Rmu_co8406981.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8406981.1
Physical Location & Seq
Forward (+)
1 .. 1182
1182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8406981.1_g000001.1.cds

Sequence Viewer

Length: 1182 bp
caaaactcactaactggcagcctccctgtggaagtgggtcagctgaagaatatttttgcccttcgcatcagtagaaataatttgactggaaaaattccagaaatcattggtggctgtatgagccttgaacttcttgacctccaagagaatctctttcaaggtatgataccgtcatctttagcttctttgagaggtcttcgggagttagatctttcacgaaacaatttgtcagggagaattccaaaaaacttacagacacttccatacctgctatatttgaacctgtctttcaataatctggaaggtgaggtaccaaaagaaggagtgtttcgaaacacaagcgccacatccttggttggaaatagcaaactttgtggcagtgatgttcctgaatttcagctaccagcatgccccatcagaaagaagagaaaattcagactaatgttcacaatttcgttagtggctggatgctctcttgtgtttgcagtcttggttactctttattggaggagaaaattgagaaagaaaccattagctgtagactcatcaatcaacttcttcccggaggtttcatataagacacttcatcaagctactggtggattctctccgagcactctaattggatcagggggttttggctctgtatacaaagggattcttgatcacggagaaaataacgtacttgccataaaggtcatcaaccttcaacagagaggggcttccaagagtttcacggcagaatgcaatgcactaagaaatatccggcaccgaaatcttgtcaagatcttaacttgctgctccagcatggattacaatggtactgaattcaaagctctaatttttgaatatatgtcaaatggaagtttagaggagtggctgcacagagaaaaccaatcaatgagtttgacccttcttcaaagattgaatattgttgttgatgtggcttctgcattatgctatcttcatgaccattgtgaacctccaatcattcactgcgacatgaagccaagtaatgttcttcttgacgatgacatggttgctcatgtaggtgattttggcttagccagactcatcccaaccaccacagagtcctcgcaaactcagagtagcactattggaataaagggaacaatcggctatgctgctccaggtaacattttccactatgtgtgtgcatga

Protein Analysis

393

Amino Acids

43.33

Weight (kDa)

8.81

Isoelectric Point (pI)

45.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 276
Acc65I GGTACC 1 cut(s) 310
AccB1I GGYRCC 2 cut(s) 310, 768
AccI GTMKAC 2 cut(s) 540, 648
AclWI GGATC 1 cut(s) 634
AcsI RAATTY 5 cut(s) 93, 237, 392, 431, 827
AcuI CTGAAG 1 cut(s) 65
AdeI CACNNNGTG 1 cut(s) 1171
AfaI GTAC 3 cut(s) 312, 684, 823
AfiI CCNNNNNNNGG 2 cut(s) 28, 320
AgsI TTSAA 9 cut(s) 128, 158, 280, 292, 710, 832, 848, 920, 928
AjnI CCWGG 1 cut(s) 1150
AluBI AGCT 6 cut(s) 43, 182, 400, 536, 593, 836
AluI AGCT 6 cut(s) 43, 182, 400, 536, 593, 836
Alw21I GWGCWC 1 cut(s) 617
AlwI GGATC 1 cut(s) 634
ApeKI GCWGC 4 cut(s) 18, 798, 880, 1145
ApoI RAATTY 5 cut(s) 93, 237, 392, 431, 827
Asp718I GGTACC 1 cut(s) 310
AspLEI GCGC 1 cut(s) 344
AsuC2I CCSGG 1 cut(s) 563
AsuHPI GGTGA 2 cut(s) 317, 1064
AsuII TTCGAA 1 cut(s) 331
BanI GGYRCC 2 cut(s) 310, 768
BarI GAAGNNNNNNTAC 2 cut(s) 294, 326
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 617
BbvI GCAGC 4 cut(s) 30, 785, 867, 1132
BccI CCATC 1 cut(s) 422
BceAI ACGGC 1 cut(s) 753
BciT130I CCWGG 1 cut(s) 1152
BclI TGATCA 1 cut(s) 664
BcnI CCSGG 1 cut(s) 563
BfmI CTRYAG 1 cut(s) 537
BfoI RGCGCY 1 cut(s) 345
BfuAI ACCTGC 1 cut(s) 276
BglII AGATCT 2 cut(s) 208, 786
BisI GCNGC 4 cut(s) 19, 799, 881, 1146
BlpI GCTNAGC 1 cut(s) 1063
BlsI GCNGC 4 cut(s) 20, 800, 882, 1147
Bme1390I CCNGG 2 cut(s) 563, 1152
BmiI GGNNCC 2 cut(s) 312, 770
BmrFI CCNGG 2 cut(s) 563, 1152
BmsI GCATC 2 cut(s) 75, 458
BpiI GAAGAC 1 cut(s) 188
BpmI CTGGAG 2 cut(s) 787, 1134
Bpu1102I GCTNAGC 1 cut(s) 1063
Bpu14I TTCGAA 1 cut(s) 331
BpuMI CCSGG 1 cut(s) 563
BsaJI CCNNGG 1 cut(s) 351
Bsc4I CCNNNNNNNGG 2 cut(s) 28, 320
Bse1I ACTGG 3 cut(s) 19, 91, 601
Bse3DI GCAATG 1 cut(s) 754
BseBI CCWGG 1 cut(s) 1152
BseDI CCNNGG 1 cut(s) 351
BseGI GGATG 3 cut(s) 347, 473, 1074
BseLI CCNNNNNNNGG 2 cut(s) 28, 320
BseMI GCAATG 1 cut(s) 754
BseMII CTCAG 1 cut(s) 1118
BseNI ACTGG 3 cut(s) 19, 91, 601
BseRI GAGGAG 2 cut(s) 523, 887
BseXI GCAGC 4 cut(s) 30, 785, 867, 1132
BsgI GTGCAG 1 cut(s) 866
BshNI GGYRCC 2 cut(s) 310, 768
BsiHKAI GWGCWC 1 cut(s) 617
BsiSI CCGG 2 cut(s) 563, 766
BslI CCNNNNNNNGG 2 cut(s) 28, 320
BsmI GAATGC 1 cut(s) 749
Bsp119I TTCGAA 1 cut(s) 331
Bsp1286I GDGCHC 1 cut(s) 617
Bsp143I GATC 4 cut(s) 208, 626, 664, 786
Bsp1720I GCTNAGC 1 cut(s) 1063
BspCNI CTCAG 1 cut(s) 1117
BspHI TCATGA 1 cut(s) 967
BspLI GGNNCC 2 cut(s) 312, 770
BspMI ACCTGC 1 cut(s) 276
BspPI GGATC 1 cut(s) 634
BspT104I TTCGAA 1 cut(s) 331
BspT107I GGYRCC 2 cut(s) 310, 768
BsrDI GCAATG 1 cut(s) 754
BsrI ACTGG 3 cut(s) 19, 91, 601
BssECI CCNNGG 1 cut(s) 351
BssMI GATC 4 cut(s) 208, 626, 664, 786
BssNAI GTATAC 1 cut(s) 649
BssT1I CCWWGG 1 cut(s) 351
Bst1107I GTATAC 1 cut(s) 649
Bst2UI CCWGG 1 cut(s) 1152
Bst4CI ACNGT 1 cut(s) 171
Bst6I CTCTTC 1 cut(s) 419
BstBI TTCGAA 1 cut(s) 331
BstC8I GCNNGC 1 cut(s) 409
BstDEI CTNAG 3 cut(s) 755, 1063, 1104
BstF5I GGATG 3 cut(s) 347, 473, 1074
BstH2I RGCGCY 1 cut(s) 345
BstHHI GCGC 1 cut(s) 344
BstKTI GATC 4 cut(s) 211, 629, 667, 789
BstMBI GATC 4 cut(s) 208, 626, 664, 786
BstMWI GCNNNNNNNGC 2 cut(s) 120, 804
BstNI CCWGG 1 cut(s) 1152
BstNSI RCATGY 1 cut(s) 411
BstSCI CCNGG 2 cut(s) 561, 1150
BstSFI CTRYAG 1 cut(s) 537
BstV1I GCAGC 4 cut(s) 30, 785, 867, 1132
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 2 cut(s) 208, 786
BstXI CCANNNNNNTGG 1 cut(s) 352
BstYI RGATCY 2 cut(s) 208, 786
BstZ17I GTATAC 1 cut(s) 649
BtsCI GGATG 3 cut(s) 347, 473, 1074
BtsI GCAGTG 2 cut(s) 385, 994
BtsIMutI CAGTG 2 cut(s) 385, 994
BveI ACCTGC 1 cut(s) 276
Cac8I GCNNGC 1 cut(s) 409
CciI TCATGA 1 cut(s) 967
CfoI GCGC 1 cut(s) 344
Csp6I GTAC 3 cut(s) 311, 683, 822
CspCI CAANNNNNGTGG 2 cut(s) 355, 390
CviAII CATG 7 cut(s) 408, 808, 968, 1003, 1036, 1046, 1179
CviQI GTAC 3 cut(s) 311, 683, 822
DdeI CTNAG 3 cut(s) 755, 1063, 1104
DpnI GATC 4 cut(s) 210, 628, 666, 788
DpnII GATC 4 cut(s) 208, 626, 664, 786
DraIII CACNNNGTG 1 cut(s) 1171
Eam1104I CTCTTC 1 cut(s) 419
EarI CTCTTC 1 cut(s) 419
Eco130I CCWWGG 1 cut(s) 351
Eco57I CTGAAG 1 cut(s) 65
EcoRI GAATTC 2 cut(s) 237, 827
EcoRII CCWGG 1 cut(s) 1150
EcoT14I CCWWGG 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 351
FaeI CATG 7 cut(s) 411, 811, 971, 1006, 1039, 1049, 1182
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FatI CATG 7 cut(s) 407, 807, 967, 1002, 1035, 1045, 1178
FbaI TGATCA 1 cut(s) 664
FblI GTMKAC 2 cut(s) 540, 648
Fnu4HI GCNGC 4 cut(s) 19, 799, 881, 1146
FokI GGATG 3 cut(s) 334, 480, 1061
Fsp4HI GCNGC 4 cut(s) 19, 799, 881, 1146
GlaI GCGC 1 cut(s) 343
GluI GCNGC 4 cut(s) 19, 799, 881, 1146
GsuI CTGGAG 2 cut(s) 787, 1134
HaeII RGCGCY 1 cut(s) 345
HapII CCGG 2 cut(s) 563, 766
HhaI GCGC 1 cut(s) 344
Hin1II CATG 7 cut(s) 411, 811, 971, 1006, 1039, 1049, 1182
Hin6I GCGC 1 cut(s) 342
HinP1I GCGC 1 cut(s) 342
HinfI GANTC 6 cut(s) 148, 542, 603, 658, 1071, 1091
HpaII CCGG 2 cut(s) 563, 766
HphI GGTGA 2 cut(s) 317, 1064
Hpy166II GTNNAC 4 cut(s) 447, 541, 649, 980
Hpy188I TCNGA 4 cut(s) 419, 437, 612, 1107
Hpy8I GTNNAC 4 cut(s) 447, 541, 649, 980
HpyAV CCTTC 5 cut(s) 71, 296, 314, 716, 923
HpyCH4III ACNGT 1 cut(s) 171
HpyCH4IV ACGT 1 cut(s) 681
HpyCH4V TGCA 6 cut(s) 485, 747, 752, 883, 953, 1178
HpyF10VI GCNNNNNNNGC 2 cut(s) 120, 804
HpyF3I CTNAG 3 cut(s) 755, 1063, 1104
HpySE526I ACGT 1 cut(s) 681
Hsp92II CATG 7 cut(s) 411, 811, 971, 1006, 1039, 1049, 1182
HspAI GCGC 1 cut(s) 342
KpnI GGTACC 1 cut(s) 314
Ksp22I TGATCA 1 cut(s) 664
Kzo9I GATC 4 cut(s) 208, 626, 664, 786
LmnI GCTCC 2 cut(s) 806, 1153
Lsp1109I GCAGC 4 cut(s) 30, 785, 867, 1132
LweI GCATC 2 cut(s) 75, 458
MaeII ACGT 1 cut(s) 681
MaeIII GTNAC 2 cut(s) 493, 1154
MalI GATC 4 cut(s) 210, 628, 666, 788
MboI GATC 4 cut(s) 208, 626, 664, 786
MboII GAAGA 7 cut(s) 58, 188, 436, 550, 908, 956, 1013
MflI RGATCY 2 cut(s) 208, 786
MhlI GDGCHC 1 cut(s) 617
MlyI GAGTC 3 cut(s) 536, 1065, 1100
MmeI TCCRAC 1 cut(s) 337
MseI TTAA 1 cut(s) 791
MslI CAYNNNNRTG 1 cut(s) 1050
MspA1I CMGCKG 1 cut(s) 43
MspI CCGG 2 cut(s) 563, 766
MspR9I CCNGG 2 cut(s) 563, 1152
Mva1269I GAATGC 1 cut(s) 749
MvaI CCWGG 1 cut(s) 1152
MwoI GCNNNNNNNGC 2 cut(s) 120, 804
NciI CCSGG 1 cut(s) 563
NdeII GATC 4 cut(s) 208, 626, 664, 786
NlaIII CATG 7 cut(s) 411, 811, 971, 1006, 1039, 1049, 1182
NlaIV GGNNCC 2 cut(s) 312, 770
NspI RCATGY 1 cut(s) 411
NspV TTCGAA 1 cut(s) 331
PaeI GCATGC 1 cut(s) 411
PagI TCATGA 1 cut(s) 967
PctI GAATGC 1 cut(s) 749
PfeI GAWTC 3 cut(s) 148, 603, 658
PfoI TCCNGGA 1 cut(s) 561
PkrI GCNGC 4 cut(s) 20, 800, 882, 1147
PleI GAGTC 3 cut(s) 536, 1065, 1099
PpsI GAGTC 3 cut(s) 536, 1065, 1099
Psp6I CCWGG 1 cut(s) 1150
PspGI CCWGG 1 cut(s) 1150
PspN4I GGNNCC 2 cut(s) 312, 770
PsuI RGATCY 2 cut(s) 208, 786
PvuII CAGCTG 1 cut(s) 43
RsaI GTAC 3 cut(s) 312, 684, 823
RsaNI GTAC 3 cut(s) 311, 683, 822
RseI CAYNNNNRTG 1 cut(s) 1050
SaqAI TTAA 1 cut(s) 791
SatI GCNGC 4 cut(s) 19, 799, 881, 1146
Sau3AI GATC 4 cut(s) 208, 626, 664, 786
SchI GAGTC 3 cut(s) 536, 1065, 1100
ScrFI CCNGG 2 cut(s) 563, 1152
SduI GDGCHC 1 cut(s) 617
SfaNI GCATC 2 cut(s) 75, 458
SfcI CTRYAG 1 cut(s) 537
SfuI TTCGAA 1 cut(s) 331
SmiMI CAYNNNNRTG 1 cut(s) 1050
SphI GCATGC 1 cut(s) 411
SspI AATATT 2 cut(s) 52, 931
StyD4I CCNGG 2 cut(s) 561, 1150
StyI CCWWGG 1 cut(s) 351
TaaI ACNGT 1 cut(s) 171
TaiI ACGT 1 cut(s) 684
TaqI TCGA 1 cut(s) 331
TfiI GAWTC 3 cut(s) 148, 603, 658
Tru1I TTAA 1 cut(s) 791
Tru9I TTAA 1 cut(s) 791
TscAI CASTG 2 cut(s) 385, 1001
TseI GCWGC 4 cut(s) 18, 798, 880, 1145
TspDTI ATGAA 4 cut(s) 561, 575, 956, 1019
TspGWI ACGGA 1 cut(s) 684
TspRI CASTG 2 cut(s) 385, 1001
XapI RAATTY 5 cut(s) 93, 237, 392, 431, 827
XceI RCATGY 1 cut(s) 411
XmiI GTMKAC 2 cut(s) 540, 648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.