RLG00000028851
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
29293326 .. 29296434
3109 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028851

Sequence Viewer

Length: 2625 bp
ATGAAACTTGTGTATCTTGATATTACGGGAAACAATCTGACAGGAGGCATCCCACCTTCCCTGGGAAATCTTTCATCAATCACATACCTTTCCTTCCAAGAGAACAATTTGGTGGGTACCGTTCCAGAGGTGCTAGGCCGACTGAGAAGCTTATCAATGTTTGCAATTGGTCGCAATAATCTCTCTGGTTTGATCCTTCCCTCCCTTTTTAACATATCATCTATGAACGTCGTCTCAATTCCAATTAATAAATTTAAGGGCAATATTCCACCTGAGAACAAGGCTAATCTCCAAAAACTATATCTTGGTGACAATGAATTCTCAGGCCAAATCCCAGCTTCATTTTCCAATGCTTCTCAGCTTCAGATACTTGATGCTGGAGTAAATAATTTTGTTGGTCAAATTCCCGCAAGTTTTGGAAATTTTCCCAATCTCCAGTGGCTCAGCTTCGAGGTCAACAATCTAGGAAGTAATTCATCAAATGATTTGGAATTTATAACATCCTTGTCAAATTGCAGCAATCTGGAGATGCTTTCTCTAAGTATTAACAACTTTGGAGGTGTTTTACCCAACTCTGTAGCCAATTTCTCAACCCAACTGACTCTACTCTACCTTGGGGGCAATCAAATAGCGGGAATGATTCCTGAAACATTAGGAAATCTAAATAATTTAATACTCTTGACCCTGGAAGAAAACTTGTTCACAGGTACCATTCCAGCTTCTTTTGGGAAGTTACAAAAGTTGCAAATGTTACATTTATTTTCTAATAGATTATCAGGTCGGATCCCATCTTCCTTAGGAAACCTCACCCAATTATCTCAACTCTACTTAGACGCTAATGAATTAGAAGGAAGCATTCCTCCAAATATTGGTAACTGCAAAAATCTGCAGCAGATGGATATATCAGACAATAAGCTTAGTGGAGATATACCACCACAGGTCATTGGTCTGTCCTCCTTCTCTGTCTTGCTCAACTTATCGCAAAACTCGCTAACTGGCATTCTGCCTGTCGAAGTGGGTAAGCTGAAGAATATGAATACACTAGACATCTCTGATAATAATTTGATCGGAGGAATTCCAGATATTATTGGAGGCTGTCTGAGCCTTGAATTTCTTTACCTACAAGGGAACCACTTTCAAGGAATCATACCTTCTTCATTGGCTTCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGAAACAACTTGTCAGGACATATTCCAAAAGACCTACAGAGGCTTCCATTCTTGATCTATTTGAACCTTTCGTTCAATAATCTGGAGGGTGAGGTACCGAAAGAAAGAGTTTTTCGAAACACAAGTGCAATATCATTGGATGGAAATATCAAACTTTGTGGTGGTATTTCAAAATTGCAGCTACCAACATGTCCCATCAAAGTCCCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACATTTTCTTTAGTCGCAGGATGCTCTCTTTTGTTTGTAGTCATCTTTGCAATTTATTGGAGGAGAAAAACTCAAAAGAAGAAACCATTATCTACAGTGTCATCAATCAACTTCCTTTCAAAGGTTTCATACCAGACACTTCATCAAGCTACTGGCGGATTCTCCCTGAGCAATCAAATTGGATCAGGCGGCTTTGGCTCTGTATACAAAGGGATTATCAATCAAGAAGAAAACAATTTTGTTGCAATAAAGGTCCTCAACCTTCAACAGAAAGGAGCTTCTAAGAGTTTCTTGGCTGAATGCAATGCACTGAGAAATATCCGGCACAGGAATCTTGTGAAGATCTTAACATGTTGCTCCAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTATGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAAAGAAAACCAATCAAGGAGTTTGAACCTTCTTCAAAGACTGAATATTGCTGTTGATGTGGCTTCTACATTGTGTTATCTTCATGACTATTGTGAACCACAAATCATTCACTGCGACATGAAGCCGGGCAACATTCTTCTTGATGATGACATGATTGCTCGTGTTGGTGATTTTGGGTTAGCAAGACTCATCTCAACTATCACAGACTCCTCTCAAAATCAAAGTAGCACGGTTGGAATAAAGGGAACCATTGGCTATGCTGCTCCAGAGTATGCTAGTGGTGCTGAGCCATCAAGACAAGGAGATGTATATAGTTATGGGGTGCTCGTGTTGCAAATGTTCACAGGAAGAAAACCAATCGACAAAATGTTTAAAGAGGGTTTGAACCTCCGTAACTTTGTCAAGATGGCCATACCAGAAAGAGTGATGCAGATTGTAGACCCTACTCTTCTTGCCACTTTAGAAGAGAGAGCACCTGCAACATCACAAAATGTAGTGAACTACATCAGTGGTTACAATAATGAAATCGAAGCAGTTGAAGAAAACATTGACAATGAGAATTTAAGCAAGATGAACACTTATGTAAGGAAGTGCATACTTCCAACCCTTCAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGAATGTCTATGGAGGAGGTCCACAGGAAACTACACCATATAAAAGATGCTTACACTGGTGTTGATGTCTGTCAAGAAAGGCCAAGAAGAGGCTAA

Protein Analysis

875

Amino Acids

96.15

Weight (kDa)

8.04

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 162 - 277 4e-08 Leucine-rich repeat region
LRR_8 PF13855 199 - 258 7.6e-09 Leucine rich repeat
LRR_14 PF23598 325 - 429 2.5e-07 Leucine-rich repeat region
LRR_8 PF13855 369 - 427 1.8e-09 Leucine rich repeat
Pkinase PF00069 535 - 757 6.8e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 536 - 753 3e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 497
AarI CACCTGC 1 cut(s) 2365
Acc36I ACCTGC 1 cut(s) 2365
Acc65I GGTACC 3 cut(s) 116, 707, 1291
AccB1I GGYRCC 3 cut(s) 116, 707, 1291
AccB7I CCANNNNNTGG 1 cut(s) 869
AccI GTMKAC 2 cut(s) 1644, 2319
AciI CCGC 4 cut(s) 408, 632, 1596, 1629
AclWI GGATC 4 cut(s) 187, 778, 791, 1630
AcoI YGGCCR 1 cut(s) 2289
AcsI RAATTY 8 cut(s) 251, 317, 402, 421, 491, 1074, 1109, 2440
AcuI CTGAAG 4 cut(s) 347, 1046, 1163, 2474
AfaI GTAC 3 cut(s) 118, 709, 1293
AfiI CCNNNNNNNGG 4 cut(s) 62, 869, 1561, 2618
AflIII ACRYGT 2 cut(s) 1385, 1790
AjnI CCWGG 2 cut(s) 60, 684
Alw21I GWGCWC 2 cut(s) 2208, 2356
Alw26I GTCTC 1 cut(s) 238
AlwI GGATC 4 cut(s) 187, 778, 791, 1630
AoxI GGCC 4 cut(s) 136, 325, 2289, 2609
ApeKI GCWGC 5 cut(s) 516, 889, 1375, 1876, 2141
ApoI RAATTY 8 cut(s) 251, 317, 402, 421, 491, 1074, 1109, 2440
AseI ATTAAT 1 cut(s) 246
Asp700I GAANNNNTTC 2 cut(s) 70, 472
Asp718I GGTACC 3 cut(s) 116, 707, 1291
AspS9I GGNCC 2 cut(s) 1693, 2548
AsuC2I CCSGG 1 cut(s) 2007
AsuHPI GGTGA 5 cut(s) 320, 799, 1298, 2060, 2511
AsuII TTCGAA 1 cut(s) 1312
AvaII GGWCC 2 cut(s) 1693, 2548
AxyI CCTNAGG 1 cut(s) 796
BaeI ACNNNNGTAYC 1 cut(s) 29
BalI TGGCCA 1 cut(s) 2291
BamHI GGATCC 1 cut(s) 783
BanI GGYRCC 3 cut(s) 116, 707, 1291
BauI CACGAG 2 cut(s) 2040, 2207
BbsI GAAGAC 1 cut(s) 1169
Bbv12I GWGCWC 2 cut(s) 2208, 2356
BbvI GCAGC 5 cut(s) 528, 901, 1387, 1863, 2128
BccI CCATC 6 cut(s) 796, 889, 1331, 1400, 2179, 2281
BciT130I CCWGG 2 cut(s) 62, 686
BcnI CCSGG 1 cut(s) 2007
BcoDI GTCTC 1 cut(s) 238
BfaI CTAG 6 cut(s) 134, 464, 1043, 1187, 1835, 2157
BfmI CTRYAG 4 cut(s) 576, 887, 1232, 1533
BfuAI ACCTGC 1 cut(s) 2365
BglII AGATCT 2 cut(s) 1189, 1782
BisI GCNGC 6 cut(s) 517, 890, 1376, 1630, 1877, 2142
BlpI GCTNAGC 2 cut(s) 443, 2166
BlsI GCNGC 6 cut(s) 518, 891, 1377, 1631, 1878, 2143
Bme1390I CCNGG 3 cut(s) 62, 686, 2007
Bme18I GGWCC 2 cut(s) 1693, 2548
BmgT120I GGNCC 2 cut(s) 1693, 2548
BmiI GGNNCC 6 cut(s) 118, 709, 785, 1130, 1293, 2128
BmrFI CCNGG 3 cut(s) 62, 686, 2007
BmsI GCATC 6 cut(s) 57, 364, 519, 1451, 2298, 2566
BpiI GAAGAC 1 cut(s) 1169
BplI GAGNNNNNCTC 2 cut(s) 1495, 1527
BpmI CTGGAG 6 cut(s) 399, 419, 545, 1301, 1783, 2130
Bpu10I CCTNAGC 1 cut(s) 1607
Bpu1102I GCTNAGC 2 cut(s) 443, 2166
Bpu14I TTCGAA 1 cut(s) 1312
BpuMI CCSGG 1 cut(s) 2007
BsaJI CCNNGG 5 cut(s) 60, 61, 613, 684, 2522
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 869, 1561, 2618
Bse1I ACTGG 4 cut(s) 436, 1000, 1597, 2590
Bse21I CCTNAGG 1 cut(s) 796
Bse3DI GCAATG 1 cut(s) 1750
BseBI CCWGG 2 cut(s) 62, 686
BseDI CCNNGG 5 cut(s) 60, 61, 613, 684, 2522
BseGI GGATG 4 cut(s) 48, 500, 1342, 1466
BseLI CCNNNNNNNGG 4 cut(s) 62, 869, 1561, 2618
BseMI GCAATG 1 cut(s) 1750
BseMII CTCAG 9 cut(s) 134, 264, 336, 371, 457, 1091, 1598, 1742, 2157
BseNI ACTGG 4 cut(s) 436, 1000, 1597, 2590
BseRI GAGGAG 4 cut(s) 1516, 1883, 2080, 2558
BseXI GCAGC 5 cut(s) 528, 901, 1387, 1863, 2128
BseYI CCCAGC 1 cut(s) 334
BsgI GTGCAG 1 cut(s) 1862
BshFI GGCC 4 cut(s) 138, 327, 2291, 2611
BshNI GGYRCC 3 cut(s) 116, 707, 1291
BsiHKAI GWGCWC 2 cut(s) 2208, 2356
BsiSI CCGG 2 cut(s) 1762, 2006
BslFI GGGAC 2 cut(s) 1374, 1385
BslI CCNNNNNNNGG 4 cut(s) 62, 869, 1561, 2618
BsmAI GTCTC 1 cut(s) 238
BsmBI CGTCTC 1 cut(s) 238
BsmFI GGGAC 2 cut(s) 1374, 1385
BsmI GAATGC 3 cut(s) 855, 999, 1745
BsnI GGCC 4 cut(s) 138, 327, 2291, 2611
Bsp119I TTCGAA 1 cut(s) 1312
Bsp1286I GDGCHC 2 cut(s) 2208, 2356
Bsp143I GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
Bsp1720I GCTNAGC 2 cut(s) 443, 2166
BspACI CCGC 4 cut(s) 408, 632, 1596, 1629
BspANI GGCC 4 cut(s) 138, 327, 2291, 2611
BspCNI CTCAG 9 cut(s) 135, 265, 335, 370, 456, 1092, 1599, 1743, 2158
BspHI TCATGA 1 cut(s) 1963
BspLI GGNNCC 6 cut(s) 118, 709, 785, 1130, 1293, 2128
BspMAI CTGCAG 1 cut(s) 891
BspMI ACCTGC 1 cut(s) 2365
BspPI GGATC 4 cut(s) 187, 778, 791, 1630
BspT104I TTCGAA 1 cut(s) 1312
BspT107I GGYRCC 3 cut(s) 116, 707, 1291
BsrDI GCAATG 1 cut(s) 1750
BsrI ACTGG 4 cut(s) 436, 1000, 1597, 2590
BssECI CCNNGG 5 cut(s) 60, 61, 613, 684, 2522
BssMI GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
BssNAI GTATAC 1 cut(s) 1645
BssSI CACGAG 2 cut(s) 2040, 2207
BssT1I CCWWGG 2 cut(s) 613, 2522
Bst1107I GTATAC 1 cut(s) 1645
Bst2BI CACGAG 2 cut(s) 2040, 2207
Bst2UI CCWGG 2 cut(s) 62, 686
Bst4CI ACNGT 3 cut(s) 121, 1537, 2113
Bst6I CTCTTC 3 cut(s) 2334, 2340, 2611
BstBI TTCGAA 1 cut(s) 1312
BstC8I GCNNGC 1 cut(s) 2506
BstENI CCTNNNNNAGG 1 cut(s) 1559
BstF5I GGATG 4 cut(s) 48, 500, 1342, 1466
BstKTI GATC 7 cut(s) 195, 786, 1068, 1192, 1254, 1625, 1785
BstMAI GTCTC 1 cut(s) 238
BstMBI GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
BstMWI GCNNNNNNNGC 5 cut(s) 988, 1101, 1635, 2162, 2212
BstNI CCWGG 2 cut(s) 62, 686
BstNSI RCATGY 3 cut(s) 1389, 1794, 2508
BstSCI CCNGG 3 cut(s) 60, 684, 2005
BstSFI CTRYAG 4 cut(s) 576, 887, 1232, 1533
BstV1I GCAGC 5 cut(s) 528, 901, 1387, 1863, 2128
BstV2I GAAGAC 1 cut(s) 1169
BstX2I RGATCY 3 cut(s) 783, 1189, 1782
BstYI RGATCY 3 cut(s) 783, 1189, 1782
BstZ17I GTATAC 1 cut(s) 1645
Bsu36I CCTNAGG 1 cut(s) 796
BsuRI GGCC 4 cut(s) 138, 327, 2291, 2611
BtsCI GGATG 4 cut(s) 48, 500, 1342, 1466
BtsI GCAGTG 1 cut(s) 1990
BtsIMutI CAGTG 6 cut(s) 443, 1542, 1748, 1990, 2395, 2583
BveI ACCTGC 1 cut(s) 2365
Cac8I GCNNGC 1 cut(s) 2506
CciI TCATGA 1 cut(s) 1963
Cfr13I GGNCC 2 cut(s) 1693, 2548
CseI GACGC 1 cut(s) 842
Csp6I GTAC 3 cut(s) 117, 708, 1292
CspCI CAANNNNNGTGG 2 cut(s) 1336, 1371
CviAII CATG 7 cut(s) 1386, 1421, 1791, 1964, 1999, 2032, 2505
CviQI GTAC 3 cut(s) 117, 708, 1292
DpnI GATC 7 cut(s) 194, 785, 1067, 1191, 1253, 1624, 1784
DpnII GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
DraI TTTAAA 1 cut(s) 2254
EaeI YGGCCR 1 cut(s) 2289
Eam1104I CTCTTC 3 cut(s) 2334, 2340, 2611
EarI CTCTTC 3 cut(s) 2334, 2340, 2611
EciI GGCGGA 1 cut(s) 1611
Eco130I CCWWGG 2 cut(s) 613, 2522
Eco47I GGWCC 2 cut(s) 1693, 2548
Eco57I CTGAAG 4 cut(s) 347, 1046, 1163, 2474
Eco81I CCTNAGG 1 cut(s) 796
EcoNI CCTNNNNNAGG 1 cut(s) 1559
EcoO109I RGGNCCY 1 cut(s) 1693
EcoRI GAATTC 2 cut(s) 317, 1074
EcoRII CCWGG 2 cut(s) 60, 684
EcoT14I CCWWGG 2 cut(s) 613, 2522
ErhI CCWWGG 2 cut(s) 613, 2522
Esp3I CGTCTC 1 cut(s) 238
FaeI CATG 7 cut(s) 1389, 1424, 1794, 1967, 2002, 2035, 2508
FalI AAGNNNNNCTT 2 cut(s) 1715, 1747
FaqI GGGAC 2 cut(s) 1374, 1385
FatI CATG 7 cut(s) 1385, 1420, 1790, 1963, 1998, 2031, 2504
FauI CCCGC 2 cut(s) 415, 625
FblI GTMKAC 2 cut(s) 1644, 2319
Fnu4HI GCNGC 6 cut(s) 517, 890, 1376, 1630, 1877, 2142
FokI GGATG 4 cut(s) 35, 487, 1349, 1473
Fsp4HI GCNGC 6 cut(s) 517, 890, 1376, 1630, 1877, 2142
FspBI CTAG 6 cut(s) 134, 464, 1043, 1187, 1835, 2157
GluI GCNGC 6 cut(s) 517, 890, 1376, 1630, 1877, 2142
GsaI CCCAGC 1 cut(s) 338
GsuI CTGGAG 6 cut(s) 399, 419, 545, 1301, 1783, 2130
HaeIII GGCC 4 cut(s) 138, 327, 2291, 2611
HapII CCGG 2 cut(s) 1762, 2006
HgaI GACGC 1 cut(s) 842
Hin1II CATG 7 cut(s) 1389, 1424, 1794, 1967, 2002, 2035, 2508
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HindIII AAGCTT 2 cut(s) 148, 914
HinfI GANTC 8 cut(s) 601, 640, 1143, 1599, 1771, 2067, 2087, 2516
HpaII CCGG 2 cut(s) 1762, 2006
HphI GGTGA 5 cut(s) 320, 799, 1298, 2060, 2511
Hpy166II GTNNAC 9 cut(s) 457, 702, 1440, 1645, 1976, 2223, 2320, 2380, 2551
Hpy188I TCNGA 9 cut(s) 39, 366, 783, 907, 1054, 1070, 1101, 2493, 2512
Hpy8I GTNNAC 9 cut(s) 457, 702, 1440, 1645, 1976, 2223, 2320, 2380, 2551
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 9 cut(s) 66, 103, 206, 842, 967, 1161, 1712, 1919, 2498
HpyCH4III ACNGT 3 cut(s) 121, 1537, 2113
HpyCH4IV ACGT 1 cut(s) 228
HpyF10VI GCNNNNNNNGC 5 cut(s) 988, 1101, 1635, 2162, 2212
HpySE526I ACGT 1 cut(s) 228
Hsp92II CATG 7 cut(s) 1389, 1424, 1794, 1967, 2002, 2035, 2508
KpnI GGTACC 3 cut(s) 120, 711, 1295
Kzo9I GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
LmnI GCTCC 3 cut(s) 1715, 1802, 2149
Lsp1109I GCAGC 5 cut(s) 528, 901, 1387, 1863, 2128
LweI GCATC 6 cut(s) 57, 364, 519, 1451, 2298, 2566
MaeI CTAG 6 cut(s) 134, 464, 1043, 1187, 1835, 2157
MaeII ACGT 1 cut(s) 228
MaeIII GTNAC 6 cut(s) 308, 732, 750, 872, 2273, 2393
MalI GATC 7 cut(s) 194, 785, 1067, 1191, 1253, 1624, 1784
MboI GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
MfeI CAATTG 1 cut(s) 165
MflI RGATCY 3 cut(s) 783, 1189, 1782
MhlI GDGCHC 2 cut(s) 2208, 2356
MlsI TGGCCA 1 cut(s) 2291
MluNI TGGCCA 1 cut(s) 2291
MlyI GAGTC 3 cut(s) 595, 2061, 2081
MmeI TCCRAC 3 cut(s) 761, 2095, 2507
Mox20I TGGCCA 1 cut(s) 2291
MroXI GAANNNNTTC 2 cut(s) 70, 472
MscI TGGCCA 1 cut(s) 2291
MseI TTAA 8 cut(s) 210, 246, 255, 546, 671, 1787, 2253, 2444
Msp20I TGGCCA 1 cut(s) 2291
MspI CCGG 2 cut(s) 1762, 2006
MspR9I CCNGG 3 cut(s) 62, 686, 2007
MunI CAATTG 1 cut(s) 165
Mva1269I GAATGC 3 cut(s) 855, 999, 1745
MvaI CCWGG 2 cut(s) 62, 686
MwoI GCNNNNNNNGC 5 cut(s) 988, 1101, 1635, 2162, 2212
NciI CCSGG 1 cut(s) 2007
NdeII GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
NlaIII CATG 7 cut(s) 1389, 1424, 1794, 1967, 2002, 2035, 2508
NlaIV GGNNCC 6 cut(s) 118, 709, 785, 1130, 1293, 2128
NmuCI GTSAC 1 cut(s) 308
NspI RCATGY 3 cut(s) 1389, 1794, 2508
NspV TTCGAA 1 cut(s) 1312
PaeI GCATGC 1 cut(s) 2508
PagI TCATGA 1 cut(s) 1963
PaqCI CACCTGC 1 cut(s) 2365
PasI CCCWGGG 1 cut(s) 61
PciI ACATGT 2 cut(s) 1385, 1790
PctI GAATGC 3 cut(s) 855, 999, 1745
PdmI GAANNNNTTC 2 cut(s) 70, 472
PfeI GAWTC 5 cut(s) 640, 1143, 1599, 1771, 2516
PflMI CCANNNNNTGG 1 cut(s) 869
PkrI GCNGC 6 cut(s) 518, 891, 1377, 1631, 1878, 2143
PleI GAGTC 3 cut(s) 595, 2061, 2081
PpsI GAGTC 3 cut(s) 595, 2061, 2081
PpuMI RGGWCCY 1 cut(s) 1693
PscI ACATGT 2 cut(s) 1385, 1790
PshBI ATTAAT 1 cut(s) 246
PsiI TTATAA 1 cut(s) 497
Psp5II RGGWCCY 1 cut(s) 1693
Psp6I CCWGG 2 cut(s) 60, 684
PspFI CCCAGC 1 cut(s) 334
PspGI CCWGG 2 cut(s) 60, 684
PspN4I GGNNCC 6 cut(s) 118, 709, 785, 1130, 1293, 2128
PspPI GGNCC 2 cut(s) 1693, 2548
PspPPI RGGWCCY 1 cut(s) 1693
PstI CTGCAG 1 cut(s) 891
PsuI RGATCY 3 cut(s) 783, 1189, 1782
RsaI GTAC 3 cut(s) 118, 709, 1293
RsaNI GTAC 3 cut(s) 117, 708, 1292
SaqAI TTAA 8 cut(s) 210, 246, 255, 546, 671, 1787, 2253, 2444
SatI GCNGC 6 cut(s) 517, 890, 1376, 1630, 1877, 2142
Sau3AI GATC 7 cut(s) 192, 783, 1065, 1189, 1251, 1622, 1782
Sau96I GGNCC 2 cut(s) 1693, 2548
SchI GAGTC 3 cut(s) 595, 2061, 2081
ScrFI CCNGG 3 cut(s) 62, 686, 2007
SduI GDGCHC 2 cut(s) 2208, 2356
SfaNI GCATC 6 cut(s) 57, 364, 519, 1451, 2298, 2566
SfcI CTRYAG 4 cut(s) 576, 887, 1232, 1533
SfuI TTCGAA 1 cut(s) 1312
SinI GGWCC 2 cut(s) 1693, 2548
SphI GCATGC 1 cut(s) 2508
SsiI CCGC 4 cut(s) 408, 632, 1596, 1629
SspI AATATT 3 cut(s) 265, 868, 1927
SspMI CTAG 6 cut(s) 134, 464, 1043, 1187, 1835, 2157
StyD4I CCNGG 3 cut(s) 60, 684, 2005
StyI CCWWGG 2 cut(s) 613, 2522
TaaI ACNGT 3 cut(s) 121, 1537, 2113
TaiI ACGT 1 cut(s) 231
TaqI TCGA 5 cut(s) 450, 1011, 1312, 2241, 2409
TauI GCSGC 1 cut(s) 1632
TfiI GAWTC 5 cut(s) 640, 1143, 1599, 1771, 2516
Tru1I TTAA 8 cut(s) 210, 246, 255, 546, 671, 1787, 2253, 2444
Tru9I TTAA 8 cut(s) 210, 246, 255, 546, 671, 1787, 2253, 2444
TscAI CASTG 6 cut(s) 443, 1542, 1755, 1997, 2395, 2590
TseFI GTSAC 1 cut(s) 308
TseI GCWGC 5 cut(s) 516, 889, 1375, 1876, 2141
Tsp45I GTSAC 1 cut(s) 308
TspGWI ACGGA 1 cut(s) 2261
TspRI CASTG 6 cut(s) 443, 1542, 1755, 1997, 2395, 2590
Van91I CCANNNNNTGG 1 cut(s) 869
VpaK11BI GGWCC 2 cut(s) 1693, 2548
VspI ATTAAT 1 cut(s) 246
XagI CCTNNNNNAGG 1 cut(s) 1559
XapI RAATTY 8 cut(s) 251, 317, 402, 421, 491, 1074, 1109, 2440
XbaI TCTAGA 1 cut(s) 1186
XceI RCATGY 3 cut(s) 1389, 1794, 2508
XmiI GTMKAC 2 cut(s) 1644, 2319
XmnI GAANNNNTTC 2 cut(s) 70, 472
XspI CTAG 6 cut(s) 134, 464, 1043, 1187, 1835, 2157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.