RLG00000002548
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
36138000 .. 36141287
3288 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002548

Sequence Viewer

Length: 2583 bp
ATGTTGGAGGGGGAAATTCTGGTCAACCTGACCTTCTGTCCTGATCTGAGCATCATAAGTTTTGGAATAAACCACCTTACAGGTGAAATTCCTTCAGAGATGGGCTCATTCACGAAGCTCATTTATCTGAATCTAGAGACAAACAATCTGACAGGAGGCATCCCACCTTCCTTGGGAAATCTTTCATCACTCACACTGCTGTCCTTAGTATATAACAATTTGGTGGGCAATGTTCCAGAGGAGATAGGACGACTGCAAAGCTTATCTACATTTTATATTGGTGCCAATAACCTCTCTGGTATGATTCCTGCCCCCATTTTTAACATATCATCTATGACCCTCTTCTCAATCACAGCTAATGCGTTTAGGGGCACTTTACCACCCGCCATGGGCCTAAACATGCCTAATCTACAAAAAGTTTCCCTTGGTGGAAATGAATTCTCTGGGCAAATTCCTGATTCTTTGCCCTCCAATGCTTCTCAGCTTCAGTTGTTTGATATTTCGAAGAATAATTTTGTGGGCCAAGTTCCTGCAAACTTTGGAAATCTTCCCAAGCTGCAGTTGCTAGTCGTAGGGTCGAATAATCTAGGAACTAATTCATCTAATGATTTGGGATTTATAGCATCCTTGAAAAATTGCAGCAATCTGAATATTCTTGATATAGGTTATAACAGTTTTGGAGGTGTTTTACCAAACTCTATAGCCAACTTGTCAACCCAATTGACTTACCTCTACCTTGGAGGGATTCTTGTAACAGGAATCATTCCTGCAACATTAGAAAATCTCCACAATTTGATAATCTTGGGCTTGGAGAATAACCTATTCAGAGGAGTCATTCCTGCTTCTTTTGGGAAATTACGAATGCTGCAATACATGAGACTATCAGAAAATAGGCTTAGTGGAGATATACCACCGCAGGTTATTGGTCTTTCCTCACTTCTCTATCTCAGGTTATCACAAAACTCGTTTACTGGCAAGTTGCCTGTAGAAGTGGGTAAGCTGAAGAATATCAATAAACTGGACGTCTCTGATAATAATTTGACTGGAGAAATTCCAGAAGTTATTGGACATTGTCTGAGCCTTGAATTTCTTGTACTACAAGGGAATCTCTTTCAAGGAACCATCCCTTCTTCTTTGGCTTCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGAAACAACTTGTCAGGATATATTCCAAAAGACCTACAGAGACTTCCATTCTTGATATATTTGAACCTTTCGTTCAATAGTCTGGAGGGTGAGGTGCCAAAAGAAGGAGTATTTCGAAACACAACCGCAATAACATTGGTTGGAAACACAAACCTTTGCGGTGGTGTTTCGGAATTGCAACTACCAGCATGCCCCATCGAAGTCCCAAAGCGGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACAATTTCTTCAATCACCGGATGCTCTCTTCTGTTTGCAATCATCTTAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAAGAAACCATTATCTGCAGAGTCATCAATCAACTTCCTTTCAAAAGTTTCATACCAAACACTTCATCAAGCTACTGCTGGATTCTCTCCGAGTAATCAAATTGGATCCGGCAGTTTTGGCTCTGTATACAAAGGGATTCTTGCTCAAGAAGAAAACAATGTTGTTGCCATAAAGGTCCTCAACCTTCAACATAAAGAAGCTTCTAAGAGTTTTGTGGCTGAATGCAATGCACTGAGAAATATCCGGCACAGGAATCTTGTGAAGATCTTAACATGTTGCTCCAGCACGGATTACAATGGTAATGACTTTAAAGCTCTAGTGTTTGAATACATGTCAAATGGAAGCTTAGAGGAGTGGCTGCACAGTGAAGACCAATCAAGGAGCTTGAACCTTCTTCAAAGATTGAGTATTTCTATCGATGTGGCTTCTGCATTATGTTATCTTCATGACTATTGTGAACCACAAATCATTCATCGTGACATAAAGCCAAGCAACGTTCTTCTTGACGATGACAAGGTTGCTCATGTCGGTGATTTTGGGCTAGCAAGACTCATCCCAACTACCATCGACTCCTCTGAAAATCAAAGTAGCACAATTGGAATAAAGGGAACAATCGGCTACACTGCTCCAGAGTATGCAAGTGGTGTTGAGGCATCAAGACAAGGAGATGTATATAGTTATGGGATCCTTGTATTGGAAATGTTCACGGGAAGAAGACGCACCGATGAAATGTTCAAAGACGGTTTGAATCTCCACAACTTCGTTAAGATGGCAATACCAGGAAGAATTGTGCAGATTGTGGACCCTGCTCTTCTCACCACTGGAGAAGTGACAGCTCATGCAGCAGCAAAAAACAAAGTGAACTACATGCTTAGAGGTTATAACAATGAAATTGAAGCAGAAGAGGAAAATAGAGATTATGAGAACCTAAGCAAGATGGACACGCATGTGTGGAATTGTATACATTCAATCTTTGAGATAGGACTGGCGTGCTCGGAGGAATCACCAAAGAATAGAATGTGTATGGAGGATGTCATCAGAGACCTCCACCATGTACAAAATGCTTTCAGTGGTGCTGAGATCAGTTGA

Protein Analysis

861

Amino Acids

94.22

Weight (kDa)

6.06

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 240 - 299 9.8e-08 Leucine rich repeat
LRR_14 PF23598 309 - 420 3.2e-09 Leucine-rich repeat region
LRR_8 PF13855 361 - 419 1.1e-08 Leucine rich repeat
Pkinase PF00069 529 - 740 3.5e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 530 - 742 4.4e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 669, 2376
AatII GACGTC 1 cut(s) 1026
Acc36I ACCTGC 1 cut(s) 907
AccB1I GGYRCC 2 cut(s) 281, 1267
AccI GTMKAC 2 cut(s) 1620, 2455
AciI CCGC 5 cut(s) 384, 914, 1299, 1332, 1384
AclI AACGTT 1 cut(s) 1989
AclWI GGATC 4 cut(s) 1593, 1606, 2173, 2186
AcsI RAATTY 6 cut(s) 15, 87, 437, 450, 1050, 1085
AcuI CTGAAG 4 cut(s) 78, 470, 1022, 1139
AcyI GRCGYC 1 cut(s) 1023
AfaI GTAC 2 cut(s) 1095, 2550
AfiI CCNNNNNNNGG 4 cut(s) 173, 389, 1277, 2188
AflIII ACRYGT 2 cut(s) 1766, 1824
AhdI GACNNNNNGTC 1 cut(s) 36
AjnI CCWGG 1 cut(s) 2272
AleI CACNNNNGTG 1 cut(s) 2441
Alw21I GWGCWC 1 cut(s) 2489
Alw26I GTCTC 5 cut(s) 131, 871, 1030, 1207, 2529
AlwI GGATC 4 cut(s) 1593, 1606, 2173, 2186
AoxI GGCC 2 cut(s) 391, 520
ApeKI GCWGC 6 cut(s) 556, 639, 865, 1852, 2336, 2339
ApoI RAATTY 6 cut(s) 15, 87, 437, 450, 1050, 1085
Asp700I GAANNNNTTC 2 cut(s) 181, 595
AspS9I GGNCC 4 cut(s) 391, 520, 1669, 2296
AsuHPI GGTGA 6 cut(s) 95, 1274, 1423, 2036, 2302, 2490
AsuII TTCGAA 2 cut(s) 503, 1288
AsuNHI GCTAGC 1 cut(s) 2035
AvaII GGWCC 2 cut(s) 1669, 2296
BaeGI GKGCMC 1 cut(s) 374
BamHI GGATCC 2 cut(s) 1598, 2178
BanI GGYRCC 2 cut(s) 281, 1267
BanII GRGCYC 1 cut(s) 107
BbsI GAAGAC 3 cut(s) 1145, 1869, 2215
Bbv12I GWGCWC 1 cut(s) 2489
BbvI GCAGC 6 cut(s) 543, 651, 852, 1839, 2348, 2351
BccI CCATC 6 cut(s) 94, 1130, 1376, 2066, 2257, 2425
BciT130I CCWGG 1 cut(s) 2274
BcoDI GTCTC 5 cut(s) 131, 871, 1030, 1207, 2529
BfaI CTAG 6 cut(s) 134, 566, 587, 1163, 1811, 2036
BfmI CTRYAG 5 cut(s) 557, 699, 984, 1208, 1509
BfuAI ACCTGC 1 cut(s) 907
BglII AGATCT 2 cut(s) 1165, 1758
BisI GCNGC 6 cut(s) 557, 640, 866, 1853, 2337, 2340
BlsI GCNGC 6 cut(s) 558, 641, 867, 1854, 2338, 2341
Bme1390I CCNGG 1 cut(s) 2274
Bme18I GGWCC 2 cut(s) 1669, 2296
BmeRI GACNNNNNGTC 1 cut(s) 36
BmgT120I GGNCC 4 cut(s) 391, 520, 1669, 2296
BmiI GGNNCC 6 cut(s) 283, 1120, 1269, 1600, 2180, 2298
BmrFI CCNGG 1 cut(s) 2274
BmsI GCATC 5 cut(s) 60, 168, 632, 1427, 2156
BmtI GCTAGC 1 cut(s) 2039
BpiI GAAGAC 3 cut(s) 1145, 1869, 2215
BplI GAGNNNNNCTC 4 cut(s) 89, 121, 1471, 1503
BpmI CTGGAG 5 cut(s) 1065, 1277, 1759, 2106, 2337
Bpu10I CCTNAGC 1 cut(s) 2423
Bpu14I TTCGAA 2 cut(s) 503, 1288
BpuEI CTTGAG 1 cut(s) 1623
Bsa29I ATCGAT 1 cut(s) 1911
BsaHI GRCGYC 1 cut(s) 1023
BsaI GGTCTC 1 cut(s) 2529
BsaJI CCNNGG 4 cut(s) 171, 387, 424, 736
BsaWI WCCGGW 1 cut(s) 1433
Bsc4I CCNNNNNNNGG 4 cut(s) 173, 389, 1277, 2188
Bse1I ACTGG 5 cut(s) 976, 1023, 1048, 2320, 2484
Bse3DI GCAATG 2 cut(s) 235, 1726
BseBI CCWGG 1 cut(s) 2274
BseCI ATCGAT 1 cut(s) 1911
BseDI CCNNGG 4 cut(s) 171, 387, 424, 736
BseGI GGATG 6 cut(s) 159, 623, 1122, 1442, 2046, 2530
BseLI CCNNNNNNNGG 4 cut(s) 173, 389, 1277, 2188
BseMI GCAATG 2 cut(s) 235, 1726
BseMII CTCAG 6 cut(s) 38, 494, 961, 1067, 1718, 2562
BseNI ACTGG 5 cut(s) 976, 1023, 1048, 2320, 2484
BseRI GAGGAG 5 cut(s) 254, 843, 1492, 1859, 2056
BseSI GKGCMC 1 cut(s) 374
BseXI GCAGC 6 cut(s) 543, 651, 852, 1839, 2348, 2351
BsgI GTGCAG 2 cut(s) 1838, 2306
BshFI GGCC 2 cut(s) 393, 522
BshNI GGYRCC 2 cut(s) 281, 1267
BshVI ATCGAT 1 cut(s) 1911
BsiHKAI GWGCWC 1 cut(s) 2489
BsiSI CCGG 3 cut(s) 1434, 1602, 1738
BslFI GGGAC 1 cut(s) 1361
BslI CCNNNNNNNGG 4 cut(s) 173, 389, 1277, 2188
BsmAI GTCTC 5 cut(s) 131, 871, 1030, 1207, 2529
BsmBI CGTCTC 1 cut(s) 1030
BsmFI GGGAC 1 cut(s) 1361
BsmI GAATGC 2 cut(s) 867, 1721
BsnI GGCC 2 cut(s) 393, 522
Bso31I GGTCTC 1 cut(s) 2529
Bsp119I TTCGAA 2 cut(s) 503, 1288
Bsp1286I GDGCHC 3 cut(s) 107, 374, 2489
Bsp1407I TGTACA 1 cut(s) 2548
Bsp143I GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
Bsp19I CCATGG 1 cut(s) 387
BspACI CCGC 5 cut(s) 384, 914, 1299, 1332, 1384
BspANI GGCC 2 cut(s) 393, 522
BspCNI CTCAG 6 cut(s) 39, 493, 960, 1068, 1719, 2563
BspDI ATCGAT 1 cut(s) 1911
BspHI TCATGA 1 cut(s) 1939
BspLI GGNNCC 6 cut(s) 283, 1120, 1269, 1600, 2180, 2298
BspMAI CTGCAG 2 cut(s) 561, 1513
BspMI ACCTGC 1 cut(s) 907
BspOI GCTAGC 1 cut(s) 2039
BspPI GGATC 4 cut(s) 1593, 1606, 2173, 2186
BspQI GCTCTTC 1 cut(s) 2310
BspT104I TTCGAA 2 cut(s) 503, 1288
BspT107I GGYRCC 2 cut(s) 281, 1267
BspTNI GGTCTC 1 cut(s) 2529
BsrDI GCAATG 2 cut(s) 235, 1726
BsrGI TGTACA 1 cut(s) 2548
BsrI ACTGG 5 cut(s) 976, 1023, 1048, 2320, 2484
BssECI CCNNGG 4 cut(s) 171, 387, 424, 736
BssMI GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
BssNAI GTATAC 2 cut(s) 1621, 2456
BssNI GRCGYC 1 cut(s) 1023
BssT1I CCWWGG 4 cut(s) 171, 387, 424, 736
Bst1107I GTATAC 2 cut(s) 1621, 2456
Bst2UI CCWGG 1 cut(s) 2274
Bst4CI ACNGT 3 cut(s) 674, 1859, 2237
Bst6I CTCTTC 4 cut(s) 347, 1449, 2310, 2391
BstACI GRCGYC 1 cut(s) 1023
BstAUI TGTACA 1 cut(s) 2548
BstBI TTCGAA 2 cut(s) 503, 1288
BstC8I GCNNGC 3 cut(s) 1363, 2037, 2485
BstDSI CCRYGG 1 cut(s) 387
BstF5I GGATG 6 cut(s) 159, 623, 1122, 1442, 2046, 2530
BstKTI GATC 6 cut(s) 46, 1168, 1601, 1761, 2181, 2577
BstMAI GTCTC 5 cut(s) 131, 871, 1030, 1207, 2529
BstMBI GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
BstMWI GCNNNNNNNGC 3 cut(s) 562, 1611, 2336
BstNI CCWGG 1 cut(s) 2274
BstNSI RCATGY 6 cut(s) 403, 1365, 1770, 1828, 2365, 2444
BstSCI CCNGG 1 cut(s) 2272
BstSFI CTRYAG 5 cut(s) 557, 699, 984, 1208, 1509
BstSLI GKGCMC 1 cut(s) 374
BstV1I GCAGC 6 cut(s) 543, 651, 852, 1839, 2348, 2351
BstV2I GAAGAC 3 cut(s) 1145, 1869, 2215
BstX2I RGATCY 4 cut(s) 1165, 1598, 1758, 2178
BstYI RGATCY 4 cut(s) 1165, 1598, 1758, 2178
BstZ17I GTATAC 2 cut(s) 1621, 2456
Bsu15I ATCGAT 1 cut(s) 1911
BsuRI GGCC 2 cut(s) 393, 522
BsuTUI ATCGAT 1 cut(s) 1911
BtgI CCRYGG 1 cut(s) 387
BtsCI GGATG 6 cut(s) 159, 623, 1122, 1442, 2046, 2530
BtsI GCAGTG 2 cut(s) 194, 2115
BtsIMutI CAGTG 6 cut(s) 194, 1724, 1864, 2115, 2313, 2569
BveI ACCTGC 1 cut(s) 907
Cac8I GCNNGC 3 cut(s) 1363, 2037, 2485
CciI TCATGA 1 cut(s) 1939
Cfr13I GGNCC 4 cut(s) 391, 520, 1669, 2296
ClaI ATCGAT 1 cut(s) 1911
CseI GACGC 1 cut(s) 2220
Csp6I GTAC 2 cut(s) 1094, 2549
CspCI CAANNNNNGTGG 2 cut(s) 153, 188
CviQI GTAC 2 cut(s) 1094, 2549
DpnI GATC 6 cut(s) 45, 1167, 1600, 1760, 2180, 2576
DpnII GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
DraI TTTAAA 1 cut(s) 1804
DriI GACNNNNNGTC 1 cut(s) 36
Eam1104I CTCTTC 4 cut(s) 347, 1449, 2310, 2391
Eam1105I GACNNNNNGTC 1 cut(s) 36
EarI CTCTTC 4 cut(s) 347, 1449, 2310, 2391
Eco130I CCWWGG 4 cut(s) 171, 387, 424, 736
Eco24I GRGCYC 1 cut(s) 107
Eco31I GGTCTC 1 cut(s) 2529
Eco47I GGWCC 2 cut(s) 1669, 2296
Eco57I CTGAAG 4 cut(s) 78, 470, 1022, 1139
EcoO109I RGGNCCY 1 cut(s) 1669
EcoRI GAATTC 1 cut(s) 437
EcoRII CCWGG 1 cut(s) 2272
EcoT14I CCWWGG 4 cut(s) 171, 387, 424, 736
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 4 cut(s) 171, 387, 424, 736
Esp3I CGTCTC 1 cut(s) 1030
FalI AAGNNNNNCTT 4 cut(s) 408, 440, 1617, 1649
FaqI GGGAC 1 cut(s) 1361
FauI CCCGC 1 cut(s) 391
FblI GTMKAC 2 cut(s) 1620, 2455
Fnu4HI GCNGC 6 cut(s) 557, 640, 866, 1853, 2337, 2340
FokI GGATG 6 cut(s) 146, 610, 1109, 1449, 2033, 2537
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 6 cut(s) 557, 640, 866, 1853, 2337, 2340
FspBI CTAG 6 cut(s) 134, 566, 587, 1163, 1811, 2036
GluI GCNGC 6 cut(s) 557, 640, 866, 1853, 2337, 2340
GsuI CTGGAG 5 cut(s) 1065, 1277, 1759, 2106, 2337
HaeIII GGCC 2 cut(s) 393, 522
HapII CCGG 3 cut(s) 1434, 1602, 1738
HgaI GACGC 1 cut(s) 2220
Hin1I GRCGYC 1 cut(s) 1023
HincII GTYRAC 2 cut(s) 25, 714
HindII GTYRAC 2 cut(s) 25, 714
HindIII AAGCTT 3 cut(s) 259, 1692, 1837
HpaII CCGG 3 cut(s) 1434, 1602, 1738
HphI GGTGA 6 cut(s) 95, 1274, 1423, 2036, 2302, 2490
HpyAV CCTTC 7 cut(s) 43, 102, 177, 1137, 1271, 1688, 1895
HpyCH4III ACNGT 3 cut(s) 674, 1859, 2237
HpyCH4IV ACGT 2 cut(s) 1023, 1989
HpyF10VI GCNNNNNNNGC 3 cut(s) 562, 1611, 2336
HpySE526I ACGT 2 cut(s) 1023, 1989
Hsp92I GRCGYC 1 cut(s) 1023
Kzo9I GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
LguI GCTCTTC 1 cut(s) 2310
LmnI GCTCC 3 cut(s) 1778, 1875, 2125
Lsp1109I GCAGC 6 cut(s) 543, 651, 852, 1839, 2348, 2351
LweI GCATC 5 cut(s) 60, 168, 632, 1427, 2156
MaeI CTAG 6 cut(s) 134, 566, 587, 1163, 1811, 2036
MaeII ACGT 2 cut(s) 1023, 1989
MaeIII GTNAC 3 cut(s) 751, 1970, 2323
MalI GATC 6 cut(s) 45, 1167, 1600, 1760, 2180, 2576
MboI GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
MfeI CAATTG 2 cut(s) 719, 2088
MflI RGATCY 4 cut(s) 1165, 1598, 1758, 2178
MhlI GDGCHC 3 cut(s) 107, 374, 2489
MlyI GAGTC 4 cut(s) 840, 1523, 2037, 2057
MmeI TCCRAC 1 cut(s) 1294
MroXI GAANNNNTTC 2 cut(s) 181, 595
MseI TTAA 4 cut(s) 321, 1763, 1803, 2259
MslI CAYNNNNRTG 2 cut(s) 2022, 2441
MspI CCGG 3 cut(s) 1434, 1602, 1738
MspR9I CCNGG 1 cut(s) 2274
MunI CAATTG 2 cut(s) 719, 2088
Mva1269I GAATGC 2 cut(s) 867, 1721
MvaI CCWGG 1 cut(s) 2274
MwoI GCNNNNNNNGC 3 cut(s) 562, 1611, 2336
NcoI CCATGG 1 cut(s) 387
NdeII GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
NheI GCTAGC 1 cut(s) 2035
NlaIV GGNNCC 6 cut(s) 283, 1120, 1269, 1600, 2180, 2298
NmuCI GTSAC 2 cut(s) 1970, 2323
NspI RCATGY 6 cut(s) 403, 1365, 1770, 1828, 2365, 2444
NspV TTCGAA 2 cut(s) 503, 1288
OliI CACNNNNGTG 1 cut(s) 2441
PaeI GCATGC 1 cut(s) 1365
PagI TCATGA 1 cut(s) 1939
PciI ACATGT 2 cut(s) 1766, 1824
PciSI GCTCTTC 1 cut(s) 2310
PctI GAATGC 2 cut(s) 867, 1721
PdmI GAANNNNTTC 2 cut(s) 181, 595
PflFI GACNNNGTC 1 cut(s) 1071
PkrI GCNGC 6 cut(s) 558, 641, 867, 1854, 2338, 2341
PleI GAGTC 4 cut(s) 839, 1522, 2037, 2057
PpsI GAGTC 4 cut(s) 839, 1522, 2037, 2057
PpuMI RGGWCCY 1 cut(s) 1669
PscI ACATGT 2 cut(s) 1766, 1824
PsiI TTATAA 2 cut(s) 669, 2376
Psp1406I AACGTT 1 cut(s) 1989
Psp5II RGGWCCY 1 cut(s) 1669
Psp6I CCWGG 1 cut(s) 2272
PspGI CCWGG 1 cut(s) 2272
PspN4I GGNNCC 6 cut(s) 283, 1120, 1269, 1600, 2180, 2298
PspPI GGNCC 4 cut(s) 391, 520, 1669, 2296
PspPPI RGGWCCY 1 cut(s) 1669
PstI CTGCAG 2 cut(s) 561, 1513
PsuI RGATCY 4 cut(s) 1165, 1598, 1758, 2178
PsyI GACNNNGTC 1 cut(s) 1071
RsaI GTAC 2 cut(s) 1095, 2550
RsaNI GTAC 2 cut(s) 1094, 2549
RseI CAYNNNNRTG 2 cut(s) 2022, 2441
SapI GCTCTTC 1 cut(s) 2310
SaqAI TTAA 4 cut(s) 321, 1763, 1803, 2259
SatI GCNGC 6 cut(s) 557, 640, 866, 1853, 2337, 2340
Sau3AI GATC 6 cut(s) 43, 1165, 1598, 1758, 2178, 2574
Sau96I GGNCC 4 cut(s) 391, 520, 1669, 2296
SchI GAGTC 4 cut(s) 840, 1523, 2037, 2057
ScrFI CCNGG 1 cut(s) 2274
SduI GDGCHC 3 cut(s) 107, 374, 2489
SfaNI GCATC 5 cut(s) 60, 168, 632, 1427, 2156
SfcI CTRYAG 5 cut(s) 557, 699, 984, 1208, 1509
SfuI TTCGAA 2 cut(s) 503, 1288
SinI GGWCC 2 cut(s) 1669, 2296
SmiMI CAYNNNNRTG 2 cut(s) 2022, 2441
SmlI CTYRAG 1 cut(s) 1638
SmoI CTYRAG 1 cut(s) 1638
SphI GCATGC 1 cut(s) 1365
SsiI CCGC 5 cut(s) 384, 914, 1299, 1332, 1384
SspI AATATT 1 cut(s) 652
SspMI CTAG 6 cut(s) 134, 566, 587, 1163, 1811, 2036
StyD4I CCNGG 1 cut(s) 2272
StyI CCWWGG 4 cut(s) 171, 387, 424, 736
TaaI ACNGT 3 cut(s) 674, 1859, 2237
TaiI ACGT 2 cut(s) 1026, 1992
TaqI TCGA 6 cut(s) 503, 578, 1288, 1371, 1911, 2061
TatI WGTACW 2 cut(s) 1093, 2548
Tru1I TTAA 4 cut(s) 321, 1763, 1803, 2259
Tru9I TTAA 4 cut(s) 321, 1763, 1803, 2259
TscAI CASTG 6 cut(s) 201, 1731, 1864, 2122, 2320, 2569
TseFI GTSAC 2 cut(s) 1970, 2323
TseI GCWGC 6 cut(s) 556, 639, 865, 1852, 2336, 2339
Tsp45I GTSAC 2 cut(s) 1970, 2323
TspDTI ATGAA 9 cut(s) 174, 450, 588, 1533, 1547, 1928, 1955, 2235, 2397
TspGWI ACGGA 1 cut(s) 1796
TspRI CASTG 6 cut(s) 201, 1731, 1864, 2122, 2320, 2569
Tth111I GACNNNGTC 1 cut(s) 1071
VpaK11BI GGWCC 2 cut(s) 1669, 2296
XapI RAATTY 6 cut(s) 15, 87, 437, 450, 1050, 1085
XbaI TCTAGA 2 cut(s) 133, 1162
XceI RCATGY 6 cut(s) 403, 1365, 1770, 1828, 2365, 2444
XmiI GTMKAC 2 cut(s) 1620, 2455
XmnI GAANNNNTTC 2 cut(s) 181, 595
XspI CTAG 6 cut(s) 134, 566, 587, 1163, 1811, 2036
ZraI GACGTC 1 cut(s) 1024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.