Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000248

Physical Location & Seq

Genomic Coordinates Reverse (-)

60011488 .. 60015274

Gene Structure 3787 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G031820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGAGAGTTTCACATACCTTCATGTCATCCTTTTCATCAACTTTTTACAACTCACCACTGTTGTAAGTTCATTTGGCAATGAAACCGATCGCTTGGCTTTGCTAAAATTCAAAGATTGCATAGCCTCTGATCCAGATGGGCTGTTGAACTCATGGAATGACTCCGTTTATTACTGCAAATGGCCTGGAATTGCTTGTGGCAGACGGCATCAAAGAGTAACAGCCGTCTACCTACCACACGCTGCTTTGCACGGAACCATATCACCATACATTGGCAACCTCTCCTTTCTTAGGTTCATCAACCTTCAAAACAACAGCTTCTCTAGCAAGATTCCGCAACAAGTTGAACATTTATTCCGGCTCCGACATCTCAATCTCGATACCAACATGTTGGAGGGGGGAATTCCAGTCAACCTGACCTTCTGTGCGGAACTGAGCATCATAAATATTGGACGAAACCGCCTTATCGGCAAAATTCCTTCAGAGATTGGCTCGTTGATGAAGCTTGTGTATCTTGATTTTCAGATAAATAATCTGACAGGAGGCATCCCACCTTCATTGGGAAATCTTTCATCAATCACTGGCAGTATTCCACGCCTCAACATGCCTAATCTCCAAATACTGTACCTTGCCGGAAATGAATTCTCTGGACAAATCCCAGCTTCACTGTCCAATGCTTCTCAGCTTCAAAAGCTTGATTTTGGGGAAAATAATTTTGTTGGCCAACTTCCCGTAACTCTTTATTGGAGGAGAAAAACTCAAAAGAATAAACCGCTATCTGTAGTGCCATCAATCAAATTCCTTCCAAAGGTTTCATACCATACACTTCATCAAGCTACTGGCGGATTCTCTCTAAGCAATCAAATTGGATCAGGAGGTTTTGGCTCTGTATACAAAGGGATTATTGATCAAGAAGAAAACAATGTTGTTGCCATTAAGGTCCTCAACCTTAAAGAGAAAGGAGCTTCTAAGAGTTTCATGGCAGAATGCAATGCACTAAGAAATATCCGGCACAGGAACCTTGTGAAGATCTTAACATGTTGCTCCAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGAATATGTCAAATGGAAGTCTAGAGGAGTGGCTGCACAAAGAAAACCAATCAAGGAGTTTGAACCTTCTTCAAAGACTGAATATTGTTGTTGATGTGGCTTCTGCGTTGTGTTATCTTCATGACCATTGTGAACCACAAATCATTCACTGCGACATTAAGCCGAGCAACGTTCTTCTTGATGATGACATGGTTGCTCATGTTGGTGACTTTGGGTTAGCAAGACTCATCTCAACGATAACGGACTCCTCTCAAAATCAAAGTAGCACAGTTGGGGTAAAAGGAACAATTGGCTATGTTGCTCCAGAGTATGCGAGTGGTGTTGAGCCATCAAGACAAGGGGATGTATATAGTTATGGGGTGTTCGCGTTGCAAATGTTCACAGGAAGAAGACCTATCGACGAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAAGATGGCCATACCAGAAAGAGTGATGGAGATTGTAGATCCTACTCTTCTTGCCACTTTAGAAGAGAGAGCACCTACAACATCACAAAATGTAGTGAATTACATCAGTGGTTACAATAATGAAATCGAAGCAGTTGAAGAAAACATTGACAATGAATATTTAAGCAAGATGAACACTTATGTGTGGAAGTGCATACTTCCAACCCTTAAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGAATGTCTATGGAGGAGGTCCACAGGAAGCTACACCATATAAAAGATGCTTGCACTGGTTATGGCATGGGAAGCAAGGTGTCAATTTTATGTGAGTTATGCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0010065 GO:0010067 GO:0010087 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0048316 GO:0048507 GO:0048508 GO:0048608 GO:0048731 GO:0048856 GO:0061458

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

627

Amino Acids

69.95

Weight (kDa)

6.66

Isoelectric Point (pI)

41.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	28 - 66	3.1e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	90 - 244	3.2e-07	Leucine-rich repeat region
Pkinase	PF00069	284 - 511	6.1e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	285 - 502	1e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000248)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica	MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica	Prupe.2G248300_v2.0.a1
pyrus_communis	pycom01g16800
rosa_chinensis	RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata	RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora	Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii	Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa	Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha	Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana	Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	272
AccI	GTMKAC	2 cut(s)	228, 891
AccII	CGCG	1 cut(s)	1457
AciI	CCGC	5 cut(s)	335, 428, 460, 773, 843
AclI	AACGTT	1 cut(s)	1260
AclWI	GGATC	3 cut(s)	125, 877, 1562
AcoI	YGGCCR	2 cut(s)	721, 1536
AcsI	RAATTY	5 cut(s)	107, 402, 474, 641, 797
AcuI	CTGAAG	1 cut(s)	465
AfaI	GTAC	1 cut(s)	626
AfiI	CCNNNNNNNGG	4 cut(s)	272, 291, 560, 808
AflII	CTTAAG	1 cut(s)	1736
AflIII	ACRYGT	2 cut(s)	387, 1037
AjnI	CCWGG	1 cut(s)	184
AleI	CACNNNNGTG	1 cut(s)	1709
AloI	GAACNNNNNNTCC	2 cut(s)	339, 371
AluBI	AGCT	9 cut(s)	318, 505, 662, 685, 694, 836, 965, 1079, 1807
AluI	AGCT	9 cut(s)	318, 505, 662, 685, 694, 836, 965, 1079, 1807
Alw21I	GWGCWC	1 cut(s)	1603
AlwI	GGATC	3 cut(s)	125, 877, 1562
AoxI	GGCC	3 cut(s)	182, 721, 1536
ApeKI	GCWGC	2 cut(s)	242, 1123
ApoI	RAATTY	5 cut(s)	107, 402, 474, 641, 797
Asp700I	GAANNNNTTC	1 cut(s)	568
AspS9I	GGNCC	2 cut(s)	940, 1795
AsuHPI	GGTGA	4 cut(s)	46, 255, 1307, 1758
AvaII	GGWCC	2 cut(s)	940, 1795
BalI	TGGCCA	2 cut(s)	723, 1538
BbsI	GAAGAC	1 cut(s)	1486
Bbv12I	GWGCWC	1 cut(s)	1603
BbvI	GCAGC	2 cut(s)	229, 1110
BccI	CCATC	5 cut(s)	131, 796, 1426, 1528, 1549
BceAI	ACGGC	2 cut(s)	209, 221
BciT130I	CCWGG	1 cut(s)	186
BclI	TGATCA	1 cut(s)	907
BfaI	CTAG	3 cut(s)	324, 1082, 1112
BfmI	CTRYAG	1 cut(s)	780
BfrI	CTTAAG	1 cut(s)	1736
BglI	GCCNNNNNGGC	1 cut(s)	468
BglII	AGATCT	1 cut(s)	1029
BisI	GCNGC	2 cut(s)	243, 1124
BlsI	GCNGC	2 cut(s)	244, 1125
Bme1390I	CCNGG	1 cut(s)	186
Bme18I	GGWCC	2 cut(s)	940, 1795
BmgT120I	GGNCC	2 cut(s)	940, 1795
BmiI	GGNNCC	3 cut(s)	256, 362, 1019
BmrFI	CCNGG	1 cut(s)	186
BmsI	GCATC	4 cut(s)	217, 447, 555, 1813
BpiI	GAAGAC	1 cut(s)	1486
BplI	GAGNNNNNCTC	4 cut(s)	476, 508, 742, 774
BpmI	CTGGAG	2 cut(s)	1030, 1377
BsaJI	CCNNGG	1 cut(s)	1769
Bsc4I	CCNNNNNNNGG	4 cut(s)	272, 291, 560, 808
Bse1I	ACTGG	4 cut(s)	407, 586, 844, 1837
Bse3DI	GCAATG	2 cut(s)	85, 997
BseBI	CCWGG	1 cut(s)	186
BseDI	CCNNGG	1 cut(s)	1769
BseGI	GGATG	3 cut(s)	27, 546, 1438
BseLI	CCNNNNNNNGG	4 cut(s)	272, 291, 560, 808
BseMI	GCAATG	2 cut(s)	85, 997
BseMII	CTCAG	2 cut(s)	425, 695
BseNI	ACTGG	4 cut(s)	407, 586, 844, 1837
BseRI	GAGGAG	4 cut(s)	763, 1130, 1327, 1805
BseXI	GCAGC	2 cut(s)	229, 1110
BseYI	CCCAGC	1 cut(s)	658
BsgI	GTGCAG	1 cut(s)	1109
Bsh1236I	CGCG	1 cut(s)	1457
Bsh1285I	CGRYCG	1 cut(s)	91
BshFI	GGCC	3 cut(s)	184, 723, 1538
BsiEI	CGRYCG	1 cut(s)	91
BsiHKAI	GWGCWC	1 cut(s)	1603
BsiSI	CCGG	3 cut(s)	358, 633, 1009
BslI	CCNNNNNNNGG	4 cut(s)	272, 291, 560, 808
BsmI	GAATGC	1 cut(s)	992
BsnI	GGCC	3 cut(s)	184, 723, 1538
Bsp1286I	GDGCHC	1 cut(s)	1603
Bsp143I	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
BspACI	CCGC	5 cut(s)	335, 428, 460, 773, 843
BspANI	GGCC	3 cut(s)	184, 723, 1538
BspCNI	CTCAG	2 cut(s)	426, 694
BspFNI	CGCG	1 cut(s)	1457
BspHI	TCATGA	1 cut(s)	1210
BspLI	GGNNCC	3 cut(s)	256, 362, 1019
BspPI	GGATC	3 cut(s)	125, 877, 1562
BspTI	CTTAAG	1 cut(s)	1736
BsrDI	GCAATG	2 cut(s)	85, 997
BsrI	ACTGG	4 cut(s)	407, 586, 844, 1837
BssECI	CCNNGG	1 cut(s)	1769
BssMI	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
BssNAI	GTATAC	1 cut(s)	892
BssT1I	CCWWGG	1 cut(s)	1769
Bst1107I	GTATAC	1 cut(s)	892
Bst2UI	CCWGG	1 cut(s)	186
Bst4CI	ACNGT	4 cut(s)	61, 624, 669, 1360
Bst6I	CTCTTC	2 cut(s)	1581, 1587
BstAFI	CTTAAG	1 cut(s)	1736
BstC8I	GCNNGC	2 cut(s)	1753, 1828
BstDEI	CTNAG	6 cut(s)	290, 434, 681, 854, 969, 998
BstENI	CCTNNNNNAGG	2 cut(s)	289, 806
BstF5I	GGATG	3 cut(s)	27, 546, 1438
BstFNI	CGCG	1 cut(s)	1457
BstKTI	GATC	6 cut(s)	91, 133, 872, 910, 1032, 1570
BstMBI	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
BstMCI	CGRYCG	1 cut(s)	91
BstMWI	GCNNNNNNNGC	4 cut(s)	324, 468, 691, 1848
BstNI	CCWGG	1 cut(s)	186
BstNSI	RCATGY	4 cut(s)	391, 607, 1041, 1755
BstSCI	CCNGG	1 cut(s)	184
BstSFI	CTRYAG	1 cut(s)	780
BstUI	CGCG	1 cut(s)	1457
BstV1I	GCAGC	2 cut(s)	229, 1110
BstV2I	GAAGAC	1 cut(s)	1486
BstX2I	RGATCY	2 cut(s)	1029, 1567
BstXI	CCANNNNNNTGG	1 cut(s)	391
BstYI	RGATCY	2 cut(s)	1029, 1567
BstZ17I	GTATAC	1 cut(s)	892
BsuRI	GGCC	3 cut(s)	184, 723, 1538
BtsCI	GGATG	3 cut(s)	27, 546, 1438
BtsI	GCAGTG	1 cut(s)	1237
BtsIMutI	CAGTG	6 cut(s)	57, 579, 665, 1237, 1642, 1830
Cac8I	GCNNGC	2 cut(s)	1753, 1828
CciI	TCATGA	1 cut(s)	1210
Cfr13I	GGNCC	2 cut(s)	940, 1795
Csp6I	GTAC	1 cut(s)	625
CspCI	CAANNNNNGTGG	2 cut(s)	540, 575
CviQI	GTAC	1 cut(s)	625
DdeI	CTNAG	6 cut(s)	290, 434, 681, 854, 969, 998
DpnI	GATC	6 cut(s)	90, 132, 871, 909, 1031, 1569
DpnII	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
DraI	TTTAAA	1 cut(s)	1501
EaeI	YGGCCR	2 cut(s)	721, 1536
Eam1104I	CTCTTC	2 cut(s)	1581, 1587
EarI	CTCTTC	2 cut(s)	1581, 1587
EciI	GGCGGA	1 cut(s)	858
Eco130I	CCWWGG	1 cut(s)	1769
Eco47I	GGWCC	2 cut(s)	940, 1795
Eco57I	CTGAAG	1 cut(s)	465
EcoNI	CCTNNNNNAGG	2 cut(s)	289, 806
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRI	GAATTC	2 cut(s)	402, 641
EcoRII	CCWGG	1 cut(s)	184
EcoT14I	CCWWGG	1 cut(s)	1769
ErhI	CCWWGG	1 cut(s)	1769
FbaI	TGATCA	1 cut(s)	907
FblI	GTMKAC	2 cut(s)	228, 891
Fnu4HI	GCNGC	2 cut(s)	243, 1124
FokI	GGATG	3 cut(s)	14, 533, 1445
Fsp4HI	GCNGC	2 cut(s)	243, 1124
FspBI	CTAG	3 cut(s)	324, 1082, 1112
GluI	GCNGC	2 cut(s)	243, 1124
GsaI	CCCAGC	1 cut(s)	662
GsuI	CTGGAG	2 cut(s)	1030, 1377
HaeIII	GGCC	3 cut(s)	184, 723, 1538
HapII	CCGG	3 cut(s)	358, 633, 1009
HincII	GTYRAC	1 cut(s)	412
HindII	GTYRAC	1 cut(s)	412
HindIII	AAGCTT	2 cut(s)	503, 692
HinfI	GANTC	6 cut(s)	161, 331, 846, 1314, 1334, 1763
HpaII	CCGG	3 cut(s)	358, 633, 1009
HphI	GGTGA	4 cut(s)	46, 255, 1307, 1758
Hpy166II	GTNNAC	6 cut(s)	229, 412, 892, 1223, 1470, 1798
Hpy188I	TCNGA	6 cut(s)	130, 365, 484, 525, 537, 1759
Hpy8I	GTNNAC	6 cut(s)	229, 412, 892, 1223, 1470, 1798
Hpy99I	CGWCG	1 cut(s)	1493
HpyAV	CCTTC	7 cut(s)	29, 314, 430, 489, 564, 812, 1166
HpyCH4III	ACNGT	4 cut(s)	61, 624, 669, 1360
HpyCH4IV	ACGT	1 cut(s)	1260
HpyF10VI	GCNNNNNNNGC	4 cut(s)	324, 468, 691, 1848
HpyF3I	CTNAG	6 cut(s)	290, 434, 681, 854, 969, 998
HpySE526I	ACGT	1 cut(s)	1260
Ksp22I	TGATCA	1 cut(s)	907
Kzo9I	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
LmnI	GCTCC	4 cut(s)	366, 962, 1049, 1396
Lsp1109I	GCAGC	2 cut(s)	229, 1110
LweI	GCATC	4 cut(s)	217, 447, 555, 1813
MaeI	CTAG	3 cut(s)	324, 1082, 1112
MaeII	ACGT	1 cut(s)	1260
MaeIII	GTNAC	4 cut(s)	217, 733, 1295, 1640
MalI	GATC	6 cut(s)	90, 132, 871, 909, 1031, 1569
MboI	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
MfeI	CAATTG	1 cut(s)	1377
MflI	RGATCY	2 cut(s)	1029, 1567
MhlI	GDGCHC	1 cut(s)	1603
MlsI	TGGCCA	2 cut(s)	723, 1538
MluNI	TGGCCA	2 cut(s)	723, 1538
MlyI	GAGTC	3 cut(s)	155, 1308, 1328
MmeI	TCCRAC	3 cut(s)	372, 388, 1754
Mox20I	TGGCCA	2 cut(s)	723, 1538
MroXI	GAANNNNTTC	1 cut(s)	568
MscI	TGGCCA	2 cut(s)	723, 1538
MseI	TTAA	7 cut(s)	936, 951, 1034, 1248, 1500, 1691, 1737
MslI	CAYNNNNRTG	2 cut(s)	1293, 1709
Msp20I	TGGCCA	2 cut(s)	723, 1538
MspCI	CTTAAG	1 cut(s)	1736
MspI	CCGG	3 cut(s)	358, 633, 1009
MspR9I	CCNGG	1 cut(s)	186
MunI	CAATTG	1 cut(s)	1377
Mva1269I	GAATGC	1 cut(s)	992
MvaI	CCWGG	1 cut(s)	186
MvnI	CGCG	1 cut(s)	1457
MwoI	GCNNNNNNNGC	4 cut(s)	324, 468, 691, 1848
NdeII	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
NlaIV	GGNNCC	3 cut(s)	256, 362, 1019
NmeAIII	GCCGAG	1 cut(s)	1278
NmuCI	GTSAC	1 cut(s)	1295
NspI	RCATGY	4 cut(s)	391, 607, 1041, 1755
OliI	CACNNNNGTG	1 cut(s)	1709
PaeI	GCATGC	1 cut(s)	1755
PagI	TCATGA	1 cut(s)	1210
PciI	ACATGT	2 cut(s)	387, 1037
PctI	GAATGC	1 cut(s)	992
PdmI	GAANNNNTTC	1 cut(s)	568
PfeI	GAWTC	3 cut(s)	331, 846, 1763
PflMI	CCANNNNNTGG	1 cut(s)	272
PkrI	GCNGC	2 cut(s)	244, 1125
Ple19I	CGATCG	1 cut(s)	91
PleI	GAGTC	3 cut(s)	155, 1308, 1328
PpsI	GAGTC	3 cut(s)	155, 1308, 1328
PpuMI	RGGWCCY	1 cut(s)	940
PscI	ACATGT	2 cut(s)	387, 1037
Psp1406I	AACGTT	1 cut(s)	1260
Psp5II	RGGWCCY	1 cut(s)	940
Psp6I	CCWGG	1 cut(s)	184
PspFI	CCCAGC	1 cut(s)	658
PspGI	CCWGG	1 cut(s)	184
PspN4I	GGNNCC	3 cut(s)	256, 362, 1019
PspPI	GGNCC	2 cut(s)	940, 1795
PspPPI	RGGWCCY	1 cut(s)	940
PsuI	RGATCY	2 cut(s)	1029, 1567
PvuI	CGATCG	1 cut(s)	91
RsaI	GTAC	1 cut(s)	626
RsaNI	GTAC	1 cut(s)	625
RseI	CAYNNNNRTG	2 cut(s)	1293, 1709
SaqAI	TTAA	7 cut(s)	936, 951, 1034, 1248, 1500, 1691, 1737
SatI	GCNGC	2 cut(s)	243, 1124
Sau3AI	GATC	6 cut(s)	88, 130, 869, 907, 1029, 1567
Sau96I	GGNCC	2 cut(s)	940, 1795
SchI	GAGTC	3 cut(s)	155, 1308, 1328
ScrFI	CCNGG	1 cut(s)	186
SduI	GDGCHC	1 cut(s)	1603
SfaNI	GCATC	4 cut(s)	217, 447, 555, 1813
SfcI	CTRYAG	1 cut(s)	780
SinI	GGWCC	2 cut(s)	940, 1795
SmiMI	CAYNNNNRTG	2 cut(s)	1293, 1709
SmlI	CTYRAG	1 cut(s)	1736
SmoI	CTYRAG	1 cut(s)	1736
SphI	GCATGC	1 cut(s)	1755
SsiI	CCGC	5 cut(s)	335, 428, 460, 773, 843
SspI	AATATT	3 cut(s)	448, 1174, 1688
SspMI	CTAG	3 cut(s)	324, 1082, 1112
StyD4I	CCNGG	1 cut(s)	184
StyI	CCWWGG	1 cut(s)	1769
TaaI	ACNGT	4 cut(s)	61, 624, 669, 1360
TaiI	ACGT	1 cut(s)	1263
TaqI	TCGA	3 cut(s)	378, 1488, 1656
TfiI	GAWTC	3 cut(s)	331, 846, 1763
Tru1I	TTAA	7 cut(s)	936, 951, 1034, 1248, 1500, 1691, 1737
Tru9I	TTAA	7 cut(s)	936, 951, 1034, 1248, 1500, 1691, 1737
TscAI	CASTG	6 cut(s)	64, 586, 672, 1244, 1642, 1837
TseFI	GTSAC	1 cut(s)	1295
TseI	GCWGC	2 cut(s)	242, 1123
Tsp45I	GTSAC	1 cut(s)	1295
TspGWI	ACGGA	3 cut(s)	154, 267, 1346
TspRI	CASTG	6 cut(s)	64, 586, 672, 1244, 1642, 1837
Van91I	CCANNNNNTGG	1 cut(s)	272
Vha464I	CTTAAG	1 cut(s)	1736
VpaK11BI	GGWCC	2 cut(s)	940, 1795
XagI	CCTNNNNNAGG	2 cut(s)	289, 806
XapI	RAATTY	5 cut(s)	107, 402, 474, 641, 797
XbaI	TCTAGA	1 cut(s)	1111
XceI	RCATGY	4 cut(s)	391, 607, 1041, 1755
XmiI	GTMKAC	2 cut(s)	228, 891
XmnI	GAANNNNTTC	1 cut(s)	568
XspI	CTAG	3 cut(s)	324, 1082, 1112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.