RLG00000028769
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
27697619 .. 27701248
3630 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028769

Sequence Viewer

Length: 3132 bp
ATGAAGAGTTTCACATACCATCAAGTCCTGACCCTTCTCCTTTTCATCAACTTTTTACAACCTACCACTGTTGTAAATTCATTTGGCAATGAAACCGATCGCTTGGCTTTGCTAAAATTCAAAGATTGCATAGCCTCTGATCCACATGGGCTGTTGAACTCATGGAATGACTCCGTTCATTACTGCAAATGGCCTGGAATTACTTGTGGCAGACGACATCAAAGAGTAACAACCTTGAACCTACCACACGCTATTTTGCACGGAACCATATCTCCTTACATTGGAAACCTCTCATTTCTTAGGTTCATCAACCTACGAAACAACAGCTTCTCTGGCAACATTCCGCAACAAGTTGAAAATTTATTCCGACTCCAACATCTCAATCTCAGTATCAACATGTTGGAGGGGGAAATTCCAGTCAACCTGACCTTCTCCCGCCAATTAAGCATCATAACCATTGCATGGAACCGCCTTACCGGGAAAATTCCTTCAGAGATTGGTTCATTGAAGCTTGTGTGTCTTGATCTTCAGATTAACAATCTGACAGGAGGCATACCACCTTCCTTGGGAAATCTTTCATTAATCACTTTTCTTTCCTTACAAGAGAACAATTTGATTGGCAGCGTACCTGAGGAAATAGGCCGATTGAGAAGCTTATCATTTTTTTCAGTTGGTCCCAATAATCTCTCGGGTACGATACCTCCCTCTTTTTTTAACATATCATCTATGAACCGCTTCTCACTTGCAGCTAATAAATTTAAGGGCAGTATTCCACCTGGTATAGGTCTAAGCATGCCTAATCTCCAAGAAGTGTACCTTGGTGCAAATGAATTCTCTGGCCAAATCCCAGCTTCATTTTCCAATGCTTCTCAGCTTCAGATACTTGATGTTGGGGACAATAATTTTGTTGGGCAAGTTCCCGCAAGTTTTGGAAATTTTCCCAATCTCCAGCTGCTGAACTTTGAGGTCAATAATCTAGGAACTAATTCATCAAATGATTTGGGATTTATAAGATTCTTGACAAATTGCAGCAATTTATGGTTGTTTTCTCTTAGTAATAACAATTTTGGAGGTGTTTTACCCAATTCTGTAGCCAATTTCTCAACCCAACTAACTCAACTCTGCCTTGGGGCCAATCAAATAGCAGGAACGATTCCTGAAACATTAGAAAATCTCAGCAATTTAATACTCCTGACCCTGGAAGAAAACTTGTTCACAGGTACCATTCCAGCTTCTTTTGGGAAGTTACGAAAGCTGCAAGTATTAAGTTTAGATTCCAATAGATTATCAGGCCAGATCCCATCTTCCTTAGGAAACCTCACCCAATTATATCACCTTCACTTATTACAAAATGAATTAGAAGGAAGCATTCCTCCAAATATTGGTAACTGCAAAAATCTGCAACAGTTGGATATATCAGACAATAAGCTTAGTGGAGATATACCATCACAGGTGATTGGTCTGTCCTTCTCTGTCTTGCTCAACTTGTCGCAAAACTCGCTGACTGGCATTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTGGACATCTCTGATAATAATTTGACCGGAGGAATTCCAGAAATTATTGGAGGCTGTTTGAATCTAGAATTTCTTTACCTACAAGGGAACCACTTTCAAGGAATCGTACCTTCTTCTTTGGCTGCATTGAGAGGTCTTCAATATCTAGATCTTTCACGAAACAACTTGTCAGGACATATTCCAAAAGACCTACAGAGGCTTCCATTCTTGATCCATTTGAACCTTTCGTTCAATAATCTGGAGGGTGAGGTACCGAAAGAAAGAGTTTTTCAAAACATAAGTGCAATATCATTGGATGGAAATACCAAACTTTGTGGAGGTATTTCAGAATTGCAGCTACCAGCATGCCCCATCAAAGTACCAAAGCAGAGAAAGTTGCATGCTTTCAAACTAAAGTTCACAATTTCCTTGGTCGCTGGATGCTCTCTTTTGTTTGCAGTCGTCTCAGCTCTTTATTGGAGGAGAAAAACTCAAAAGAGGAAGCCATTAATAGCAGTGTCATCAATTAACTTCCTTCCAAAGGTTTCATACCAGACACTTCATCATGCTACTGGCGGATTCTCTCCGAGCAATCAAATTGGATCCGGCGGTTTTGGCTCTGTATACAAAGGGATTTTTAATCAAGAAGAAAACAACGTTGTTGCCATCAAGGTCCTCAACCTTCAACGGAAAGGTGCTTCCAAGAGTTTTGTGGCTGAATGCAATGCACTGAGAAATATCCGGCACAGGAATCTTGTGAAGATCTTAACATGTTGCTCCAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTATATGTCAAATGGAAATTTAGAGGAGTGGCTGCACAAAGAAAATCAATCAAGGAGTTTGAACCTTTTTCAAAGATTGAATATTGCTATTGATGTGGCTTCTGCATTGTGTTATCTTCATGACTATTGTGAACCACAAATCATTCACTGCGACATGAAGCCGAGCAACATTCTTCTTGATGATGACATGGTTGCTCGTGTTGGTGATTTTGGGTTAGCAAGACTCATCTCAACAACCACAGACTCCTTTCAAAATCAAAGTAGCACAGTTAGAATAAAGGGAACCATTGGCTATACTGCTCCAGAGTATGCGTGTGGTGTTGAGCCATCAAGAGAAGGAGATGTATATAGTTATGGGGTGTTCGTGTTGCAAATGTTCACAGGAAGAAGACCTATCGACGATATGTTTAAAGATGGTTTGAACCTCCATAACTTTGTTAAGATGGCCATACCAGAAACAGTGATGCAGATTGTAGATCCTACTCTCCTTGCCACTTTAGAAGGGACAACACCTGCAACATCACAAAATGTAGTGAACTACATCAATGGTTACAATAATGAAATCAAAGCAGTTGAAGAAAACATTAACAATGAGAATTTAAGCAAGATGAACAATGTGTGGGAGTGCATAATTCCAACCCTTAAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGAATGTCTATGGAGGAGGTCCACAGGAAGCTACACCATATAAAAGATGCTTACACTAGTGTTGACATCTGTCAAGAAAGGCCAAGAAGAAGCTGA

Protein Analysis

1044

Amino Acids

115.3

Weight (kDa)

7.77

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 5.2e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 266 - 326 7.9e-06 Leucine rich repeat
LRR_8 PF13855 370 - 429 1.7e-08 Leucine rich repeat
LRR_14 PF23598 376 - 450 6.8e-06 Leucine-rich repeat region
LRR_14 PF23598 495 - 601 1.4e-07 Leucine-rich repeat region
LRR_8 PF13855 538 - 597 2.7e-09 Leucine rich repeat
Pkinase PF00069 707 - 932 1.9e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 708 - 922 2.9e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1010
AarI CACCTGC 1 cut(s) 2875
Acc36I ACCTGC 1 cut(s) 2875
Acc65I GGTACC 2 cut(s) 1220, 1801
AccB1I GGYRCC 2 cut(s) 1220, 1801
AccB7I CCANNNNNTGG 2 cut(s) 462, 1382
AccI GTMKAC 1 cut(s) 2154
AciI CCGC 7 cut(s) 344, 436, 469, 733, 921, 2106, 2139
AclI AACGTT 1 cut(s) 2187
AclWI GGATC 6 cut(s) 134, 1291, 1756, 2127, 2140, 2825
AcoI YGGCCR 2 cut(s) 838, 2799
AcuI CTGAAG 4 cut(s) 474, 512, 860, 1556
AfaI GTAC 7 cut(s) 627, 694, 815, 1222, 1659, 1803, 1911
AfiI CCNNNNNNNGG 7 cut(s) 281, 462, 566, 782, 1198, 1382, 2071
AflII CTTAAG 1 cut(s) 2996
AflIII ACRYGT 2 cut(s) 396, 2300
AhlI ACTAGT 1 cut(s) 3092
AjnI CCWGG 3 cut(s) 193, 775, 1197
AjuI GAANNNNNNNTTGG 2 cut(s) 801, 833
AloI GAACNNNNNNTCC 2 cut(s) 256, 288
Alw26I GTCTC 1 cut(s) 1999
AlwI GGATC 6 cut(s) 134, 1291, 1756, 2127, 2140, 2825
AlwNI CAGNNNCTG 1 cut(s) 955
Ama87I CYCGRG 1 cut(s) 688
AoxI GGCC 7 cut(s) 191, 640, 838, 1131, 1291, 2799, 3116
ApeKI GCWGC 8 cut(s) 621, 746, 952, 1029, 1255, 1673, 1885, 2386
ArsI GACNNNNNNTTYG 2 cut(s) 887, 919
AseI ATTAAT 2 cut(s) 581, 2039
Asp700I GAANNNNTTC 4 cut(s) 8, 574, 734, 985
Asp718I GGTACC 2 cut(s) 1220, 1801
AspS9I GGNCC 4 cut(s) 674, 1131, 2203, 3055
AsuC2I CCSGG 1 cut(s) 478
AsuHPI GGTGA 6 cut(s) 1312, 1325, 1465, 1808, 2570, 3018
AvaI CYCGRG 1 cut(s) 688
AvaII GGWCC 3 cut(s) 674, 2203, 3055
AxyI CCTNAGG 2 cut(s) 630, 1309
BalI TGGCCA 2 cut(s) 840, 2801
BamHI GGATCC 1 cut(s) 2132
BanI GGYRCC 2 cut(s) 1220, 1801
BauI CACGAG 1 cut(s) 2550
BbsI GAAGAC 2 cut(s) 1679, 2749
BbvI GCAGC 8 cut(s) 633, 758, 939, 1041, 1242, 1660, 1897, 2373
BccI CCATC 9 cut(s) 27, 1309, 1453, 1841, 1910, 2204, 2689, 2762, 2791
BciT130I CCWGG 3 cut(s) 195, 777, 1199
BcnI CCSGG 1 cut(s) 478
BcoDI GTCTC 1 cut(s) 1999
BcuI ACTAGT 1 cut(s) 3092
BfaI CTAG 5 cut(s) 977, 1616, 1697, 2345, 3093
BfmI CTRYAG 2 cut(s) 1089, 1742
BfrI CTTAAG 1 cut(s) 2996
BfuAI ACCTGC 1 cut(s) 2875
BglII AGATCT 2 cut(s) 1699, 2292
BisI GCNGC 8 cut(s) 622, 747, 953, 1030, 1256, 1674, 1886, 2387
BlsI GCNGC 8 cut(s) 623, 748, 954, 1031, 1257, 1675, 1887, 2388
Bme1390I CCNGG 4 cut(s) 195, 478, 777, 1199
Bme18I GGWCC 3 cut(s) 674, 2203, 3055
BmeT110I CYCGRG 1 cut(s) 688
BmgT120I GGNCC 4 cut(s) 674, 1131, 2203, 3055
BmiI GGNNCC 9 cut(s) 265, 467, 676, 1132, 1222, 1640, 1803, 2134, 2638
BmrFI CCNGG 4 cut(s) 195, 478, 777, 1199
BmsI GCATC 4 cut(s) 456, 1961, 2808, 3073
BoxI GACNNNNGTC 1 cut(s) 3105
BpiI GAAGAC 2 cut(s) 1679, 2749
BplI GAGNNNNNCTC 2 cut(s) 2005, 2037
BpmI CTGGAG 4 cut(s) 932, 1811, 2293, 2640
BpuMI CCSGG 1 cut(s) 478
BsaJI CCNNGG 6 cut(s) 564, 817, 1126, 1197, 1959, 3029
BsaWI WCCGGW 1 cut(s) 1577
BsaXI ACNNNNNCTCC 4 cut(s) 256, 286, 685, 715
Bsc4I CCNNNNNNNGG 7 cut(s) 281, 462, 566, 782, 1198, 1382, 2071
Bse1I ACTGG 4 cut(s) 416, 1510, 1557, 2107
Bse21I CCTNAGG 2 cut(s) 630, 1309
Bse3DI GCAATG 3 cut(s) 94, 456, 2260
BseBI CCWGG 3 cut(s) 195, 777, 1199
BseDI CCNNGG 6 cut(s) 564, 817, 1126, 1197, 1959, 3029
BseGI GGATG 2 cut(s) 1852, 1976
BseLI CCNNNNNNNGG 7 cut(s) 281, 462, 566, 782, 1198, 1382, 2071
BseMI GCAATG 3 cut(s) 94, 456, 2260
BseMII CTCAG 6 cut(s) 400, 621, 884, 1189, 2010, 2252
BseNI ACTGG 4 cut(s) 416, 1510, 1557, 2107
BseRI GAGGAG 3 cut(s) 2026, 2393, 3065
BseXI GCAGC 8 cut(s) 633, 758, 939, 1041, 1242, 1660, 1897, 2373
BseYI CCCAGC 1 cut(s) 847
BsgI GTGCAG 1 cut(s) 2372
Bsh1285I CGRYCG 1 cut(s) 100
BshFI GGCC 7 cut(s) 193, 642, 840, 1133, 1293, 2801, 3118
BshNI GGYRCC 2 cut(s) 1220, 1801
BsiEI CGRYCG 1 cut(s) 100
BsiHKCI CYCGRG 1 cut(s) 688
BsiSI CCGG 4 cut(s) 477, 1578, 2136, 2272
BslFI GGGAC 3 cut(s) 660, 908, 2872
BslI CCNNNNNNNGG 7 cut(s) 281, 462, 566, 782, 1198, 1382, 2071
BsmAI GTCTC 1 cut(s) 1999
BsmBI CGTCTC 1 cut(s) 1999
BsmFI GGGAC 3 cut(s) 660, 908, 2872
BsmI GAATGC 3 cut(s) 1368, 1509, 2255
BsnI GGCC 7 cut(s) 193, 642, 840, 1133, 1293, 2801, 3118
BsoBI CYCGRG 1 cut(s) 688
Bsp143I GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
BspACI CCGC 7 cut(s) 344, 436, 469, 733, 921, 2106, 2139
BspANI GGCC 7 cut(s) 193, 642, 840, 1133, 1293, 2801, 3118
BspCNI CTCAG 6 cut(s) 399, 622, 883, 1188, 2009, 2253
BspHI TCATGA 1 cut(s) 2473
BspLI GGNNCC 9 cut(s) 265, 467, 676, 1132, 1222, 1640, 1803, 2134, 2638
BspMI ACCTGC 1 cut(s) 2875
BspPI GGATC 6 cut(s) 134, 1291, 1756, 2127, 2140, 2825
BspT107I GGYRCC 2 cut(s) 1220, 1801
BspTI CTTAAG 1 cut(s) 2996
BsrDI GCAATG 3 cut(s) 94, 456, 2260
BsrI ACTGG 4 cut(s) 416, 1510, 1557, 2107
BssECI CCNNGG 6 cut(s) 564, 817, 1126, 1197, 1959, 3029
BssMI GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
BssNAI GTATAC 1 cut(s) 2155
BssSI CACGAG 1 cut(s) 2550
BssT1I CCWWGG 5 cut(s) 564, 817, 1126, 1959, 3029
Bst1107I GTATAC 1 cut(s) 2155
Bst2BI CACGAG 1 cut(s) 2550
Bst2UI CCWGG 3 cut(s) 195, 777, 1199
Bst4CI ACNGT 4 cut(s) 70, 1407, 2623, 2815
BstAFI CTTAAG 1 cut(s) 2996
BstC8I GCNNGC 4 cut(s) 794, 1897, 1932, 3013
BstENI CCTNNNNNAGG 2 cut(s) 780, 2069
BstF5I GGATG 2 cut(s) 1852, 1976
BstKTI GATC 9 cut(s) 100, 142, 526, 1299, 1702, 1764, 2135, 2295, 2833
BstMAI GTCTC 1 cut(s) 1999
BstMBI GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
BstMCI CGRYCG 1 cut(s) 100
BstMWI GCNNNNNNNGC 4 cut(s) 333, 444, 1498, 2145
BstNI CCWGG 3 cut(s) 195, 777, 1199
BstNSI RCATGY 6 cut(s) 400, 796, 1899, 1934, 2304, 3015
BstPAI GACNNNNGTC 1 cut(s) 3105
BstSCI CCNGG 4 cut(s) 193, 476, 775, 1197
BstSFI CTRYAG 2 cut(s) 1089, 1742
BstV1I GCAGC 8 cut(s) 633, 758, 939, 1041, 1242, 1660, 1897, 2373
BstV2I GAAGAC 2 cut(s) 1679, 2749
BstX2I RGATCY 5 cut(s) 1296, 1699, 2132, 2292, 2830
BstYI RGATCY 5 cut(s) 1296, 1699, 2132, 2292, 2830
BstZ17I GTATAC 1 cut(s) 2155
Bsu36I CCTNAGG 2 cut(s) 630, 1309
BsuRI GGCC 7 cut(s) 193, 642, 840, 1133, 1293, 2801, 3118
BtsCI GGATG 2 cut(s) 1852, 1976
BtsI GCAGTG 2 cut(s) 2052, 2500
BtsIMutI CAGTG 6 cut(s) 66, 1550, 2052, 2258, 2500, 2820
BveI ACCTGC 1 cut(s) 2875
Cac8I GCNNGC 4 cut(s) 794, 1897, 1932, 3013
CaiI CAGNNNCTG 1 cut(s) 955
CciI TCATGA 1 cut(s) 2473
Cfr13I GGNCC 4 cut(s) 674, 1131, 2203, 3055
CsiI ACCWGGT 1 cut(s) 775
Csp6I GTAC 7 cut(s) 626, 693, 814, 1221, 1658, 1802, 1910
CspCI CAANNNNNGTGG 4 cut(s) 546, 581, 1846, 1881
CviQI GTAC 7 cut(s) 626, 693, 814, 1221, 1658, 1802, 1910
DpnI GATC 9 cut(s) 99, 141, 525, 1298, 1701, 1763, 2134, 2294, 2832
DpnII GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
DraI TTTAAA 1 cut(s) 2764
EaeI YGGCCR 2 cut(s) 838, 2799
EciI GGCGGA 1 cut(s) 2121
Eco130I CCWWGG 5 cut(s) 564, 817, 1126, 1959, 3029
Eco47I GGWCC 3 cut(s) 674, 2203, 3055
Eco57I CTGAAG 4 cut(s) 474, 512, 860, 1556
Eco81I CCTNAGG 2 cut(s) 630, 1309
Eco88I CYCGRG 1 cut(s) 688
EcoNI CCTNNNNNAGG 2 cut(s) 780, 2069
EcoO109I RGGNCCY 1 cut(s) 2203
EcoRI GAATTC 2 cut(s) 830, 1584
EcoRII CCWGG 3 cut(s) 193, 775, 1197
EcoT14I CCWWGG 5 cut(s) 564, 817, 1126, 1959, 3029
ErhI CCWWGG 5 cut(s) 564, 817, 1126, 1959, 3029
Esp3I CGTCTC 1 cut(s) 1999
FalI AAGNNNNNCTT 2 cut(s) 801, 833
FaqI GGGAC 3 cut(s) 660, 908, 2872
FauI CCCGC 2 cut(s) 443, 928
FblI GTMKAC 1 cut(s) 2154
Fnu4HI GCNGC 8 cut(s) 622, 747, 953, 1030, 1256, 1674, 1886, 2387
FokI GGATG 2 cut(s) 1859, 1983
Fsp4HI GCNGC 8 cut(s) 622, 747, 953, 1030, 1256, 1674, 1886, 2387
FspBI CTAG 5 cut(s) 977, 1616, 1697, 2345, 3093
GluI GCNGC 8 cut(s) 622, 747, 953, 1030, 1256, 1674, 1886, 2387
GsaI CCCAGC 1 cut(s) 851
GsuI CTGGAG 4 cut(s) 932, 1811, 2293, 2640
HaeIII GGCC 7 cut(s) 193, 642, 840, 1133, 1293, 2801, 3118
HapII CCGG 4 cut(s) 477, 1578, 2136, 2272
HincII GTYRAC 2 cut(s) 421, 3100
HindII GTYRAC 2 cut(s) 421, 3100
HindIII AAGCTT 3 cut(s) 509, 652, 1427
HpaII CCGG 4 cut(s) 477, 1578, 2136, 2272
HphI GGTGA 6 cut(s) 1312, 1325, 1465, 1808, 2570, 3018
Hpy99I CGWCG 1 cut(s) 2756
HpyCH4III ACNGT 4 cut(s) 70, 1407, 2623, 2815
HpyCH4IV ACGT 1 cut(s) 2187
HpyF10VI GCNNNNNNNGC 4 cut(s) 333, 444, 1498, 2145
HpySE526I ACGT 1 cut(s) 2187
KpnI GGTACC 2 cut(s) 1224, 1805
Kzo9I GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
LmnI GCTCC 2 cut(s) 2312, 2659
Lsp1109I GCAGC 8 cut(s) 633, 758, 939, 1041, 1242, 1660, 1897, 2373
LweI GCATC 4 cut(s) 456, 1961, 2808, 3073
MabI ACCWGGT 1 cut(s) 775
MaeI CTAG 5 cut(s) 977, 1616, 1697, 2345, 3093
MaeII ACGT 1 cut(s) 2187
MaeIII GTNAC 4 cut(s) 226, 1245, 1385, 2903
MalI GATC 9 cut(s) 99, 141, 525, 1298, 1701, 1763, 2134, 2294, 2832
MboI GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
MflI RGATCY 5 cut(s) 1296, 1699, 2132, 2292, 2830
MlsI TGGCCA 2 cut(s) 840, 2801
MluNI TGGCCA 2 cut(s) 840, 2801
MlyI GAGTC 4 cut(s) 164, 363, 2571, 2591
MmeI TCCRAC 5 cut(s) 381, 391, 397, 1389, 3014
Mox20I TGGCCA 2 cut(s) 840, 2801
MroXI GAANNNNTTC 4 cut(s) 8, 574, 734, 985
MscI TGGCCA 2 cut(s) 840, 2801
Msp20I TGGCCA 2 cut(s) 840, 2801
MspA1I CMGCKG 1 cut(s) 952
MspCI CTTAAG 1 cut(s) 2996
MspI CCGG 4 cut(s) 477, 1578, 2136, 2272
MspR9I CCNGG 4 cut(s) 195, 478, 777, 1199
Mva1269I GAATGC 3 cut(s) 1368, 1509, 2255
MvaI CCWGG 3 cut(s) 195, 777, 1199
MwoI GCNNNNNNNGC 4 cut(s) 333, 444, 1498, 2145
NciI CCSGG 1 cut(s) 478
NdeII GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
NlaIV GGNNCC 9 cut(s) 265, 467, 676, 1132, 1222, 1640, 1803, 2134, 2638
NmeAIII GCCGAG 1 cut(s) 2541
NspI RCATGY 6 cut(s) 400, 796, 1899, 1934, 2304, 3015
PaeI GCATGC 4 cut(s) 796, 1899, 1934, 3015
PagI TCATGA 1 cut(s) 2473
PaqCI CACCTGC 1 cut(s) 2875
PciI ACATGT 2 cut(s) 396, 2300
PctI GAATGC 3 cut(s) 1368, 1509, 2255
PdmI GAANNNNTTC 4 cut(s) 8, 574, 734, 985
PfeI GAWTC 8 cut(s) 1014, 1153, 1274, 1612, 1653, 2109, 2281, 3023
PflMI CCANNNNNTGG 2 cut(s) 462, 1382
PkrI GCNGC 8 cut(s) 623, 748, 954, 1031, 1257, 1675, 1887, 2388
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 4 cut(s) 164, 363, 2571, 2591
PpsI GAGTC 4 cut(s) 164, 363, 2571, 2591
PpuMI RGGWCCY 1 cut(s) 2203
PscI ACATGT 2 cut(s) 396, 2300
PshAI GACNNNNGTC 1 cut(s) 3105
PshBI ATTAAT 2 cut(s) 581, 2039
PsiI TTATAA 1 cut(s) 1010
Psp1406I AACGTT 1 cut(s) 2187
Psp5II RGGWCCY 1 cut(s) 2203
Psp6I CCWGG 3 cut(s) 193, 775, 1197
PspFI CCCAGC 1 cut(s) 847
PspGI CCWGG 3 cut(s) 193, 775, 1197
PspN4I GGNNCC 9 cut(s) 265, 467, 676, 1132, 1222, 1640, 1803, 2134, 2638
PspPI GGNCC 4 cut(s) 674, 1131, 2203, 3055
PspPPI RGGWCCY 1 cut(s) 2203
PstNI CAGNNNCTG 1 cut(s) 955
PsuI RGATCY 5 cut(s) 1296, 1699, 2132, 2292, 2830
PvuI CGATCG 1 cut(s) 100
PvuII CAGCTG 1 cut(s) 952
RsaI GTAC 7 cut(s) 627, 694, 815, 1222, 1659, 1803, 1911
RsaNI GTAC 7 cut(s) 626, 693, 814, 1221, 1658, 1802, 1910
SatI GCNGC 8 cut(s) 622, 747, 953, 1030, 1256, 1674, 1886, 2387
Sau3AI GATC 9 cut(s) 97, 139, 523, 1296, 1699, 1761, 2132, 2292, 2830
Sau96I GGNCC 4 cut(s) 674, 1131, 2203, 3055
SchI GAGTC 4 cut(s) 164, 363, 2571, 2591
ScrFI CCNGG 4 cut(s) 195, 478, 777, 1199
SexAI ACCWGGT 1 cut(s) 775
SfaNI GCATC 4 cut(s) 456, 1961, 2808, 3073
SfcI CTRYAG 2 cut(s) 1089, 1742
SinI GGWCC 3 cut(s) 674, 2203, 3055
SmlI CTYRAG 1 cut(s) 2996
SmoI CTYRAG 1 cut(s) 2996
SpeI ACTAGT 1 cut(s) 3092
SphI GCATGC 4 cut(s) 796, 1899, 1934, 3015
SsiI CCGC 7 cut(s) 344, 436, 469, 733, 921, 2106, 2139
SspI AATATT 2 cut(s) 1381, 2437
SspMI CTAG 5 cut(s) 977, 1616, 1697, 2345, 3093
StyD4I CCNGG 4 cut(s) 193, 476, 775, 1197
StyI CCWWGG 5 cut(s) 564, 817, 1126, 1959, 3029
TaaI ACNGT 4 cut(s) 70, 1407, 2623, 2815
TaiI ACGT 1 cut(s) 2190
TaqI TCGA 1 cut(s) 2751
TfiI GAWTC 8 cut(s) 1014, 1153, 1274, 1612, 1653, 2109, 2281, 3023
TscAI CASTG 6 cut(s) 73, 1557, 2052, 2265, 2507, 2820
TseI GCWGC 8 cut(s) 621, 746, 952, 1029, 1255, 1673, 1885, 2386
TspGWI ACGGA 3 cut(s) 163, 276, 2233
TspRI CASTG 6 cut(s) 73, 1557, 2052, 2265, 2507, 2820
Van91I CCANNNNNTGG 2 cut(s) 462, 1382
Vha464I CTTAAG 1 cut(s) 2996
VpaK11BI GGWCC 3 cut(s) 674, 2203, 3055
VspI ATTAAT 2 cut(s) 581, 2039
XagI CCTNNNNNAGG 2 cut(s) 780, 2069
XbaI TCTAGA 2 cut(s) 1615, 1696
XceI RCATGY 6 cut(s) 400, 796, 1899, 1934, 2304, 3015
XcmI CCANNNNNNNNNTGG 1 cut(s) 2239
XmiI GTMKAC 1 cut(s) 2154
XmnI GAANNNNTTC 4 cut(s) 8, 574, 734, 985
XspI CTAG 5 cut(s) 977, 1616, 1697, 2345, 3093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.