 5 cut(s) 597, 2079, 2244, 2777, 2804
HpySE526I ACGT 4 cut(s) 573, 765, 1401, 2121
HspAI GCGC 1 cut(s) 1782
Kpn2I TCCGGA 1 cut(s) 889
KpnI GGTACC 1 cut(s) 1754
Ksp22I TGATCA 2 cut(s) 2104, 3045
LguI GCTCTTC 1 cut(s) 2778
LmnI GCTCC 5 cut(s) 4, 1763, 2246, 2593, 2803
Lsp1109I GCAGC 6 cut(s) 990, 1191, 2225, 2307, 2572, 2755
LweI GCATC 4 cut(s) 256, 510, 1898, 2624
MaeI CTAG 4 cut(s) 176, 548, 926, 2786
MaeII ACGT 4 cut(s) 573, 765, 1401, 2121
MaeIII GTNAC 3 cut(s) 392, 1194, 1550
MfeI CAATTG 3 cut(s) 973, 1274, 2556
MflI RGATCY 5 cut(s) 883, 892, 1245, 2226, 3007
MhlI GDGCHC 2 cut(s) 2057, 2960
MlyI GAGTC 6 cut(s) 194, 400, 689, 1976, 2505, 2540
MmeI TCCRAC 4 cut(s) 1032, 1202, 1338, 1777
MroI TCCGGA 1 cut(s) 889
MroXI GAANNNNTTC 3 cut(s) 83, 523, 934
MseI TTAA 7 cut(s) 39, 663, 708, 825, 1133, 2231, 2727
MslI CAYNNNNRTG 4 cut(s) 758, 2490, 2850, 2912
MspI CCGG 5 cut(s) 383, 890, 1527, 2206, 2212
MspR9I CCNGG 3 cut(s) 19, 383, 2742
MunI CAATTG 3 cut(s) 973, 1274, 2556
Mva1269I GAATGC 1 cut(s) 2189
MvaI CCWGG 2 cut(s) 19, 2742
MvnI CGCG 1 cut(s) 2718
MwoI GCNNNNNNNGC 5 cut(s) 597, 2079, 2244, 2777, 2804
NciI CCSGG 1 cut(s) 383
NlaIV GGNNCC 9 cut(s) 295, 625, 1006, 1171, 1247, 1752, 1765, 2161, 2210
NmuCI GTSAC 2 cut(s) 392, 1550
NspI RCATGY 3 cut(s) 745, 1851, 2836
NspV TTCGAA 1 cut(s) 1771
OliI CACNNNNGTG 1 cut(s) 2912
PaeI GCATGC 1 cut(s) 1851
PaeR7I CTCGAG 1 cut(s) 1148
PagI TCATGA 2 cut(s) 10, 2407
PceI AGGCCT 1 cut(s) 735
PciSI GCTCTTC 1 cut(s) 2778
PctI GAATGC 1 cut(s) 2189
PdmI GAANNNNTTC 3 cut(s) 83, 523, 934
PfeI GAWTC 8 cut(s) 155, 551, 1588, 2043, 2098, 2215, 2647, 2966
PflMI CCANNNNNTGG 2 cut(s) 443, 1331
PkrI GCNGC 7 cut(s) 239, 980, 1206, 2240, 2322, 2587, 2770
Ple19I CGATCG 1 cut(s) 130
PleI GAGTC 6 cut(s) 194, 399, 688, 1976, 2505, 2539
PmaCI CACGTG 1 cut(s) 1402
PmlI CACGTG 1 cut(s) 1402
PpsI GAGTC 6 cut(s) 194, 399, 688, 1976, 2505, 2539
Ppu21I YACGTR 1 cut(s) 1402
PshBI ATTAAT 1 cut(s) 825
PsiI TTATAA 1 cut(s) 959
Psp1406I AACGTT 1 cut(s) 573
Psp6I CCWGG 2 cut(s) 17, 2740
PspCI CACGTG 1 cut(s) 1402
PspGI CCWGG 2 cut(s) 17, 2740
PspN4I GGNNCC 9 cut(s) 295, 625, 1006, 1171, 1247, 1752, 1765, 2161, 2210
PspPI GGNCC 4 cut(s) 333, 1144, 2160, 2679
PspXI VCTCGAGB 1 cut(s) 1148
PsrI GAACNNNNNNTAC 2 cut(s) 849, 881
PstI CTGCAG 1 cut(s) 2815
PstNI CAGNNNCTG 1 cut(s) 2810
PsuI RGATCY 5 cut(s) 883, 892, 1245, 2226, 3007
PvuI CGATCG 1 cut(s) 130
RsaI GTAC 6 cut(s) 764, 831, 1643, 1752, 2263, 2597
RsaNI GTAC 6 cut(s) 763, 830, 1642, 1751, 2262, 2596
RseI CAYNNNNRTG 4 cut(s) 758, 2490, 2850, 2912
SapI GCTCTTC 1 cut(s) 2778
SaqAI TTAA 7 cut(s) 39, 663, 708, 825, 1133, 2231, 2727
SatI GCNGC 7 cut(s) 238, 979, 1205, 2239, 2321, 2586, 2769
Sau96I GGNCC 4 cut(s) 333, 1144, 2160, 2679
SchI GAGTC 6 cut(s) 194, 400, 689, 1976, 2505, 2540
ScrFI CCNGG 3 cut(s) 19, 383, 2742
SduI GDGCHC 2 cut(s) 2057, 2960
SfaNI GCATC 4 cut(s) 256, 510, 1898, 2624
SfcI CTRYAG 3 cut(s) 1038, 2802, 2811
Sfr274I CTCGAG 1 cut(s) 1148
SfuI TTCGAA 1 cut(s) 1771
SinI GGWCC 1 cut(s) 333
SlaI CTCGAG 1 cut(s) 1148
SmiMI CAYNNNNRTG 4 cut(s) 758, 2490, 2850, 2912
SmlI CTYRAG 4 cut(s) 241, 461, 476, 1148
SmoI CTYRAG 4 cut(s) 241, 461, 476, 1148
SphI GCATGC 1 cut(s) 1851
SseBI AGGCCT 1 cut(s) 735
SsiI CCGC 5 cut(s) 237, 726, 771, 1818, 2716
SspI AATATT 3 cut(s) 1492, 1872, 2371
SspMI CTAG 4 cut(s) 176, 548, 926, 2786
StuI AGGCCT 1 cut(s) 735
StyD4I CCNGG 3 cut(s) 17, 381, 2740
StyI CCWWGG 6 cut(s) 442, 513, 541, 966, 1140, 1791
TaaI ACNGT 7 cut(s) 416, 619, 1130, 1556, 2179, 2705, 3017
TaiI ACGT 4 cut(s) 576, 768, 1404, 2124
TaqI TCGA 6 cut(s) 130, 339, 1149, 1771, 1958, 3052
TatI WGTACW 1 cut(s) 829
TauI GCSGC 1 cut(s) 240
TfiI GAWTC 8 cut(s) 155, 551, 1588, 2043, 2098, 2215, 2647, 2966
Tru1I TTAA 7 cut(s) 39, 663, 708, 825, 1133, 2231, 2727
Tru9I TTAA 7 cut(s) 39, 663, 708, 825, 1133, 2231, 2727
TscAI CASTG 5 cut(s) 172, 316, 905, 913, 2441
TseFI GTSAC 2 cut(s) 392, 1550
TseI GCWGC 6 cut(s) 978, 1204, 2238, 2320, 2585, 2768
Tsp45I GTSAC 2 cut(s) 392, 1550
TspGWI ACGGA 2 cut(s) 1258, 2349
TspRI CASTG 5 cut(s) 172, 316, 905, 913, 2441
Van91I CCANNNNNTGG 2 cut(s) 443, 1331
VpaK11BI GGWCC 1 cut(s) 333
VspI ATTAAT 1 cut(s) 825
XapI RAATTY 5 cut(s) 146, 1533, 1677, 1832, 2267
XbaI TCTAGA 1 cut(s) 547
XceI RCATGY 3 cut(s) 745, 1851, 2836
XhoI CTCGAG 1 cut(s) 1148
XmiI GTMKAC 3 cut(s) 2088, 2926, 3019
XmnI GAANNNNTTC 3 cut(s) 83, 523, 934
XspI CTAG 4 cut(s) 176, 548, 926, 2786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.