FvH4_7g24920
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
19136090 .. 19140555
4466 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g24920.t1

Sequence Viewer

Length: 2745 bp
ATGGAGAGCTTCAGATACCTTAATTTCCTAACCCTTTTGCTCTTCATCAACCTTTTCCAAACTAACACTGTTGTAAGCTCATTTGGCAATGAAACTGATCGACTGGCTTTGCTCAAGTTCAAAGAATCCATAGTCGGCGATCCACACGGGCTCTTGAACTCATGGAATGACTCCGTTCACTTCTGCAAATGGAGAGGAATCACTTGTGGCAGGCGGCATCAAAGAGTAACAACCTTGAACCTACAAGACGCTGATTTGCATGGAACCATATCACCATACATTGGCAACCTCTCCTTTCTCAGGACCTTCAGACTTTCCAACAACAGCTTCTCTGGCAAGATTCCACACCAAGTTGATCATTTGTTCCAACTGCAATCTCTCAATCTAACCTTTAACATGTTGGAAGGGGAAATTCCAGTCAACCTGACCTTCTGCCTGAAATTAAGCTTCATAAGCATTGGAGCAAACCGCCTTACCGGAAAAATTCCTTCAGAGATTGGTTCAATTATGAATCTTGTGCATCTCAATCTATGGAGAAACAATCTGACAGGAGGCATCCCACCTTCCTTGGGAAATCTTTCATCAATCCATGTACTCTCCTTGGCAGAGAACAATTTGGGGGGCACAGTTCCAGTGGAGATAGGACGACTGAGAAACCTCCGGTCTTTTAATACTAATTCCTGTAATCTCACCGCCAATTTCTCAACCCAACTGGCTGCACTCAACCTTGGGGACAATCAAATAGTGGGAACGATTCCTGAAACATTAGGGAATCTCAACAGCATGGTACTCTTGGCCCTTCATAAAAACTTATTCACGGGTATCATTCCATTTTCTTTTGGTAAGTTACAAAACCTTCAAATTTTAGCTCTAAATACCAATAGATTATCAGGTGAGATCCCATCTTCCTTAGGAAACCTCACCCAATTATTTGTACTCGATCTGTATGAAAACGAATTAGAAGGAAGCATTCCACCAACTATTGGATATTGCAAGAATTTACGGATTCTAAACATTTCACAAAACAAACTTAGTGGAGATGTACCACCAGAGATCATTGGCCTTTCCTCACTCTTAAATCTCGACTTGTCACAAAACTCACTAACTGGTAGCCTCCCTGATGAAGTTAGTAAGTTGAAGAATATCTATCACTTGGACATCTCCGGAAACAATTTGGTCAGAGAAATTCCAGAAACCATTGGAGACTGTGAGAGCCTTGAATTTCTTTCGTTACGATGGAATCTCATTCAAGGTACAATACCTTCTTCTTTGGCTTCTGTGAGAGGTCTTCAATATCTAGATCTTTCACAAAACAACTTGTCAGGAGAGATTCCAAAAGAACTACAGAGGCTTCCATTCTTGATATATTTGAACCTTTCGTCCAATCATTTGGAGGGTGAGGTACCCAAAGGAGGAGTTTTTCAAAACATGAGTGCAATATCTTTGGATGGAAATGCCAAACTTTGTGGTGATGTTTCAGAACTACACCTACCAGCATGCCCCATCAAAGTACCGAAGCAGAGAAAGTTGCATGGTTTCAAACTGAAGCTCACAATTTCTGTAGTCGTTGGATGTTCTGTTTTGTTTGCTGTCATGTTAGCTCTTTATTGGAAGAGGAAAATTCAGAAGAAGAAACCACCAACTGAAGTGGCACCAATGAACTTCCTTTCAAAGGTTTCATACCAGACACTTCATCAGGCCACTGGCGGATTCTCTCCGAGCAATCAAATTGGATCTGGCGGTTTTGGCTCTGTATACAAAGGGATTCTTGATCAACAAGAAAACTGTGTCGTTGCCATAAAGGTCCTCAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTTGTGGCCGAATGCAATGCACTGAGGAATATCCGACACAGGAATCTTGTGAAGATCATAACATGTTGCTCCAGCACGGATAACAATGGTAATGACTTCAAAGCTCTAATTTTCGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCATAGAGAAAACCATTCAGGGAATGGTTTGAACCTTCTCCAAAGACTCAATATTGCTGTTGATGTGGCGTCTGCACTGTGCTATTTTCATGATCATTGTGAACCACAAATCATTCACTGCGATATAAAGCCGAGTAACATTCTTCTTGATGATGACATGGCTGCTCGTGTTGGTGATTTTGGGTTAGCAAGACTCATCTCTGTGACCACGGACTCCTCTGAAATTCAAAATAGCACAATTGGGATAAAGGGAACCATTGGCTATGCTGCTCCGGAGTATGCTAGTGGTGTTGAGCCATCAAGAGAAGGAGATGTATATAGTTACGGCGTCCTGCTGTTGCAAATGTTTACAGGAAGAAGACCTATTGACGAAATGTTTAACGATGATTTGAACCTCCATAACTTTGTCAAGATGGCCATCCCAGGAAGACTATTGCAGATTGTGGATCCTGCTCTTCTTGCCAGTTTAGAAGTGACCGCCCCTGTAACAACACAAAATGAAGTGAGCTACACCAGTGGTTACAACAATGATGAAATCGAAGCAGATGAAGATAACATTGAGAACGAGAGTTTAAGCAGCATGAACACTTATGCACAGAAGTGCATACTTCCAACCCTTAAGATCGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGGATGTCTATGGAGGAAGTCCACAGAGACCTACACCGTATTAAAAATGCTTACAATGGTATCAACAACATCCGTCGAGAGAGGCCAAGAAGAAGCTAA

Protein Analysis

915

Amino Acids

101.11

Weight (kDa)

6.46

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 7.5e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 254 - 483 1.7e-14 Leucine-rich repeat region
LRR_8 PF13855 333 - 392 2.1e-06 Leucine rich repeat
LRR_8 PF13855 405 - 464 1.8e-07 Leucine rich repeat
Pkinase PF00069 574 - 798 1.7e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 575 - 792 1.5e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1402
AccB1I GGYRCC 2 cut(s) 1402, 1651
AccB7I CCANNNNNTGG 2 cut(s) 281, 983
AccI GTMKAC 1 cut(s) 1755
AccIII TCCGGA 2 cut(s) 1163, 2260
AciI CCGC 6 cut(s) 214, 469, 693, 1707, 1740, 2466
AclWI GGATC 5 cut(s) 134, 892, 1741, 2429, 2442
AcoI YGGCCR 2 cut(s) 1845, 2403
AcsI RAATTY 8 cut(s) 411, 483, 861, 997, 1185, 1220, 1620, 2211
AcuI CTGAAG 4 cut(s) 292, 474, 1565, 1665
AcyI GRCGYC 2 cut(s) 2057, 2316
AfaI GTAC 7 cut(s) 594, 789, 936, 1044, 1255, 1404, 1512
AfiI CCNNNNNNNGG 6 cut(s) 281, 300, 569, 983, 1412, 1672
AflII CTTAAG 1 cut(s) 2606
AflIII ACRYGT 2 cut(s) 396, 1901
AjnI CCWGG 1 cut(s) 2410
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AleI CACNNNNGTG 1 cut(s) 2587
AloI GAACNNNNNNTCC 2 cut(s) 1364, 1396
Alw26I GTCTC 2 cut(s) 1197, 2667
AlwI GGATC 5 cut(s) 134, 892, 1741, 2429, 2442
Aor13HI TCCGGA 2 cut(s) 1163, 2260
AoxI GGCC 6 cut(s) 795, 1060, 1698, 1845, 2403, 2729
ApeKI GCWGC 5 cut(s) 716, 1987, 2150, 2255, 2565
ApoI RAATTY 8 cut(s) 411, 483, 861, 997, 1185, 1220, 1620, 2211
Asp700I GAANNNNTTC 1 cut(s) 577
Asp718I GGTACC 1 cut(s) 1402
AspS9I GGNCC 3 cut(s) 303, 796, 1804
AsuHPI GGTGA 8 cut(s) 264, 682, 905, 913, 1409, 1481, 2174, 2628
AvaII GGWCC 2 cut(s) 303, 1804
AxyI CCTNAGG 1 cut(s) 910
BaeGI GKGCMC 1 cut(s) 626
BaeI ACNNNNGTAYC 2 cut(s) 2689, 2722
BalI TGGCCA 1 cut(s) 2405
BamHI GGATCC 1 cut(s) 2434
BanI GGYRCC 2 cut(s) 1402, 1651
BanII GRGCYC 1 cut(s) 153
BarI GAAGNNNNNNTAC 2 cut(s) 1246, 1278
BauI CACGAG 1 cut(s) 2154
BbsI GAAGAC 3 cut(s) 1280, 2353, 2422
BbvI GCAGC 5 cut(s) 703, 1974, 2137, 2242, 2577
BccI CCATC 7 cut(s) 910, 1230, 1442, 1511, 2293, 2395, 2414
BceAI ACGGC 1 cut(s) 2329
BcgI CGANNNNNNTGC 2 cut(s) 1838, 1872
BciT130I CCWGG 1 cut(s) 2412
BclI TGATCA 3 cut(s) 355, 1771, 2080
BcoDI GTCTC 2 cut(s) 1197, 2667
BfaI CTAG 2 cut(s) 1298, 2271
BfmI CTRYAG 2 cut(s) 1343, 1560
BfrI CTTAAG 1 cut(s) 2606
BglII AGATCT 1 cut(s) 1300
BisI GCNGC 6 cut(s) 215, 717, 1988, 2151, 2256, 2566
BlsI GCNGC 6 cut(s) 216, 718, 1989, 2152, 2257, 2567
Bme1390I CCNGG 1 cut(s) 2412
Bme18I GGWCC 2 cut(s) 303, 1804
BmgT120I GGNCC 3 cut(s) 303, 796, 1804
BmiI GGNNCC 5 cut(s) 265, 1404, 1653, 2242, 2436
BmrFI CCNGG 1 cut(s) 2412
BmsI GCATC 3 cut(s) 226, 529, 564
BpiI GAAGAC 3 cut(s) 1280, 2353, 2422
BpmI CTGGAG 1 cut(s) 1894
BpuEI CTTGAG 1 cut(s) 98
BsaBI GATNNNNATC 1 cut(s) 2405
BsaHI GRCGYC 2 cut(s) 2057, 2316
BsaI GGTCTC 1 cut(s) 2667
BsaJI CCNNGG 6 cut(s) 567, 600, 727, 2196, 2410, 2639
BsaWI WCCGGW 4 cut(s) 476, 660, 1163, 2260
Bsc4I CCNNNNNNNGG 6 cut(s) 281, 300, 569, 983, 1412, 1672
Bse1I ACTGG 8 cut(s) 108, 416, 632, 717, 1111, 1708, 2451, 2502
Bse21I CCTNAGG 1 cut(s) 910
Bse3DI GCAATG 2 cut(s) 94, 1861
Bse8I GATNNNNATC 1 cut(s) 2405
BseAI TCCGGA 2 cut(s) 1163, 2260
BseBI CCWGG 1 cut(s) 2412
BseDI CCNNGG 6 cut(s) 567, 600, 727, 2196, 2410, 2639
BseGI GGATG 6 cut(s) 555, 1453, 1577, 2406, 2655, 2715
BseJI GATNNNNATC 1 cut(s) 2405
BseLI CCNNNNNNNGG 6 cut(s) 281, 300, 569, 983, 1412, 1672
BseMI GCAATG 2 cut(s) 94, 1861
BseMII CTCAG 3 cut(s) 313, 641, 1853
BseNI ACTGG 8 cut(s) 108, 416, 632, 717, 1111, 1708, 2451, 2502
BseRI GAGGAG 3 cut(s) 1428, 1994, 2194
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 5 cut(s) 703, 1974, 2137, 2242, 2577
BsgI GTGCAG 2 cut(s) 702, 2046
BshFI GGCC 6 cut(s) 797, 1062, 1700, 1847, 2405, 2731
BshNI GGYRCC 2 cut(s) 1402, 1651
BsiSI CCGG 4 cut(s) 477, 661, 1164, 2261
BslFI GGGAC 1 cut(s) 746
BslI CCNNNNNNNGG 6 cut(s) 281, 300, 569, 983, 1412, 1672
BsmAI GTCTC 2 cut(s) 1197, 2667
BsmFI GGGAC 1 cut(s) 746
BsmI GAATGC 2 cut(s) 969, 1856
BsnI GGCC 6 cut(s) 797, 1062, 1700, 1847, 2405, 2731
Bso31I GGTCTC 1 cut(s) 2667
Bsp1286I GDGCHC 2 cut(s) 153, 626
Bsp13I TCCGGA 2 cut(s) 1163, 2260
BspACI CCGC 6 cut(s) 214, 469, 693, 1707, 1740, 2466
BspANI GGCC 6 cut(s) 797, 1062, 1700, 1847, 2405, 2731
BspCNI CTCAG 3 cut(s) 312, 642, 1854
BspEI TCCGGA 2 cut(s) 1163, 2260
BspHI TCATGA 1 cut(s) 2077
BspLI GGNNCC 5 cut(s) 265, 1404, 1653, 2242, 2436
BspPI GGATC 5 cut(s) 134, 892, 1741, 2429, 2442
BspQI GCTCTTC 2 cut(s) 47, 2448
BspT107I GGYRCC 2 cut(s) 1402, 1651
BspTI CTTAAG 1 cut(s) 2606
BspTNI GGTCTC 1 cut(s) 2667
BsrDI GCAATG 2 cut(s) 94, 1861
BsrI ACTGG 8 cut(s) 108, 416, 632, 717, 1111, 1708, 2451, 2502
BssECI CCNNGG 6 cut(s) 567, 600, 727, 2196, 2410, 2639
BssNAI GTATAC 1 cut(s) 1756
BssNI GRCGYC 2 cut(s) 2057, 2316
BssSI CACGAG 1 cut(s) 2154
BssT1I CCWWGG 4 cut(s) 567, 600, 727, 2639
Bst1107I GTATAC 1 cut(s) 1756
Bst2BI CACGAG 1 cut(s) 2154
Bst2UI CCWGG 1 cut(s) 2412
Bst4CI ACNGT 6 cut(s) 70, 628, 1208, 1787, 2067, 2684
Bst6I CTCTTC 3 cut(s) 47, 1607, 2448
BstACI GRCGYC 2 cut(s) 2057, 2316
BstAFI CTTAAG 1 cut(s) 2606
BstC8I GCNNGC 3 cut(s) 212, 1498, 2623
BstDEI CTNAG 5 cut(s) 299, 650, 910, 1031, 1862
BstDSI CCRYGG 1 cut(s) 2196
BstENI CCTNNNNNAGG 2 cut(s) 298, 1670
BstF5I GGATG 6 cut(s) 555, 1453, 1577, 2406, 2655, 2715
BstMAI GTCTC 2 cut(s) 1197, 2667
BstMWI GCNNNNNNNGC 5 cut(s) 84, 333, 453, 1746, 2447
BstNI CCWGG 1 cut(s) 2412
BstNSI RCATGY 4 cut(s) 400, 1500, 1905, 2625
BstSCI CCNGG 1 cut(s) 2410
BstSFI CTRYAG 2 cut(s) 1343, 1560
BstSLI GKGCMC 1 cut(s) 626
BstV1I GCAGC 5 cut(s) 703, 1974, 2137, 2242, 2577
BstV2I GAAGAC 3 cut(s) 1280, 2353, 2422
BstX2I RGATCY 4 cut(s) 897, 1300, 1733, 2434
BstXI CCANNNNNNTGG 1 cut(s) 1390
BstYI RGATCY 4 cut(s) 897, 1300, 1733, 2434
BstZ17I GTATAC 1 cut(s) 1756
Bsu36I CCTNAGG 1 cut(s) 910
BsuRI GGCC 6 cut(s) 797, 1062, 1700, 1847, 2405, 2731
BtgI CCRYGG 1 cut(s) 2196
BtsCI GGATG 6 cut(s) 555, 1453, 1577, 2406, 2655, 2715
BtsI GCAGTG 1 cut(s) 2104
BtsIMutI CAGTG 7 cut(s) 66, 639, 1701, 1859, 2063, 2104, 2509
Cac8I GCNNGC 3 cut(s) 212, 1498, 2623
CciI TCATGA 1 cut(s) 2077
Cfr13I GGNCC 3 cut(s) 303, 796, 1804
CseI GACGC 3 cut(s) 257, 2046, 2305
Csp6I GTAC 7 cut(s) 593, 788, 935, 1043, 1254, 1403, 1511
CspCI CAANNNNNGTGG 8 cut(s) 549, 584, 1015, 1050, 1447, 1482, 1629, 1664
CviQI GTAC 7 cut(s) 593, 788, 935, 1043, 1254, 1403, 1511
DdeI CTNAG 5 cut(s) 299, 650, 910, 1031, 1862
EaeI YGGCCR 2 cut(s) 1845, 2403
Eam1104I CTCTTC 3 cut(s) 47, 1607, 2448
EarI CTCTTC 3 cut(s) 47, 1607, 2448
EciI GGCGGA 1 cut(s) 1722
Eco130I CCWWGG 4 cut(s) 567, 600, 727, 2639
Eco24I GRGCYC 1 cut(s) 153
Eco31I GGTCTC 1 cut(s) 2667
Eco47I GGWCC 2 cut(s) 303, 1804
Eco57I CTGAAG 4 cut(s) 292, 474, 1565, 1665
Eco81I CCTNAGG 1 cut(s) 910
EcoNI CCTNNNNNAGG 2 cut(s) 298, 1670
EcoO109I RGGNCCY 2 cut(s) 303, 1804
EcoRII CCWGG 1 cut(s) 2410
EcoT14I CCWWGG 4 cut(s) 567, 600, 727, 2639
EcoT38I GRGCYC 1 cut(s) 153
ErhI CCWWGG 4 cut(s) 567, 600, 727, 2639
FalI AAGNNNNNCTT 2 cut(s) 1752, 1784
FaqI GGGAC 1 cut(s) 746
FbaI TGATCA 3 cut(s) 355, 1771, 2080
FblI GTMKAC 1 cut(s) 1755
Fnu4HI GCNGC 6 cut(s) 215, 717, 1988, 2151, 2256, 2566
FokI GGATG 6 cut(s) 542, 1460, 1584, 2393, 2662, 2702
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 6 cut(s) 215, 717, 1988, 2151, 2256, 2566
FspBI CTAG 2 cut(s) 1298, 2271
GluI GCNGC 6 cut(s) 215, 717, 1988, 2151, 2256, 2566
GsuI CTGGAG 1 cut(s) 1894
HaeIII GGCC 6 cut(s) 797, 1062, 1700, 1847, 2405, 2731
HapII CCGG 4 cut(s) 477, 661, 1164, 2261
HgaI GACGC 3 cut(s) 257, 2046, 2305
Hin1I GRCGYC 2 cut(s) 2057, 2316
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HindIII AAGCTT 1 cut(s) 445
HpaII CCGG 4 cut(s) 477, 661, 1164, 2261
HphI GGTGA 8 cut(s) 264, 682, 905, 913, 1409, 1481, 2174, 2628
Hpy166II GTNNAC 6 cut(s) 178, 421, 1756, 2090, 2337, 2668
Hpy8I GTNNAC 6 cut(s) 178, 421, 1756, 2090, 2337, 2668
Hpy99I CGWCG 1 cut(s) 2724
HpyCH4III ACNGT 6 cut(s) 70, 628, 1208, 1787, 2067, 2684
HpyF10VI GCNNNNNNNGC 5 cut(s) 84, 333, 453, 1746, 2447
HpyF3I CTNAG 5 cut(s) 299, 650, 910, 1031, 1862
Hsp92I GRCGYC 2 cut(s) 2057, 2316
Kpn2I TCCGGA 2 cut(s) 1163, 2260
KpnI GGTACC 1 cut(s) 1406
Ksp22I TGATCA 3 cut(s) 355, 1771, 2080
LguI GCTCTTC 2 cut(s) 47, 2448
LmnI GCTCC 4 cut(s) 461, 1826, 1913, 2263
Lsp1109I GCAGC 5 cut(s) 703, 1974, 2137, 2242, 2577
LweI GCATC 3 cut(s) 226, 529, 564
MaeI CTAG 2 cut(s) 1298, 2271
MfeI CAATTG 1 cut(s) 2226
MflI RGATCY 4 cut(s) 897, 1300, 1733, 2434
MhlI GDGCHC 2 cut(s) 153, 626
MlsI TGGCCA 1 cut(s) 2405
MluNI TGGCCA 1 cut(s) 2405
MlyI GAGTC 4 cut(s) 164, 2028, 2175, 2195
MmeI TCCRAC 6 cut(s) 342, 381, 391, 1549, 1897, 2624
Mox20I TGGCCA 1 cut(s) 2405
MroI TCCGGA 2 cut(s) 1163, 2260
MroXI GAANNNNTTC 1 cut(s) 577
MscI TGGCCA 1 cut(s) 2405
MseI TTAA 9 cut(s) 21, 393, 443, 669, 1076, 2367, 2561, 2607, 2688
MslI CAYNNNNRTG 2 cut(s) 2189, 2587
Msp20I TGGCCA 1 cut(s) 2405
MspCI CTTAAG 1 cut(s) 2606
MspI CCGG 4 cut(s) 477, 661, 1164, 2261
MspR9I CCNGG 1 cut(s) 2412
MunI CAATTG 1 cut(s) 2226
Mva1269I GAATGC 2 cut(s) 969, 1856
MvaI CCWGG 1 cut(s) 2412
MwoI GCNNNNNNNGC 5 cut(s) 84, 333, 453, 1746, 2447
NlaIV GGNNCC 5 cut(s) 265, 1404, 1653, 2242, 2436
NmeAIII GCCGAG 1 cut(s) 2145
NmuCI GTSAC 3 cut(s) 1089, 2191, 2461
NspI RCATGY 4 cut(s) 400, 1500, 1905, 2625
OliI CACNNNNGTG 1 cut(s) 2587
PaeI GCATGC 2 cut(s) 1500, 2625
PagI TCATGA 1 cut(s) 2077
PciI ACATGT 2 cut(s) 396, 1901
PciSI GCTCTTC 2 cut(s) 47, 2448
PctI GAATGC 2 cut(s) 969, 1856
PdmI GAANNNNTTC 1 cut(s) 577
PflMI CCANNNNNTGG 2 cut(s) 281, 983
PkrI GCNGC 6 cut(s) 216, 718, 1989, 2152, 2257, 2567
PleI GAGTC 4 cut(s) 164, 2028, 2175, 2195
PpsI GAGTC 4 cut(s) 164, 2028, 2175, 2195
PpuMI RGGWCCY 2 cut(s) 303, 1804
PscI ACATGT 2 cut(s) 396, 1901
Psp5II RGGWCCY 2 cut(s) 303, 1804
Psp6I CCWGG 1 cut(s) 2410
PspGI CCWGG 1 cut(s) 2410
PspN4I GGNNCC 5 cut(s) 265, 1404, 1653, 2242, 2436
PspPI GGNCC 3 cut(s) 303, 796, 1804
PspPPI RGGWCCY 2 cut(s) 303, 1804
PsrI GAACNNNNNNTAC 2 cut(s) 1473, 1505
PsuI RGATCY 4 cut(s) 897, 1300, 1733, 2434
RsaI GTAC 7 cut(s) 594, 789, 936, 1044, 1255, 1404, 1512
RsaNI GTAC 7 cut(s) 593, 788, 935, 1043, 1254, 1403, 1511
RseI CAYNNNNRTG 2 cut(s) 2189, 2587
SapI GCTCTTC 2 cut(s) 47, 2448
SaqAI TTAA 9 cut(s) 21, 393, 443, 669, 1076, 2367, 2561, 2607, 2688
SatI GCNGC 6 cut(s) 215, 717, 1988, 2151, 2256, 2566
Sau96I GGNCC 3 cut(s) 303, 796, 1804
SchI GAGTC 4 cut(s) 164, 2028, 2175, 2195
ScrFI CCNGG 1 cut(s) 2412
SduI GDGCHC 2 cut(s) 153, 626
SfaNI GCATC 3 cut(s) 226, 529, 564
SfcI CTRYAG 2 cut(s) 1343, 1560
SinI GGWCC 2 cut(s) 303, 1804
SmiMI CAYNNNNRTG 2 cut(s) 2189, 2587
SmlI CTYRAG 2 cut(s) 113, 2606
SmoI CTYRAG 2 cut(s) 113, 2606
SphI GCATGC 2 cut(s) 1500, 2625
SsiI CCGC 6 cut(s) 214, 469, 693, 1707, 1740, 2466
SspI AATATT 1 cut(s) 2041
SspMI CTAG 2 cut(s) 1298, 2271
StyD4I CCNGG 1 cut(s) 2410
StyI CCWWGG 4 cut(s) 567, 600, 727, 2639
TaaI ACNGT 6 cut(s) 70, 628, 1208, 1787, 2067, 2684
TaqI TCGA 6 cut(s) 100, 939, 1083, 1953, 2526, 2722
TatI WGTACW 2 cut(s) 592, 934
TauI GCSGC 1 cut(s) 217
Tru1I TTAA 9 cut(s) 21, 393, 443, 669, 1076, 2367, 2561, 2607, 2688
Tru9I TTAA 9 cut(s) 21, 393, 443, 669, 1076, 2367, 2561, 2607, 2688
TscAI CASTG 7 cut(s) 73, 639, 1708, 1866, 2070, 2111, 2509
TseFI GTSAC 3 cut(s) 1089, 2191, 2461
TseI GCWGC 5 cut(s) 716, 1987, 2150, 2255, 2565
Tsp45I GTSAC 3 cut(s) 1089, 2191, 2461
TspGWI ACGGA 5 cut(s) 163, 1018, 1931, 2213, 2708
TspRI CASTG 7 cut(s) 73, 639, 1708, 1866, 2070, 2111, 2509
Van91I CCANNNNNTGG 2 cut(s) 281, 983
Vha464I CTTAAG 1 cut(s) 2606
VpaK11BI GGWCC 2 cut(s) 303, 1804
XagI CCTNNNNNAGG 2 cut(s) 298, 1670
XapI RAATTY 8 cut(s) 411, 483, 861, 997, 1185, 1220, 1620, 2211
XbaI TCTAGA 1 cut(s) 1297
XceI RCATGY 4 cut(s) 400, 1500, 1905, 2625
XcmI CCANNNNNNNNNTGG 2 cut(s) 1840, 2009
XmiI GTMKAC 1 cut(s) 1755
XmnI GAANNNNTTC 1 cut(s) 577
XspI CTAG 2 cut(s) 1298, 2271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.