Rw1G031800
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
59975811 .. 59979466
3656 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G031800.1

Sequence Viewer

Length: 3141 bp
ATGGAGAGTTTCACATACCTTCATGTCCTGACCTTCCTCCTTTTCATCAACTTTTTACAACCCACCACTGTTGTAAGTTCATTTGGCAATGAAACCGATCGCTTGGCTTTGCTAAAATTCAAAGATTGCATAGCCTCTGATCCACATGAGCTGTTGAACTCATGGAATGACTCAATTCATTACTGCAAATGGCCTGGAATTACTTGTGGCAGACGACATCTAAGAGTAACAGGCTTGAGCCTACCACATGCTGAATTGCACGGAACCATATCACCATACATTGGCAACCTCTCCTTTCTCAGGAACTTCGACCTTTACAACAACAGCTTCTCTGGCAACATTCCTCAACAAGTTGATCATTTGTTCAGATTGCGACGTCTCAATCTACCTCTCAACAAGTTGGAGGGGGGAATTCCAGTCAATTTGACCTTCTGCTCGAAATTAAGAGCCATAAGCATTGCAATAAACCGCCTTACCGGAAAAATTCCTTCAGAGATTGGGTCGTTGAAGAAGCTTGTGGATCTTCGTCTTCAGGAAAACAATCTGACAGGAGGCATCACACCTTCCTTGGGGAATCTTTCATCGCTCACTCTACTTTCCTTAGAACACAATAATTTGGTGGGCACCGTTCCAGAGGTGCTAGGCCGATTGAGAAGCTTATCTACTTTTATAAGTAGTTTCAATAATCTCTCTGGTATGATCCCTCCCTCCCTTTTTAACATATCAGCTATCAAGATCATCTCACTTTCGGATAATAAGTTTAAGGGCAGTATTCCACTTAGGATAGGCCTAAACATGCCTAATCTCCAATTCCTGACGCTTGGTGAAAATGAATTCTCTGGACAAATCCCAGCTGCACTTTCCAACGCTTCTCAGCTTCAAGAGGTTGATTTTGGGAGAAATAATTTTACCGGGCAAGTTCCCACAAGTTTTGGAAATTTTCCTAATCTCCAGCGGCTCAGCTTCGAGATCAACAATCTAGGAACTAATTCATCAAATGATTTAGGATTTATAACATTATTGACAAATTGCAGCAATTTGAGGGGGCTTTCTGTGAGTCTGAACAATTTTGGAGGTGTTTTACCCAGCACTGTAGCCAATTTCTCAACCCAAATGACTCGACTCTACCTTGGGCTCAATCAAATAGCGGGAACGGTTCCTGAAACATTAGGAAATCTCTGCAATTTAATAATCCTGACCCTGGACGAAAACTTGTTCACAGGTACAATTCCAGCTTCTTTTGGGAAGTTACAAAAGCTGCAAATATTATATTTACATTCCAATAGATTATCAGGCCGGATCCCAGCTTCCTTAGGAAACCTCACCCAATTGTATCAACTCTACTTATTTGAAAATGAATTAGAAGGAAACATTCCTCCAAATATTGGTAACTGCGAAAATCTGCAGGTGATGGATATATCACACAATAAGCTTAGTGGAGATATACCATCACAGGTCATTGGTCTGTCCTCATTCTCTATCTTGCTCAACTTATCCCAAAACTTGTTAACTGGCATTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCAATACACTGGACATTTCTGATAATAATTTGACTGGAGGAATTCCAGAAATTATCAGAGGATGTGTGAGCCTTGAATTTCTTTACCTACAAGGGAACCACTTTCAAGGAATCATACCTTCTTCTTTTGCTGCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGAAACAACTTGTCAGGACATATTCCAAAAGACCTACAGAGACTTCCATTCTTGATCCATTTGAACCTTTCGTTCAATAATCTGGAGGGTGAGGTACCGAAAGAAAAAGTTTTTCGAAACACAAGTGCAATATCATTGGATGGAAATACCAAACTTTGTGGAGGTGTTTCAGAATTGCAGCTACCAGCATGCCCCATCAAAGTACCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAGGTACACAATTTCTTTAGTCGCTGGATGCTCTCTTCTGTTTGCAGTAATCTTTGCACTTTATTGGAGGAGAAAAAATCAAAAGAAGAAACCATTATCTGAAGTGCCATCAATCAACTTCCTTTCAAAGGTTTCATACCAGACACTTCATCAAGTTACTGGCGGATTCTCTTCAAGCAATCTAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTCTTGATCAAGAAGAAAATAACGTAGTTGCCATAAAGGTCCTCAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTTGTGGCAGAATGCACTGCACTCAAAAATGTCCGACACAGGAACCTTGTGAAAATCTTAACATGTTGCTCCAGCATAGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACCAATCAGGGAGTCTGAACCTTCTTCAAAGACTAAATATTGTTGTTGATGTGGCTTCTGCATTGTGTTATCTTCATGACCATTGCGAACCACAAATTATTCACCTTGACATGAAGCCAAGCAACGTTCTTCTTGACGATGACATGGTTGCTCGTATCAGTGATTTTGGATTGGCAAGACTCATCCCACCGACCGCACACTCCTCTGAAAATCAAAGTAGCACAGTTGGGATAAAGGGAACCATTGGCTATGCTGCTCCAGAGTACGCAGTTGGTGTGGGGCCATCAAAGCAAGGGGATGTATATAGTTATGGGATCCTTGTGTTGCAATTATTCACGGGAAGAAGACCCACTGATGAAATGTTTGTAGATGGTTGCAATATCCATACTTTTGTTAAGACGGCCATACATGGAAGACTTATGCAAATTGTAGATCCTACTCTTGTTGCCACTCTAGAAGAGACTGCAACTTCAACAACGAACAATGAAGTGACCAATATCCGTGGTTACAACAATGAAATCGAAGCTGATGAAGGCAACATTGACAATGAGAATTTAAGCACGATGAACACTTATGTGTGGAAATGCATACTTCCAACCCTTAAGATTGGACTCGCATGCTCGGAAGAATCCCCAAGGAATAGGATGTCTATGAAGGAGGTCCACAGGGAACTATACCATATAAAAAATGCTTACACTGGTGTTGACATTCCTCGAGAGAGGCCAAGAAGAAGCTAA

Protein Analysis

1046

Amino Acids

115.49

Weight (kDa)

8.26

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 3.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 73 - 355 1.6e-12 Leucine-rich repeat region
LRR_14 PF23598 376 - 450 3.4e-07 Leucine-rich repeat region
LRR_8 PF13855 395 - 454 2.3e-07 Leucine rich repeat
LRR_8 PF13855 496 - 551 1.8e-07 Leucine rich repeat
LRR_14 PF23598 505 - 601 2e-06 Leucine-rich repeat region
LRR_8 PF13855 540 - 599 2e-10 Leucine rich repeat
Pkinase PF00069 708 - 921 5.1e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 710 - 925 5.9e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 671, 1013
AarI CACCTGC 1 cut(s) 1396
AatII GACGTC 1 cut(s) 379
Acc36I ACCTGC 1 cut(s) 1396
Acc65I GGTACC 1 cut(s) 1807
AccB1I GGYRCC 2 cut(s) 623, 1807
AccB7I CCANNNNNTGG 2 cut(s) 281, 1385
AccI GTMKAC 1 cut(s) 2160
AciI CCGC 6 cut(s) 469, 955, 1148, 2112, 2145, 2598
AclI AACGTT 1 cut(s) 2529
AcoI YGGCCR 1 cut(s) 2805
AcsI RAATTY 8 cut(s) 116, 411, 483, 833, 937, 1590, 1625, 2956
AcuI CTGAAG 5 cut(s) 474, 515, 1562, 1679, 2070
AcyI GRCGYC 1 cut(s) 376
AfaI GTAC 5 cut(s) 1225, 1809, 1917, 1955, 2669
AfiI CCNNNNNNNGG 6 cut(s) 281, 300, 569, 1201, 1385, 2077
AflII CTTAAG 1 cut(s) 3005
AflIII ACRYGT 1 cut(s) 2306
AjnI CCWGG 2 cut(s) 193, 1200
AleI CACNNNNGTG 1 cut(s) 2978
Alw26I GTCTC 3 cut(s) 383, 1747, 2858
Ama87I CYCGRG 1 cut(s) 3117
AoxI GGCC 7 cut(s) 191, 643, 787, 1294, 2684, 2805, 3125
ApeKI GCWGC 7 cut(s) 854, 1032, 1258, 1679, 1891, 2392, 2657
ApoI RAATTY 8 cut(s) 116, 411, 483, 833, 937, 1590, 1625, 2956
Asp700I GAANNNNTTC 1 cut(s) 988
Asp718I GGTACC 1 cut(s) 1807
AspS9I GGNCC 3 cut(s) 2209, 2684, 3064
AsuC2I CCSGG 1 cut(s) 913
AsuHPI GGTGA 6 cut(s) 264, 836, 1315, 1420, 1814, 2498
AsuII TTCGAA 1 cut(s) 1828
AvaI CYCGRG 1 cut(s) 3117
AvaII GGWCC 2 cut(s) 2209, 3064
AxyI CCTNAGG 1 cut(s) 1312
BaeGI GKGCMC 1 cut(s) 626
BamHI GGATCC 2 cut(s) 1299, 2718
BanI GGYRCC 2 cut(s) 623, 1807
BanII GRGCYC 1 cut(s) 1137
BarI GAAGNNNNNNTAC 2 cut(s) 646, 678
BbsI GAAGAC 4 cut(s) 521, 1685, 2755, 2824
BbvI GCAGC 7 cut(s) 841, 1044, 1245, 1666, 1903, 2379, 2644
BccI CCATC 7 cut(s) 1405, 1456, 1847, 1916, 2065, 2695, 2768
BceAI ACGGC 1 cut(s) 2820
BciT130I CCWGG 2 cut(s) 195, 1202
BclI TGATCA 2 cut(s) 355, 2176
BcnI CCSGG 1 cut(s) 913
BcoDI GTCTC 3 cut(s) 383, 1747, 2858
BfaI CTAG 5 cut(s) 641, 980, 1703, 2351, 2858
BfmI CTRYAG 3 cut(s) 1092, 1403, 1748
BfrI CTTAAG 1 cut(s) 3005
BfuAI ACCTGC 1 cut(s) 1396
BglII AGATCT 1 cut(s) 1705
BisI GCNGC 8 cut(s) 855, 956, 1033, 1259, 1680, 1892, 2393, 2658
BlpI GCTNAGC 1 cut(s) 959
BlsI GCNGC 8 cut(s) 856, 957, 1034, 1260, 1681, 1893, 2394, 2659
Bme1390I CCNGG 3 cut(s) 195, 913, 1202
Bme18I GGWCC 2 cut(s) 2209, 3064
BmeT110I CYCGRG 1 cut(s) 3117
BmgT120I GGNCC 3 cut(s) 2209, 2684, 3064
BmrFI CCNGG 3 cut(s) 195, 913, 1202
BmsI GCATC 2 cut(s) 564, 1967
BpiI GAAGAC 4 cut(s) 521, 1685, 2755, 2824
BpmI CTGGAG 5 cut(s) 935, 1605, 1817, 2299, 2646
Bpu1102I GCTNAGC 1 cut(s) 959
Bpu14I TTCGAA 1 cut(s) 1828
BpuEI CTTGAG 1 cut(s) 256
BpuMI CCSGG 1 cut(s) 913
BsaHI GRCGYC 1 cut(s) 376
BsaJI CCNNGG 5 cut(s) 567, 1129, 1200, 2905, 3038
BsaWI WCCGGW 1 cut(s) 476
Bsc4I CCNNNNNNNGG 6 cut(s) 281, 300, 569, 1201, 1385, 2077
Bse1I ACTGG 6 cut(s) 416, 1516, 1563, 1588, 2113, 3106
Bse21I CCTNAGG 1 cut(s) 1312
Bse3DI GCAATG 3 cut(s) 94, 456, 2485
BseBI CCWGG 2 cut(s) 195, 1202
BseDI CCNNGG 5 cut(s) 567, 1129, 1200, 2905, 3038
BseGI GGATG 6 cut(s) 1616, 1858, 1982, 2586, 2707, 3054
BseLI CCNNNNNNNGG 6 cut(s) 281, 300, 569, 1201, 1385, 2077
BseMI GCAATG 3 cut(s) 94, 456, 2485
BseMII CTCAG 3 cut(s) 313, 887, 973
BseNI ACTGG 6 cut(s) 416, 1516, 1563, 1588, 2113, 3106
BseRI GAGGAG 3 cut(s) 2032, 2399, 2596
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 7 cut(s) 841, 1044, 1245, 1666, 1903, 2379, 2644
BseYI CCCAGC 3 cut(s) 850, 1085, 1303
BsgI GTGCAG 3 cut(s) 840, 2247, 2378
Bsh1285I CGRYCG 2 cut(s) 100, 2598
BshFI GGCC 7 cut(s) 193, 645, 789, 1296, 2686, 2807, 3127
BshNI GGYRCC 2 cut(s) 623, 1807
BsiEI CGRYCG 2 cut(s) 100, 2598
BsiHKCI CYCGRG 1 cut(s) 3117
BsiSI CCGG 3 cut(s) 477, 912, 1297
BslI CCNNNNNNNGG 6 cut(s) 281, 300, 569, 1201, 1385, 2077
BsmAI GTCTC 3 cut(s) 383, 1747, 2858
BsmBI CGTCTC 1 cut(s) 383
BsmI GAATGC 2 cut(s) 1515, 2261
BsnI GGCC 7 cut(s) 193, 645, 789, 1296, 2686, 2807, 3127
BsoBI CYCGRG 1 cut(s) 3117
Bsp119I TTCGAA 1 cut(s) 1828
Bsp1286I GDGCHC 2 cut(s) 626, 1137
Bsp1720I GCTNAGC 1 cut(s) 959
BspACI CCGC 6 cut(s) 469, 955, 1148, 2112, 2145, 2598
BspANI GGCC 7 cut(s) 193, 645, 789, 1296, 2686, 2807, 3127
BspCNI CTCAG 3 cut(s) 312, 886, 972
BspHI TCATGA 1 cut(s) 2479
BspMAI CTGCAG 1 cut(s) 1407
BspMI ACCTGC 1 cut(s) 1396
BspT104I TTCGAA 1 cut(s) 1828
BspT107I GGYRCC 2 cut(s) 623, 1807
BspTI CTTAAG 1 cut(s) 3005
BsrDI GCAATG 3 cut(s) 94, 456, 2485
BsrI ACTGG 6 cut(s) 416, 1516, 1563, 1588, 2113, 3106
BssECI CCNNGG 5 cut(s) 567, 1129, 1200, 2905, 3038
BssNAI GTATAC 1 cut(s) 2161
BssNI GRCGYC 1 cut(s) 376
BssT1I CCWWGG 3 cut(s) 567, 1129, 3038
Bst1107I GTATAC 1 cut(s) 2161
Bst2UI CCWGG 2 cut(s) 195, 1202
Bst4CI ACNGT 5 cut(s) 70, 628, 1093, 1156, 2629
Bst6I CTCTTC 3 cut(s) 1989, 2125, 2856
BstACI GRCGYC 1 cut(s) 376
BstAFI CTTAAG 1 cut(s) 3005
BstBI TTCGAA 1 cut(s) 1828
BstC8I GCNNGC 2 cut(s) 1903, 3022
BstDEI CTNAG 9 cut(s) 221, 299, 601, 779, 873, 959, 1312, 1433, 1949
BstDSI CCRYGG 1 cut(s) 2905
BstENI CCTNNNNNAGG 2 cut(s) 298, 2075
BstF5I GGATG 6 cut(s) 1616, 1858, 1982, 2586, 2707, 3054
BstMAI GTCTC 3 cut(s) 383, 1747, 2858
BstMCI CGRYCG 2 cut(s) 100, 2598
BstMWI GCNNNNNNNGC 3 cut(s) 333, 2151, 2692
BstNI CCWGG 2 cut(s) 195, 1202
BstNSI RCATGY 5 cut(s) 251, 799, 1905, 2310, 3024
BstSCI CCNGG 3 cut(s) 193, 911, 1200
BstSFI CTRYAG 3 cut(s) 1092, 1403, 1748
BstSLI GKGCMC 1 cut(s) 626
BstV1I GCAGC 7 cut(s) 841, 1044, 1245, 1666, 1903, 2379, 2644
BstV2I GAAGAC 4 cut(s) 521, 1685, 2755, 2824
BstX2I RGATCY 5 cut(s) 520, 1299, 1705, 2718, 2836
BstYI RGATCY 5 cut(s) 520, 1299, 1705, 2718, 2836
BstZ17I GTATAC 1 cut(s) 2161
Bsu36I CCTNAGG 1 cut(s) 1312
BsuRI GGCC 7 cut(s) 193, 645, 789, 1296, 2686, 2807, 3127
BtgI CCRYGG 1 cut(s) 2905
BtgZI GCGATG 1 cut(s) 567
BtsCI GGATG 6 cut(s) 1616, 1858, 1982, 2586, 2707, 3054
BtsI GCAGTG 1 cut(s) 2259
BtsIMutI CAGTG 7 cut(s) 66, 1089, 1556, 2259, 2569, 2754, 3099
BveI ACCTGC 1 cut(s) 1396
Cac8I GCNNGC 2 cut(s) 1903, 3022
CciI TCATGA 1 cut(s) 2479
Cfr13I GGNCC 3 cut(s) 2209, 2684, 3064
CseI GACGC 1 cut(s) 826
Csp6I GTAC 5 cut(s) 1224, 1808, 1916, 1954, 2668
CspCI CAANNNNNGTGG 8 cut(s) 52, 87, 913, 948, 1852, 1887, 2887, 2922
CviQI GTAC 5 cut(s) 1224, 1808, 1916, 1954, 2668
DdeI CTNAG 9 cut(s) 221, 299, 601, 779, 873, 959, 1312, 1433, 1949
EaeI YGGCCR 1 cut(s) 2805
Eam1104I CTCTTC 3 cut(s) 1989, 2125, 2856
EarI CTCTTC 3 cut(s) 1989, 2125, 2856
EciI GGCGGA 1 cut(s) 2127
Eco130I CCWWGG 3 cut(s) 567, 1129, 3038
Eco147I AGGCCT 1 cut(s) 789
Eco24I GRGCYC 1 cut(s) 1137
Eco47I GGWCC 2 cut(s) 2209, 3064
Eco57I CTGAAG 5 cut(s) 474, 515, 1562, 1679, 2070
Eco81I CCTNAGG 1 cut(s) 1312
Eco88I CYCGRG 1 cut(s) 3117
EcoNI CCTNNNNNAGG 2 cut(s) 298, 2075
EcoO109I RGGNCCY 1 cut(s) 2209
EcoRI GAATTC 3 cut(s) 411, 833, 1590
EcoRII CCWGG 2 cut(s) 193, 1200
EcoT14I CCWWGG 3 cut(s) 567, 1129, 3038
EcoT22I ATGCAT 1 cut(s) 2993
EcoT38I GRGCYC 1 cut(s) 1137
ErhI CCWWGG 3 cut(s) 567, 1129, 3038
Esp3I CGTCTC 1 cut(s) 383
FalI AAGNNNNNCTT 2 cut(s) 2157, 2189
FauI CCCGC 1 cut(s) 1141
FbaI TGATCA 2 cut(s) 355, 2176
FblI GTMKAC 1 cut(s) 2160
Fnu4HI GCNGC 8 cut(s) 855, 956, 1033, 1259, 1680, 1892, 2393, 2658
FokI GGATG 6 cut(s) 1623, 1865, 1989, 2573, 2714, 3061
FriOI GRGCYC 1 cut(s) 1137
Fsp4HI GCNGC 8 cut(s) 855, 956, 1033, 1259, 1680, 1892, 2393, 2658
FspBI CTAG 5 cut(s) 641, 980, 1703, 2351, 2858
GluI GCNGC 8 cut(s) 855, 956, 1033, 1259, 1680, 1892, 2393, 2658
GsaI CCCAGC 3 cut(s) 854, 1089, 1307
GsuI CTGGAG 5 cut(s) 935, 1605, 1817, 2299, 2646
HaeIII GGCC 7 cut(s) 193, 645, 789, 1296, 2686, 2807, 3127
HapII CCGG 3 cut(s) 477, 912, 1297
HgaI GACGC 1 cut(s) 826
Hin1I GRCGYC 1 cut(s) 376
HincII GTYRAC 2 cut(s) 1509, 3109
HindII GTYRAC 2 cut(s) 1509, 3109
HindIII AAGCTT 3 cut(s) 512, 655, 1430
HpaI GTTAAC 1 cut(s) 1509
HpaII CCGG 3 cut(s) 477, 912, 1297
HphI GGTGA 6 cut(s) 264, 836, 1315, 1420, 1814, 2498
Hpy166II GTNNAC 6 cut(s) 1218, 1509, 1956, 2161, 3067, 3109
Hpy8I GTNNAC 6 cut(s) 1218, 1509, 1956, 2161, 3067, 3109
Hpy99I CGWCG 1 cut(s) 378
HpyCH4III ACNGT 5 cut(s) 70, 628, 1093, 1156, 2629
HpyCH4IV ACGT 3 cut(s) 376, 2193, 2529
HpyF10VI GCNNNNNNNGC 3 cut(s) 333, 2151, 2692
HpyF3I CTNAG 9 cut(s) 221, 299, 601, 779, 873, 959, 1312, 1433, 1949
HpySE526I ACGT 3 cut(s) 376, 2193, 2529
Hsp92I GRCGYC 1 cut(s) 376
KpnI GGTACC 1 cut(s) 1811
Ksp22I TGATCA 2 cut(s) 355, 2176
KspAI GTTAAC 1 cut(s) 1509
LmnI GCTCC 3 cut(s) 2231, 2318, 2665
Lsp1109I GCAGC 7 cut(s) 841, 1044, 1245, 1666, 1903, 2379, 2644
LweI GCATC 2 cut(s) 564, 1967
MaeI CTAG 5 cut(s) 641, 980, 1703, 2351, 2858
MaeII ACGT 3 cut(s) 376, 2193, 2529
MaeIII GTNAC 6 cut(s) 226, 1248, 1388, 2104, 2893, 2909
MfeI CAATTG 1 cut(s) 1328
MflI RGATCY 5 cut(s) 520, 1299, 1705, 2718, 2836
MhlI GDGCHC 2 cut(s) 626, 1137
MlyI GAGTC 7 cut(s) 164, 1066, 1111, 1116, 2425, 2577, 3009
MmeI TCCRAC 4 cut(s) 381, 888, 2302, 3023
Mph1103I ATGCAT 1 cut(s) 2993
MroXI GAANNNNTTC 1 cut(s) 988
MseI TTAA 9 cut(s) 443, 717, 762, 1187, 1508, 2303, 2799, 2960, 3006
MslI CAYNNNNRTG 1 cut(s) 2978
MspA1I CMGCKG 2 cut(s) 854, 955
MspCI CTTAAG 1 cut(s) 3005
MspI CCGG 3 cut(s) 477, 912, 1297
MspR9I CCNGG 3 cut(s) 195, 913, 1202
MunI CAATTG 1 cut(s) 1328
Mva1269I GAATGC 2 cut(s) 1515, 2261
MvaI CCWGG 2 cut(s) 195, 1202
MwoI GCNNNNNNNGC 3 cut(s) 333, 2151, 2692
NciI CCSGG 1 cut(s) 913
NmuCI GTSAC 1 cut(s) 2893
NsiI ATGCAT 1 cut(s) 2993
NspI RCATGY 5 cut(s) 251, 799, 1905, 2310, 3024
NspV TTCGAA 1 cut(s) 1828
OliI CACNNNNGTG 1 cut(s) 2978
PaeI GCATGC 2 cut(s) 1905, 3024
PaeR7I CTCGAG 1 cut(s) 3117
PagI TCATGA 1 cut(s) 2479
PaqCI CACCTGC 1 cut(s) 1396
PceI AGGCCT 1 cut(s) 789
PciI ACATGT 1 cut(s) 2306
PctI GAATGC 2 cut(s) 1515, 2261
PdmI GAANNNNTTC 1 cut(s) 988
PfeI GAWTC 5 cut(s) 574, 1659, 2115, 2170, 3032
PflMI CCANNNNNTGG 2 cut(s) 281, 1385
PkrI GCNGC 8 cut(s) 856, 957, 1034, 1260, 1681, 1893, 2394, 2659
Ple19I CGATCG 1 cut(s) 100
PleI GAGTC 7 cut(s) 164, 1065, 1111, 1116, 2424, 2577, 3009
PpsI GAGTC 7 cut(s) 164, 1065, 1111, 1116, 2424, 2577, 3009
PpuMI RGGWCCY 1 cut(s) 2209
PscI ACATGT 1 cut(s) 2306
PsiI TTATAA 2 cut(s) 671, 1013
Psp1406I AACGTT 1 cut(s) 2529
Psp5II RGGWCCY 1 cut(s) 2209
Psp6I CCWGG 2 cut(s) 193, 1200
PspFI CCCAGC 3 cut(s) 850, 1085, 1303
PspGI CCWGG 2 cut(s) 193, 1200
PspPI GGNCC 3 cut(s) 2209, 2684, 3064
PspPPI RGGWCCY 1 cut(s) 2209
PstI CTGCAG 1 cut(s) 1407
PsuI RGATCY 5 cut(s) 520, 1299, 1705, 2718, 2836
PvuI CGATCG 1 cut(s) 100
PvuII CAGCTG 1 cut(s) 854
RsaI GTAC 5 cut(s) 1225, 1809, 1917, 1955, 2669
RsaNI GTAC 5 cut(s) 1224, 1808, 1916, 1954, 2668
RseI CAYNNNNRTG 1 cut(s) 2978
SaqAI TTAA 9 cut(s) 443, 717, 762, 1187, 1508, 2303, 2799, 2960, 3006
SatI GCNGC 8 cut(s) 855, 956, 1033, 1259, 1680, 1892, 2393, 2658
Sau96I GGNCC 3 cut(s) 2209, 2684, 3064
SchI GAGTC 7 cut(s) 164, 1066, 1111, 1116, 2425, 2577, 3009
ScrFI CCNGG 3 cut(s) 195, 913, 1202
SduI GDGCHC 2 cut(s) 626, 1137
SfaNI GCATC 2 cut(s) 564, 1967
SfcI CTRYAG 3 cut(s) 1092, 1403, 1748
Sfr274I CTCGAG 1 cut(s) 3117
SfuI TTCGAA 1 cut(s) 1828
SinI GGWCC 2 cut(s) 2209, 3064
SlaI CTCGAG 1 cut(s) 3117
SmiMI CAYNNNNRTG 1 cut(s) 2978
SmlI CTYRAG 3 cut(s) 235, 3005, 3117
SmoI CTYRAG 3 cut(s) 235, 3005, 3117
SphI GCATGC 2 cut(s) 1905, 3024
SseBI AGGCCT 1 cut(s) 789
SsiI CCGC 6 cut(s) 469, 955, 1148, 2112, 2145, 2598
SspI AATATT 3 cut(s) 1266, 1384, 2443
SspMI CTAG 5 cut(s) 641, 980, 1703, 2351, 2858
StuI AGGCCT 1 cut(s) 789
StyD4I CCNGG 3 cut(s) 193, 911, 1200
StyI CCWWGG 3 cut(s) 567, 1129, 3038
TaaI ACNGT 5 cut(s) 70, 628, 1093, 1156, 2629
TaiI ACGT 3 cut(s) 379, 2196, 2532
TaqI TCGA 7 cut(s) 309, 437, 966, 1120, 1828, 2925, 3118
TauI GCSGC 1 cut(s) 958
TfiI GAWTC 5 cut(s) 574, 1659, 2115, 2170, 3032
Tru1I TTAA 9 cut(s) 443, 717, 762, 1187, 1508, 2303, 2799, 2960, 3006
Tru9I TTAA 9 cut(s) 443, 717, 762, 1187, 1508, 2303, 2799, 2960, 3006
TscAI CASTG 7 cut(s) 73, 1096, 1563, 2266, 2569, 2761, 3106
TseFI GTSAC 1 cut(s) 2893
TseI GCWGC 7 cut(s) 854, 1032, 1258, 1679, 1891, 2392, 2657
Tsp45I GTSAC 1 cut(s) 2893
TspGWI ACGGA 2 cut(s) 276, 2894
TspRI CASTG 7 cut(s) 73, 1096, 1563, 2266, 2569, 2761, 3106
Van91I CCANNNNNTGG 2 cut(s) 281, 1385
Vha464I CTTAAG 1 cut(s) 3005
VpaK11BI GGWCC 2 cut(s) 2209, 3064
XagI CCTNNNNNAGG 2 cut(s) 298, 2075
XapI RAATTY 8 cut(s) 116, 411, 483, 833, 937, 1590, 1625, 2956
XbaI TCTAGA 2 cut(s) 1702, 2857
XceI RCATGY 5 cut(s) 251, 799, 1905, 2310, 3024
XcmI CCANNNNNNNNNTGG 1 cut(s) 2245
XhoI CTCGAG 1 cut(s) 3117
XmiI GTMKAC 1 cut(s) 2160
XmnI GAANNNNTTC 1 cut(s) 988
XspI CTAG 5 cut(s) 641, 980, 1703, 2351, 2858
ZraI GACGTC 1 cut(s) 377
Zsp2I ATGCAT 1 cut(s) 2993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.