RchiOBHm_Chr5g0076391
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
82039797 .. 82043472
3676 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35105

Sequence Viewer

Length: 2943 bp
ATGTTGGAGGGGGAAATTCCAGTCAACCTGACCTTTTGCTTGAAATTAAGCATCATAAGCCTTGCATCAAGCCACCTTACCGGGAAAATTCCTTCAGAGATTGGCTCATTGATGAAACTTGTGTATCTTAATCTTCAGGTAAACAATCTGACAGGAGGCATTCCACCTTCCTTGGGGAATCTTTCATCAATCTCTAAATTTTCCTTAACGGATAACAATTTGGTGGGCAATCTCCCAGAGGAGATAGGAAGACTACAAAGTTTGTCTATATTTTACGTCTCTCTCAATCAACTCTCCGGTATGATCCCTCCCTCCATTTTTAACATATCATCTATGACCCGCTTCTCAATTACGGGTAATGAGTTTAGGGGTAGTATTCCACCTGCAATAGGCCAAAACATGCCTAATCTCCGAGAGATACGGATTAATAAAAATGAATTCTCTGGGCATATCCCAGTTTCTTTTGCTAATGCTTCTCAGCTGCAGGAAATTGATTTTGGGGAAAACAATTTTGTTGGGCAAGTTCCCGAAAGTTTTGGAAATCTTCCCCATCTTCAGTGGCTCAGCTTAGGAGGGAATAATCTAGGAAGTAATTCATCTAATGATTTGGGGTGTATAACATTCTTGACAAATTGCAGTAATCTGGAACTGCTTGCTCTGAGTTTTAACAATTTTGGAGGTGTTTTACCCAACTCCATAGGCAATTTCTCAACCAAACTTACTCAACTCTTGGTTGGGAGCAATCTAATAGCCGGAATGATTCCTGAAACATTAGGAAATCTCAACAATTTAATACTCTTGTCGCTGGATTATAACCTATTAACAGGTGTCATTCCAGCTTCTTTTGGGAAGTTACAAAAGCTGCAATTATTGTTATTACAAGTTAATAAATTATCAGGACAGATCCCATCTTCCCTAGGAAACCTCACCCAATTGTTTCACCTCATTTTAGCGGTTAATAATTTAGAGGGAAGCATTCCTTCGGATCTTGGCAATTGCAAAAGTTTGCAGTTATTGGAAATATCACAGAATAGACTTAGTGGAGATATACCACCACAGGTTATTGGTCTTTCCTCCTTATTTACCTCAGTCAACTTGTCACAAAACTCACTAACTGGTAGTCTACCTCTAGGTGTGGGTAAGCTAAAGAATATCAATAGACTAGATATTTCCATAAATAATATGACAGGAGAAATCCCAGAAACCATTGGAAATTGTTTGAGCCTTGAATTTCTTAACCTTCAAGGAAATCTCTTTCAAGGAGTCATACCTTCTTCTTTGGCTTCTCTGAGAGGTCTACAGTATCTAGATCTTTCACAAAACAATTTGTCAGGACATATTCCAAAAGACCTACAGAGACTTCTATTCTTGTTATATTTGAACCTTTCGTCCAATAATCTTGATGTAGAACAGATAGCGGTCCAATTTCAAGAACAATTGGATCGTGCTAAGGGTGGAAACCGAAAAGGGACTAGTAGACGTGAAATGGGCCTCCGGAGTCCGATCGGGACGCACTTTAGCTTTCCGGAAAGGGAATCGCGCCAGAAAGCAAACTCGTCGCTATGCCACGACTTTATCATTCCGACTGCGTCAAATCTAGAGGGTGAGGTACCGAAAGAAGGAATTTTTCGAAACACTAGTGCAATTTCATTAAATGGAAATACGAAACTATGTGGAGGTGTTTCAGAATTGCACCTACCAGCATGCCCCATCAAAGTAGCAAAGCAGAGAAAGTTGCACGGATTCAAACTAAAGTTCACAATTTCTTTAGTCACTGGATGCTCTCTTCTGTTTGTAGTCATCTTAACTCTTTATTGGAGAAGAAAATTTCAAAAGAAGAAACCATTATCTGTAGTGCCATCAATCAACTTCCTTTCAAAAGTTTCATTCCAGACACTTCATCAAGCTACTGGTGGATTCTCTCCGAGCAATCAAATTGGATCGGGTGGCTTTGGCTCTGTATACAAAGGGATTCTTGATCAACAAGAAAACAACGTTGTTGCCATAAAGGTCCTCAACCTTGAACAAAAAGGAGCTTCCAAGTGTTTTGTGGCAGAATGCAATGCACTAAGAAATATCCGGCATAGGAATCTTGTGAAGATCTTAACATGTTGCTCCAGCACAGATTACAATGGTAACGACTTCAAAGCTCTAGTTTTTGAGTATATGTCAAATGGGAGTTTAGAGGAGTGGTTGCATAGAGAAAACCAATCAAGGAGCTTGAACCTTCTTCAAAGACTGAATATTGCTGTTGATGTGGCATCTGCATTGTGTTATCTTCATGACCATTGTGAACCACAAATTATTCACTGTGACATAAAGCCAAGCAACGTTCTTCTTGATAATGACATGATTGCTCGTGTTGGTGATTTTGGGTTAGCAAGACTCATCCCACCGACCCCAGACTCCTCTGAAAATCAAAGCAGCACTGTTGGGATAAAGGGTACCATTGGCTATACTGCTCCAGAGTATGTTGTTGGTGTTGAGCCATCAAAACAAGGGGATGTATATAGTTATGGGATACTTGTGCTGCAATTGTTCACGGGAAGAAGACCCACTAATGAAATGTTTGTAGATGGTTGCAATATCCATACTTTTGTTAAGACAGCCATTCAAGGAAGACTTATGCAAATTGTAGATCCTACTCTTATTGCCACTTTAGCAGAGACTACGACTTCAACAACAAACAATGAAGTGACCAGTATTCGTTGTTACAACAATGAAATCGAAGCAATTGAAGACAACATTGACAATGAGAATTCAAGCACGATGAGCACTTACGTGTGGAAGTGCATACTTCCAACCCTTCAGATTGGACTTGCATGCTCAGAAGAATCGCCAAAGAATAGGATGTCTATGGAAGAGGTCCACAGGGAGCTACATCATATAAAAATTGCTTACACTAGTGTTGACATTCGTCGAGAGAGGCCAAGAAGAAGCTAA

Protein Analysis

980

Amino Acids

107.41

Weight (kDa)

7.52

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 33 - 191 5.5e-06 Leucine-rich repeat region
LRR_8 PF13855 135 - 195 2.5e-09 Leucine rich repeat
LRR_8 PF13855 239 - 298 2.3e-07 Leucine rich repeat
LRR_14 PF23598 257 - 343 2.9e-06 Leucine-rich repeat region
LRR_8 PF13855 409 - 467 4.1e-06 Leucine rich repeat
Pkinase PF00069 643 - 855 1.2e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 644 - 869 2.6e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 813
AarI CACCTGC 1 cut(s) 391
Acc36I ACCTGC 1 cut(s) 391
Acc65I GGTACC 2 cut(s) 1609, 2444
AccB1I GGYRCC 2 cut(s) 1609, 2444
AccI GTMKAC 4 cut(s) 1123, 1297, 1477, 1962
AccII CGCG 1 cut(s) 1540
AccIII TCCGGA 2 cut(s) 1494, 1525
AciI CCGC 3 cut(s) 340, 953, 1418
AclI AACGTT 2 cut(s) 1995, 2331
AclWI GGATC 6 cut(s) 298, 898, 993, 1449, 1948, 2633
AcsI RAATTY 8 cut(s) 15, 87, 197, 437, 1229, 1623, 1826, 2758
AcuI CTGAAG 4 cut(s) 78, 119, 539, 2792
AfaI GTAC 2 cut(s) 1611, 2446
AfiI CCNNNNNNNGG 3 cut(s) 173, 389, 1619
AflIII ACRYGT 2 cut(s) 2108, 2781
AhlI ACTAGT 3 cut(s) 1472, 1637, 2903
AjiI CACGTC 1 cut(s) 1481
AjuI GAANNNNNNNTTGG 2 cut(s) 480, 512
AleI CACNNNNGTG 1 cut(s) 2780
AloI GAACNNNNNNTCC 2 cut(s) 1373, 1405
Alw21I GWGCWC 1 cut(s) 2777
Alw26I GTCTC 3 cut(s) 283, 1351, 2660
AlwI GGATC 6 cut(s) 298, 898, 993, 1449, 1948, 2633
Aor13HI TCCGGA 2 cut(s) 1494, 1525
AoxI GGCC 3 cut(s) 391, 1489, 2927
ApeKI GCWGC 4 cut(s) 481, 862, 2424, 2530
ApoI RAATTY 8 cut(s) 15, 87, 197, 437, 1229, 1623, 1826, 2758
AseI ATTAAT 1 cut(s) 426
Asp700I GAANNNNTTC 1 cut(s) 592
Asp718I GGTACC 2 cut(s) 1609, 2444
AspA2I CCTAGG 1 cut(s) 916
AspLEI GCGC 1 cut(s) 1542
AspS9I GGNCC 4 cut(s) 1420, 1489, 2011, 2866
AsuC2I CCSGG 1 cut(s) 82
AsuHPI GGTGA 4 cut(s) 919, 932, 1616, 2378
AsuII TTCGAA 1 cut(s) 1630
AvaII GGWCC 3 cut(s) 1420, 2011, 2866
AvrII CCTAGG 1 cut(s) 916
BaeI ACNNNNGTAYC 2 cut(s) 107, 140
BanI GGYRCC 2 cut(s) 1609, 2444
BauI CACGAG 1 cut(s) 2358
BbsI GAAGAC 4 cut(s) 256, 2557, 2626, 2745
Bbv12I GWGCWC 1 cut(s) 2777
BbvI GCAGC 4 cut(s) 468, 849, 2436, 2517
BccI CCATC 6 cut(s) 558, 916, 1718, 1867, 2497, 2570
BcgI CGANNNNNNTGC 2 cut(s) 1539, 1573
BciVI GTATCC 1 cut(s) 2514
BclI TGATCA 1 cut(s) 1978
BcnI CCSGG 1 cut(s) 82
BcoDI GTCTC 3 cut(s) 283, 1351, 2660
BcuI ACTAGT 3 cut(s) 1472, 1637, 2903
BfmI CTRYAG 4 cut(s) 482, 1298, 1352, 1851
BfuAI ACCTGC 1 cut(s) 391
BfuI GTATCC 1 cut(s) 2514
BglII AGATCT 2 cut(s) 1309, 2100
BisI GCNGC 4 cut(s) 482, 863, 2425, 2531
BlnI CCTAGG 1 cut(s) 916
BlpI GCTNAGC 1 cut(s) 563
BlsI GCNGC 4 cut(s) 483, 864, 2426, 2532
Bme1390I CCNGG 1 cut(s) 82
Bme18I GGWCC 3 cut(s) 1420, 2011, 2866
BmgBI CACGTC 1 cut(s) 1481
BmgT120I GGNCC 4 cut(s) 1420, 1489, 2011, 2866
BmiI GGNNCC 2 cut(s) 1611, 2446
BmrFI CCNGG 1 cut(s) 82
BmrI ACTGGG 1 cut(s) 449
BmsI GCATC 4 cut(s) 60, 74, 1769, 2270
BmuI ACTGGG 1 cut(s) 449
BoxI GACNNNNGTC 1 cut(s) 2916
BpiI GAAGAC 4 cut(s) 256, 2557, 2626, 2745
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 2 cut(s) 2101, 2448
Bpu10I CCTNAGC 2 cut(s) 568, 1449
Bpu1102I GCTNAGC 1 cut(s) 563
Bpu14I TTCGAA 1 cut(s) 1630
BpuMI CCSGG 1 cut(s) 82
BsaAI YACGTR 1 cut(s) 2782
BsaJI CCNNGG 2 cut(s) 171, 916
BsaWI WCCGGW 3 cut(s) 296, 1494, 1525
Bsc4I CCNNNNNNNGG 3 cut(s) 173, 389, 1619
Bse1I ACTGG 6 cut(s) 20, 455, 1120, 1780, 1915, 2700
Bse3DI GCAATG 1 cut(s) 2068
BseAI TCCGGA 2 cut(s) 1494, 1525
BseDI CCNNGG 2 cut(s) 171, 916
BseGI GGATG 4 cut(s) 1784, 2388, 2509, 2856
BseLI CCNNNNNNNGG 3 cut(s) 173, 389, 1619
BseMI GCAATG 1 cut(s) 2068
BseMII CTCAG 6 cut(s) 491, 577, 650, 1101, 1280, 2841
BseNI ACTGG 6 cut(s) 20, 455, 1120, 1780, 1915, 2700
BseRI GAGGAG 3 cut(s) 254, 2201, 2398
BseXI GCAGC 4 cut(s) 468, 849, 2436, 2517
Bsh1236I CGCG 1 cut(s) 1540
Bsh1285I CGRYCG 1 cut(s) 1506
BshFI GGCC 3 cut(s) 393, 1491, 2929
BshNI GGYRCC 2 cut(s) 1609, 2444
BsiEI CGRYCG 1 cut(s) 1506
BsiHKAI GWGCWC 1 cut(s) 2777
BsiSI CCGG 6 cut(s) 81, 297, 753, 1495, 1526, 2080
BslFI GGGAC 2 cut(s) 1483, 1522
BslI CCNNNNNNNGG 3 cut(s) 173, 389, 1619
BsmAI GTCTC 3 cut(s) 283, 1351, 2660
BsmBI CGTCTC 1 cut(s) 283
BsmFI GGGAC 2 cut(s) 1483, 1522
BsmI GAATGC 3 cut(s) 159, 975, 2063
BsnI GGCC 3 cut(s) 393, 1491, 2929
Bsp119I TTCGAA 1 cut(s) 1630
Bsp1286I GDGCHC 1 cut(s) 2777
Bsp13I TCCGGA 2 cut(s) 1494, 1525
Bsp1720I GCTNAGC 1 cut(s) 563
BspACI CCGC 3 cut(s) 340, 953, 1418
BspANI GGCC 3 cut(s) 393, 1491, 2929
BspCNI CTCAG 6 cut(s) 490, 576, 651, 1100, 1281, 2840
BspEI TCCGGA 2 cut(s) 1494, 1525
BspFNI CGCG 1 cut(s) 1540
BspHI TCATGA 1 cut(s) 2281
BspLI GGNNCC 2 cut(s) 1611, 2446
BspMAI CTGCAG 1 cut(s) 486
BspMI ACCTGC 1 cut(s) 391
BspPI GGATC 6 cut(s) 298, 898, 993, 1449, 1948, 2633
BspT104I TTCGAA 1 cut(s) 1630
BspT107I GGYRCC 2 cut(s) 1609, 2444
BsrDI GCAATG 1 cut(s) 2068
BsrI ACTGG 6 cut(s) 20, 455, 1120, 1780, 1915, 2700
BssECI CCNNGG 2 cut(s) 171, 916
BssNAI GTATAC 1 cut(s) 1963
BssSI CACGAG 1 cut(s) 2358
BssT1I CCWWGG 2 cut(s) 171, 916
Bst1107I GTATAC 1 cut(s) 1963
Bst2BI CACGAG 1 cut(s) 2358
Bst4CI ACNGT 3 cut(s) 1302, 2312, 2431
Bst6I CTCTTC 2 cut(s) 1791, 2856
BstBAI YACGTR 1 cut(s) 2782
BstBI TTCGAA 1 cut(s) 1630
BstC8I GCNNGC 3 cut(s) 654, 1705, 2824
BstENI CCTNNNNNAGG 1 cut(s) 387
BstF5I GGATG 4 cut(s) 1784, 2388, 2509, 2856
BstFNI CGCG 1 cut(s) 1540
BstHHI GCGC 1 cut(s) 1542
BstMAI GTCTC 3 cut(s) 283, 1351, 2660
BstMCI CGRYCG 1 cut(s) 1506
BstMWI GCNNNNNNNGC 3 cut(s) 57, 2660, 2772
BstNSI RCATGY 4 cut(s) 403, 1707, 2112, 2826
BstPAI GACNNNNGTC 1 cut(s) 2916
BstSCI CCNGG 1 cut(s) 80
BstSFI CTRYAG 4 cut(s) 482, 1298, 1352, 1851
BstUI CGCG 1 cut(s) 1540
BstV1I GCAGC 4 cut(s) 468, 849, 2436, 2517
BstV2I GAAGAC 4 cut(s) 256, 2557, 2626, 2745
BstX2I RGATCY 5 cut(s) 903, 985, 1309, 2100, 2638
BstYI RGATCY 5 cut(s) 903, 985, 1309, 2100, 2638
BstZ17I GTATAC 1 cut(s) 1963
BsuI GTATCC 1 cut(s) 2514
BsuRI GGCC 3 cut(s) 393, 1491, 2929
BtrI CACGTC 1 cut(s) 1481
BtsCI GGATG 4 cut(s) 1784, 2388, 2509, 2856
BtsIMutI CAGTG 4 cut(s) 563, 1773, 2308, 2427
BveI ACCTGC 1 cut(s) 391
Cac8I GCNNGC 3 cut(s) 654, 1705, 2824
CciI TCATGA 1 cut(s) 2281
CfoI GCGC 1 cut(s) 1542
Cfr13I GGNCC 4 cut(s) 1420, 1489, 2011, 2866
CseI GACGC 2 cut(s) 1519, 1578
Csp6I GTAC 2 cut(s) 1610, 2445
CspCI CAANNNNNGTGG 2 cut(s) 153, 188
CviAII CATG 6 cut(s) 400, 1704, 2109, 2282, 2350, 2823
CviQI GTAC 2 cut(s) 1610, 2445
Eam1104I CTCTTC 2 cut(s) 1791, 2856
EarI CTCTTC 2 cut(s) 1791, 2856
Eco130I CCWWGG 2 cut(s) 171, 916
Eco47I GGWCC 3 cut(s) 1420, 2011, 2866
Eco57I CTGAAG 4 cut(s) 78, 119, 539, 2792
EcoNI CCTNNNNNAGG 1 cut(s) 387
EcoO109I RGGNCCY 1 cut(s) 2011
EcoRI GAATTC 2 cut(s) 437, 2758
EcoT14I CCWWGG 2 cut(s) 171, 916
ErhI CCWWGG 2 cut(s) 171, 916
Esp3I CGTCTC 1 cut(s) 283
FaeI CATG 6 cut(s) 403, 1707, 2112, 2285, 2353, 2826
FalI AAGNNNNNCTT 6 cut(s) 964, 996, 1959, 1991, 2607, 2639
FaqI GGGAC 2 cut(s) 1483, 1522
FatI CATG 6 cut(s) 399, 1703, 2108, 2281, 2349, 2822
FauI CCCGC 1 cut(s) 347
FbaI TGATCA 1 cut(s) 1978
FblI GTMKAC 4 cut(s) 1123, 1297, 1477, 1962
Fnu4HI GCNGC 4 cut(s) 482, 863, 2425, 2531
FokI GGATG 4 cut(s) 1791, 2375, 2516, 2863
Fsp4HI GCNGC 4 cut(s) 482, 863, 2425, 2531
GlaI GCGC 1 cut(s) 1541
GluI GCNGC 4 cut(s) 482, 863, 2425, 2531
GsuI CTGGAG 2 cut(s) 2101, 2448
HaeIII GGCC 3 cut(s) 393, 1491, 2929
HapII CCGG 6 cut(s) 81, 297, 753, 1495, 1526, 2080
HgaI GACGC 2 cut(s) 1519, 1578
HhaI GCGC 1 cut(s) 1542
Hin1II CATG 6 cut(s) 403, 1707, 2112, 2285, 2353, 2826
Hin6I GCGC 1 cut(s) 1540
HinP1I GCGC 1 cut(s) 1540
HincII GTYRAC 3 cut(s) 25, 1093, 2911
HindII GTYRAC 3 cut(s) 25, 1093, 2911
HpaII CCGG 6 cut(s) 81, 297, 753, 1495, 1526, 2080
HphI GGTGA 4 cut(s) 919, 932, 1616, 2378
Hpy99I CGWCG 2 cut(s) 1561, 2922
HpyAV CCTTC 8 cut(s) 102, 177, 990, 1250, 1281, 1613, 2237, 2816
HpyCH4III ACNGT 3 cut(s) 1302, 2312, 2431
HpyCH4IV ACGT 5 cut(s) 276, 1480, 1995, 2331, 2781
HpyF10VI GCNNNNNNNGC 3 cut(s) 57, 2660, 2772
HpySE526I ACGT 5 cut(s) 276, 1480, 1995, 2331, 2781
Hsp92II CATG 6 cut(s) 403, 1707, 2112, 2285, 2353, 2826
HspAI GCGC 1 cut(s) 1540
Kpn2I TCCGGA 2 cut(s) 1494, 1525
KpnI GGTACC 2 cut(s) 1613, 2448
Ksp22I TGATCA 1 cut(s) 1978
LmnI GCTCC 6 cut(s) 738, 2033, 2120, 2217, 2467, 2875
Lsp1109I GCAGC 4 cut(s) 468, 849, 2436, 2517
LweI GCATC 4 cut(s) 60, 74, 1769, 2270
MaeII ACGT 5 cut(s) 276, 1480, 1995, 2331, 2781
MaeIII GTNAC 7 cut(s) 852, 1098, 1771, 2135, 2312, 2695, 2711
MfeI CAATTG 5 cut(s) 932, 994, 1436, 2534, 2733
MflI RGATCY 5 cut(s) 903, 985, 1309, 2100, 2638
MhlI GDGCHC 1 cut(s) 2777
MlyI GAGTC 4 cut(s) 1272, 1507, 2379, 2399
MmeI TCCRAC 2 cut(s) 1607, 2825
MroI TCCGGA 2 cut(s) 1494, 1525
MroXI GAANNNNTTC 1 cut(s) 592
MslI CAYNNNNRTG 1 cut(s) 2780
MspA1I CMGCKG 1 cut(s) 481
MspI CCGG 6 cut(s) 81, 297, 753, 1495, 1526, 2080
MspR9I CCNGG 1 cut(s) 82
MunI CAATTG 5 cut(s) 932, 994, 1436, 2534, 2733
Mva1269I GAATGC 3 cut(s) 159, 975, 2063
MvnI CGCG 1 cut(s) 1540
MwoI GCNNNNNNNGC 3 cut(s) 57, 2660, 2772
NciI CCSGG 1 cut(s) 82
NlaIII CATG 6 cut(s) 403, 1707, 2112, 2285, 2353, 2826
NlaIV GGNNCC 2 cut(s) 1611, 2446
NmuCI GTSAC 4 cut(s) 1098, 1771, 2312, 2695
NspI RCATGY 4 cut(s) 403, 1707, 2112, 2826
NspV TTCGAA 1 cut(s) 1630
OliI CACNNNNGTG 1 cut(s) 2780
PaeI GCATGC 2 cut(s) 1707, 2826
PagI TCATGA 1 cut(s) 2281
PaqCI CACCTGC 1 cut(s) 391
PciI ACATGT 1 cut(s) 2108
PctI GAATGC 3 cut(s) 159, 975, 2063
PdmI GAANNNNTTC 1 cut(s) 592
PfeI GAWTC 8 cut(s) 178, 760, 1535, 1743, 1917, 1972, 2089, 2834
PflFI GACNNNGTC 1 cut(s) 1588
PkrI GCNGC 4 cut(s) 483, 864, 2426, 2532
Ple19I CGATCG 1 cut(s) 1506
PleI GAGTC 4 cut(s) 1271, 1506, 2379, 2399
PpsI GAGTC 4 cut(s) 1271, 1506, 2379, 2399
Ppu21I YACGTR 1 cut(s) 2782
PpuMI RGGWCCY 1 cut(s) 2011
PscI ACATGT 1 cut(s) 2108
PshAI GACNNNNGTC 1 cut(s) 2916
PshBI ATTAAT 1 cut(s) 426
PsiI TTATAA 1 cut(s) 813
Psp1406I AACGTT 2 cut(s) 1995, 2331
Psp5II RGGWCCY 1 cut(s) 2011
PspN4I GGNNCC 2 cut(s) 1611, 2446
PspPI GGNCC 4 cut(s) 1420, 1489, 2011, 2866
PspPPI RGGWCCY 1 cut(s) 2011
PstI CTGCAG 1 cut(s) 486
PsuI RGATCY 5 cut(s) 903, 985, 1309, 2100, 2638
PsyI GACNNNGTC 1 cut(s) 1588
PvuI CGATCG 1 cut(s) 1506
PvuII CAGCTG 1 cut(s) 481
RsaI GTAC 2 cut(s) 1611, 2446
RsaNI GTAC 2 cut(s) 1610, 2445
RseI CAYNNNNRTG 1 cut(s) 2780
SatI GCNGC 4 cut(s) 482, 863, 2425, 2531
Sau96I GGNCC 4 cut(s) 1420, 1489, 2011, 2866
SchI GAGTC 4 cut(s) 1272, 1507, 2379, 2399
ScrFI CCNGG 1 cut(s) 82
SduI GDGCHC 1 cut(s) 2777
SfaNI GCATC 4 cut(s) 60, 74, 1769, 2270
SfcI CTRYAG 4 cut(s) 482, 1298, 1352, 1851
SfuI TTCGAA 1 cut(s) 1630
SinI GGWCC 3 cut(s) 1420, 2011, 2866
SmiMI CAYNNNNRTG 1 cut(s) 2780
SpeI ACTAGT 3 cut(s) 1472, 1637, 2903
SphI GCATGC 2 cut(s) 1707, 2826
SsiI CCGC 3 cut(s) 340, 953, 1418
SspI AATATT 1 cut(s) 2245
StyD4I CCNGG 1 cut(s) 80
StyI CCWWGG 2 cut(s) 171, 916
TaaI ACNGT 3 cut(s) 1302, 2312, 2431
TaiI ACGT 5 cut(s) 279, 1483, 1998, 2334, 2784
TaqI TCGA 3 cut(s) 1630, 2727, 2920
TfiI GAWTC 8 cut(s) 178, 760, 1535, 1743, 1917, 1972, 2089, 2834
TscAI CASTG 4 cut(s) 563, 1780, 2315, 2434
TseFI GTSAC 4 cut(s) 1098, 1771, 2312, 2695
TseI GCWGC 4 cut(s) 481, 862, 2424, 2530
Tsp45I GTSAC 4 cut(s) 1098, 1771, 2312, 2695
TspGWI ACGGA 3 cut(s) 224, 436, 1755
TspRI CASTG 4 cut(s) 563, 1780, 2315, 2434
Tth111I GACNNNGTC 1 cut(s) 1588
VpaK11BI GGWCC 3 cut(s) 1420, 2011, 2866
VspI ATTAAT 1 cut(s) 426
XagI CCTNNNNNAGG 1 cut(s) 387
XapI RAATTY 8 cut(s) 15, 87, 197, 437, 1229, 1623, 1826, 2758
XbaI TCTAGA 2 cut(s) 1306, 1597
XceI RCATGY 4 cut(s) 403, 1707, 2112, 2826
XcmI CCANNNNNNNNNTGG 1 cut(s) 2047
XmaJI CCTAGG 1 cut(s) 916
XmiI GTMKAC 4 cut(s) 1123, 1297, 1477, 1962
XmnI GAANNNNTTC 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.