Rw1G032020
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
60210166 .. 60213670
3505 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G032020.1

Sequence Viewer

Length: 3126 bp
ATGGAGCTTCATGAACCCAGGTTATGTGCATTTTGGTTCATAATCCTTCATGTGATTACATATCTCCTTGTTATGAACTTCTTCCTGCCTACCACTATTGCAAGATCATTTGGCAATGAAACCGATCGACTTGCTTTACTCAAATTCAAAGAATCCATAATCACTGACCCACTAGGGTTCTTAGACACATGGAATGACTCCCTTCACTTTTGCAACTGGCATGGGATTTCCTGCGGCTCAAGGCATCAGAGAGTGGTAGCCTTGAACCTTTCTCATTCTGATTTGCATGGAACCATATCACCTTACACTGGCAACCTCTCTTTTCTAAGGTCCATCAACCTTGGAAACAACAACTTCTCTGGCAAGATTCCGCAGCAACTAGATCAATTGCGCAGATTGGGCCATCTGAATCTAAGTCACAACATGTTGGAGGGGCGAATTCCAGTCAACCTGACCTCCTGCCCGGAACTGAGTCGAATAGATTTATGGTCAAACTGTCTTACAGGCACAATTCCACCAGACCTTGGCTCATTGGTGAAGCTTGAGTTTCTAAGTCTGAGGGAAAACAAATTGACAGGAGGCATTCCACCTTCCTTGGGAAATCTTTCATCCATCGGTAAACTTACCCTAGCAGATAACAATTTGGTGGGCAACGTCCCAGAGGAGATAGGCCGATTGAGAAGCTTATATTTTTTTGGCGTTGGTTCCAATAAACTCTCTGGTATGATACCTCATTCCCTTTTTAACATATCATCTATGGAGTCCTTCGCAATTACAGATAATAAATTTAAGGGCAGTATTCCACCCGCCATAGGCCTCAACATGCCTCATCTCCAAAAATTGTACGTCGGCGGAAATGAACTCTTTGGGCAAATCCCATCTTCACTTTCCAATGCTTCTCAGTTTTATTCACTTGATGTTTCGGAAAATAATTTTGTAGGACAAGTTCCCAAATGTTTTGGAGATCTTCCAGATCTCCAGCATTTCGATGCAAGTGACAATAATCTAGGAAGTTTTTCTGCTGGTGACTTGGATTTTATCACATCCTTGGCAAATTGCAGCAAACTGGGAGTGCTTGATATGGGTTACAACAATTTTGGAGGTGTTTTACCGAACTATGGGGCCAACTTGTCAACTCAACTGACTAAATTATTCTTTGGAGGCAATCAAATATCAGGAGTGATCCCTGAAACATTAGAAAATCTCAACAGTGTAATAGCCTTGGGCCTGGAGAATAACCTGTTCAGAGGCGCCATTCCTACCTCTATTGCCAAGTTACAAAAGCTGCAAGTCCTGAGTTTATATGGTAATAGATTATCAGGACGGATTCCATCTTCCATAGGAAACCTCACTCAATTGTATTACATCGCCTTGTCAGAAAATGACTTGGAAGGAAACATTCCTCCAAGTATTGGAAACTGCCAACATTTGCAGTATTTGTATGTATTAGAGAATAGGCTTAGTGGAGATATACCACCACAGGTGTTTGGTCTTTCCTCTCTTGTCTATCTTAGCTTATCACAAAACTCACTAACCGGCAGCCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATTTTTTTCCTTGGCATCTCTAGAAATAATTTGACTGGAGAAATTCCGGAAACCATTGGTGGCTGTATGAGCCTTGAACTTCTTTACCTAGAAGGGAATTTCTTTCAAGGTAAGATACCTTCATCTTTGGCTTCTTTGAGAGGTCTTCAGGAGTTAGATCTTTCACGAAACAATTTGTCAGGCCAAATTCCAATAAACCTGCAGAGACTTCCATATCTGCTATATTTGAACTTGTCTTTCAATAATCTGGAAGGTGAGGTACCAAAAGAAGGAGCCTTTCGAAACACAAGCGCAACATCCTTGGTTGGAAATACCAAACTTTGTGTTGACGGTGTTTCTGAATTTCAACTACCAGCATGCACCATCAAAAAGAAGAGAAAATTCAAACTACAGTTCACAATTTTGTTTGTGGCTGGATGCTCTCTTCTGTTTGCAGCCTTGTTTACTCTTTATTGGAGGAGAAAAATGAGAAAGAAACCATTAGCTGTAGACTCATTAATCAACTTCCTCTCAAAGGTTTCATACGAGACACTTCATCAAGCTACTGGCGGATTCTCTCCGAGCACTCTAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGAATTCTTGATCAGGAAGAAAACAGCGTGGTTGCCATAAAGGTCATCAACCTTCAACAGAGAGGAGCTTCCAAGAGTTTCACTGCAGAATGCAATGCACTAAGAAATATCCGGCACCGGAATCTTGTCAAGATCTTTACTTGCTGCTCCAGCATGGATTACAATGGTAATGAATTCAAAGCTCTAGTTTTTGAATATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACCAAACAATGAGTTTGACCCTTCTTCAAAGATTGAATATTGTTGTTGATGTGGCTTCTGCATTATGTTATCTTCATGACCATTGTGAACCTCCAATAATTCACTGCGACATGAAGCCAAGCAATGTTCTTCTTGACGATGACATGGTTGCTCATGTAGGTGATTTTGGCTTAGCTAGACTCATCTTAACCACCAGAGAGTCCTTGCAAACTCAGAGTAGCACTATTGGAATAAAGGGAACAATCGGCTATGCTGCTCCAGAGTACGCAAGTGGTGTAGAGGCATCAAGACAGGGAGATGTATATAGTTATGGGATTCTTGTATTGGAAATGTTCACAGGAAGAAGACCAACTGACGAAATGTTCAAAGACGGTTTGAAACTCCACGACTTTGTTAAGATGGCATTACCAGGAAGGCTTGTGCAGGTTGTGGACGCTGCTCTTCTCGCCACGCTGGAAGAGACAGCAACTGCAGGAAATGAAGTGAACAACATACTTAGTGGTCATAACAATGAAATTGAAGCGGAAGAGAAAAATAGAAATTATGAGAACCTAAGCAAGATGGACGCACATGTGTGGAAGTGTATACATTCACTCCTTCACATTGGACTGGCATGCTCAGAGGACTCACCAAAGAAGAGGATGTCTATGGAGGATGTCGTCAGGGACCTACACGATATTCAAATTGCTTACATTGGTGGTGAGATCCATTGA

Protein Analysis

1041

Amino Acids

114.78

Weight (kDa)

6.16

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 78 1.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 399 - 483 3.4e-08 Leucine-rich repeat region
LRR_14 PF23598 447 - 508 6e-06 Leucine-rich repeat region
LRR_8 PF13855 476 - 535 6.6e-07 Leucine rich repeat
LRR_14 PF23598 498 - 608 3.9e-08 Leucine-rich repeat region
LRR_8 PF13855 548 - 607 2.2e-07 Leucine rich repeat
Pkinase PF00069 713 - 937 1.5e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 714 - 927 4.7e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 392
Acc36I ACCTGC 2 cut(s) 1779, 2827
Acc65I GGTACC 1 cut(s) 1831
AccB1I GGYRCC 3 cut(s) 1250, 1831, 2289
AccB7I CCANNNNNTGG 2 cut(s) 524, 1412
AccI GTMKAC 3 cut(s) 2061, 2169, 2998
AccIII TCCGGA 1 cut(s) 1618
AciI CCGC 7 cut(s) 234, 371, 807, 852, 2121, 2154, 2936
AclWI GGATC 3 cut(s) 1177, 2155, 3112
AcuI CTGAAG 2 cut(s) 1586, 1703
AcyI GRCGYC 1 cut(s) 1251
AfaI GTAC 3 cut(s) 845, 1833, 2678
AfiI CCNNNNNNNGG 9 cut(s) 308, 524, 596, 812, 1118, 1412, 1549, 1841, 2086
AflIII ACRYGT 2 cut(s) 423, 2983
AjnI CCWGG 3 cut(s) 17, 1227, 2821
AleI CACNNNNGTG 1 cut(s) 2986
Alw21I GWGCWC 1 cut(s) 2138
Alw26I GTCTC 3 cut(s) 1771, 2093, 2867
AlwI GGATC 3 cut(s) 1177, 2155, 3112
AlwNI CAGNNNCTG 1 cut(s) 2882
Aor13HI TCCGGA 1 cut(s) 1618
AoxI GGCC 6 cut(s) 400, 670, 814, 1122, 1225, 1753
ApeKI GCWGC 9 cut(s) 373, 1059, 1285, 1539, 2006, 2319, 2401, 2666, 2849
AseI ATTAAT 1 cut(s) 2069
Asp700I GAANNNNTTC 3 cut(s) 80, 604, 1015
Asp718I GGTACC 1 cut(s) 1831
AspLEI GCGC 3 cut(s) 393, 1253, 1865
AspS9I GGNCC 5 cut(s) 330, 400, 1122, 1225, 3079
AsuC2I CCSGG 1 cut(s) 464
AsuHPI GGTGA 7 cut(s) 291, 547, 1037, 1838, 2585, 3033, 3125
AsuII TTCGAA 1 cut(s) 1852
AvaII GGWCC 2 cut(s) 330, 3079
BanI GGYRCC 3 cut(s) 1250, 1831, 2289
BarI GAAGNNNNNNTAC 4 cut(s) 1675, 1707, 1815, 1847
BbsI GAAGAC 2 cut(s) 1709, 2764
Bbv12I GWGCWC 1 cut(s) 2138
BbvI GCAGC 9 cut(s) 385, 1071, 1272, 1551, 2018, 2306, 2388, 2653, 2836
BccI CCATC 8 cut(s) 341, 411, 620, 886, 1339, 1943, 2806, 2968
BcgI CGANNNNNNTGC 2 cut(s) 113, 147
BciT130I CCWGG 3 cut(s) 19, 1229, 2823
BclI TGATCA 1 cut(s) 2185
BcnI CCSGG 1 cut(s) 464
BcoDI GTCTC 3 cut(s) 1771, 2093, 2867
BfaI CTAG 8 cut(s) 173, 380, 629, 1007, 1593, 1661, 2360, 2589
BfmI CTRYAG 5 cut(s) 1772, 1961, 2058, 2259, 2883
BfoI RGCGCY 1 cut(s) 1254
BfuAI ACCTGC 2 cut(s) 1779, 2827
BglII AGATCT 4 cut(s) 964, 973, 1729, 2307
BlpI GCTNAGC 1 cut(s) 2584
Bme1390I CCNGG 4 cut(s) 19, 464, 1229, 2823
Bme18I GGWCC 2 cut(s) 330, 3079
BmgT120I GGNCC 5 cut(s) 330, 400, 1122, 1225, 3079
BmiI GGNNCC 8 cut(s) 292, 706, 1123, 1252, 1833, 1846, 2291, 3080
BmrFI CCNGG 4 cut(s) 19, 464, 1229, 2823
BmrI ACTGGG 1 cut(s) 1076
BmsI GCATC 5 cut(s) 253, 979, 1596, 1979, 2705
BmuI ACTGGG 1 cut(s) 1076
BpiI GAAGAC 2 cut(s) 1709, 2764
BpmI CTGGAG 5 cut(s) 962, 1250, 1629, 2308, 2655
Bpu10I CCTNAGC 1 cut(s) 2966
Bpu1102I GCTNAGC 1 cut(s) 2584
Bpu14I TTCGAA 1 cut(s) 1852
BpuEI CTTGAG 2 cut(s) 223, 563
BpuMI CCSGG 1 cut(s) 464
BsaHI GRCGYC 1 cut(s) 1251
BsaJI CCNNGG 8 cut(s) 17, 340, 523, 594, 1047, 1221, 1582, 1872
BsaWI WCCGGW 2 cut(s) 1618, 2292
BsaXI ACNNNNNCTCC 4 cut(s) 440, 470, 2991, 3021
Bsc4I CCNNNNNNNGG 9 cut(s) 308, 524, 596, 812, 1118, 1412, 1549, 1841, 2086
Bse118I RCCGGY 1 cut(s) 1535
Bse1I ACTGG 7 cut(s) 221, 313, 443, 1071, 1612, 2122, 3027
Bse3DI GCAATG 3 cut(s) 121, 2275, 2542
BseAI TCCGGA 1 cut(s) 1618
BseBI CCWGG 3 cut(s) 19, 1229, 2823
BseDI CCNNGG 8 cut(s) 17, 340, 523, 594, 1047, 1221, 1582, 1872
BseGI GGATG 6 cut(s) 608, 1043, 1868, 1994, 3060, 3073
BseLI CCNNNNNNNGG 9 cut(s) 308, 524, 596, 812, 1118, 1412, 1549, 1841, 2086
BseMI GCAATG 3 cut(s) 121, 2275, 2542
BseMII CTCAG 6 cut(s) 461, 548, 914, 1286, 2639, 3045
BseNI ACTGG 7 cut(s) 221, 313, 443, 1071, 1612, 2122, 3027
BseRI GAGGAG 4 cut(s) 677, 2044, 2253, 2408
BseXI GCAGC 9 cut(s) 385, 1071, 1272, 1551, 2018, 2306, 2388, 2653, 2836
BsgI GTGCAG 2 cut(s) 2387, 2855
Bsh1285I CGRYCG 1 cut(s) 127
BshFI GGCC 6 cut(s) 402, 672, 816, 1124, 1227, 1755
BshNI GGYRCC 3 cut(s) 1250, 1831, 2289
BsiEI CGRYCG 1 cut(s) 127
BsiHKAI GWGCWC 1 cut(s) 2138
BsiSI CCGG 5 cut(s) 464, 1536, 1619, 2287, 2293
BslFI GGGAC 2 cut(s) 641, 3092
BslI CCNNNNNNNGG 9 cut(s) 308, 524, 596, 812, 1118, 1412, 1549, 1841, 2086
BsmAI GTCTC 3 cut(s) 1771, 2093, 2867
BsmFI GGGAC 2 cut(s) 641, 3092
BsmI GAATGC 2 cut(s) 582, 2270
BsnI GGCC 6 cut(s) 402, 672, 816, 1124, 1227, 1755
Bsp119I TTCGAA 1 cut(s) 1852
Bsp1286I GDGCHC 1 cut(s) 2138
Bsp13I TCCGGA 1 cut(s) 1618
Bsp1720I GCTNAGC 1 cut(s) 2584
BspACI CCGC 7 cut(s) 234, 371, 807, 852, 2121, 2154, 2936
BspANI GGCC 6 cut(s) 402, 672, 816, 1124, 1227, 1755
BspCNI CTCAG 6 cut(s) 462, 549, 913, 1287, 2638, 3044
BspEI TCCGGA 1 cut(s) 1618
BspHI TCATGA 2 cut(s) 10, 2488
BspLI GGNNCC 8 cut(s) 292, 706, 1123, 1252, 1833, 1846, 2291, 3080
BspMAI CTGCAG 3 cut(s) 1776, 2263, 2887
BspMI ACCTGC 2 cut(s) 1779, 2827
BspPI GGATC 3 cut(s) 1177, 2155, 3112
BspQI GCTCTTC 1 cut(s) 2859
BspT104I TTCGAA 1 cut(s) 1852
BspT107I GGYRCC 3 cut(s) 1250, 1831, 2289
BsrDI GCAATG 3 cut(s) 121, 2275, 2542
BsrFI RCCGGY 1 cut(s) 1535
BsrI ACTGG 7 cut(s) 221, 313, 443, 1071, 1612, 2122, 3027
BssAI RCCGGY 1 cut(s) 1535
BssECI CCNNGG 8 cut(s) 17, 340, 523, 594, 1047, 1221, 1582, 1872
BssNAI GTATAC 2 cut(s) 2170, 2999
BssNI GRCGYC 1 cut(s) 1251
BssT1I CCWWGG 7 cut(s) 340, 523, 594, 1047, 1221, 1582, 1872
Bst1107I GTATAC 2 cut(s) 2170, 2999
Bst2UI CCWGG 3 cut(s) 19, 1229, 2823
Bst4CI ACNGT 5 cut(s) 497, 1211, 1904, 1965, 2786
Bst6I CTCTTC 6 cut(s) 1940, 2001, 2859, 2865, 2934, 3044
BstACI GRCGYC 1 cut(s) 1251
BstBI TTCGAA 1 cut(s) 1852
BstC8I GCNNGC 3 cut(s) 1544, 1930, 3028
BstENI CCTNNNNNAGG 1 cut(s) 2084
BstF5I GGATG 6 cut(s) 608, 1043, 1868, 1994, 3060, 3073
BstH2I RGCGCY 1 cut(s) 1254
BstHHI GCGC 3 cut(s) 393, 1253, 1865
BstMAI GTCTC 3 cut(s) 1771, 2093, 2867
BstMCI CGRYCG 1 cut(s) 127
BstMWI GCNNNNNNNGC 5 cut(s) 399, 1641, 2160, 2325, 2858
BstNI CCWGG 3 cut(s) 19, 1229, 2823
BstNSI RCATGY 5 cut(s) 427, 826, 1932, 2987, 3030
BstSCI CCNGG 4 cut(s) 17, 462, 1227, 2821
BstSFI CTRYAG 5 cut(s) 1772, 1961, 2058, 2259, 2883
BstV1I GCAGC 9 cut(s) 385, 1071, 1272, 1551, 2018, 2306, 2388, 2653, 2836
BstV2I GAAGAC 2 cut(s) 1709, 2764
BstX2I RGATCY 5 cut(s) 964, 973, 1729, 2307, 3117
BstYI RGATCY 5 cut(s) 964, 973, 1729, 2307, 3117
BstZ17I GTATAC 2 cut(s) 2170, 2999
BsuRI GGCC 6 cut(s) 402, 672, 816, 1124, 1227, 1755
BtgZI GCGATG 1 cut(s) 1351
BtsCI GGATG 6 cut(s) 608, 1043, 1868, 1994, 3060, 3073
BtsI GCAGTG 2 cut(s) 2256, 2515
BtsIMutI CAGTG 5 cut(s) 162, 306, 1216, 2256, 2515
BveI ACCTGC 2 cut(s) 1779, 2827
Cac8I GCNNGC 3 cut(s) 1544, 1930, 3028
CaiI CAGNNNCTG 1 cut(s) 2882
CciI TCATGA 2 cut(s) 10, 2488
CfoI GCGC 3 cut(s) 393, 1253, 1865
Cfr10I RCCGGY 1 cut(s) 1535
Cfr13I GGNCC 5 cut(s) 330, 400, 1122, 1225, 3079
CseI GACGC 2 cut(s) 2855, 2987
Csp6I GTAC 3 cut(s) 844, 1832, 2677
CspCI CAANNNNNGTGG 2 cut(s) 576, 611
CviQI GTAC 3 cut(s) 844, 1832, 2677
DinI GGCGCC 1 cut(s) 1252
Eam1104I CTCTTC 6 cut(s) 1940, 2001, 2859, 2865, 2934, 3044
EarI CTCTTC 6 cut(s) 1940, 2001, 2859, 2865, 2934, 3044
EciI GGCGGA 2 cut(s) 867, 2136
Eco130I CCWWGG 7 cut(s) 340, 523, 594, 1047, 1221, 1582, 1872
Eco147I AGGCCT 1 cut(s) 816
Eco47I GGWCC 2 cut(s) 330, 3079
Eco57I CTGAAG 2 cut(s) 1586, 1703
EcoNI CCTNNNNNAGG 1 cut(s) 2084
EcoO109I RGGNCCY 1 cut(s) 3079
EcoRI GAATTC 3 cut(s) 438, 2178, 2348
EcoRII CCWGG 3 cut(s) 17, 1227, 2821
EcoT14I CCWWGG 7 cut(s) 340, 523, 594, 1047, 1221, 1582, 1872
EgeI GGCGCC 1 cut(s) 1252
EheI GGCGCC 1 cut(s) 1252
ErhI CCWWGG 7 cut(s) 340, 523, 594, 1047, 1221, 1582, 1872
FalI AAGNNNNNCTT 2 cut(s) 2166, 2198
FaqI GGGAC 2 cut(s) 641, 3092
FauI CCCGC 1 cut(s) 814
FbaI TGATCA 1 cut(s) 2185
FblI GTMKAC 3 cut(s) 2061, 2169, 2998
FokI GGATG 6 cut(s) 595, 1030, 1855, 2001, 3067, 3080
FspBI CTAG 8 cut(s) 173, 380, 629, 1007, 1593, 1661, 2360, 2589
FspI TGCGCA 1 cut(s) 392
GlaI GCGC 3 cut(s) 392, 1252, 1864
GsuI CTGGAG 5 cut(s) 962, 1250, 1629, 2308, 2655
HaeII RGCGCY 1 cut(s) 1254
HaeIII GGCC 6 cut(s) 402, 672, 816, 1124, 1227, 1755
HapII CCGG 5 cut(s) 464, 1536, 1619, 2287, 2293
HgaI GACGC 2 cut(s) 2855, 2987
HhaI GCGC 3 cut(s) 393, 1253, 1865
Hin1I GRCGYC 1 cut(s) 1251
Hin6I GCGC 3 cut(s) 391, 1251, 1863
HinP1I GCGC 3 cut(s) 391, 1251, 1863
HincII GTYRAC 3 cut(s) 448, 1134, 1900
HindII GTYRAC 3 cut(s) 448, 1134, 1900
HindIII AAGCTT 2 cut(s) 539, 682
HpaII CCGG 5 cut(s) 464, 1536, 1619, 2287, 2293
HphI GGTGA 7 cut(s) 291, 547, 1037, 1838, 2585, 3033, 3125
Hpy99I CGWCG 1 cut(s) 851
HpyCH4III ACNGT 5 cut(s) 497, 1211, 1904, 1965, 2786
HpyCH4IV ACGT 2 cut(s) 654, 846
HpyF10VI GCNNNNNNNGC 5 cut(s) 399, 1641, 2160, 2325, 2858
HpySE526I ACGT 2 cut(s) 654, 846
Hsp92I GRCGYC 1 cut(s) 1251
HspAI GCGC 3 cut(s) 391, 1251, 1863
KasI GGCGCC 1 cut(s) 1250
Kpn2I TCCGGA 1 cut(s) 1618
KpnI GGTACC 1 cut(s) 1835
Ksp22I TGATCA 1 cut(s) 2185
LguI GCTCTTC 1 cut(s) 2859
LmnI GCTCC 5 cut(s) 4, 1844, 2240, 2327, 2674
Lsp1109I GCAGC 9 cut(s) 385, 1071, 1272, 1551, 2018, 2306, 2388, 2653, 2836
LweI GCATC 5 cut(s) 253, 979, 1596, 1979, 2705
MaeI CTAG 8 cut(s) 173, 380, 629, 1007, 1593, 1661, 2360, 2589
MaeII ACGT 2 cut(s) 654, 846
MaeIII GTNAC 5 cut(s) 416, 995, 1025, 1085, 1275
MfeI CAATTG 2 cut(s) 386, 1355
MflI RGATCY 5 cut(s) 964, 973, 1729, 2307, 3117
MhlI GDGCHC 1 cut(s) 2138
Mly113I GGCGCC 1 cut(s) 1251
MlyI GAGTC 7 cut(s) 191, 481, 770, 2057, 2586, 2621, 3032
MmeI TCCRAC 2 cut(s) 408, 1858
MroI TCCGGA 1 cut(s) 1618
MroXI GAANNNNTTC 3 cut(s) 80, 604, 1015
MseI TTAA 5 cut(s) 744, 789, 2069, 2600, 2808
MslI CAYNNNNRTG 4 cut(s) 987, 2571, 2922, 2986
MspI CCGG 5 cut(s) 464, 1536, 1619, 2287, 2293
MspR9I CCNGG 4 cut(s) 19, 464, 1229, 2823
MunI CAATTG 2 cut(s) 386, 1355
Mva1269I GAATGC 2 cut(s) 582, 2270
MvaI CCWGG 3 cut(s) 19, 1229, 2823
MwoI GCNNNNNNNGC 5 cut(s) 399, 1641, 2160, 2325, 2858
NarI GGCGCC 1 cut(s) 1251
NciI CCSGG 1 cut(s) 464
NlaIV GGNNCC 8 cut(s) 292, 706, 1123, 1252, 1833, 1846, 2291, 3080
NmuCI GTSAC 3 cut(s) 416, 995, 1025
NsbI TGCGCA 1 cut(s) 392
NspI RCATGY 5 cut(s) 427, 826, 1932, 2987, 3030
NspV TTCGAA 1 cut(s) 1852
OliI CACNNNNGTG 1 cut(s) 2986
PaeI GCATGC 2 cut(s) 1932, 3030
PagI TCATGA 2 cut(s) 10, 2488
PceI AGGCCT 1 cut(s) 816
PciI ACATGT 2 cut(s) 423, 2983
PciSI GCTCTTC 1 cut(s) 2859
PctI GAATGC 2 cut(s) 582, 2270
PdmI GAANNNNTTC 3 cut(s) 80, 604, 1015
PfeI GAWTC 7 cut(s) 152, 367, 409, 1327, 2124, 2296, 2728
PflMI CCANNNNNTGG 2 cut(s) 524, 1412
Ple19I CGATCG 1 cut(s) 127
PleI GAGTC 7 cut(s) 191, 480, 769, 2057, 2586, 2620, 3032
PluTI GGCGCC 1 cut(s) 1254
PpsI GAGTC 7 cut(s) 191, 480, 769, 2057, 2586, 2620, 3032
PpuMI RGGWCCY 1 cut(s) 3079
PscI ACATGT 2 cut(s) 423, 2983
PshBI ATTAAT 1 cut(s) 2069
Psp5II RGGWCCY 1 cut(s) 3079
Psp6I CCWGG 3 cut(s) 17, 1227, 2821
PspGI CCWGG 3 cut(s) 17, 1227, 2821
PspN4I GGNNCC 8 cut(s) 292, 706, 1123, 1252, 1833, 1846, 2291, 3080
PspPI GGNCC 5 cut(s) 330, 400, 1122, 1225, 3079
PspPPI RGGWCCY 1 cut(s) 3079
PsrI GAACNNNNNNTAC 2 cut(s) 930, 962
PstI CTGCAG 3 cut(s) 1776, 2263, 2887
PstNI CAGNNNCTG 1 cut(s) 2882
PsuI RGATCY 5 cut(s) 964, 973, 1729, 2307, 3117
PvuI CGATCG 1 cut(s) 127
RsaI GTAC 3 cut(s) 845, 1833, 2678
RsaNI GTAC 3 cut(s) 844, 1832, 2677
RseI CAYNNNNRTG 4 cut(s) 987, 2571, 2922, 2986
SapI GCTCTTC 1 cut(s) 2859
SaqAI TTAA 5 cut(s) 744, 789, 2069, 2600, 2808
Sau96I GGNCC 5 cut(s) 330, 400, 1122, 1225, 3079
SchI GAGTC 7 cut(s) 191, 481, 770, 2057, 2586, 2621, 3032
ScrFI CCNGG 4 cut(s) 19, 464, 1229, 2823
SduI GDGCHC 1 cut(s) 2138
SfaNI GCATC 5 cut(s) 253, 979, 1596, 1979, 2705
SfcI CTRYAG 5 cut(s) 1772, 1961, 2058, 2259, 2883
SfoI GGCGCC 1 cut(s) 1252
SfuI TTCGAA 1 cut(s) 1852
SinI GGWCC 2 cut(s) 330, 3079
SmiMI CAYNNNNRTG 4 cut(s) 987, 2571, 2922, 2986
SmlI CTYRAG 2 cut(s) 238, 542
SmoI CTYRAG 2 cut(s) 238, 542
SphI GCATGC 2 cut(s) 1932, 3030
SseBI AGGCCT 1 cut(s) 816
SsiI CCGC 7 cut(s) 234, 371, 807, 852, 2121, 2154, 2936
SspDI GGCGCC 1 cut(s) 1250
SspI AATATT 2 cut(s) 1573, 2452
SspMI CTAG 8 cut(s) 173, 380, 629, 1007, 1593, 1661, 2360, 2589
StuI AGGCCT 1 cut(s) 816
StyD4I CCNGG 4 cut(s) 17, 462, 1227, 2821
StyI CCWWGG 7 cut(s) 340, 523, 594, 1047, 1221, 1582, 1872
TaaI ACNGT 5 cut(s) 497, 1211, 1904, 1965, 2786
TaiI ACGT 2 cut(s) 657, 849
TaqI TCGA 4 cut(s) 127, 475, 987, 1852
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 7 cut(s) 152, 367, 409, 1327, 2124, 2296, 2728
Tru1I TTAA 5 cut(s) 744, 789, 2069, 2600, 2808
Tru9I TTAA 5 cut(s) 744, 789, 2069, 2600, 2808
TscAI CASTG 5 cut(s) 169, 313, 1216, 2263, 2522
TseFI GTSAC 3 cut(s) 416, 995, 1025
TseI GCWGC 9 cut(s) 373, 1059, 1285, 1539, 2006, 2319, 2401, 2666, 2849
Tsp45I GTSAC 3 cut(s) 416, 995, 1025
TspGWI ACGGA 1 cut(s) 1339
TspRI CASTG 5 cut(s) 169, 313, 1216, 2263, 2522
Van91I CCANNNNNTGG 2 cut(s) 524, 1412
VpaK11BI GGWCC 2 cut(s) 330, 3079
VspI ATTAAT 1 cut(s) 2069
XagI CCTNNNNNAGG 1 cut(s) 2084
XbaI TCTAGA 1 cut(s) 1592
XceI RCATGY 5 cut(s) 427, 826, 1932, 2987, 3030
XmiI GTMKAC 3 cut(s) 2061, 2169, 2998
XmnI GAANNNNTTC 3 cut(s) 80, 604, 1015
XspI CTAG 8 cut(s) 173, 380, 629, 1007, 1593, 1661, 2360, 2589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.