Rh6AG204000
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
36471779 .. 36475919
4141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG204000.1

Sequence Viewer

Length: 3168 bp
ATGGAGCTTCATAAGCTCAACTTCTGTGCATTTTGGTCTACCTACCTTCATTTCCTGACCACCATTTTCCTTCTCACCAACCTTTTCCAACCTGCCATATTTGCAAATGCATTAAGCAATGAAACAGATCACTTGGCTTTGCTGAAATTCAAAGATTACACAGCCACCAATCCAGATGGGTTGTTGAACTTATGGAATAACTCCATTCACTTCTGCAAATGGCAAGGAATTACTTGTGGCAAACGACATCAAAGAGTAACAGCCTTGAACCTGCAAGGCTATGATCTACATGGAATCATATCACCATACATTGGCAACCTCTCCTTTCTTAGGTTCATCAACCTTCAAAACAACAGCTTCTCGGGCAACATTCCGCAACAAGTTGAACATTTATTCCGACTGCGACATCTCAATCTCAGTAGCAACATGTTGGAAAGGGGAATTCCAGTTAACCTGACCTTATGTGCAGAACTGAGCATCGTAAGTATTGGACAAAACCGCCTTACTGGCAAAATTCCTTCAGAGATTGGATCATTGAGGAAGCTTGAGCATCTCAATCTAGTGGAAAACAGTCTGACAGGACCCATCCCACCTTCCTTGGGAAATCTTTCATCAATCACACAGCTGGCCTTCACATTTAACAATTTGGTGGGAACAATTCCAGAGGAGATAGGCCGATTGAGAAGCTTATCATATTTTGCAGTTGGTCTCAATAATCTCTCTGGTATAATCCCTCCCTCCCTTTTTAACATATCATCTATGAACGTCTTCTCAGTTACGGCTAATAAGTTTAAGGGCAGTATTCCACCTGGTATAGGCTTAAACATGCCTAATCTCCGACAACTGCATCTTGGTGGAAATGAATTCTCTGGACAAATCCCAGCTTCACTTCCCAATGCTTCTCAGATTCAAAAGCTTGATGCTGCAAAAAATAATTTTGTTGGGCAAGTTCCAACAAGTTTTGGAAATTTTCCTAGTCTCCAGGTGCTCAGTTTATTCCACAATAATCTAGGAAGTAATTCATCAAATGATTTGGGATTTATAACATTCTTGACAAATTGCAGCAATCTGGAGATCCTTGCTCTGACTAATAACAAATTTGGAGGTGTTTTACCTAACTCTGTAGCCAATTTCTCAACCCAACTGACTCAACTCTACCTTGGGGGCAATCCAATAGTGGGAACGATTCCTGAAACATTAGGAAATCTCAACAATTTAATACACTTGAGCCTGGACGTAAACTTGCTCACAGGTATCATTCCAGCTTCTTTTGGGAAGTTACAAAAACTGCAAAGATTATATTTAAATTCCAATAGATTATCAGGACGAATCCCATCTTCTCTTGGAAACCTCACCCAATTGGTTGTACTCTATTTATCAGAAAATGAATTAGAAGGAAACATTCATCCAAATATTGGTAACTGCAAAAATCTGCAGGTGATGAATATATCACACAATAAGCTTAGTGGAGATATACCATCACAGGTCATTGGTCTATCCTCCTTTGTCATGCTCAACTTATCGCAAAACTCGCTAACAGGCATTTTTCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTGGACATCTCTGAAAATAATTTGACTGGAGGAATTCCAGAGATTATTGGAGGTTGTCAGAGCCTTGAATTTCTTTACCTACAAGGGAATCACTTTCAAGGAATCATACCTTCTTCTTTGGCTACTTTGAGAGGTCTTCAATATCTAAATCTTTCACGAAACAACTTTTCAGGACTTATTCCAAAAGACCTACAGAGGCTTCCATTCTTGATCTATTTGAACCTTTCATATAATAACCTGGAGGGTGAGGTACCGAAAGAAGGAGTTTTTCGATACACAAGTGCAATGTCATTGGAAGGAAATAGCAAACTTTGTGGTGGTGTTTCGGAATTGCAGCTACCAGCATGCCCCATCAAAGTACCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACAATTTCTGTAGTCGTTGGATGCTCTCTTCTATTTGCAGTGATCATAGCTCTTTATTGGAGGAGAAAAACTCAAAATCATAAACCGCTATCTGCAGTGTCATCAATCAAATTCCTTCCAAAGGTTTCATACCAGACACTTCATCAAGCTACTGGCGGATTCTCTCTGAGCAATCAAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTATTGATCAAGAAGAAAACAAGGTTGTTGCCATAAAGGTCCTCAACCTTCAACATAAAGGAGCTTCCAAGAGTTTCGTGGCAGAATGCAATGCACTAAGAAATATCCAACACAGGAACCTTGTGAAGATCTTAACATGTTGCTCCAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTACATGTCAAATGGAAGTTTAGAGGAGTGGCTACATAGAGAAAACCAATCAAGGAGTTTGAACCTTCTTCAAAGACTGAATATTGCTATTGATGTGGCTTCTGTGTTATGTTATCTTCATGACCATTGTGAACCACAAGTCATTCACTGTGACATGAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTTGCTCATGTTGGTGATTTTGGGTTAGCAAGACTCATCTCAATGACCACGGACTCCTCTCAAAATCAAAGTAGCACAGTTGGGATAAAGGGAACAATTGGCTATGCTGCTCCAGAGTATGCGAGTGGTGTTGAGCCATCAAGAGAAGGGGATGTATATAGTTATGGGGTGCTTGTGTTGGAAATGTTCACAGGAAGAAGACCTATCGACAAAATGTTTAAAGAGGGTTTGAACCTCCATAACTTTGTCAAGATGGCCATACCAGGAAGAGTGATGCAGATTGTAGATCCAACTCTTCTTGCCACTTTAGAAGAGATAGCACCTGCAACATCACAAAATGTAGTGAACTACACCAAAGATTACAATAATGAAATCAAAGCAGTTGAAGAAAACATTGACAATGAGAATTTAAGCAAGATGAACACTTATGTGTGGAAGTGCATACTTCCAACCTTTAAGATTGGACTTGCATGCTCGGAAGAATCACCAATGAATCGAATGTCTATGAATGAGGTCCACAGGAAGCTACACCATATAAAAGATGCTTACACTGGTGTTGACTTCTGTCAAGAAAGCCCAAGAAAAAGTTGA

Protein Analysis

1055

Amino Acids

116.41

Weight (kDa)

8.51

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 1.7e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 89 - 214 1.5e-08 Leucine-rich repeat region
LRR_14 PF23598 319 - 488 2.5e-10 Leucine-rich repeat region
LRR_8 PF13855 381 - 440 4.6e-10 Leucine rich repeat
LRR_8 PF13855 453 - 512 9.5e-06 Leucine rich repeat
LRR_14 PF23598 469 - 608 1.4e-07 Leucine-rich repeat region
LRR_8 PF13855 505 - 560 4.6e-08 Leucine rich repeat
LRR_8 PF13855 549 - 608 8.2e-10 Leucine rich repeat
Pkinase PF00069 716 - 936 1.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 717 - 933 2.1e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1043
AarI CACCTGC 2 cut(s) 1426, 2908
Acc36I ACCTGC 4 cut(s) 100, 279, 1426, 2908
Acc65I GGTACC 1 cut(s) 1834
AccB1I GGYRCC 1 cut(s) 1834
AccB7I CCANNNNNTGG 2 cut(s) 311, 1415
AccI GTMKAC 2 cut(s) 38, 2187
AciI CCGC 5 cut(s) 374, 499, 2069, 2139, 2172
AclWI GGATC 4 cut(s) 538, 1069, 2173, 2858
AcoI YGGCCR 1 cut(s) 2832
AcuI CTGAAG 2 cut(s) 504, 1589
AfaI GTAC 4 cut(s) 1368, 1836, 1944, 2390
AfiI CCNNNNNNNGG 8 cut(s) 311, 330, 599, 815, 1178, 1415, 1844, 2104
AflIII ACRYGT 3 cut(s) 426, 2333, 2391
AjnI CCWGG 5 cut(s) 808, 981, 1230, 1821, 2839
AleI CACNNNNGTG 1 cut(s) 3005
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
Alw21I GWGCWC 1 cut(s) 990
Alw26I GTCTC 2 cut(s) 713, 983
AlwI GGATC 4 cut(s) 538, 1069, 2173, 2858
Ama87I CYCGRG 1 cut(s) 361
AoxI GGCC 3 cut(s) 627, 673, 2832
ApeKI GCWGC 4 cut(s) 923, 1062, 1918, 2684
Asp700I GAANNNNTTC 3 cut(s) 607, 767, 1018
Asp718I GGTACC 1 cut(s) 1834
AspS9I GGNCC 3 cut(s) 581, 2236, 3091
AsuHPI GGTGA 7 cut(s) 67, 294, 1345, 1450, 1841, 2603, 3054
AvaI CYCGRG 1 cut(s) 361
AvaII GGWCC 3 cut(s) 581, 2236, 3091
BaeI ACNNNNGTAYC 2 cut(s) 1849, 1882
BalI TGGCCA 1 cut(s) 2834
BanI GGYRCC 1 cut(s) 1834
BbsI GAAGAC 3 cut(s) 760, 1712, 2782
Bbv12I GWGCWC 1 cut(s) 990
BbvI GCAGC 4 cut(s) 910, 1074, 1930, 2671
BccI CCATC 7 cut(s) 170, 593, 1342, 1486, 1943, 2722, 2824
BceAI ACGGC 1 cut(s) 795
BciT130I CCWGG 5 cut(s) 810, 983, 1232, 1823, 2841
BclI TGATCA 2 cut(s) 2025, 2203
BcoDI GTCTC 2 cut(s) 713, 983
BfaI CTAG 4 cut(s) 560, 975, 1010, 2378
BfmI CTRYAG 5 cut(s) 1122, 1433, 1775, 1992, 2076
BfuAI ACCTGC 4 cut(s) 100, 279, 1426, 2908
BglI GCCNNNNNGGC 1 cut(s) 507
BglII AGATCT 1 cut(s) 2325
BisI GCNGC 4 cut(s) 924, 1063, 1919, 2685
BlsI GCNGC 4 cut(s) 925, 1064, 1920, 2686
Bme1390I CCNGG 5 cut(s) 810, 983, 1232, 1823, 2841
Bme18I GGWCC 3 cut(s) 581, 2236, 3091
BmeT110I CYCGRG 1 cut(s) 361
BmgT120I GGNCC 3 cut(s) 581, 2236, 3091
BmiI GGNNCC 3 cut(s) 583, 1836, 2315
BmrFI CCNGG 5 cut(s) 810, 983, 1232, 1823, 2841
BmsI GCATC 7 cut(s) 486, 559, 856, 910, 1994, 2841, 3109
BoxI GACNNNNGTC 1 cut(s) 3141
BpiI GAAGAC 3 cut(s) 760, 1712, 2782
BplI GAGNNNNNCTC 2 cut(s) 2038, 2070
BpmI CTGGAG 6 cut(s) 965, 1091, 1632, 1844, 2326, 2673
BpuEI CTTGAG 2 cut(s) 566, 1246
BsaI GGTCTC 1 cut(s) 713
BsaJI CCNNGG 3 cut(s) 597, 1159, 2625
Bsc4I CCNNNNNNNGG 8 cut(s) 311, 330, 599, 815, 1178, 1415, 1844, 2104
Bse1I ACTGG 6 cut(s) 446, 511, 1590, 1615, 2140, 3133
Bse3DI GCAATG 4 cut(s) 124, 1875, 2293, 2560
BseBI CCWGG 5 cut(s) 810, 983, 1232, 1823, 2841
BseDI CCNNGG 3 cut(s) 597, 1159, 2625
BseGI GGATG 4 cut(s) 585, 1405, 2009, 2734
BseLI CCNNNNNNNGG 8 cut(s) 311, 330, 599, 815, 1178, 1415, 1844, 2104
BseMI GCAATG 4 cut(s) 124, 1875, 2293, 2560
BseMII CTCAG 6 cut(s) 430, 464, 786, 917, 1003, 2141
BseNI ACTGG 6 cut(s) 446, 511, 1590, 1615, 2140, 3133
BseRI GAGGAG 4 cut(s) 680, 2059, 2426, 2623
BseXI GCAGC 4 cut(s) 910, 1074, 1930, 2671
BseYI CCCAGC 1 cut(s) 880
BsgI GTGCAG 1 cut(s) 486
BshFI GGCC 3 cut(s) 629, 675, 2834
BshNI GGYRCC 1 cut(s) 1834
BsiHKAI GWGCWC 1 cut(s) 990
BsiHKCI CYCGRG 1 cut(s) 361
BslI CCNNNNNNNGG 8 cut(s) 311, 330, 599, 815, 1178, 1415, 1844, 2104
BsmAI GTCTC 2 cut(s) 713, 983
BsmI GAATGC 1 cut(s) 2288
BsnI GGCC 3 cut(s) 629, 675, 2834
Bso31I GGTCTC 1 cut(s) 713
BsoBI CYCGRG 1 cut(s) 361
Bsp1286I GDGCHC 1 cut(s) 990
BspACI CCGC 5 cut(s) 374, 499, 2069, 2139, 2172
BspANI GGCC 3 cut(s) 629, 675, 2834
BspCNI CTCAG 6 cut(s) 429, 465, 785, 916, 1002, 2142
BspHI TCATGA 1 cut(s) 2506
BspLI GGNNCC 3 cut(s) 583, 1836, 2315
BspMAI CTGCAG 2 cut(s) 1437, 2080
BspMI ACCTGC 4 cut(s) 100, 279, 1426, 2908
BspPI GGATC 4 cut(s) 538, 1069, 2173, 2858
BspT107I GGYRCC 1 cut(s) 1834
BspTNI GGTCTC 1 cut(s) 713
BsrDI GCAATG 4 cut(s) 124, 1875, 2293, 2560
BsrI ACTGG 6 cut(s) 446, 511, 1590, 1615, 2140, 3133
BssECI CCNNGG 3 cut(s) 597, 1159, 2625
BssNAI GTATAC 1 cut(s) 2188
BssT1I CCWWGG 2 cut(s) 597, 1159
Bst1107I GTATAC 1 cut(s) 2188
Bst2UI CCWGG 5 cut(s) 810, 983, 1232, 1823, 2841
Bst4CI ACNGT 3 cut(s) 572, 2537, 2656
Bst6I CTCTTC 4 cut(s) 2016, 2839, 2877, 2883
BstC8I GCNNGC 3 cut(s) 627, 1930, 3049
BstDEI CTNAG 9 cut(s) 329, 416, 473, 772, 903, 989, 1463, 2150, 2294
BstDSI CCRYGG 1 cut(s) 2625
BstENI CCTNNNNNAGG 3 cut(s) 328, 813, 2102
BstF5I GGATG 4 cut(s) 585, 1405, 2009, 2734
BstMAI GTCTC 2 cut(s) 713, 983
BstMWI GCNNNNNNNGC 6 cut(s) 13, 101, 363, 507, 1531, 2178
BstNI CCWGG 5 cut(s) 810, 983, 1232, 1823, 2841
BstNSI RCATGY 6 cut(s) 430, 829, 1932, 2337, 2395, 3051
BstPAI GACNNNNGTC 1 cut(s) 3141
BstSCI CCNGG 5 cut(s) 808, 981, 1230, 1821, 2839
BstSFI CTRYAG 5 cut(s) 1122, 1433, 1775, 1992, 2076
BstV1I GCAGC 4 cut(s) 910, 1074, 1930, 2671
BstV2I GAAGAC 3 cut(s) 760, 1712, 2782
BstX2I RGATCY 3 cut(s) 1074, 2325, 2863
BstYI RGATCY 3 cut(s) 1074, 2325, 2863
BstZ17I GTATAC 1 cut(s) 2188
BsuRI GGCC 3 cut(s) 629, 675, 2834
BtgI CCRYGG 1 cut(s) 2625
BtsCI GGATG 4 cut(s) 585, 1405, 2009, 2734
BtsI GCAGTG 2 cut(s) 2028, 2085
BtsIMutI CAGTG 5 cut(s) 1583, 2028, 2085, 2533, 3126
BveI ACCTGC 4 cut(s) 100, 279, 1426, 2908
Cac8I GCNNGC 3 cut(s) 627, 1930, 3049
CciI TCATGA 1 cut(s) 2506
Cfr13I GGNCC 3 cut(s) 581, 2236, 3091
CsiI ACCWGGT 1 cut(s) 808
Csp6I GTAC 4 cut(s) 1367, 1835, 1943, 2389
CspCI CAANNNNNGTGG 4 cut(s) 579, 614, 1879, 1914
CviQI GTAC 4 cut(s) 1367, 1835, 1943, 2389
DdeI CTNAG 9 cut(s) 329, 416, 473, 772, 903, 989, 1463, 2150, 2294
DraI TTTAAA 2 cut(s) 1305, 2797
EaeI YGGCCR 1 cut(s) 2832
Eam1104I CTCTTC 4 cut(s) 2016, 2839, 2877, 2883
EarI CTCTTC 4 cut(s) 2016, 2839, 2877, 2883
EciI GGCGGA 1 cut(s) 2154
Eco130I CCWWGG 2 cut(s) 597, 1159
Eco31I GGTCTC 1 cut(s) 713
Eco47I GGWCC 3 cut(s) 581, 2236, 3091
Eco57I CTGAAG 2 cut(s) 504, 1589
Eco88I CYCGRG 1 cut(s) 361
EcoNI CCTNNNNNAGG 3 cut(s) 328, 813, 2102
EcoO109I RGGNCCY 2 cut(s) 581, 2236
EcoRI GAATTC 3 cut(s) 441, 863, 1617
EcoRII CCWGG 5 cut(s) 808, 981, 1230, 1821, 2839
EcoT14I CCWWGG 2 cut(s) 597, 1159
EcoT22I ATGCAT 1 cut(s) 112
ErhI CCWWGG 2 cut(s) 597, 1159
FalI AAGNNNNNCTT 1 cut(s) 37
FbaI TGATCA 2 cut(s) 2025, 2203
FblI GTMKAC 2 cut(s) 38, 2187
Fnu4HI GCNGC 4 cut(s) 924, 1063, 1919, 2685
FokI GGATG 4 cut(s) 572, 1392, 2016, 2741
Fsp4HI GCNGC 4 cut(s) 924, 1063, 1919, 2685
FspBI CTAG 4 cut(s) 560, 975, 1010, 2378
GluI GCNGC 4 cut(s) 924, 1063, 1919, 2685
GsaI CCCAGC 1 cut(s) 884
GsuI CTGGAG 6 cut(s) 965, 1091, 1632, 1844, 2326, 2673
HaeIII GGCC 3 cut(s) 629, 675, 2834
HincII GTYRAC 2 cut(s) 451, 3136
HindII GTYRAC 2 cut(s) 451, 3136
HindIII AAGCTT 4 cut(s) 542, 685, 914, 1460
HpaI GTTAAC 1 cut(s) 451
HphI GGTGA 7 cut(s) 67, 294, 1345, 1450, 1841, 2603, 3054
HpyCH4III ACNGT 3 cut(s) 572, 2537, 2656
HpyCH4IV ACGT 2 cut(s) 765, 1236
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 101, 363, 507, 1531, 2178
HpyF3I CTNAG 9 cut(s) 329, 416, 473, 772, 903, 989, 1463, 2150, 2294
HpySE526I ACGT 2 cut(s) 765, 1236
KpnI GGTACC 1 cut(s) 1838
Ksp22I TGATCA 2 cut(s) 2025, 2203
KspAI GTTAAC 1 cut(s) 451
LmnI GCTCC 4 cut(s) 4, 2258, 2345, 2692
Lsp1109I GCAGC 4 cut(s) 910, 1074, 1930, 2671
LweI GCATC 7 cut(s) 486, 559, 856, 910, 1994, 2841, 3109
MabI ACCWGGT 1 cut(s) 808
MaeI CTAG 4 cut(s) 560, 975, 1010, 2378
MaeII ACGT 2 cut(s) 765, 1236
MaeIII GTNAC 5 cut(s) 256, 775, 1278, 1418, 2537
MfeI CAATTG 2 cut(s) 1358, 2673
MflI RGATCY 3 cut(s) 1074, 2325, 2863
MhlI GDGCHC 1 cut(s) 990
MlsI TGGCCA 1 cut(s) 2834
MluNI TGGCCA 1 cut(s) 2834
MlyI GAGTC 3 cut(s) 1141, 2604, 2624
Mox20I TGGCCA 1 cut(s) 2834
Mph1103I ATGCAT 1 cut(s) 112
MroXI GAANNNNTTC 3 cut(s) 607, 767, 1018
MscI TGGCCA 1 cut(s) 2834
MslI CAYNNNNRTG 4 cut(s) 852, 2589, 2618, 3005
Msp20I TGGCCA 1 cut(s) 2834
MspA1I CMGCKG 1 cut(s) 625
MspR9I CCNGG 5 cut(s) 810, 983, 1232, 1823, 2841
MunI CAATTG 2 cut(s) 1358, 2673
Mva1269I GAATGC 1 cut(s) 2288
MvaI CCWGG 5 cut(s) 810, 983, 1232, 1823, 2841
MwoI GCNNNNNNNGC 6 cut(s) 13, 101, 363, 507, 1531, 2178
NlaIV GGNNCC 3 cut(s) 583, 1836, 2315
NmeAIII GCCGAG 1 cut(s) 2574
NmuCI GTSAC 1 cut(s) 2537
NsiI ATGCAT 1 cut(s) 112
NspI RCATGY 6 cut(s) 430, 829, 1932, 2337, 2395, 3051
OliI CACNNNNGTG 1 cut(s) 3005
PaeI GCATGC 2 cut(s) 1932, 3051
PagI TCATGA 1 cut(s) 2506
PaqCI CACCTGC 2 cut(s) 1426, 2908
PciI ACATGT 3 cut(s) 426, 2333, 2391
PctI GAATGC 1 cut(s) 2288
PdmI GAANNNNTTC 3 cut(s) 607, 767, 1018
PfeI GAWTC 9 cut(s) 294, 907, 1186, 1329, 1672, 1686, 2142, 3059, 3070
PflMI CCANNNNNTGG 2 cut(s) 311, 1415
PkrI GCNGC 4 cut(s) 925, 1064, 1920, 2686
PleI GAGTC 3 cut(s) 1141, 2604, 2624
PpsI GAGTC 3 cut(s) 1141, 2604, 2624
PpuMI RGGWCCY 2 cut(s) 581, 2236
PscI ACATGT 3 cut(s) 426, 2333, 2391
PshAI GACNNNNGTC 1 cut(s) 3141
PsiI TTATAA 1 cut(s) 1043
Psp5II RGGWCCY 2 cut(s) 581, 2236
Psp6I CCWGG 5 cut(s) 808, 981, 1230, 1821, 2839
PspFI CCCAGC 1 cut(s) 880
PspGI CCWGG 5 cut(s) 808, 981, 1230, 1821, 2839
PspN4I GGNNCC 3 cut(s) 583, 1836, 2315
PspPI GGNCC 3 cut(s) 581, 2236, 3091
PspPPI RGGWCCY 2 cut(s) 581, 2236
PstI CTGCAG 2 cut(s) 1437, 2080
PsuI RGATCY 3 cut(s) 1074, 2325, 2863
PvuII CAGCTG 1 cut(s) 625
RsaI GTAC 4 cut(s) 1368, 1836, 1944, 2390
RsaNI GTAC 4 cut(s) 1367, 1835, 1943, 2389
RseI CAYNNNNRTG 4 cut(s) 852, 2589, 2618, 3005
SatI GCNGC 4 cut(s) 924, 1063, 1919, 2685
Sau96I GGNCC 3 cut(s) 581, 2236, 3091
SchI GAGTC 3 cut(s) 1141, 2604, 2624
ScrFI CCNGG 5 cut(s) 810, 983, 1232, 1823, 2841
SduI GDGCHC 1 cut(s) 990
SexAI ACCWGGT 1 cut(s) 808
SfaNI GCATC 7 cut(s) 486, 559, 856, 910, 1994, 2841, 3109
SfcI CTRYAG 5 cut(s) 1122, 1433, 1775, 1992, 2076
SinI GGWCC 3 cut(s) 581, 2236, 3091
SmiI ATTTAAAT 1 cut(s) 1305
SmiMI CAYNNNNRTG 4 cut(s) 852, 2589, 2618, 3005
SmlI CTYRAG 2 cut(s) 545, 1225
SmoI CTYRAG 2 cut(s) 545, 1225
SphI GCATGC 2 cut(s) 1932, 3051
SsiI CCGC 5 cut(s) 374, 499, 2069, 2139, 2172
SspI AATATT 2 cut(s) 1414, 2470
SspMI CTAG 4 cut(s) 560, 975, 1010, 2378
StyD4I CCNGG 5 cut(s) 808, 981, 1230, 1821, 2839
StyI CCWWGG 2 cut(s) 597, 1159
SwaI ATTTAAAT 1 cut(s) 1305
TaaI ACNGT 3 cut(s) 572, 2537, 2656
TaiI ACGT 2 cut(s) 768, 1239
TaqI TCGA 3 cut(s) 1855, 2784, 3073
TatI WGTACW 2 cut(s) 1366, 2388
TfiI GAWTC 9 cut(s) 294, 907, 1186, 1329, 1672, 1686, 2142, 3059, 3070
TscAI CASTG 5 cut(s) 1590, 2028, 2085, 2540, 3133
TseFI GTSAC 1 cut(s) 2537
TseI GCWGC 4 cut(s) 923, 1062, 1918, 2684
Tsp45I GTSAC 1 cut(s) 2537
TspGWI ACGGA 1 cut(s) 2642
TspRI CASTG 5 cut(s) 1590, 2028, 2085, 2540, 3133
Van91I CCANNNNNTGG 2 cut(s) 311, 1415
VpaK11BI GGWCC 3 cut(s) 581, 2236, 3091
XagI CCTNNNNNAGG 3 cut(s) 328, 813, 2102
XceI RCATGY 6 cut(s) 430, 829, 1932, 2337, 2395, 3051
XcmI CCANNNNNNNNNTGG 1 cut(s) 2272
XmiI GTMKAC 2 cut(s) 38, 2187
XmnI GAANNNNTTC 3 cut(s) 607, 767, 1018
XspI CTAG 4 cut(s) 560, 975, 1010, 2378
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.