Rmu_sc0005500.1_g000022
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005500.1
Physical Location & Seq
Forward (+)
119865 .. 123490
3626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005500.1_g000022.1.cds

Sequence Viewer

Length: 3063 bp
atggagagtttcacataccttcatgtcctgacccttctcctgttcatcaacttttcacaacctaccaccgttgtaagttcatttggcaatgaaaccgatcgcttggctttgctaaaattcaaagactgcatagcttttgatccacatgggttgttgaactcatggaatgactccgttcaatactgcaaatggcttggaattacttgtggcaaacaacatcaaagagtaacagccttgtacctaccacacgctgttttgcacggaaccatatcaccatacattggcaacctctcctttctcagggacttcagcctttacaacaacagcttctctggtaagattccgcaacaaatgttcaacttattccgactgcgacgtctcagtctcagtaccaacatgttggaggggagaattccaatcaacctgaccttgtgcgcagaactgagctacttaaatattggagaaaaccgctttaccggcaaaattccttcagagatcgggtcattgaggaagcttgtgcatctcactctagaagaaaacaatctaacaggagccatcccaccttccttggggaatctttcatcactcactggacttttttttggatggaacaatttggtgggcaccattccagaggtgctaggccgattgagaagcttatcactttttgcagttggtctcaataatctctctggtttgatccctccctccctttttaacatatcatctatgaacggcatctcacttacgggtaatatgtttaagggcagtattccgcctggtataggcctaaacatgcctaatctccagatattgttcctctccgaaaatgacttctttggagaaatccctgcttcactttccaatgcttctcagcttcattcgcttgattttgggcacaataattttgttggtcaacttcccgcaagttttggaaattttcctaatctccagcagctcaactttgaggtcaataatctaggaagtaattcatcaaatgatttgggatttatatcattgttgacaaattgcagcaatctggagatgttttctctgagttataacaattttggaggtgttttacccaactctgtagccaatttctcaactcaactgactgaactctaccttggaggtaatcaaatagtgggaacgattcctaaagcattagaaaatctcaacagtttaatacacttgagcctggaacataacttgttcacaggtatcattccagcttcttttgggaagttgcaaaaattgcaaagattatttttaaattccaatagattatcaggacggatcccatcttctcttggaaacctcacccaattgtttctactctacttattagaaaatgaattagaaggaagcattcctccaaatattggtaactgccaaaatctggaggtgatggatatatcacacaataagcttagtggagaaataccatcacaggtcataggcctgtcctccttctctatcaagctcaatttatcacaaaactcgctaacaggtactctgcctgtggaagtgggtaagctgaagaatatcaatacactcgatatctctgataataatttgaccggaggaattccagaaattattggaggctgtctgagccttgaatttctttacctccaagggaaccactttcaaggaatcataccttcttccttggctgctttgagaggtcttcagtatctagatctttcacgaaacaacttgtcaggacatattccaaaagacctacagagacttccattcttgatccatttgaacctttcgttcaataatctagagggtgaggtaccgaaagaaagagtttttcgaaacacaagtgcaatatcattggatggaaataccaaactttgtggaggtgtttcagaattgcagctaccagcatgccccagcaaagtaccaaagcagagaaggttgcatggttccaaactaaagttcacaatttccttggtcgctggatgttctcttctgtttgcagtcgtcttagctccttatttgaggagaaaaactcaaaagaataaaccgctatctgcagtgtcatcaatcgaataccttccaaaggtttcataccagacacttcatcaagctactgacggattctctccgagcaatcaaattggcttaggtggttttggctctgtatacaaaggtattcttgatcaagaagaaaacaaaattgttgccataaaggtccttaaccttcaacaaaaaggagcttccaagagttttgtggttgaatgcaatgcactaagaaatatccagcacaggaaccttgtgaagatcttgacatgttgctctagcattgactacaatggtaatgacttcaaagctctagtctttgagtatatgtcaaatggaagtttagaggagtggctgcaaagagaaaatcaatcaagaagtttgaaccttcttcaaagactgaatattgctgttgatttggcttctgcattgtattatcttcatgaccattgtgaaccacatatcattcattgtgatgtgaagccgagcaatgttcttcttgataatgacatggttgctcgttttggtgattttgggttggcaagactcatctcaacaaccacagactcctatcaaaatcaaagtagcacggttggaataaagggaaccattggctatgctgctccaggaagaagacctatcgacaaaatgtttaaagagggtttgaacctccataactttgtcaagatagccataccaggaagagtgatgcagattatagatcctactcttcttgccactttagaagagacaacacctgcaacatcacaaaatgtagtgaactacatcaatggttacaataatgaaatcgaagcagttgaagaagacattgacaatgagaatttaaggaagatgagcacttatgtgtggaagtgcatacttccaacccttaagattggacttgcatgctcggaagaatcaccaaggaatagaatgtctatggaagaggtccacaggaagctacaccatataaaagatgcttactctgatgttgacatctatcaagaaatgccaagaagaagctga

Protein Analysis

1020

Amino Acids

112.8

Weight (kDa)

7.32

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1062
AarI CACCTGC 1 cut(s) 2803
AasI GACNNNNNNGTC 2 cut(s) 375, 381
AatII GACGTC 1 cut(s) 379
Acc16I TGCGCA 1 cut(s) 436
Acc36I ACCTGC 1 cut(s) 2803
Acc65I GGTACC 1 cut(s) 1807
AccB1I GGYRCC 2 cut(s) 623, 1807
AccB7I CCANNNNNTGG 3 cut(s) 281, 1385, 1402
AccI GTMKAC 1 cut(s) 2160
AciI CCGC 5 cut(s) 344, 469, 776, 924, 2042
AclWI GGATC 6 cut(s) 134, 694, 1294, 1307, 1762, 2753
AcsI RAATTY 8 cut(s) 116, 411, 483, 937, 1276, 1590, 1625, 2878
AcuI CTGAAG 4 cut(s) 292, 474, 1562, 1679
AcyI GRCGYC 1 cut(s) 376
AfaI GTAC 5 cut(s) 239, 391, 1516, 1809, 1917
AfiI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
AflII CTTAAG 1 cut(s) 2927
AflIII ACRYGT 2 cut(s) 396, 2306
AjnI CCWGG 4 cut(s) 778, 1200, 2662, 2734
AjuI GAANNNNNNNTTGG 4 cut(s) 1113, 1145, 1937, 1969
AleI CACNNNNGTG 1 cut(s) 2900
Alw21I GWGCWC 1 cut(s) 2897
Alw26I GTCTC 5 cut(s) 383, 389, 683, 1747, 2780
AlwI GGATC 6 cut(s) 134, 694, 1294, 1307, 1762, 2753
AoxI GGCC 3 cut(s) 643, 787, 1462
ApeKI GCWGC 6 cut(s) 955, 1032, 1679, 1891, 2392, 2657
ApoI RAATTY 8 cut(s) 116, 411, 483, 937, 1276, 1590, 1625, 2878
ArsI GACNNNNNNTTYG 2 cut(s) 2337, 2369
Asp700I GAANNNNTTC 2 cut(s) 988, 2070
Asp718I GGTACC 1 cut(s) 1807
AspLEI GCGC 1 cut(s) 437
AspS9I GGNCC 2 cut(s) 2209, 2986
AsuHPI GGTGA 6 cut(s) 264, 1315, 1420, 1814, 2576, 2949
AsuII TTCGAA 1 cut(s) 1828
AvaII GGWCC 2 cut(s) 2209, 2986
BaeGI GKGCMC 2 cut(s) 626, 900
BamHI GGATCC 1 cut(s) 1299
BanI GGYRCC 2 cut(s) 623, 1807
BbsI GAAGAC 3 cut(s) 1685, 2677, 2868
Bbv12I GWGCWC 1 cut(s) 2897
BbvI GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
BccI CCATC 6 cut(s) 563, 600, 1312, 1405, 1456, 1847
BceAI ACGGC 1 cut(s) 751
BciT130I CCWGG 4 cut(s) 780, 1202, 2664, 2736
BclI TGATCA 1 cut(s) 2176
BcoDI GTCTC 5 cut(s) 383, 389, 683, 1747, 2780
BfaI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
BfmI CTRYAG 3 cut(s) 1092, 1748, 2049
BfrI CTTAAG 1 cut(s) 2927
BfuAI ACCTGC 1 cut(s) 2803
BglII AGATCT 2 cut(s) 1705, 2298
BisI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
BlsI GCNGC 6 cut(s) 957, 1034, 1681, 1893, 2394, 2659
Bme1390I CCNGG 4 cut(s) 780, 1202, 2664, 2736
Bme18I GGWCC 2 cut(s) 2209, 2986
BmgT120I GGNCC 2 cut(s) 2209, 2986
BmiI GGNNCC 9 cut(s) 265, 553, 625, 1301, 1646, 1809, 1942, 2288, 2644
BmrFI CCNGG 4 cut(s) 780, 1202, 2664, 2736
BmsI GCATC 4 cut(s) 529, 747, 2736, 3004
BpiI GAAGAC 3 cut(s) 1685, 2677, 2868
BplI GAGNNNNNCTC 2 cut(s) 2011, 2043
BpmI CTGGAG 5 cut(s) 791, 935, 1061, 1424, 2646
Bpu10I CCTNAGC 1 cut(s) 2140
Bpu14I TTCGAA 1 cut(s) 1828
BpuEI CTTGAG 1 cut(s) 1216
BsaBI GATNNNNATC 1 cut(s) 1012
BsaHI GRCGYC 1 cut(s) 376
BsaI GGTCTC 1 cut(s) 683
BsaJI CCNNGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
BsaWI WCCGGW 1 cut(s) 1583
Bsc4I CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 1 cut(s) 595
Bse3DI GCAATG 3 cut(s) 94, 2266, 2533
Bse8I GATNNNNATC 1 cut(s) 1012
BseBI CCWGG 4 cut(s) 780, 1202, 2664, 2736
BseDI CCNNGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
BseGI GGATG 4 cut(s) 555, 611, 1858, 1982
BseJI GATNNNNATC 1 cut(s) 1012
BseLI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
BseMI GCAATG 3 cut(s) 94, 2266, 2533
BseMII CTCAG 7 cut(s) 313, 394, 400, 434, 887, 1046, 1607
BseNI ACTGG 1 cut(s) 595
BseRI GAGGAG 2 cut(s) 2032, 2399
BseSI GKGCMC 2 cut(s) 626, 900
BseXI GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
BseYI CCCAGC 1 cut(s) 1907
Bsh1285I CGRYCG 1 cut(s) 100
BshFI GGCC 3 cut(s) 645, 789, 1464
BshNI GGYRCC 2 cut(s) 623, 1807
BsiEI CGRYCG 1 cut(s) 100
BsiHKAI GWGCWC 1 cut(s) 2897
BsiSI CCGG 2 cut(s) 477, 1584
BslFI GGGAC 1 cut(s) 317
BslI CCNNNNNNNGG 7 cut(s) 281, 300, 569, 785, 1385, 1402, 2077
BsmAI GTCTC 5 cut(s) 383, 389, 683, 1747, 2780
BsmBI CGTCTC 1 cut(s) 383
BsmFI GGGAC 1 cut(s) 317
BsmI GAATGC 2 cut(s) 1371, 2261
BsnI GGCC 3 cut(s) 645, 789, 1464
Bso31I GGTCTC 1 cut(s) 683
Bsp119I TTCGAA 1 cut(s) 1828
Bsp1286I GDGCHC 3 cut(s) 626, 900, 2897
BspACI CCGC 5 cut(s) 344, 469, 776, 924, 2042
BspANI GGCC 3 cut(s) 645, 789, 1464
BspCNI CTCAG 7 cut(s) 312, 393, 399, 435, 886, 1047, 1608
BspHI TCATGA 1 cut(s) 2479
BspLI GGNNCC 9 cut(s) 265, 553, 625, 1301, 1646, 1809, 1942, 2288, 2644
BspMAI CTGCAG 1 cut(s) 2053
BspMI ACCTGC 1 cut(s) 2803
BspPI GGATC 6 cut(s) 134, 694, 1294, 1307, 1762, 2753
BspT104I TTCGAA 1 cut(s) 1828
BspT107I GGYRCC 2 cut(s) 623, 1807
BspTI CTTAAG 1 cut(s) 2927
BspTNI GGTCTC 1 cut(s) 683
BsrDI GCAATG 3 cut(s) 94, 2266, 2533
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 1 cut(s) 595
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
BssNAI GTATAC 1 cut(s) 2161
BssNI GRCGYC 1 cut(s) 376
BssT1I CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
Bst1107I GTATAC 1 cut(s) 2161
Bst2UI CCWGG 4 cut(s) 780, 1202, 2664, 2736
Bst4CI ACNGT 3 cut(s) 70, 1184, 2629
Bst6I CTCTTC 5 cut(s) 1989, 2734, 2772, 2778, 2976
BstACI GRCGYC 1 cut(s) 376
BstAFI CTTAAG 1 cut(s) 2927
BstAPI GCANNNNNTGC 1 cut(s) 1258
BstBI TTCGAA 1 cut(s) 1828
BstC8I GCNNGC 2 cut(s) 1903, 2944
BstENI CCTNNNNNAGG 3 cut(s) 298, 783, 2075
BstF5I GGATG 4 cut(s) 555, 611, 1858, 1982
BstHHI GCGC 1 cut(s) 437
BstMAI GTCTC 5 cut(s) 383, 389, 683, 1747, 2780
BstMCI CGRYCG 1 cut(s) 100
BstMWI GCNNNNNNNGC 4 cut(s) 477, 883, 1258, 1617
BstNI CCWGG 4 cut(s) 780, 1202, 2664, 2736
BstNSI RCATGY 5 cut(s) 400, 799, 1905, 2310, 2946
BstSCI CCNGG 4 cut(s) 778, 1200, 2662, 2734
BstSFI CTRYAG 3 cut(s) 1092, 1748, 2049
BstSLI GKGCMC 2 cut(s) 626, 900
BstV1I GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
BstV2I GAAGAC 3 cut(s) 1685, 2677, 2868
BstX2I RGATCY 4 cut(s) 1299, 1705, 2298, 2758
BstXI CCANNNNNNTGG 1 cut(s) 400
BstYI RGATCY 4 cut(s) 1299, 1705, 2298, 2758
BstZ17I GTATAC 1 cut(s) 2161
BsuRI GGCC 3 cut(s) 645, 789, 1464
BtsCI GGATG 4 cut(s) 555, 611, 1858, 1982
BtsI GCAGTG 1 cut(s) 2058
BtsIMutI CAGTG 2 cut(s) 588, 2058
BveI ACCTGC 1 cut(s) 2803
Cac8I GCNNGC 2 cut(s) 1903, 2944
CciI TCATGA 1 cut(s) 2479
CfoI GCGC 1 cut(s) 437
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 2 cut(s) 2209, 2986
Csp6I GTAC 5 cut(s) 238, 390, 1515, 1808, 1916
CspCI CAANNNNNGTGG 6 cut(s) 132, 167, 549, 584, 1852, 1887
CviQI GTAC 5 cut(s) 238, 390, 1515, 1808, 1916
DraI TTTAAA 2 cut(s) 1275, 2692
DrdI GACNNNNNNGTC 2 cut(s) 375, 381
DseDI GACNNNNNNGTC 2 cut(s) 375, 381
Eam1104I CTCTTC 5 cut(s) 1989, 2734, 2772, 2778, 2976
EarI CTCTTC 5 cut(s) 1989, 2734, 2772, 2778, 2976
EciI GGCGGA 1 cut(s) 765
Eco130I CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
Eco147I AGGCCT 2 cut(s) 789, 1464
Eco31I GGTCTC 1 cut(s) 683
Eco32I GATATC 1 cut(s) 1564
Eco47I GGWCC 2 cut(s) 2209, 2986
Eco57I CTGAAG 4 cut(s) 292, 474, 1562, 1679
EcoNI CCTNNNNNAGG 3 cut(s) 298, 783, 2075
EcoO109I RGGNCCY 1 cut(s) 2209
EcoRI GAATTC 2 cut(s) 411, 1590
EcoRII CCWGG 4 cut(s) 778, 1200, 2662, 2734
EcoRV GATATC 1 cut(s) 1564
EcoT14I CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
ErhI CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
Esp3I CGTCTC 1 cut(s) 383
FalI AAGNNNNNCTT 2 cut(s) 2157, 2189
FaqI GGGAC 1 cut(s) 317
FauI CCCGC 1 cut(s) 931
FbaI TGATCA 1 cut(s) 2176
FblI GTMKAC 1 cut(s) 2160
Fnu4HI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
FokI GGATG 4 cut(s) 542, 618, 1865, 1989
Fsp4HI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
FspBI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
FspI TGCGCA 1 cut(s) 436
GlaI GCGC 1 cut(s) 436
GluI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
GsaI CCCAGC 1 cut(s) 1911
GsuI CTGGAG 5 cut(s) 791, 935, 1061, 1424, 2646
HaeIII GGCC 3 cut(s) 645, 789, 1464
HapII CCGG 2 cut(s) 477, 1584
HhaI GCGC 1 cut(s) 437
Hin1I GRCGYC 1 cut(s) 376
Hin6I GCGC 1 cut(s) 435
HinP1I GCGC 1 cut(s) 435
HincII GTYRAC 3 cut(s) 917, 1023, 3031
HindII GTYRAC 3 cut(s) 917, 1023, 3031
HindIII AAGCTT 3 cut(s) 512, 655, 1430
HinfI GANTC 9 cut(s) 170, 340, 574, 1156, 1659, 2115, 2583, 2603, 2954
HpaII CCGG 2 cut(s) 477, 1584
HphI GGTGA 6 cut(s) 264, 1315, 1420, 1814, 2576, 2949
Hpy166II GTNNAC 9 cut(s) 917, 1023, 1218, 1956, 2161, 2492, 2818, 2989, 3031
Hpy8I GTNNAC 9 cut(s) 917, 1023, 1218, 1956, 2161, 2492, 2818, 2989, 3031
Hpy99I CGWCG 1 cut(s) 378
HpyCH4III ACNGT 3 cut(s) 70, 1184, 2629
HpyCH4IV ACGT 1 cut(s) 376
HpyF10VI GCNNNNNNNGC 4 cut(s) 477, 883, 1258, 1617
HpySE526I ACGT 1 cut(s) 376
Hsp92I GRCGYC 1 cut(s) 376
HspAI GCGC 1 cut(s) 435
KpnI GGTACC 1 cut(s) 1811
Ksp22I TGATCA 1 cut(s) 2176
LmnI GCTCC 4 cut(s) 551, 2011, 2231, 2665
Lsp1109I GCAGC 6 cut(s) 967, 1044, 1666, 1903, 2379, 2644
LweI GCATC 4 cut(s) 529, 747, 2736, 3004
MaeI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
MaeII ACGT 1 cut(s) 376
MaeIII GTNAC 3 cut(s) 226, 1388, 2831
MfeI CAATTG 1 cut(s) 1328
MflI RGATCY 4 cut(s) 1299, 1705, 2298, 2758
MhlI GDGCHC 3 cut(s) 626, 900, 2897
MlyI GAGTC 3 cut(s) 164, 2577, 2597
MmeI TCCRAC 4 cut(s) 381, 391, 2611, 2945
MroXI GAANNNNTTC 2 cut(s) 988, 2070
MseI TTAA 9 cut(s) 452, 717, 762, 1187, 1274, 2214, 2691, 2882, 2928
MslI CAYNNNNRTG 2 cut(s) 2511, 2900
MspCI CTTAAG 1 cut(s) 2927
MspI CCGG 2 cut(s) 477, 1584
MspR9I CCNGG 4 cut(s) 780, 1202, 2664, 2736
MunI CAATTG 1 cut(s) 1328
Mva1269I GAATGC 2 cut(s) 1371, 2261
MvaI CCWGG 4 cut(s) 780, 1202, 2664, 2736
MwoI GCNNNNNNNGC 4 cut(s) 477, 883, 1258, 1617
NlaIV GGNNCC 9 cut(s) 265, 553, 625, 1301, 1646, 1809, 1942, 2288, 2644
NmeAIII GCCGAG 1 cut(s) 2547
NsbI TGCGCA 1 cut(s) 436
NspI RCATGY 5 cut(s) 400, 799, 1905, 2310, 2946
NspV TTCGAA 1 cut(s) 1828
OliI CACNNNNGTG 1 cut(s) 2900
PaeI GCATGC 2 cut(s) 1905, 2946
PagI TCATGA 1 cut(s) 2479
PaqCI CACCTGC 1 cut(s) 2803
PceI AGGCCT 2 cut(s) 789, 1464
PciI ACATGT 2 cut(s) 396, 2306
PctI GAATGC 2 cut(s) 1371, 2261
PdmI GAANNNNTTC 2 cut(s) 988, 2070
PfeI GAWTC 6 cut(s) 340, 574, 1156, 1659, 2115, 2954
PflMI CCANNNNNTGG 3 cut(s) 281, 1385, 1402
PfoI TCCNGGA 1 cut(s) 2662
PkrI GCNGC 6 cut(s) 957, 1034, 1681, 1893, 2394, 2659
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 3 cut(s) 164, 2577, 2597
PpsI GAGTC 3 cut(s) 164, 2577, 2597
PpuMI RGGWCCY 1 cut(s) 2209
PscI ACATGT 2 cut(s) 396, 2306
PsiI TTATAA 1 cut(s) 1062
Psp5II RGGWCCY 1 cut(s) 2209
Psp6I CCWGG 4 cut(s) 778, 1200, 2662, 2734
PspFI CCCAGC 1 cut(s) 1907
PspGI CCWGG 4 cut(s) 778, 1200, 2662, 2734
PspN4I GGNNCC 9 cut(s) 265, 553, 625, 1301, 1646, 1809, 1942, 2288, 2644
PspPI GGNCC 2 cut(s) 2209, 2986
PspPPI RGGWCCY 1 cut(s) 2209
PstI CTGCAG 1 cut(s) 2053
PsuI RGATCY 4 cut(s) 1299, 1705, 2298, 2758
PvuI CGATCG 1 cut(s) 100
RsaI GTAC 5 cut(s) 239, 391, 1516, 1809, 1917
RsaNI GTAC 5 cut(s) 238, 390, 1515, 1808, 1916
RseI CAYNNNNRTG 2 cut(s) 2511, 2900
SaqAI TTAA 9 cut(s) 452, 717, 762, 1187, 1274, 2214, 2691, 2882, 2928
SatI GCNGC 6 cut(s) 956, 1033, 1680, 1892, 2393, 2658
Sau96I GGNCC 2 cut(s) 2209, 2986
SchI GAGTC 3 cut(s) 164, 2577, 2597
ScrFI CCNGG 4 cut(s) 780, 1202, 2664, 2736
SduI GDGCHC 3 cut(s) 626, 900, 2897
SfaNI GCATC 4 cut(s) 529, 747, 2736, 3004
SfcI CTRYAG 3 cut(s) 1092, 1748, 2049
SfuI TTCGAA 1 cut(s) 1828
SinI GGWCC 2 cut(s) 2209, 2986
SmiMI CAYNNNNRTG 2 cut(s) 2511, 2900
SmlI CTYRAG 2 cut(s) 1195, 2927
SmoI CTYRAG 2 cut(s) 1195, 2927
SphI GCATGC 2 cut(s) 1905, 2946
SseBI AGGCCT 2 cut(s) 789, 1464
SsiI CCGC 5 cut(s) 344, 469, 776, 924, 2042
SspI AATATT 3 cut(s) 457, 1384, 2443
SspMI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
StuI AGGCCT 2 cut(s) 789, 1464
StyD4I CCNGG 4 cut(s) 778, 1200, 2662, 2734
StyI CCWWGG 6 cut(s) 567, 1129, 1639, 1674, 1965, 2960
TaaI ACNGT 3 cut(s) 70, 1184, 2629
TaiI ACGT 1 cut(s) 379
TaqI TCGA 5 cut(s) 1560, 1828, 2064, 2679, 2847
TfiI GAWTC 6 cut(s) 340, 574, 1156, 1659, 2115, 2954
Tru1I TTAA 9 cut(s) 452, 717, 762, 1187, 1274, 2214, 2691, 2882, 2928
Tru9I TTAA 9 cut(s) 452, 717, 762, 1187, 1274, 2214, 2691, 2882, 2928
TscAI CASTG 2 cut(s) 595, 2058
TseI GCWGC 6 cut(s) 955, 1032, 1679, 1891, 2392, 2657
TspGWI ACGGA 4 cut(s) 163, 276, 1312, 2127
TspRI CASTG 2 cut(s) 595, 2058
Van91I CCANNNNNTGG 3 cut(s) 281, 1385, 1402
Vha464I CTTAAG 1 cut(s) 2927
VpaK11BI GGWCC 2 cut(s) 2209, 2986
XagI CCTNNNNNAGG 3 cut(s) 298, 783, 2075
XapI RAATTY 8 cut(s) 116, 411, 483, 937, 1276, 1590, 1625, 2878
XbaI TCTAGA 3 cut(s) 529, 1702, 1795
XceI RCATGY 5 cut(s) 400, 799, 1905, 2310, 2946
XcmI CCANNNNNNNNNTGG 1 cut(s) 2245
XmiI GTMKAC 1 cut(s) 2160
XmnI GAANNNNTTC 2 cut(s) 988, 2070
XspI CTAG 7 cut(s) 530, 641, 980, 1703, 1796, 2316, 2351
ZraI GACGTC 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.