Rw1G008190
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
17576522 .. 17580095
3574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G008190.1

Sequence Viewer

Length: 3126 bp
ATGGATAGCTTCATAAACCTTCACGTCCTGACCCTTATCCTTTTCATCGCCTTTTTCCAACCTACCACTGTTGTACGTGCATTTGGCAATGAAACCGATCGCTTGGCTTTGCTGAAATTCAAAGATTGCATAGCCACCGACCCACATGGGCTGTTGAGCTCATCATGGAATGACTCCATTCACTTCTGCAAATGGCAAGGAATTAATTGTGGCAGACGGCATCAAAGAGTAACAGCCTTAAACCTACCAGACGGCGATTTGCATGGAACCATATCACCTTACATTGGCAACCTCTCCTTTCTTAGGTTCATCAACCTTCAGAATAACAGCTTTGCTGGCAAGATTCCACAACAAGTTGATCATTTGTTCCGACTGCGACATCTCAATCTAAGTTTCAACCTATTGGAAGGGGGAATTCCAGTCAACCTGACCTTCTGCTCGAAATTAAGCATCATAAGCATCGGACCAAACCGCCTTACCGGGAAAATTCCTTCAGAGATTGGGACATTGAAGAAGCCTGTGTGTCTTAATCTTCAGAAAAACAATTTGATAGGAGTTATCCCACCTTCCTTGGGAAATCTCTCATCAATCACTATACTTCACTTGGCAGTTAACAATTTGGTGGGCAACATACCAGAGGAAATAGGCCGGTTGAGAAGCTTAACTCACTTTGGAATTGGTCCCAATAACCTCTCTGGTACGATACCTCCCTCCCTTTTTAACATATCATCTATGATCGTCTTCTCACTTCCAGTTAATAAGCTTAAGGGCAGTATTCCACCTGGTATAGGCCTAAACATGCCTAATCTCCAAATAGTGTACCTTGGTGAAAATGAATTCTCTGGGAAAATCCCAGTTTCTTTTGCCAATGCTTCTCAGCTTCAGATACTTGATATTGGGGATAATAATTTTGTTGGGTCAGTTCCCATAAGTTTTGGAAATCTTCCCCGTCTTCGGTGGCTCAGCTTTGCAATGAATAATCTAGGAACCTCTAATGATTTGGGGTTTATAACATTATTGACAAATTGCAGCAATCTGGAAGTGCTTGTTCTGAGTTTAAACAATTTTGGAGGTGTTTTACCCAACTCTGTTGCCAATTTATCATCCCAACTGACTCAACTCTACCTTGGGGGAAATCAAATAGGGGGATCGATTCCTGAAACATTGGAAAATCTCAACAATTTAATACTCTTGGGACTGGATAATAACTTGTTCACAGGTGTCATTCCAGCATCTTTTGGGAAGTTACAAAACCTGCAAACATTATATTTAGATTACAATAGATTATCAGGACGGATCCCATCTTCCCTAGGAAACCTCTCCCAATTGTTTCAACTCTACTTAGTCGCTAATAAATTAGAGGGAACAGTTCCTTCGGCTATTGGAAATTGCCAAAATTTGCAGTTTATGGAAATATCACAGAATAGGCTTAGAGGACATATACCACCACAGGTTATTGGTCTTTCCTCCTTATCTATTCTTCTCAACTTATCACAGAACTCACTAACAGGCAGTCTTCCTCTAGAAGTAGGTAAGCTAAACAATATCAATGCAGTAGACATTTCCCAAAATAATTTGACAGGAGAAATCCCAGAAACCATTGGAAACTGTCTGAGCCTTGAATTTCTCAACCTTCAAGGGAATCTCTTTCAAGGAATCATACCATCTTCTATGGCTTCCTTGAAAGGTCTCCAACATTTAGATCTTTCACGGAACAACTTGTCAGGACATATTCCAAAGAACCTACAGAAACTTCCATTCTTGATATATTTGGACCTTTCGTCAAATAACTTGGAGGGTGAGGTACCGGAAGAAGGAGTTTTTCGAAACATAAGTGCAATATCATTGGCTGGAAATGCCAAACTTTGTGGTGGTATTTCAAAATTGCAGCTTCCAGCATGCCCCACCAAAGCACCAAAGCAGAGAAAGTTGCATGGTTTCAAAGTGAAGTTCACAATTTCTTTAGTCGTCGGATGCTCTCTTCTGTTTGCAGTCTTCCTAGCTCTTTATTGGAGGAGAAAAACTGAAAAGAATAAACCATTATCTACAGTGTCATCAATCAACTTCCTTCCGAAGGTTTCATACCAGACACTTCATCAAGCTACTGGCGGATTCTCTCCAAGCAATCAAATAGGATCAGGCGGTTTTGGCTCTGTATACAAAGGTATTCTTGATCAAGAAGAAAACAATGTTGTTGCCATAAAGGTCCTCAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTTGTGGCAGAATGTAATGCACTGAGAAATATCAGGCATAGGAATCTTGTGAAGATCTTAACTTGCTGCTCCAGCACAGATTACAATGACAATGAATTCAAAGCTCTAGTTTTTGAATTTATGTCAAATGGGAGTTTAGAGGACTGGTTGCATATAGAAAACCAATCAAGGAGCTTGAACCTTCTTGAAAGACTGAATATTGCTGTTGATGTGGCTTCTGCATTGTGTTATCTTCATAACCATTGTGAACCACAAATCATTCACTGCGATTTGAAGCCCAGCAACATTCTTCTTGATGATGACATGGTTGCTCATGTAAGTGATTTTGGGTTAGCAAGACTCATCTCAACGACCGCGGACTCCTCCCAAAATCAAAGTAGCACAGTTCGAATAAAGGGAACCATTGGCTATGCTGCTCCAGAGTACGCGAGTGGTGTTAAGCCATCAGGACAAGGGGATGTATATAGTTATGGGGTCTTCGTGTTGCAAATGTTTACAGGAAGAAGACCTATCGATGAAATATTTAAAGAGGGTTTGAATCTCCATAACTTTGTCAAGATGGGCATATCAGAAAAACTAATGCAGATTGTGGATCCTACTCTTCTTGCCAGTTTAGAAGAGACAGCACCTGCAACAACAAAAAATGAAGTAAACTACAACAATGAAATTGAAGCAGATGAAGAAAACATTGACAATGAAAATTTCAGCAAGATGAACACTTATGTGTGGAAGTGCATACTTCCAACCCTTAAGATTGGACTTGCATGCTCAGAAGAATCACCAAGAAATAGGATGTCTATGGAGGAGGTCCATAGGGAGTTACACCATATAAAAAATGCTTGCACTAGTGTTGACATCCGTCGACAGAGGCCAAGAAGAAGCTAA

Protein Analysis

1041

Amino Acids

114.31

Weight (kDa)

8.26

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 70 8.8e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 93 - 226 8.2e-07 Leucine-rich repeat region
LRR_8 PF13855 268 - 328 1.7e-06 Leucine rich repeat
LRR_14 PF23598 387 - 617 2.5e-16 Leucine-rich repeat region
LRR_8 PF13855 395 - 453 4.6e-09 Leucine rich repeat
LRR_8 PF13855 540 - 598 4.5e-08 Leucine rich repeat
Pkinase PF00069 708 - 933 8.3e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 709 - 923 3.5e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1010
AarI CACCTGC 1 cut(s) 2878
Acc36I ACCTGC 2 cut(s) 1263, 2878
Acc65I GGTACC 1 cut(s) 1804
AccB1I GGYRCC 1 cut(s) 1804
AccI GTMKAC 3 cut(s) 1557, 2157, 3103
AccII CGCG 2 cut(s) 2597, 2669
AciI CCGC 5 cut(s) 472, 2109, 2142, 2595, 2597
AclWI GGATC 6 cut(s) 1156, 1291, 1304, 2143, 2828, 2841
AcsI RAATTY 9 cut(s) 116, 414, 486, 836, 1396, 1622, 2336, 2357, 2941
AcuI CTGAAG 4 cut(s) 302, 477, 518, 866
AfaI GTAC 5 cut(s) 75, 700, 821, 1806, 2666
AfiI CCNNNNNNNGG 7 cut(s) 284, 303, 572, 788, 954, 1814, 2074
AflII CTTAAG 2 cut(s) 764, 2990
AhdI GACNNNNNGTC 1 cut(s) 1780
AhlI ACTAGT 1 cut(s) 3086
AjiI CACGTC 1 cut(s) 25
AjnI CCWGG 1 cut(s) 781
AleI CACNNNNGTG 1 cut(s) 2963
Alw21I GWGCWC 1 cut(s) 161
Alw26I GTCTC 2 cut(s) 1694, 2855
AlwI GGATC 6 cut(s) 1156, 1291, 1304, 2143, 2828, 2841
AlwNI CAGNNNCTG 1 cut(s) 2870
AoxI GGCC 3 cut(s) 646, 790, 3110
ApeKI GCWGC 4 cut(s) 1029, 1888, 2307, 2654
ApoI RAATTY 9 cut(s) 116, 414, 486, 836, 1396, 1622, 2336, 2357, 2941
AseI ATTAAT 1 cut(s) 204
Asp718I GGTACC 1 cut(s) 1804
AspA2I CCTAGG 1 cut(s) 1309
AspS9I GGNCC 5 cut(s) 464, 680, 1774, 2206, 3049
AsuC2I CCSGG 1 cut(s) 481
AsuHPI GGTGA 4 cut(s) 267, 839, 1811, 3012
AsuII TTCGAA 2 cut(s) 1825, 2629
AvaII GGWCC 5 cut(s) 464, 680, 1774, 2206, 3049
AvrII CCTAGG 1 cut(s) 1309
BamHI GGATCC 2 cut(s) 1296, 2833
BanI GGYRCC 1 cut(s) 1804
BanII GRGCYC 1 cut(s) 161
BarI GAAGNNNNNNTAC 2 cut(s) 2066, 2098
BbsI GAAGAC 6 cut(s) 733, 944, 1508, 1987, 2710, 2752
Bbv12I GWGCWC 1 cut(s) 161
BbvI GCAGC 4 cut(s) 1041, 1900, 2294, 2641
BccI CCATC 4 cut(s) 1309, 1672, 2692, 2794
BceAI ACGGC 2 cut(s) 233, 268
BciT130I CCWGG 1 cut(s) 783
BclI TGATCA 2 cut(s) 358, 2173
BcnI CCSGG 1 cut(s) 481
BcoDI GTCTC 2 cut(s) 1694, 2855
BcuI ACTAGT 1 cut(s) 3086
BfaI CTAG 6 cut(s) 983, 1310, 1523, 2000, 2348, 3087
BfmI CTRYAG 2 cut(s) 1745, 2046
BfrI CTTAAG 2 cut(s) 764, 2990
BfuAI ACCTGC 2 cut(s) 1263, 2878
BglII AGATCT 2 cut(s) 1702, 2295
BisI GCNGC 4 cut(s) 1030, 1889, 2308, 2655
BlnI CCTAGG 1 cut(s) 1309
BlpI GCTNAGC 1 cut(s) 962
BlsI GCNGC 4 cut(s) 1031, 1890, 2309, 2656
Bme1390I CCNGG 2 cut(s) 481, 783
Bme18I GGWCC 5 cut(s) 464, 680, 1774, 2206, 3049
BmeRI GACNNNNNGTC 1 cut(s) 1780
BmgBI CACGTC 1 cut(s) 25
BmgT120I GGNCC 5 cut(s) 464, 680, 1774, 2206, 3049
BmiI GGNNCC 7 cut(s) 268, 682, 988, 1298, 1806, 2641, 2835
BmrFI CCNGG 2 cut(s) 481, 783
BmrI ACTGGG 1 cut(s) 848
BmsI GCATC 5 cut(s) 229, 459, 468, 1241, 1964
BmuI ACTGGG 1 cut(s) 848
BoxI GACNNNNGTC 1 cut(s) 3099
BpiI GAAGAC 6 cut(s) 733, 944, 1508, 1987, 2710, 2752
BpmI CTGGAG 2 cut(s) 2296, 2643
Bpu1102I GCTNAGC 1 cut(s) 962
Bpu14I TTCGAA 2 cut(s) 1825, 2629
BpuMI CCSGG 1 cut(s) 481
Bsa29I ATCGAT 2 cut(s) 1151, 2754
BsaAI YACGTR 1 cut(s) 77
BsaI GGTCTC 1 cut(s) 1694
BsaJI CCNNGG 5 cut(s) 570, 823, 1126, 1309, 2595
BsaWI WCCGGW 1 cut(s) 1807
BsaXI ACNNNNNCTCC 2 cut(s) 691, 721
Bsc4I CCNNNNNNNGG 7 cut(s) 284, 303, 572, 788, 954, 1814, 2074
Bse118I RCCGGY 1 cut(s) 648
Bse1I ACTGG 7 cut(s) 419, 752, 854, 1203, 2110, 2390, 2850
Bse3DI GCAATG 2 cut(s) 94, 978
BseBI CCWGG 1 cut(s) 783
BseCI ATCGAT 2 cut(s) 1151, 2754
BseDI CCNNGG 5 cut(s) 570, 823, 1126, 1309, 2595
BseGI GGATG 5 cut(s) 1103, 1979, 2704, 3039, 3096
BseLI CCNNNNNNNGG 7 cut(s) 284, 303, 572, 788, 954, 1814, 2074
BseMI GCAATG 2 cut(s) 94, 978
BseMII CTCAG 6 cut(s) 890, 976, 1043, 1604, 2255, 3024
BseNI ACTGG 7 cut(s) 419, 752, 854, 1203, 2110, 2390, 2850
BseRI GAGGAG 3 cut(s) 2029, 2593, 3059
BseXI GCAGC 4 cut(s) 1041, 1900, 2294, 2641
BseYI CCCAGC 1 cut(s) 2519
Bsh1236I CGCG 2 cut(s) 2597, 2669
Bsh1285I CGRYCG 2 cut(s) 100, 2595
BshFI GGCC 3 cut(s) 648, 792, 3112
BshNI GGYRCC 1 cut(s) 1804
BshVI ATCGAT 2 cut(s) 1151, 2754
BsiEI CGRYCG 2 cut(s) 100, 2595
BsiHKAI GWGCWC 1 cut(s) 161
BsiSI CCGG 3 cut(s) 480, 649, 1808
BslFI GGGAC 3 cut(s) 517, 666, 1209
BslI CCNNNNNNNGG 7 cut(s) 284, 303, 572, 788, 954, 1814, 2074
BsmAI GTCTC 2 cut(s) 1694, 2855
BsmFI GGGAC 3 cut(s) 517, 666, 1209
BsnI GGCC 3 cut(s) 648, 792, 3112
Bso31I GGTCTC 1 cut(s) 1694
Bsp119I TTCGAA 2 cut(s) 1825, 2629
Bsp1286I GDGCHC 1 cut(s) 161
Bsp1720I GCTNAGC 1 cut(s) 962
BspACI CCGC 5 cut(s) 472, 2109, 2142, 2595, 2597
BspANI GGCC 3 cut(s) 648, 792, 3112
BspCNI CTCAG 6 cut(s) 889, 975, 1044, 1605, 2256, 3023
BspDI ATCGAT 2 cut(s) 1151, 2754
BspFNI CGCG 2 cut(s) 2597, 2669
BspLI GGNNCC 7 cut(s) 268, 682, 988, 1298, 1806, 2641, 2835
BspMI ACCTGC 2 cut(s) 1263, 2878
BspPI GGATC 6 cut(s) 1156, 1291, 1304, 2143, 2828, 2841
BspT104I TTCGAA 2 cut(s) 1825, 2629
BspT107I GGYRCC 1 cut(s) 1804
BspTI CTTAAG 2 cut(s) 764, 2990
BspTNI GGTCTC 1 cut(s) 1694
BsrDI GCAATG 2 cut(s) 94, 978
BsrFI RCCGGY 1 cut(s) 648
BsrI ACTGG 7 cut(s) 419, 752, 854, 1203, 2110, 2390, 2850
BssAI RCCGGY 1 cut(s) 648
BssECI CCNNGG 5 cut(s) 570, 823, 1126, 1309, 2595
BssNAI GTATAC 1 cut(s) 2158
BssT1I CCWWGG 4 cut(s) 570, 823, 1126, 1309
Bst1107I GTATAC 1 cut(s) 2158
Bst2UI CCWGG 1 cut(s) 783
Bst4CI ACNGT 5 cut(s) 70, 1369, 1610, 2050, 2626
Bst6I CTCTTC 3 cut(s) 1986, 2847, 2853
BstAFI CTTAAG 2 cut(s) 764, 2990
BstBAI YACGTR 1 cut(s) 77
BstBI TTCGAA 2 cut(s) 1825, 2629
BstC8I GCNNGC 4 cut(s) 337, 1900, 3007, 3082
BstDSI CCRYGG 1 cut(s) 2595
BstENI CCTNNNNNAGG 3 cut(s) 301, 786, 2072
BstF5I GGATG 5 cut(s) 1103, 1979, 2704, 3039, 3096
BstFNI CGCG 2 cut(s) 2597, 2669
BstMAI GTCTC 2 cut(s) 1694, 2855
BstMCI CGRYCG 2 cut(s) 100, 2595
BstMWI GCNNNNNNNGC 5 cut(s) 336, 456, 1856, 2148, 2313
BstNI CCWGG 1 cut(s) 783
BstNSI RCATGY 3 cut(s) 802, 1902, 3009
BstPAI GACNNNNGTC 1 cut(s) 3099
BstSCI CCNGG 2 cut(s) 479, 781
BstSFI CTRYAG 2 cut(s) 1745, 2046
BstUI CGCG 2 cut(s) 2597, 2669
BstV1I GCAGC 4 cut(s) 1041, 1900, 2294, 2641
BstV2I GAAGAC 6 cut(s) 733, 944, 1508, 1987, 2710, 2752
BstX2I RGATCY 4 cut(s) 1296, 1702, 2295, 2833
BstYI RGATCY 4 cut(s) 1296, 1702, 2295, 2833
BstZ17I GTATAC 1 cut(s) 2158
Bsu15I ATCGAT 2 cut(s) 1151, 2754
BsuRI GGCC 3 cut(s) 648, 792, 3112
BsuTUI ATCGAT 2 cut(s) 1151, 2754
BtgI CCRYGG 1 cut(s) 2595
BtgZI GCGATG 1 cut(s) 31
BtrI CACGTC 1 cut(s) 25
BtsCI GGATG 5 cut(s) 1103, 1979, 2704, 3039, 3096
BtsI GCAGTG 1 cut(s) 2503
BtsIMutI CAGTG 4 cut(s) 66, 2055, 2261, 2503
BveI ACCTGC 2 cut(s) 1263, 2878
Cac8I GCNNGC 4 cut(s) 337, 1900, 3007, 3082
CaiI CAGNNNCTG 1 cut(s) 2870
Cfr10I RCCGGY 1 cut(s) 648
Cfr13I GGNCC 5 cut(s) 464, 680, 1774, 2206, 3049
Cfr42I CCGCGG 1 cut(s) 2598
ClaI ATCGAT 2 cut(s) 1151, 2754
CsiI ACCWGGT 1 cut(s) 781
Csp6I GTAC 5 cut(s) 74, 699, 820, 1805, 2665
CspCI CAANNNNNGTGG 4 cut(s) 552, 587, 1849, 1884
CviAII CATG 9 cut(s) 146, 165, 263, 799, 1899, 1934, 2545, 2555, 3006
CviQI GTAC 5 cut(s) 74, 699, 820, 1805, 2665
DraI TTTAAA 2 cut(s) 1059, 2767
DriI GACNNNNNGTC 1 cut(s) 1780
Eam1104I CTCTTC 3 cut(s) 1986, 2847, 2853
Eam1105I GACNNNNNGTC 1 cut(s) 1780
EarI CTCTTC 3 cut(s) 1986, 2847, 2853
EciI GGCGGA 1 cut(s) 2124
Ecl136II GAGCTC 1 cut(s) 159
Eco130I CCWWGG 4 cut(s) 570, 823, 1126, 1309
Eco147I AGGCCT 1 cut(s) 792
Eco24I GRGCYC 1 cut(s) 161
Eco31I GGTCTC 1 cut(s) 1694
Eco47I GGWCC 5 cut(s) 464, 680, 1774, 2206, 3049
Eco53kI GAGCTC 1 cut(s) 159
Eco57I CTGAAG 4 cut(s) 302, 477, 518, 866
EcoICRI GAGCTC 1 cut(s) 159
EcoNI CCTNNNNNAGG 3 cut(s) 301, 786, 2072
EcoO109I RGGNCCY 1 cut(s) 2206
EcoRI GAATTC 3 cut(s) 414, 836, 2336
EcoRII CCWGG 1 cut(s) 781
EcoT14I CCWWGG 4 cut(s) 570, 823, 1126, 1309
EcoT38I GRGCYC 1 cut(s) 161
ErhI CCWWGG 4 cut(s) 570, 823, 1126, 1309
FaeI CATG 9 cut(s) 149, 168, 266, 802, 1902, 1937, 2548, 2558, 3009
FalI AAGNNNNNCTT 2 cut(s) 2154, 2186
FaqI GGGAC 3 cut(s) 517, 666, 1209
FatI CATG 9 cut(s) 145, 164, 262, 798, 1898, 1933, 2544, 2554, 3005
FbaI TGATCA 2 cut(s) 358, 2173
FblI GTMKAC 3 cut(s) 1557, 2157, 3103
Fnu4HI GCNGC 4 cut(s) 1030, 1889, 2308, 2655
FokI GGATG 5 cut(s) 1090, 1986, 2711, 3046, 3083
FriOI GRGCYC 1 cut(s) 161
Fsp4HI GCNGC 4 cut(s) 1030, 1889, 2308, 2655
FspBI CTAG 6 cut(s) 983, 1310, 1523, 2000, 2348, 3087
GluI GCNGC 4 cut(s) 1030, 1889, 2308, 2655
GsaI CCCAGC 1 cut(s) 2523
GsuI CTGGAG 2 cut(s) 2296, 2643
HaeIII GGCC 3 cut(s) 648, 792, 3112
HapII CCGG 3 cut(s) 480, 649, 1808
Hin1II CATG 9 cut(s) 149, 168, 266, 802, 1902, 1937, 2548, 2558, 3009
HincII GTYRAC 4 cut(s) 424, 613, 3094, 3104
HindII GTYRAC 4 cut(s) 424, 613, 3094, 3104
HindIII AAGCTT 2 cut(s) 658, 761
HpaI GTTAAC 1 cut(s) 613
HpaII CCGG 3 cut(s) 480, 649, 1808
HphI GGTGA 4 cut(s) 267, 839, 1811, 3012
Hpy99I CGWCG 2 cut(s) 1973, 3105
HpyCH4III ACNGT 5 cut(s) 70, 1369, 1610, 2050, 2626
HpyCH4IV ACGT 2 cut(s) 24, 76
HpyF10VI GCNNNNNNNGC 5 cut(s) 336, 456, 1856, 2148, 2313
HpySE526I ACGT 2 cut(s) 24, 76
Hsp92II CATG 9 cut(s) 149, 168, 266, 802, 1902, 1937, 2548, 2558, 3009
KpnI GGTACC 1 cut(s) 1808
Ksp22I TGATCA 2 cut(s) 358, 2173
KspAI GTTAAC 1 cut(s) 613
KspI CCGCGG 1 cut(s) 2598
LmnI GCTCC 4 cut(s) 2228, 2315, 2412, 2662
Lsp1109I GCAGC 4 cut(s) 1041, 1900, 2294, 2641
LweI GCATC 5 cut(s) 229, 459, 468, 1241, 1964
MabI ACCWGGT 1 cut(s) 781
MaeI CTAG 6 cut(s) 983, 1310, 1523, 2000, 2348, 3087
MaeII ACGT 2 cut(s) 24, 76
MaeIII GTNAC 3 cut(s) 229, 1245, 3060
MfeI CAATTG 1 cut(s) 1325
MflI RGATCY 4 cut(s) 1296, 1702, 2295, 2833
MhlI GDGCHC 1 cut(s) 161
MlyI GAGTC 4 cut(s) 167, 1108, 2574, 2594
MmeI TCCRAC 5 cut(s) 82, 394, 1717, 1951, 3008
MslI CAYNNNNRTG 2 cut(s) 2559, 2963
MspA1I CMGCKG 1 cut(s) 2597
MspCI CTTAAG 2 cut(s) 764, 2990
MspI CCGG 3 cut(s) 480, 649, 1808
MspR9I CCNGG 2 cut(s) 481, 783
MssI GTTTAAAC 1 cut(s) 1059
MunI CAATTG 1 cut(s) 1325
MvaI CCWGG 1 cut(s) 783
MvnI CGCG 2 cut(s) 2597, 2669
MwoI GCNNNNNNNGC 5 cut(s) 336, 456, 1856, 2148, 2313
NciI CCSGG 1 cut(s) 481
NlaIII CATG 9 cut(s) 149, 168, 266, 802, 1902, 1937, 2548, 2558, 3009
NlaIV GGNNCC 7 cut(s) 268, 682, 988, 1298, 1806, 2641, 2835
NspI RCATGY 3 cut(s) 802, 1902, 3009
NspV TTCGAA 2 cut(s) 1825, 2629
OliI CACNNNNGTG 1 cut(s) 2963
PaeI GCATGC 2 cut(s) 1902, 3009
PaqCI CACCTGC 1 cut(s) 2878
PceI AGGCCT 1 cut(s) 792
PfeI GAWTC 8 cut(s) 343, 1153, 1642, 1656, 2112, 2284, 2779, 3017
PkrI GCNGC 4 cut(s) 1031, 1890, 2309, 2656
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 4 cut(s) 167, 1108, 2574, 2594
PmeI GTTTAAAC 1 cut(s) 1059
PpsI GAGTC 4 cut(s) 167, 1108, 2574, 2594
Ppu21I YACGTR 1 cut(s) 77
PpuMI RGGWCCY 1 cut(s) 2206
PshAI GACNNNNGTC 1 cut(s) 3099
PshBI ATTAAT 1 cut(s) 204
PsiI TTATAA 1 cut(s) 1010
Psp124BI GAGCTC 1 cut(s) 161
Psp5II RGGWCCY 1 cut(s) 2206
Psp6I CCWGG 1 cut(s) 781
PspFI CCCAGC 1 cut(s) 2519
PspGI CCWGG 1 cut(s) 781
PspN4I GGNNCC 7 cut(s) 268, 682, 988, 1298, 1806, 2641, 2835
PspPI GGNCC 5 cut(s) 464, 680, 1774, 2206, 3049
PspPPI RGGWCCY 1 cut(s) 2206
PstNI CAGNNNCTG 1 cut(s) 2870
PsuI RGATCY 4 cut(s) 1296, 1702, 2295, 2833
PvuI CGATCG 1 cut(s) 100
RsaI GTAC 5 cut(s) 75, 700, 821, 1806, 2666
RsaNI GTAC 5 cut(s) 74, 699, 820, 1805, 2665
RseI CAYNNNNRTG 2 cut(s) 2559, 2963
SacI GAGCTC 1 cut(s) 161
SacII CCGCGG 1 cut(s) 2598
SalI GTCGAC 1 cut(s) 3102
SatI GCNGC 4 cut(s) 1030, 1889, 2308, 2655
Sau96I GGNCC 5 cut(s) 464, 680, 1774, 2206, 3049
SchI GAGTC 4 cut(s) 167, 1108, 2574, 2594
ScrFI CCNGG 2 cut(s) 481, 783
SduI GDGCHC 1 cut(s) 161
SexAI ACCWGGT 1 cut(s) 781
SfaNI GCATC 5 cut(s) 229, 459, 468, 1241, 1964
SfcI CTRYAG 2 cut(s) 1745, 2046
Sfr303I CCGCGG 1 cut(s) 2598
SfuI TTCGAA 2 cut(s) 1825, 2629
SgrBI CCGCGG 1 cut(s) 2598
SinI GGWCC 5 cut(s) 464, 680, 1774, 2206, 3049
SmiMI CAYNNNNRTG 2 cut(s) 2559, 2963
SmlI CTYRAG 2 cut(s) 764, 2990
SmoI CTYRAG 2 cut(s) 764, 2990
SpeI ACTAGT 1 cut(s) 3086
SphI GCATGC 2 cut(s) 1902, 3009
SseBI AGGCCT 1 cut(s) 792
SsiI CCGC 5 cut(s) 472, 2109, 2142, 2595, 2597
SspI AATATT 2 cut(s) 2440, 2763
SspMI CTAG 6 cut(s) 983, 1310, 1523, 2000, 2348, 3087
SstI GAGCTC 1 cut(s) 161
StuI AGGCCT 1 cut(s) 792
StyD4I CCNGG 2 cut(s) 479, 781
StyI CCWWGG 4 cut(s) 570, 823, 1126, 1309
TaaI ACNGT 5 cut(s) 70, 1369, 1610, 2050, 2626
TaiI ACGT 2 cut(s) 27, 79
TaqI TCGA 6 cut(s) 440, 1151, 1825, 2629, 2754, 3103
TfiI GAWTC 8 cut(s) 343, 1153, 1642, 1656, 2112, 2284, 2779, 3017
TscAI CASTG 4 cut(s) 73, 2055, 2268, 2510
TseI GCWGC 4 cut(s) 1029, 1888, 2307, 2654
TspGWI ACGGA 3 cut(s) 1309, 1726, 3089
TspRI CASTG 4 cut(s) 73, 2055, 2268, 2510
Vha464I CTTAAG 2 cut(s) 764, 2990
VpaK11BI GGWCC 5 cut(s) 464, 680, 1774, 2206, 3049
VspI ATTAAT 1 cut(s) 204
XagI CCTNNNNNAGG 3 cut(s) 301, 786, 2072
XapI RAATTY 9 cut(s) 116, 414, 486, 836, 1396, 1622, 2336, 2357, 2941
XbaI TCTAGA 1 cut(s) 1522
XceI RCATGY 3 cut(s) 802, 1902, 3009
XcmI CCANNNNNNNNNTGG 1 cut(s) 2242
XmaJI CCTAGG 1 cut(s) 1309
XmiI GTMKAC 3 cut(s) 1557, 2157, 3103
XspI CTAG 6 cut(s) 983, 1310, 1523, 2000, 2348, 3087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.