Rroxscaffold_7G00190680
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
30954300 .. 30958525
4226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00190680.1

Sequence Viewer

Length: 3132 bp
ATGGAGTTTCATGTCATAACCCTTCTCCTTTTCATGAGCCTTTTCCTTCCTACCACTCTTGTAAAGGCACTTGGAAATGAAACTGATCGAATCGCTTTGCTCAAATTCAAAGAATCCATAGCGAGTGATCCACATGGGTTGTTGAACTCGTGGAATGACTCTCTTCACTTTTGCAACTGGCATGGGATTTCCTGCGGCTCAAGGCATCAGAGAGTAGTAGCCTTGAACCTCTCTTATTCTGATTTGCATGGAACCATATCACCTTACATTGGCAACCTCTCTTTTCTAAGGCGCATCGACCTTAAAAGTAATATCTTCTTTGGCAAGGTTCCACAGCAACTTGATCAATTGTTCCGACTCCGCTATCTCAAACTTGTTCATAACAAGTTAGAGGGAGAAATTCCAGTCAACCTGACCTTCTGCACGGAACTGTATTACTTAAATCTGGGATCAAACCGTCTTACAGGCTCAATTCCCCGTGAGATCGGCTCATTGGTGAAGCTGGCGTATCTTCAACTAGAGTCAAACAATTTGACCGGTGGCATCCCACCTTCCATGGGAAACCTTTCATCAATAGAGTCGCTTCCCTGGGCGTCTAACAATTTGGTTGGCAATGTTCCAGAGGAGATGGGTCGATTGAGAAGCTTGGCACTTTTTTCAGTTACTGAAAATAATCTCTCTGGTACGATCCCTCCCTCTCTGTATAACATATCATCTATGGAAGCATTGTCAATTTCAGCAAATAATTTTAAGGGCACCATTCCACCTGGAATAGGCCTCAAAATGCCTAAACTCCTAGTCATGTACCTTGGTGGAAATAAATTATCTGGCCACATCCCATCTTCATTGTCCAATGCTTCCCAGCTTCAAATACTAGATCTTCCGGCTAATAGTTTTGTGGGGACAGTTCCGAATATATTTGGACATCTTCTAGACCTCCAATGGCTTGGTTTAGGTACCAATAACTTAGGAAGTTATTCAGCTAACGACTTGGGTTTTATGACATCCTTGACAAATTGCACGAAACTAGAACTTCTTGGTTTGAATAACAACAAATTCGGAGGTGTTCTACCAAACTCTATGGCCAATTTGTCAACCAACCTGACTAGTCTCAGAATTGATAATAATCAAATATCAGGAATGATTCCGACAACATTAGAAAACCTCAACAATTTAATACTCCTGTCTTTGGAGGCTAATCTATTTACAGGAGTCATTCCTATTTCTTTGGGGAAGTTAAAAAAGCTGCAAATATTGTCTTTAAGTAGAAATAGATTATCAGGACGGATCCCTTCTTCTATCGGAAACCTCTCACATTTGTTTGAACTCAACTTATCAGCAAATGAATTAGAAGGAAGCATTCCTTCAAATATTGGTAACTGCCAAAGTTTGCAGGAGATGGATATATCACGCAATAAGCTAAGTGGAGACATACCATCAGAGGTCATTGGTCTGTCCTCCTTATCTCTCGTGCTAAACTTATCGCAAAACTGGCTAACTGGCGGTCTGCCTGTGGAAGTCGGTAAGCTGAAGACTATCAATACACTGGACATCTCTGATAATAATTTGACTGGAGGAATTCCAGATATTATTGGAGGTTGTCTGAGCCTTGAATTTCTTTACCTACAAGGGAATCTCTTTCAAGGAATCATACCTTCTTCTTTGGCTTCTTTGAGAGGTCTTCAGTATCTAGACCTTTCACGAAACAACTTGTCAGGATATATTCCAAAAGACCTACAGAGACTTCCATTTTTGTTATATTTGAACCTTTCGTCCAATAACCTCGAGGGTGAGGTACCAAAAGAAGGAATTTTCCGAAACACAAGTGCGATGTCATTGGATGGAAATACCAAACTTTGTGGTGGTGTTTCGAAATTGCAGCTACCAAAATGCCCCATCAAAGTCCCAAAGCAAAGAGAGTTTCATGGTTTCAAACTGAAGTTCATAATTTCTTTAGTCGCCGGATGCTCTCTTCTGTTAGCAGTCATCTTATCTCTTTATTGGAGGAGAAAAACTCAAAAGAAGAAACCATTATTATCTGCAGTGTCATCAATCAACTTCCTATCAAAGGTTTCATACCAGACACTTCATCAAGCTACTGACGGATTCTCTCCGAGCAATCAAATTGGATCAGGTGGTTTTGGCTCTGTATACAAAGGGATTCTTGATCAAGAAGAAAACAATGTTGTTGCCATAAAAGTCCTCAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTTGTGGCTGAATGCAATGCACTGAGAAATATCCGGCATAGGAATCTTGTAAAGATCTTAACATGTTGCTCCAGCACAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACGAATCAAGGAGTTTGAACCTTCTTCAAAGAATGAATATTGTTGTTGATGTGGCTTCTGCATTGTGTTATCTTCATGACCATTGTGAACCAAAAATTATTCACCGTGATATAAAGCCAAGCAATGTTCTTCTTGATGATGACATGGTTGCTCGTGTAGGTGATTTTGGGTTAGCAAGACTCATCCCACCGACCACGAACTCCTTTCAAAATCAAAGTAGCACACTTGGAATTAAAGGAACCATTGGCTATGCTGCTCCAGAGTATGCAGTTGGTGTTGAGCCATCAAAAAAGGGGGATGTATATAGTTATGGGATTCTTGTGTTGCACCTGTTCTCCGGAAGAAAACCCACTGATGAAATGTTTGTGGACGGTTGCAATATCCATACTTTTGTTAAGACAGCCATTAAAGCAGGTAGACTTATGGAAATTGTGGATCCTACTCTTATTGCCACTCTAGAAGAGACTGCAACTTCAACAGACAATAGAGTGACTAGCATATGTGGTTATAACAATGAAATCAAAGCAGATGAAGAGAACATTGATGATGAGAATTTAAGCAAGATGAACACTTATGTGTTAAAGTGCATACTTTCAACCCTTAAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGGATGTCTATGGAGGAGGTCCACAAGGAGTTACACCATATAAAAAACGCTTACACTGGTGTTGACATCAATCCAAAGAGGCTGAGAAGAAGCTAA

Protein Analysis

1043

Amino Acids

114.58

Weight (kDa)

8.36

Isoelectric Point (pI)

39.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 65 2.8e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 291 3.3e-11 Leucine-rich repeat region
LRR_8 PF13855 240 - 298 1e-05 Leucine rich repeat
LRR_8 PF13855 366 - 426 1.3e-08 Leucine rich repeat
LRR_8 PF13855 537 - 595 8.5e-10 Leucine rich repeat
Pkinase PF00069 706 - 918 8.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 707 - 919 4.8e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2904
AbsI CCTCGAGG 1 cut(s) 1784
Acc36I ACCTGC 1 cut(s) 2798
Acc65I GGTACC 2 cut(s) 956, 1795
AccB1I GGYRCC 3 cut(s) 755, 956, 1795
AccI GTMKAC 2 cut(s) 2151, 2812
AccIII TCCGGA 1 cut(s) 2732
AciI CCGC 3 cut(s) 195, 361, 1503
AclWI GGATC 8 cut(s) 122, 457, 682, 1282, 1295, 2137, 2825, 2838
AcoI YGGCCR 2 cut(s) 829, 1083
AcsI RAATTY 7 cut(s) 104, 399, 1055, 1578, 1613, 1809, 2947
AcuI CTGAAG 3 cut(s) 1550, 1667, 1958
AcyI GRCGYC 1 cut(s) 593
AfaI GTAC 4 cut(s) 685, 806, 958, 1797
AfiI CCNNNNNNNGG 6 cut(s) 269, 557, 773, 1189, 1805, 2068
AflII CTTAAG 1 cut(s) 2996
AflIII ACRYGT 1 cut(s) 2297
AgeI ACCGGT 1 cut(s) 536
AhlI ACTAGT 1 cut(s) 1106
AjnI CCWGG 2 cut(s) 587, 766
AleI CACNNNNGTG 1 cut(s) 2969
AloI GAACNNNNNNTCC 2 cut(s) 1757, 1789
Alw26I GTCTC 4 cut(s) 1115, 1422, 1735, 2852
AlwI GGATC 8 cut(s) 122, 457, 682, 1282, 1295, 2137, 2825, 2838
AlwNI CAGNNNCTG 1 cut(s) 665
Ama87I CYCGRG 1 cut(s) 1784
Aor13HI TCCGGA 1 cut(s) 2732
AoxI GGCC 3 cut(s) 775, 829, 1083
ApeKI GCWGC 4 cut(s) 1246, 1879, 2383, 2648
ApoI RAATTY 7 cut(s) 104, 399, 1055, 1578, 1613, 1809, 2947
AsiGI ACCGGT 1 cut(s) 536
Asp700I GAANNNNTTC 2 cut(s) 565, 976
Asp718I GGTACC 2 cut(s) 956, 1795
AspLEI GCGC 1 cut(s) 294
AspS9I GGNCC 1 cut(s) 3055
AsuHPI GGTGA 6 cut(s) 252, 508, 1802, 2489, 2567, 3018
AsuII TTCGAA 1 cut(s) 1871
AvaI CYCGRG 1 cut(s) 1784
AvaII GGWCC 1 cut(s) 3055
BaeGI GKGCMC 1 cut(s) 758
BalI TGGCCA 2 cut(s) 831, 1085
BamHI GGATCC 2 cut(s) 1287, 2830
BanI GGYRCC 3 cut(s) 755, 956, 1795
BauI CACGAG 3 cut(s) 148, 1469, 2547
BbsI GAAGAC 2 cut(s) 1538, 1673
BbvI GCAGC 4 cut(s) 1233, 1891, 2370, 2635
BccI CCATC 7 cut(s) 622, 847, 1393, 1444, 1835, 1904, 2686
BciT130I CCWGG 2 cut(s) 589, 768
BclI TGATCA 2 cut(s) 343, 2167
BcoDI GTCTC 4 cut(s) 1115, 1422, 1735, 2852
BcuI ACTAGT 1 cut(s) 1106
BfmI CTRYAG 2 cut(s) 1736, 2040
BfrI CTTAAG 1 cut(s) 2996
BfuAI ACCTGC 1 cut(s) 2798
BglII AGATCT 2 cut(s) 877, 2289
BisI GCNGC 5 cut(s) 196, 1247, 1880, 2384, 2649
BlsI GCNGC 5 cut(s) 197, 1248, 1881, 2385, 2650
Bme1390I CCNGG 2 cut(s) 589, 768
Bme18I GGWCC 1 cut(s) 3055
BmeT110I CYCGRG 1 cut(s) 1784
BmgT120I GGNCC 1 cut(s) 3055
BmiI GGNNCC 8 cut(s) 253, 330, 757, 958, 1289, 1797, 2635, 2832
BmrFI CCNGG 2 cut(s) 589, 768
BmsI GCATC 4 cut(s) 214, 303, 552, 1955
BpiI GAAGAC 2 cut(s) 1538, 1673
BplI GAGNNNNNCTC 4 cut(s) 473, 505, 1999, 2031
BpmI CTGGAG 3 cut(s) 1593, 2290, 2637
Bpu14I TTCGAA 1 cut(s) 1871
BpuEI CTTGAG 1 cut(s) 184
BsaBI GATNNNNATC 1 cut(s) 1125
BsaHI GRCGYC 1 cut(s) 593
BsaJI CCNNGG 5 cut(s) 555, 587, 588, 808, 3029
BsaWI WCCGGW 2 cut(s) 536, 2732
BsaXI ACNNNNNCTCC 4 cut(s) 676, 706, 2714, 2744
Bsc4I CCNNNNNNNGG 6 cut(s) 269, 557, 773, 1189, 1805, 2068
Bse118I RCCGGY 1 cut(s) 536
Bse1I ACTGG 7 cut(s) 182, 404, 1496, 1504, 1551, 1576, 3097
Bse3DI GCAATG 3 cut(s) 619, 2257, 2524
Bse8I GATNNNNATC 1 cut(s) 1125
BseAI TCCGGA 1 cut(s) 2732
BseBI CCWGG 2 cut(s) 589, 768
BseDI CCNNGG 5 cut(s) 555, 587, 588, 808, 3029
BseGI GGATG 8 cut(s) 543, 834, 1004, 1846, 1970, 2577, 2698, 3045
BseJI GATNNNNATC 1 cut(s) 1125
BseLI CCNNNNNNNGG 6 cut(s) 269, 557, 773, 1189, 1805, 2068
BseMI GCAATG 3 cut(s) 619, 2257, 2524
BseMII CTCAG 4 cut(s) 1126, 1595, 2249, 3110
BseNI ACTGG 7 cut(s) 182, 404, 1496, 1504, 1551, 1576, 3097
BseRI GAGGAG 4 cut(s) 638, 2020, 2390, 3065
BseSI GKGCMC 1 cut(s) 758
BseXI GCAGC 4 cut(s) 1233, 1891, 2370, 2635
BseYI CCCAGC 1 cut(s) 861
BsgI GTGCAG 2 cut(s) 406, 2369
BshFI GGCC 3 cut(s) 777, 831, 1085
BshNI GGYRCC 3 cut(s) 755, 956, 1795
BshTI ACCGGT 1 cut(s) 536
BsiHKCI CYCGRG 1 cut(s) 1784
BsiSI CCGG 5 cut(s) 537, 884, 1962, 2269, 2733
BslFI GGGAC 2 cut(s) 916, 1889
BslI CCNNNNNNNGG 6 cut(s) 269, 557, 773, 1189, 1805, 2068
BsmAI GTCTC 4 cut(s) 1115, 1422, 1735, 2852
BsmFI GGGAC 2 cut(s) 916, 1889
BsmI GAATGC 2 cut(s) 1359, 2252
BsnI GGCC 3 cut(s) 777, 831, 1085
BsoBI CYCGRG 1 cut(s) 1784
Bsp119I TTCGAA 1 cut(s) 1871
Bsp1286I GDGCHC 1 cut(s) 758
Bsp13I TCCGGA 1 cut(s) 2732
Bsp19I CCATGG 1 cut(s) 555
BspACI CCGC 3 cut(s) 195, 361, 1503
BspANI GGCC 3 cut(s) 777, 831, 1085
BspCNI CTCAG 4 cut(s) 1125, 1596, 2250, 3111
BspEI TCCGGA 1 cut(s) 2732
BspHI TCATGA 2 cut(s) 33, 2470
BspLI GGNNCC 8 cut(s) 253, 330, 757, 958, 1289, 1797, 2635, 2832
BspMAI CTGCAG 1 cut(s) 2044
BspMI ACCTGC 1 cut(s) 2798
BspPI GGATC 8 cut(s) 122, 457, 682, 1282, 1295, 2137, 2825, 2838
BspT104I TTCGAA 1 cut(s) 1871
BspT107I GGYRCC 3 cut(s) 755, 956, 1795
BspTI CTTAAG 1 cut(s) 2996
BsrDI GCAATG 3 cut(s) 619, 2257, 2524
BsrFI RCCGGY 1 cut(s) 536
BsrI ACTGG 7 cut(s) 182, 404, 1496, 1504, 1551, 1576, 3097
BssAI RCCGGY 1 cut(s) 536
BssECI CCNNGG 5 cut(s) 555, 587, 588, 808, 3029
BssNAI GTATAC 1 cut(s) 2152
BssNI GRCGYC 1 cut(s) 593
BssSI CACGAG 3 cut(s) 148, 1469, 2547
BssT1I CCWWGG 3 cut(s) 555, 808, 3029
Bst1107I GTATAC 1 cut(s) 2152
Bst2BI CACGAG 3 cut(s) 148, 1469, 2547
Bst2UI CCWGG 2 cut(s) 589, 768
Bst4CI ACNGT 5 cut(s) 432, 458, 907, 2501, 2768
Bst6I CTCTTC 4 cut(s) 168, 1977, 2850, 2922
BstACI GRCGYC 1 cut(s) 593
BstAFI CTTAAG 1 cut(s) 2996
BstBI TTCGAA 1 cut(s) 1871
BstC8I GCNNGC 2 cut(s) 504, 3013
BstDEI CTNAG 7 cut(s) 287, 967, 1112, 1421, 1604, 2258, 3119
BstDSI CCRYGG 1 cut(s) 555
BstENI CCTNNNNNAGG 2 cut(s) 771, 2066
BstF5I GGATG 8 cut(s) 543, 834, 1004, 1846, 1970, 2577, 2698, 3045
BstHHI GCGC 1 cut(s) 294
BstMAI GTCTC 4 cut(s) 1115, 1422, 1735, 2852
BstMWI GCNNNNNNNGC 2 cut(s) 1492, 2804
BstNI CCWGG 2 cut(s) 589, 768
BstNSI RCATGY 2 cut(s) 2301, 3015
BstSCI CCNGG 2 cut(s) 587, 766
BstSFI CTRYAG 2 cut(s) 1736, 2040
BstSLI GKGCMC 1 cut(s) 758
BstV1I GCAGC 4 cut(s) 1233, 1891, 2370, 2635
BstV2I GAAGAC 2 cut(s) 1538, 1673
BstX2I RGATCY 4 cut(s) 877, 1287, 2289, 2830
BstXI CCANNNNNNTGG 1 cut(s) 947
BstYI RGATCY 4 cut(s) 877, 1287, 2289, 2830
BstZ17I GTATAC 1 cut(s) 2152
BsuRI GGCC 3 cut(s) 777, 831, 1085
BtgI CCRYGG 1 cut(s) 555
BtgZI GCGATG 1 cut(s) 1844
BtsCI GGATG 8 cut(s) 543, 834, 1004, 1846, 1970, 2577, 2698, 3045
BtsI GCAGTG 1 cut(s) 2049
BtsIMutI CAGTG 5 cut(s) 1544, 2049, 2255, 2745, 3090
BveI ACCTGC 1 cut(s) 2798
Cac8I GCNNGC 2 cut(s) 504, 3013
CaiI CAGNNNCTG 1 cut(s) 665
CciI TCATGA 2 cut(s) 33, 2470
CfoI GCGC 1 cut(s) 294
Cfr10I RCCGGY 1 cut(s) 536
Cfr13I GGNCC 1 cut(s) 3055
CseI GACGC 1 cut(s) 582
Csp6I GTAC 4 cut(s) 684, 805, 957, 1796
CspAI ACCGGT 1 cut(s) 536
CspCI CAANNNNNGTGG 4 cut(s) 120, 155, 1840, 1875
CviQI GTAC 4 cut(s) 684, 805, 957, 1796
DdeI CTNAG 7 cut(s) 287, 967, 1112, 1421, 1604, 2258, 3119
EaeI YGGCCR 2 cut(s) 829, 1083
Eam1104I CTCTTC 4 cut(s) 168, 1977, 2850, 2922
EarI CTCTTC 4 cut(s) 168, 1977, 2850, 2922
Eco130I CCWWGG 3 cut(s) 555, 808, 3029
Eco147I AGGCCT 1 cut(s) 777
Eco47I GGWCC 1 cut(s) 3055
Eco57I CTGAAG 3 cut(s) 1550, 1667, 1958
Eco88I CYCGRG 1 cut(s) 1784
EcoNI CCTNNNNNAGG 2 cut(s) 771, 2066
EcoRI GAATTC 1 cut(s) 1578
EcoRII CCWGG 2 cut(s) 587, 766
EcoT14I CCWWGG 3 cut(s) 555, 808, 3029
ErhI CCWWGG 3 cut(s) 555, 808, 3029
FalI AAGNNNNNCTT 4 cut(s) 1348, 1380, 2148, 2180
FaqI GGGAC 2 cut(s) 916, 1889
FauNDI CATATG 1 cut(s) 2894
FbaI TGATCA 2 cut(s) 343, 2167
FblI GTMKAC 2 cut(s) 2151, 2812
Fnu4HI GCNGC 5 cut(s) 196, 1247, 1880, 2384, 2649
FokI GGATG 8 cut(s) 530, 821, 991, 1853, 1977, 2564, 2705, 3052
Fsp4HI GCNGC 5 cut(s) 196, 1247, 1880, 2384, 2649
GlaI GCGC 1 cut(s) 293
GluI GCNGC 5 cut(s) 196, 1247, 1880, 2384, 2649
GsaI CCCAGC 1 cut(s) 865
GsuI CTGGAG 3 cut(s) 1593, 2290, 2637
HaeIII GGCC 3 cut(s) 777, 831, 1085
HapII CCGG 5 cut(s) 537, 884, 1962, 2269, 2733
HgaI GACGC 1 cut(s) 582
HhaI GCGC 1 cut(s) 294
Hin1I GRCGYC 1 cut(s) 593
Hin6I GCGC 1 cut(s) 292
HinP1I GCGC 1 cut(s) 292
HincII GTYRAC 3 cut(s) 409, 1095, 3100
HindII GTYRAC 3 cut(s) 409, 1095, 3100
HindIII AAGCTT 1 cut(s) 643
HpaII CCGG 5 cut(s) 537, 884, 1962, 2269, 2733
HphI GGTGA 6 cut(s) 252, 508, 1802, 2489, 2567, 3018
Hpy166II GTNNAC 8 cut(s) 409, 1095, 2152, 2483, 2764, 2813, 3058, 3100
Hpy8I GTNNAC 8 cut(s) 409, 1095, 2152, 2483, 2764, 2813, 3058, 3100
HpyCH4III ACNGT 5 cut(s) 432, 458, 907, 2501, 2768
HpyF10VI GCNNNNNNNGC 2 cut(s) 1492, 2804
HpyF3I CTNAG 7 cut(s) 287, 967, 1112, 1421, 1604, 2258, 3119
Hsp92I GRCGYC 1 cut(s) 593
HspAI GCGC 1 cut(s) 292
Kpn2I TCCGGA 1 cut(s) 2732
KpnI GGTACC 2 cut(s) 960, 1799
Ksp22I TGATCA 2 cut(s) 343, 2167
LmnI GCTCC 3 cut(s) 2222, 2309, 2656
Lsp1109I GCAGC 4 cut(s) 1233, 1891, 2370, 2635
LweI GCATC 4 cut(s) 214, 303, 552, 1955
MaeIII GTNAC 4 cut(s) 661, 1376, 2884, 3066
MfeI CAATTG 1 cut(s) 347
MflI RGATCY 4 cut(s) 877, 1287, 2289, 2830
MhlI GDGCHC 1 cut(s) 758
MlsI TGGCCA 2 cut(s) 831, 1085
MluNI TGGCCA 2 cut(s) 831, 1085
MlyI GAGTC 6 cut(s) 152, 351, 530, 587, 1221, 2568
MmeI TCCRAC 2 cut(s) 379, 1172
Mox20I TGGCCA 2 cut(s) 831, 1085
MroI TCCGGA 1 cut(s) 2732
MroXI GAANNNNTTC 2 cut(s) 565, 976
MscI TGGCCA 2 cut(s) 831, 1085
MslI CAYNNNNRTG 1 cut(s) 2969
Msp20I TGGCCA 2 cut(s) 831, 1085
MspCI CTTAAG 1 cut(s) 2996
MspI CCGG 5 cut(s) 537, 884, 1962, 2269, 2733
MspR9I CCNGG 2 cut(s) 589, 768
MunI CAATTG 1 cut(s) 347
Mva1269I GAATGC 2 cut(s) 1359, 2252
MvaI CCWGG 2 cut(s) 589, 768
MwoI GCNNNNNNNGC 2 cut(s) 1492, 2804
NcoI CCATGG 1 cut(s) 555
NdeI CATATG 1 cut(s) 2894
NlaIV GGNNCC 8 cut(s) 253, 330, 757, 958, 1289, 1797, 2635, 2832
NmuCI GTSAC 1 cut(s) 2884
NspI RCATGY 2 cut(s) 2301, 3015
NspV TTCGAA 1 cut(s) 1871
OliI CACNNNNGTG 1 cut(s) 2969
PaeI GCATGC 1 cut(s) 3015
PaeR7I CTCGAG 1 cut(s) 1784
PagI TCATGA 2 cut(s) 33, 2470
PasI CCCWGGG 1 cut(s) 588
PceI AGGCCT 1 cut(s) 777
PciI ACATGT 1 cut(s) 2297
PctI GAATGC 2 cut(s) 1359, 2252
PdmI GAANNNNTTC 2 cut(s) 565, 976
PinAI ACCGGT 1 cut(s) 536
PkrI GCNGC 5 cut(s) 197, 1248, 1881, 2385, 2650
PleI GAGTC 6 cut(s) 152, 351, 529, 586, 1220, 2568
PpsI GAGTC 6 cut(s) 152, 351, 529, 586, 1220, 2568
PscI ACATGT 1 cut(s) 2297
PsiI TTATAA 1 cut(s) 2904
Psp6I CCWGG 2 cut(s) 587, 766
PspFI CCCAGC 1 cut(s) 861
PspGI CCWGG 2 cut(s) 587, 766
PspN4I GGNNCC 8 cut(s) 253, 330, 757, 958, 1289, 1797, 2635, 2832
PspPI GGNCC 1 cut(s) 3055
PspXI VCTCGAGB 1 cut(s) 1784
PstI CTGCAG 1 cut(s) 2044
PstNI CAGNNNCTG 1 cut(s) 665
PsuI RGATCY 4 cut(s) 877, 1287, 2289, 2830
RsaI GTAC 4 cut(s) 685, 806, 958, 1797
RsaNI GTAC 4 cut(s) 684, 805, 957, 1796
RseI CAYNNNNRTG 1 cut(s) 2969
SatI GCNGC 5 cut(s) 196, 1247, 1880, 2384, 2649
Sau96I GGNCC 1 cut(s) 3055
SchI GAGTC 6 cut(s) 152, 351, 530, 587, 1221, 2568
ScrFI CCNGG 2 cut(s) 589, 768
SduI GDGCHC 1 cut(s) 758
SfaNI GCATC 4 cut(s) 214, 303, 552, 1955
SfcI CTRYAG 2 cut(s) 1736, 2040
Sfr274I CTCGAG 1 cut(s) 1784
SfuI TTCGAA 1 cut(s) 1871
SinI GGWCC 1 cut(s) 3055
SlaI CTCGAG 1 cut(s) 1784
SmiMI CAYNNNNRTG 1 cut(s) 2969
SmlI CTYRAG 3 cut(s) 199, 1784, 2996
SmoI CTYRAG 3 cut(s) 199, 1784, 2996
SpeI ACTAGT 1 cut(s) 1106
SphI GCATGC 1 cut(s) 3015
SseBI AGGCCT 1 cut(s) 777
SsiI CCGC 3 cut(s) 195, 361, 1503
SspI AATATT 3 cut(s) 1254, 1372, 2434
StuI AGGCCT 1 cut(s) 777
StyD4I CCNGG 2 cut(s) 587, 766
StyI CCWWGG 3 cut(s) 555, 808, 3029
TaaI ACNGT 5 cut(s) 432, 458, 907, 2501, 2768
TaqI TCGA 5 cut(s) 88, 297, 634, 1785, 1871
TauI GCSGC 1 cut(s) 198
TscAI CASTG 5 cut(s) 1551, 2049, 2262, 2752, 3097
TseFI GTSAC 1 cut(s) 2884
TseI GCWGC 4 cut(s) 1246, 1879, 2383, 2648
Tsp45I GTSAC 1 cut(s) 2884
TspGWI ACGGA 3 cut(s) 440, 1300, 2118
TspRI CASTG 5 cut(s) 1551, 2049, 2262, 2752, 3097
Vha464I CTTAAG 1 cut(s) 2996
VpaK11BI GGWCC 1 cut(s) 3055
XagI CCTNNNNNAGG 2 cut(s) 771, 2066
XapI RAATTY 7 cut(s) 104, 399, 1055, 1578, 1613, 1809, 2947
XbaI TCTAGA 3 cut(s) 931, 1690, 2851
XceI RCATGY 2 cut(s) 2301, 3015
XcmI CCANNNNNNNNNTGG 1 cut(s) 2236
XhoI CTCGAG 1 cut(s) 1784
XmiI GTMKAC 2 cut(s) 2151, 2812
XmnI GAANNNNTTC 2 cut(s) 565, 976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.