Rmu_co7968444.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7968444.1
Physical Location & Seq
Reverse (-)
2 .. 375
374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7968444.1_g000001.1.cds

Sequence Viewer

Length: 374 bp
atgcttgatatgagtttcaacgattttagaggtgttttaccccactctgtagtcaacttgtcaactcaactggctgtattctactttggacacaatcagatatcaggagtgatccctgaaacattagaaaatctcaacaatttaatagccttgagcctggatgataacctgttcagaggcgccattcctacctctattggcaaattacaaaacctgcaaggattgggtttaagaggtaatagattatcaggatggatcccatcttccataggaaacctcactcaattgtattacctcgacttgtcaggaaatgacttggaaggaaacattcctccaagtattggaaactgccaacatttgcaggagatgtatac

Protein Analysis

125

Amino Acids

13.73

Weight (kDa)

4.8

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 222
AccB1I GGYRCC 1 cut(s) 179
AccB7I CCANNNNNTGG 1 cut(s) 341
AccI GTMKAC 1 cut(s) 371
AclWI GGATC 3 cut(s) 106, 250, 263
AcyI GRCGYC 1 cut(s) 180
AfiI CCNNNNNNNGG 1 cut(s) 341
AgsI TTSAA 1 cut(s) 19
AjnI CCWGG 1 cut(s) 156
AlwI GGATC 3 cut(s) 106, 250, 263
AspLEI GCGC 1 cut(s) 182
BamHI GGATCC 1 cut(s) 255
BanI GGYRCC 1 cut(s) 179
BccI CCATC 2 cut(s) 246, 268
BciT130I CCWGG 1 cut(s) 158
BfmI CTRYAG 1 cut(s) 48
BfoI RGCGCY 1 cut(s) 183
BfuAI ACCTGC 1 cut(s) 222
Bme1390I CCNGG 1 cut(s) 158
BmiI GGNNCC 2 cut(s) 181, 257
BmrFI CCNGG 1 cut(s) 158
BpuEI CTTGAG 1 cut(s) 172
BsaHI GRCGYC 1 cut(s) 180
Bsc4I CCNNNNNNNGG 1 cut(s) 341
Bse1I ACTGG 1 cut(s) 75
BseBI CCWGG 1 cut(s) 158
BseGI GGATG 2 cut(s) 166, 257
BseLI CCNNNNNNNGG 1 cut(s) 341
BseNI ACTGG 1 cut(s) 75
BshNI GGYRCC 1 cut(s) 179
BslI CCNNNNNNNGG 1 cut(s) 341
Bsp143I GATC 2 cut(s) 111, 255
BspLI GGNNCC 2 cut(s) 181, 257
BspMI ACCTGC 1 cut(s) 222
BspPI GGATC 3 cut(s) 106, 250, 263
BspT107I GGYRCC 1 cut(s) 179
BsrI ACTGG 1 cut(s) 75
BssMI GATC 2 cut(s) 111, 255
BssNAI GTATAC 1 cut(s) 372
BssNI GRCGYC 1 cut(s) 180
Bst1107I GTATAC 1 cut(s) 372
Bst2UI CCWGG 1 cut(s) 158
BstACI GRCGYC 1 cut(s) 180
BstF5I GGATG 2 cut(s) 166, 257
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 1 cut(s) 182
BstKTI GATC 2 cut(s) 114, 258
BstMBI GATC 2 cut(s) 111, 255
BstNI CCWGG 1 cut(s) 158
BstSCI CCNGG 1 cut(s) 156
BstSFI CTRYAG 1 cut(s) 48
BstX2I RGATCY 1 cut(s) 255
BstYI RGATCY 1 cut(s) 255
BstZ17I GTATAC 1 cut(s) 372
BtsCI GGATG 2 cut(s) 166, 257
BveI ACCTGC 1 cut(s) 222
CfoI GCGC 1 cut(s) 182
CviJI RGCY 3 cut(s) 74, 149, 156
CviKI_1 RGCY 3 cut(s) 74, 149, 156
DinI GGCGCC 1 cut(s) 181
DpnI GATC 2 cut(s) 113, 257
DpnII GATC 2 cut(s) 111, 255
Eco32I GATATC 1 cut(s) 102
EcoRII CCWGG 1 cut(s) 156
EcoRV GATATC 1 cut(s) 102
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
FaiI YATR 3 cut(s) 11, 269, 372
FblI GTMKAC 1 cut(s) 371
FokI GGATG 2 cut(s) 173, 264
GlaI GCGC 1 cut(s) 181
HaeII RGCGCY 1 cut(s) 183
HhaI GCGC 1 cut(s) 182
Hin1I GRCGYC 1 cut(s) 180
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HincII GTYRAC 2 cut(s) 55, 63
HindII GTYRAC 2 cut(s) 55, 63
Hpy166II GTNNAC 3 cut(s) 55, 63, 372
Hpy188I TCNGA 2 cut(s) 99, 176
Hpy188III TCNNGA 3 cut(s) 105, 249, 306
Hpy8I GTNNAC 3 cut(s) 55, 63, 372
HpyAV CCTTC 1 cut(s) 314
HpyCH4V TGCA 2 cut(s) 217, 361
Hsp92I GRCGYC 1 cut(s) 180
HspAI GCGC 1 cut(s) 180
KasI GGCGCC 1 cut(s) 179
Kzo9I GATC 2 cut(s) 111, 255
MalI GATC 2 cut(s) 113, 257
MboI GATC 2 cut(s) 111, 255
MboII GAAGA 1 cut(s) 255
MfeI CAATTG 1 cut(s) 284
MflI RGATCY 1 cut(s) 255
MluCI AATT 3 cut(s) 139, 203, 284
Mly113I GGCGCC 1 cut(s) 180
MnlI CCTC 7 cut(s) 23, 170, 202, 227, 287, 305, 342
MseI TTAA 2 cut(s) 143, 230
MspR9I CCNGG 1 cut(s) 158
MunI CAATTG 1 cut(s) 284
MvaI CCWGG 1 cut(s) 158
NarI GGCGCC 1 cut(s) 180
NdeII GATC 2 cut(s) 111, 255
NlaIV GGNNCC 2 cut(s) 181, 257
PflMI CCANNNNNTGG 1 cut(s) 341
PluTI GGCGCC 1 cut(s) 183
Psp6I CCWGG 1 cut(s) 156
PspGI CCWGG 1 cut(s) 156
PspN4I GGNNCC 2 cut(s) 181, 257
PsuI RGATCY 1 cut(s) 255
SaqAI TTAA 2 cut(s) 143, 230
Sau3AI GATC 2 cut(s) 111, 255
ScrFI CCNGG 1 cut(s) 158
SetI ASST 7 cut(s) 34, 171, 194, 216, 238, 279, 297
SfcI CTRYAG 1 cut(s) 48
SfoI GGCGCC 1 cut(s) 181
SmlI CTYRAG 1 cut(s) 151
SmoI CTYRAG 1 cut(s) 151
Sse9I AATT 3 cut(s) 139, 203, 284
SspDI GGCGCC 1 cut(s) 179
StyD4I CCNGG 1 cut(s) 156
TaqI TCGA 1 cut(s) 297
TasI AATT 3 cut(s) 139, 203, 284
Tru1I TTAA 2 cut(s) 143, 230
Tru9I TTAA 2 cut(s) 143, 230
Van91I CCANNNNNTGG 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.