FvH4_7g29910
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
21880336 .. 21883963
3628 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g29910.t1

Sequence Viewer

Length: 2718 bp
ATGTGTCCGGAACTGAGCATCATACGTATTGCAGAAAACCGCCTTACCGGCGAGATTCCATCAGAGATGGGCTCGTTGATGAAGCTTGTGGAACTTAACCTTCAGAAGAACTATCTGTCAGGAGGCATCCCACCTTCATTAGGAAATCTTTCCTCAATCACTGCACTTTCCTTGGGAGGGAACAATTTGGTGGGCACAGTCCCAGAGGAGATAGGACGACTGAGAAACCTTTGGTACTTTGGTATACCTATGTGTAAGCTCTCTGGTATGATCCCTCCTTCCCTCTTTAACATATCATCTATGAATGTCTTCTCAGTTACGGGTAATATGTTGAAGGGCAGCATCCCGCCTGGTATAGGCCTAAACATGCCCTATCTCCTAAACATGTCGCTTGGTGGAAATGAATTATCTGGAAAAATCCCTGCCTCATTTTCCAATGCTACTCAACTTCAGAAGCTTGATGTATGGGAAAATAATTTTGTAGGGCAAGTTCCAGAGAGTTTTGGAAATCTTCCCAATATCATTTGGCTCAACTTCGGTAACAATAATCTAGGAAGTAATTCATCCAATGATTTGGAGTTTATAACATTCTTGACAAACTGCACCAATCTTGAGATGCTTTCTTTGACTCAAAACAATTTTGGAGGTGTCTTACCCAACTCCATAGCCAATTTCTCAACCCAACTAACTCAACTCTACCTTGGGAGCAATCAAATAGCGGGAACGATTCCTGAGACAATAGGAAATCTCAACAGTTTAATAGCCTTTGCCCTGGAAGATAACCTGTTCACAGGTATCATTCCAACTTCTTTGGGGAAGTTACAAAAGCTGCAATTATTATCTTTATCTGCCAATAGGTTATCAGGTTGGATCCCATCTTCCTTGGGAAACCTCACTCATTTGTTTCAACTCCTTATATCAGCAAATGAGTTAGAAGGAAGCATTCCTCCAACTATTGGTAACTGCCAAAATCTACAGTGGATGGATTTATCAGACAATAAACTACTTGGTGGATATATACCATCACAGGTCATTGGTCTGTTCTCACTTACCTATCTCAACTTGTCACATAACTCACTAACCGGTAGTCTGCCTGTGGAAGTGGGTAAGCTGAAAAATACCAACACACTGGACATCTCTTATAATAATCTGACCGGAGAAATCCCACAAGCTATTGGAAGCTGTCTGAGCGTTGAATTGCTTTACTTACAAGGAAATCTTTTTCAAAGTATGATACCCTTTTCTTTAGCTTCTTTGAAAGGTCTTCAGTATCTAGATCTTTCTCGGAACAACTTGTCGAGTCAAATTCCAAAAGATCTAAAGAGACTTCCATTTTTGGTATATTTGAATCTTTCATTCAATGATCTGGAGGGTGAGGTACCGAAAGAAGGAGTGTTTCGAAACACAAGTGCAACATCATTGGATGGAAATACAAAACTTTGTGGTGGTGTTCCGGAACTGCAGCTACCAGCATGCCCCATCGTTGTGTTAAAAAAGAGAAAGGTGAATGGTTTCAAACTGAAGCTCACAATTTCTTTCGTCGTTGGATGCTCTCTTCTGTTTGCAGTCCTCTTGGTTTTTTATTGGAGGAGGAAAACTCAAAAGAAGAAACCAATATTTGCAGTATCATCAATCAACTCTCTTTCAAAGGTTTCATACCAGGCACTTCATCAAGCAACTGGCGGATTCTGTCCGAGCAATCAGATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTATTGATGAGGAAGAAAACAACATTGTTGCCATAAAAGTCCTCAACCTTCAACTTAGAGGAGCTTTAAAGAGTTTCATGGCCGAATGCAATGCACTGAGAAATATCCGGCACAGGAATCTTGTGAAGATCTTAACTTGTTGCTCTAGCACAGATCACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTACATGTCAAATGGAAGTTTAGAGGAGAGGTTGCACAGAGAAAACCAATTTGCAGGAAGTTTGAACCTTGTTCAAAGATTGAATATTGCTGTTGATGTGGCGTCTGCATTATGTTATCTTCATGACCATTGTGAACCACAAATCATCCACAGCGACATTAAGCCGAGCAACATTCTTCTTGGTGATGACATGGTTGCTTGTGTAGGTGATTTCGGGTTAGCAAGACTCATATCTATGACCACAGACTCCTCTCAAAATCGAAGTAGCACAACTGGGATAAAGGGAACCATTGGCTATGCTGCTCCAGAGTATGCCAGTGGTGTTGAGCCATCAAGAAAAGGGGATGTATATAGTTATGGGGTCCTGCTGTTGCAAATGTTCACAGGAAGAAAACCTACTGACGAAATGTTTAAAGATGGTTTGAACCTCCATAACTTTGTCAAGATGGCTATACCAGAAAGACTAATGCAGATTGTGGATCCTACTCTTCTTGCCAGTTTAGAAGCAACCACACCTGCAACAACACAAAATGAAGTGAACTACATCCGTGGTTACAACAATGATGAAATCGAAACAGATGAAGAAAACATTGACAGTGAGAATTTAAGCAAGATGAACACTTTTGTATGGAAATGCATACTTCCAAACCTGAAGATTGGACTTGCATGCTCGGAAGAGTCACCAAGTAATAGGATGTCGATGGAGGAGGTCCACAGGGAGCTACAGCGTATCAAAAATGCTTACAATGGTATTGACATCCGTCGAGAGAGGCCAAGAAGAAGCTAA

Protein Analysis

906

Amino Acids

99.29

Weight (kDa)

6.32

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 228 - 287 1.1e-07 Leucine rich repeat
LRR_14 PF23598 316 - 457 5.5e-13 Leucine-rich repeat region
LRR_8 PF13855 349 - 407 9.7e-06 Leucine rich repeat
LRR_8 PF13855 398 - 456 1.5e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 567 - 782 2.4e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 567 - 792 1.4e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 584, 1143
AarI CACCTGC 1 cut(s) 2455
Acc36I ACCTGC 1 cut(s) 2455
Acc65I GGTACC 1 cut(s) 1378
AccB1I GGYRCC 1 cut(s) 1378
AccB7I CCANNNNNTGG 1 cut(s) 956
AccI GTMKAC 2 cut(s) 244, 1731
AccIII TCCGGA 2 cut(s) 7, 1453
AciI CCGC 5 cut(s) 40, 347, 719, 1683, 1716
AclWI GGATC 6 cut(s) 265, 865, 878, 1717, 2405, 2418
AcoI YGGCCR 1 cut(s) 1821
AcsI RAATTY 2 cut(s) 1305, 2533
AcuI CTGAAG 5 cut(s) 86, 434, 1250, 1541, 2603
AcyI GRCGYC 1 cut(s) 2033
AfaI GTAC 3 cut(s) 236, 1380, 1934
AfiI CCNNNNNNNGG 5 cut(s) 140, 177, 356, 956, 1388
AflIII ACRYGT 2 cut(s) 384, 1935
AgeI ACCGGT 1 cut(s) 1082
AjnI CCWGG 3 cut(s) 349, 771, 1659
Alw26I GTCTC 2 cut(s) 728, 1318
AlwI GGATC 6 cut(s) 265, 865, 878, 1717, 2405, 2418
Aor13HI TCCGGA 2 cut(s) 7, 1453
AoxI GGCC 3 cut(s) 358, 1821, 2702
ApeKI GCWGC 4 cut(s) 339, 829, 1462, 2231
ApoI RAATTY 2 cut(s) 1305, 2533
AsiGI ACCGGT 1 cut(s) 1082
Asp700I GAANNNNTTC 4 cut(s) 148, 308, 559, 1511
Asp718I GGTACC 1 cut(s) 1378
AspS9I GGNCC 2 cut(s) 2293, 2641
AsuHPI GGTGA 5 cut(s) 1385, 1516, 2126, 2150, 2604
AsuII TTCGAA 1 cut(s) 1399
AvaII GGWCC 2 cut(s) 2293, 2641
BaeGI GKGCMC 1 cut(s) 197
BaeI ACNNNNGTAYC 2 cut(s) 226, 259
BamHI GGATCC 2 cut(s) 870, 2410
BanI GGYRCC 1 cut(s) 1378
BanII GRGCYC 1 cut(s) 74
BarI GAAGNNNNNNTAC 2 cut(s) 2311, 2343
BbsI GAAGAC 2 cut(s) 301, 1256
BbvI GCAGC 4 cut(s) 351, 816, 1474, 2218
BcgI CGANNNNNNTGC 2 cut(s) 1814, 1848
BciT130I CCWGG 3 cut(s) 351, 773, 1661
BcoDI GTCTC 2 cut(s) 728, 1318
BfaI CTAG 4 cut(s) 551, 1274, 1887, 1922
BfmI CTRYAG 3 cut(s) 974, 1460, 2654
BfuAI ACCTGC 1 cut(s) 2455
BglI GCCNNNNNGGC 1 cut(s) 48
BglII AGATCT 3 cut(s) 1276, 1315, 1869
BisI GCNGC 4 cut(s) 340, 830, 1463, 2232
BlsI GCNGC 4 cut(s) 341, 831, 1464, 2233
Bme1390I CCNGG 3 cut(s) 351, 773, 1661
Bme18I GGWCC 2 cut(s) 2293, 2641
BmgT120I GGNCC 2 cut(s) 2293, 2641
BmiI GGNNCC 5 cut(s) 872, 1380, 2218, 2294, 2412
BmrFI CCNGG 3 cut(s) 351, 773, 1661
BmrI ACTGGG 1 cut(s) 2214
BmsI GCATC 5 cut(s) 27, 135, 351, 606, 1538
BmuI ACTGGG 1 cut(s) 2214
BoxI GACNNNNGTC 1 cut(s) 2691
BpiI GAAGAC 2 cut(s) 301, 1256
BplI GAGNNNNNCTC 4 cut(s) 56, 88, 1582, 1614
BpmI CTGGAG 2 cut(s) 1388, 2220
Bpu14I TTCGAA 1 cut(s) 1399
BpuEI CTTGAG 1 cut(s) 632
BsaAI YACGTR 1 cut(s) 26
BsaHI GRCGYC 1 cut(s) 2033
BsaJI CCNNGG 5 cut(s) 171, 700, 771, 882, 2479
BsaWI WCCGGW 4 cut(s) 7, 1082, 1154, 1453
Bsc4I CCNNNNNNNGG 5 cut(s) 140, 177, 356, 956, 1388
Bse118I RCCGGY 2 cut(s) 47, 1082
Bse1I ACTGG 5 cut(s) 1134, 1684, 2209, 2247, 2427
Bse3DI GCAATG 1 cut(s) 1837
BseAI TCCGGA 2 cut(s) 7, 1453
BseBI CCWGG 3 cut(s) 351, 773, 1661
BseDI CCNNGG 5 cut(s) 171, 700, 771, 882, 2479
BseLI CCNNNNNNNGG 5 cut(s) 140, 177, 356, 956, 1388
BseMI GCAATG 1 cut(s) 1837
BseMII CTCAG 6 cut(s) 5, 212, 327, 723, 1178, 1829
BseNI ACTGG 5 cut(s) 1134, 1684, 2209, 2247, 2427
BseRI GAGGAG 6 cut(s) 221, 1603, 1815, 1970, 2170, 2651
BseSI GKGCMC 1 cut(s) 197
BseXI GCAGC 4 cut(s) 351, 816, 1474, 2218
BsgI GTGCAG 2 cut(s) 147, 586
BshFI GGCC 3 cut(s) 360, 1823, 2704
BshNI GGYRCC 1 cut(s) 1378
BshTI ACCGGT 1 cut(s) 1082
BsiSI CCGG 6 cut(s) 8, 48, 1083, 1155, 1454, 1849
BslFI GGGAC 1 cut(s) 185
BslI CCNNNNNNNGG 5 cut(s) 140, 177, 356, 956, 1388
BsmAI GTCTC 2 cut(s) 728, 1318
BsmFI GGGAC 1 cut(s) 185
BsmI GAATGC 2 cut(s) 942, 1832
BsnI GGCC 3 cut(s) 360, 1823, 2704
Bsp119I TTCGAA 1 cut(s) 1399
Bsp1286I GDGCHC 2 cut(s) 74, 197
Bsp13I TCCGGA 2 cut(s) 7, 1453
Bsp143I GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
BspACI CCGC 5 cut(s) 40, 347, 719, 1683, 1716
BspANI GGCC 3 cut(s) 360, 1823, 2704
BspCNI CTCAG 6 cut(s) 6, 213, 326, 724, 1179, 1830
BspEI TCCGGA 2 cut(s) 7, 1453
BspHI TCATGA 1 cut(s) 2053
BspLI GGNNCC 5 cut(s) 872, 1380, 2218, 2294, 2412
BspMAI CTGCAG 1 cut(s) 1464
BspMI ACCTGC 1 cut(s) 2455
BspPI GGATC 6 cut(s) 265, 865, 878, 1717, 2405, 2418
BspT104I TTCGAA 1 cut(s) 1399
BspT107I GGYRCC 1 cut(s) 1378
BsrDI GCAATG 1 cut(s) 1837
BsrFI RCCGGY 2 cut(s) 47, 1082
BsrI ACTGG 5 cut(s) 1134, 1684, 2209, 2247, 2427
BssAI RCCGGY 2 cut(s) 47, 1082
BssECI CCNNGG 5 cut(s) 171, 700, 771, 882, 2479
BssMI GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
BssNAI GTATAC 2 cut(s) 245, 1732
BssNI GRCGYC 1 cut(s) 2033
BssT1I CCWWGG 3 cut(s) 171, 700, 882
Bst1107I GTATAC 2 cut(s) 245, 1732
Bst2UI CCWGG 3 cut(s) 351, 773, 1661
Bst4CI ACNGT 4 cut(s) 199, 755, 978, 2528
Bst6I CTCTTC 3 cut(s) 1560, 2424, 2601
BstACI GRCGYC 1 cut(s) 2033
BstBAI YACGTR 1 cut(s) 26
BstBI TTCGAA 1 cut(s) 1399
BstC8I GCNNGC 2 cut(s) 1474, 2599
BstDEI CTNAG 7 cut(s) 14, 221, 313, 732, 1187, 1796, 1838
BstDSI CCRYGG 1 cut(s) 2479
BstENI CCTNNNNNAGG 2 cut(s) 138, 354
BstKTI GATC 9 cut(s) 273, 873, 1279, 1318, 1366, 1712, 1872, 1897, 2413
BstMAI GTCTC 2 cut(s) 728, 1318
BstMBI GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
BstMWI GCNNNNNNNGC 3 cut(s) 48, 1188, 1722
BstNI CCWGG 3 cut(s) 351, 773, 1661
BstNSI RCATGY 5 cut(s) 370, 388, 1476, 1939, 2601
BstPAI GACNNNNGTC 1 cut(s) 2691
BstSCI CCNGG 3 cut(s) 349, 771, 1659
BstSFI CTRYAG 3 cut(s) 974, 1460, 2654
BstSLI GKGCMC 1 cut(s) 197
BstSNI TACGTA 1 cut(s) 26
BstV1I GCAGC 4 cut(s) 351, 816, 1474, 2218
BstV2I GAAGAC 2 cut(s) 301, 1256
BstX2I RGATCY 5 cut(s) 870, 1276, 1315, 1869, 2410
BstXI CCANNNNNNTGG 2 cut(s) 574, 1129
BstYI RGATCY 5 cut(s) 870, 1276, 1315, 1869, 2410
BstZ17I GTATAC 2 cut(s) 245, 1732
BsuRI GGCC 3 cut(s) 360, 1823, 2704
BtgI CCRYGG 1 cut(s) 2479
BtsI GCAGTG 1 cut(s) 159
BtsIMutI CAGTG 6 cut(s) 159, 983, 1127, 1835, 2254, 2533
BveI ACCTGC 1 cut(s) 2455
Cac8I GCNNGC 2 cut(s) 1474, 2599
CciI TCATGA 1 cut(s) 2053
Cfr10I RCCGGY 2 cut(s) 47, 1082
Cfr13I GGNCC 2 cut(s) 2293, 2641
CseI GACGC 1 cut(s) 2022
Csp6I GTAC 3 cut(s) 235, 1379, 1933
CspAI ACCGGT 1 cut(s) 1082
CviAII CATG 8 cut(s) 367, 385, 1473, 1819, 1936, 2054, 2122, 2598
CviQI GTAC 3 cut(s) 235, 1379, 1933
DdeI CTNAG 7 cut(s) 14, 221, 313, 732, 1187, 1796, 1838
DpnI GATC 9 cut(s) 272, 872, 1278, 1317, 1365, 1711, 1871, 1896, 2412
DpnII GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
DraI TTTAAA 2 cut(s) 1809, 2344
EaeI YGGCCR 1 cut(s) 1821
Eam1104I CTCTTC 3 cut(s) 1560, 2424, 2601
EarI CTCTTC 3 cut(s) 1560, 2424, 2601
EciI GGCGGA 1 cut(s) 1698
Eco105I TACGTA 1 cut(s) 26
Eco130I CCWWGG 3 cut(s) 171, 700, 882
Eco147I AGGCCT 1 cut(s) 360
Eco24I GRGCYC 1 cut(s) 74
Eco47I GGWCC 2 cut(s) 2293, 2641
Eco57I CTGAAG 5 cut(s) 86, 434, 1250, 1541, 2603
EcoNI CCTNNNNNAGG 2 cut(s) 138, 354
EcoO109I RGGNCCY 1 cut(s) 2293
EcoRII CCWGG 3 cut(s) 349, 771, 1659
EcoT14I CCWWGG 3 cut(s) 171, 700, 882
EcoT22I ATGCAT 1 cut(s) 2570
EcoT38I GRGCYC 1 cut(s) 74
ErhI CCWWGG 3 cut(s) 171, 700, 882
FaeI CATG 8 cut(s) 370, 388, 1476, 1822, 1939, 2057, 2125, 2601
FalI AAGNNNNNCTT 2 cut(s) 1203, 1235
FaqI GGGAC 1 cut(s) 185
FatI CATG 8 cut(s) 366, 384, 1472, 1818, 1935, 2053, 2121, 2597
FauI CCCGC 2 cut(s) 354, 712
FblI GTMKAC 2 cut(s) 244, 1731
Fnu4HI GCNGC 4 cut(s) 340, 830, 1463, 2232
FriOI GRGCYC 1 cut(s) 74
Fsp4HI GCNGC 4 cut(s) 340, 830, 1463, 2232
FspBI CTAG 4 cut(s) 551, 1274, 1887, 1922
GluI GCNGC 4 cut(s) 340, 830, 1463, 2232
GsuI CTGGAG 2 cut(s) 1388, 2220
HaeIII GGCC 3 cut(s) 360, 1823, 2704
HapII CCGG 6 cut(s) 8, 48, 1083, 1155, 1454, 1849
HgaI GACGC 1 cut(s) 2022
Hin1I GRCGYC 1 cut(s) 2033
Hin1II CATG 8 cut(s) 370, 388, 1476, 1822, 1939, 2057, 2125, 2601
HindIII AAGCTT 2 cut(s) 83, 455
HpaII CCGG 6 cut(s) 8, 48, 1083, 1155, 1454, 1849
HphI GGTGA 5 cut(s) 1385, 1516, 2126, 2150, 2604
Hpy166II GTNNAC 7 cut(s) 245, 789, 1732, 2066, 2313, 2470, 2644
Hpy8I GTNNAC 7 cut(s) 245, 789, 1732, 2066, 2313, 2470, 2644
Hpy99I CGWCG 2 cut(s) 1544, 2697
HpyAV CCTTC 7 cut(s) 110, 144, 288, 328, 929, 1382, 1799
HpyCH4III ACNGT 4 cut(s) 199, 755, 978, 2528
HpyCH4IV ACGT 1 cut(s) 25
HpyF10VI GCNNNNNNNGC 3 cut(s) 48, 1188, 1722
HpyF3I CTNAG 7 cut(s) 14, 221, 313, 732, 1187, 1796, 1838
HpySE526I ACGT 1 cut(s) 25
Hsp92I GRCGYC 1 cut(s) 2033
Hsp92II CATG 8 cut(s) 370, 388, 1476, 1822, 1939, 2057, 2125, 2601
Kpn2I TCCGGA 2 cut(s) 7, 1453
KpnI GGTACC 1 cut(s) 1382
Kzo9I GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
LmnI GCTCC 4 cut(s) 705, 1802, 2239, 2650
Lsp1109I GCAGC 4 cut(s) 351, 816, 1474, 2218
LweI GCATC 5 cut(s) 27, 135, 351, 606, 1538
MaeI CTAG 4 cut(s) 551, 1274, 1887, 1922
MaeII ACGT 1 cut(s) 25
MaeIII GTNAC 7 cut(s) 316, 539, 819, 959, 1065, 2483, 2610
MalI GATC 9 cut(s) 272, 872, 1278, 1317, 1365, 1711, 1871, 1896, 2412
MboI GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
MflI RGATCY 5 cut(s) 870, 1276, 1315, 1869, 2410
MhlI GDGCHC 2 cut(s) 74, 197
MlyI GAGTC 5 cut(s) 622, 1309, 2151, 2171, 2618
MmeI TCCRAC 4 cut(s) 827, 848, 974, 1525
Mph1103I ATGCAT 1 cut(s) 2570
MroI TCCGGA 2 cut(s) 7, 1453
MroXI GAANNNNTTC 4 cut(s) 148, 308, 559, 1511
MseI TTAA 9 cut(s) 96, 288, 758, 1490, 1808, 1874, 2091, 2343, 2537
MslI CAYNNNNRTG 2 cut(s) 1484, 2165
MspI CCGG 6 cut(s) 8, 48, 1083, 1155, 1454, 1849
MspR9I CCNGG 3 cut(s) 351, 773, 1661
Mva1269I GAATGC 2 cut(s) 942, 1832
MvaI CCWGG 3 cut(s) 351, 773, 1661
MwoI GCNNNNNNNGC 3 cut(s) 48, 1188, 1722
NdeII GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
NlaIII CATG 8 cut(s) 370, 388, 1476, 1822, 1939, 2057, 2125, 2601
NlaIV GGNNCC 5 cut(s) 872, 1380, 2218, 2294, 2412
NmeAIII GCCGAG 1 cut(s) 2121
NmuCI GTSAC 2 cut(s) 1065, 2610
NsiI ATGCAT 1 cut(s) 2570
NspI RCATGY 5 cut(s) 370, 388, 1476, 1939, 2601
NspV TTCGAA 1 cut(s) 1399
PaeI GCATGC 2 cut(s) 1476, 2601
PagI TCATGA 1 cut(s) 2053
PaqCI CACCTGC 1 cut(s) 2455
PceI AGGCCT 1 cut(s) 360
PciI ACATGT 2 cut(s) 384, 1935
PctI GAATGC 2 cut(s) 942, 1832
PdmI GAANNNNTTC 4 cut(s) 148, 308, 559, 1511
PfeI GAWTC 5 cut(s) 55, 727, 1348, 1686, 1858
PflMI CCANNNNNTGG 1 cut(s) 956
PinAI ACCGGT 1 cut(s) 1082
PkrI GCNGC 4 cut(s) 341, 831, 1464, 2233
PleI GAGTC 5 cut(s) 622, 1308, 2151, 2171, 2617
PpsI GAGTC 5 cut(s) 622, 1308, 2151, 2171, 2617
Ppu21I YACGTR 1 cut(s) 26
PpuMI RGGWCCY 1 cut(s) 2293
PscI ACATGT 2 cut(s) 384, 1935
PshAI GACNNNNGTC 1 cut(s) 2691
PsiI TTATAA 2 cut(s) 584, 1143
Psp5II RGGWCCY 1 cut(s) 2293
Psp6I CCWGG 3 cut(s) 349, 771, 1659
PspGI CCWGG 3 cut(s) 349, 771, 1659
PspN4I GGNNCC 5 cut(s) 872, 1380, 2218, 2294, 2412
PspPI GGNCC 2 cut(s) 2293, 2641
PspPPI RGGWCCY 1 cut(s) 2293
PsrI GAACNNNNNNTAC 4 cut(s) 474, 506, 1449, 1481
PstI CTGCAG 1 cut(s) 1464
PsuI RGATCY 5 cut(s) 870, 1276, 1315, 1869, 2410
RsaI GTAC 3 cut(s) 236, 1380, 1934
RsaNI GTAC 3 cut(s) 235, 1379, 1933
RseI CAYNNNNRTG 2 cut(s) 1484, 2165
SaqAI TTAA 9 cut(s) 96, 288, 758, 1490, 1808, 1874, 2091, 2343, 2537
SatI GCNGC 4 cut(s) 340, 830, 1463, 2232
Sau3AI GATC 9 cut(s) 270, 870, 1276, 1315, 1363, 1709, 1869, 1894, 2410
Sau96I GGNCC 2 cut(s) 2293, 2641
SchI GAGTC 5 cut(s) 622, 1309, 2151, 2171, 2618
ScrFI CCNGG 3 cut(s) 351, 773, 1661
SduI GDGCHC 2 cut(s) 74, 197
SfaNI GCATC 5 cut(s) 27, 135, 351, 606, 1538
SfcI CTRYAG 3 cut(s) 974, 1460, 2654
SfuI TTCGAA 1 cut(s) 1399
SinI GGWCC 2 cut(s) 2293, 2641
SmiMI CAYNNNNRTG 2 cut(s) 1484, 2165
SmlI CTYRAG 1 cut(s) 611
SmoI CTYRAG 1 cut(s) 611
SnaBI TACGTA 1 cut(s) 26
SphI GCATGC 2 cut(s) 1476, 2601
SseBI AGGCCT 1 cut(s) 360
SsiI CCGC 5 cut(s) 40, 347, 719, 1683, 1716
SspI AATATT 2 cut(s) 1617, 2017
SspMI CTAG 4 cut(s) 551, 1274, 1887, 1922
StuI AGGCCT 1 cut(s) 360
StyD4I CCNGG 3 cut(s) 349, 771, 1659
StyI CCWWGG 3 cut(s) 171, 700, 882
TaaI ACNGT 4 cut(s) 199, 755, 978, 2528
TaiI ACGT 1 cut(s) 28
TaqI TCGA 6 cut(s) 1298, 1399, 2191, 2502, 2630, 2695
TatI WGTACW 1 cut(s) 1932
TfiI GAWTC 5 cut(s) 55, 727, 1348, 1686, 1858
Tru1I TTAA 9 cut(s) 96, 288, 758, 1490, 1808, 1874, 2091, 2343, 2537
Tru9I TTAA 9 cut(s) 96, 288, 758, 1490, 1808, 1874, 2091, 2343, 2537
TscAI CASTG 6 cut(s) 166, 983, 1134, 1842, 2254, 2533
TseFI GTSAC 2 cut(s) 1065, 2610
TseI GCWGC 4 cut(s) 339, 829, 1462, 2231
Tsp45I GTSAC 2 cut(s) 1065, 2610
TspGWI ACGGA 2 cut(s) 2468, 2681
TspRI CASTG 6 cut(s) 166, 983, 1134, 1842, 2254, 2533
Van91I CCANNNNNTGG 1 cut(s) 956
VpaK11BI GGWCC 2 cut(s) 2293, 2641
XagI CCTNNNNNAGG 2 cut(s) 138, 354
XapI RAATTY 2 cut(s) 1305, 2533
XbaI TCTAGA 1 cut(s) 1273
XceI RCATGY 5 cut(s) 370, 388, 1476, 1939, 2601
XmiI GTMKAC 2 cut(s) 244, 1731
XmnI GAANNNNTTC 4 cut(s) 148, 308, 559, 1511
XspI CTAG 4 cut(s) 551, 1274, 1887, 1922
Zsp2I ATGCAT 1 cut(s) 2570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.