Rmu_sc0002147.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002147.1
Physical Location & Seq
Forward (+)
1 .. 473
473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002147.1_g000001.1.cds

Sequence Viewer

Length: 473 bp
atgcgagtggtgttgagccatcaagacaaggggatgtatatagttatggggtgcttgtgttgcaattgttcacgggaagaaaacctattgatgaaatgtttaaagagggtttgaacctccataactttgtcaagatggccataccagaaagagtgatgcagattgtagatcctagtcttttggccactttagaagagacagcacctgcaacatctcaaaatatagtgaactacattagtagttacaataatgaaatagaagccgtagaagaaaacattgacaatgagaatttaagcaagatgaacgcttatgtgtggaagtgcatacttccaacccttaagattggacttgcatgctcggaagaatcaccaaggaatagaatgtctatggaagaggtccacaggaagctacaccatataaaagatgcttacactggtgttgacatctgtcaggaaaggccaagaagaagctga

Protein Analysis

156

Amino Acids

17.73

Weight (kDa)

5.41

Isoelectric Point (pI)

62.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 213
Acc36I ACCTGC 1 cut(s) 213
AclWI GGATC 1 cut(s) 163
AcoI YGGCCR 2 cut(s) 137, 182
AcsI RAATTY 1 cut(s) 288
AflII CTTAAG 1 cut(s) 337
AgsI TTSAA 1 cut(s) 114
AluBI AGCT 2 cut(s) 408, 470
AluI AGCT 2 cut(s) 408, 470
Alw26I GTCTC 1 cut(s) 190
AlwI GGATC 1 cut(s) 163
AlwNI CAGNNNCTG 1 cut(s) 205
AoxI GGCC 3 cut(s) 137, 182, 457
ApoI RAATTY 1 cut(s) 288
AspS9I GGNCC 1 cut(s) 396
AsuHPI GGTGA 1 cut(s) 359
AvaII GGWCC 1 cut(s) 396
BalI TGGCCA 2 cut(s) 139, 184
BccI CCATC 2 cut(s) 27, 129
BceAI ACGGC 1 cut(s) 247
BcoDI GTCTC 1 cut(s) 190
BfaI CTAG 1 cut(s) 173
BfrI CTTAAG 1 cut(s) 337
BfuAI ACCTGC 1 cut(s) 213
Bme18I GGWCC 1 cut(s) 396
BmgT120I GGNCC 1 cut(s) 396
BmsI GCATC 2 cut(s) 146, 414
BoxI GACNNNNGTC 1 cut(s) 446
BsaJI CCNNGG 1 cut(s) 370
Bse1I ACTGG 1 cut(s) 438
BseDI CCNNGG 1 cut(s) 370
BseGI GGATG 1 cut(s) 39
BseNI ACTGG 1 cut(s) 438
BshFI GGCC 3 cut(s) 139, 184, 459
BsmAI GTCTC 1 cut(s) 190
BsnI GGCC 3 cut(s) 139, 184, 459
Bsp143I GATC 1 cut(s) 168
BspANI GGCC 3 cut(s) 139, 184, 459
BspMI ACCTGC 1 cut(s) 213
BspPI GGATC 1 cut(s) 163
BspTI CTTAAG 1 cut(s) 337
BsrI ACTGG 1 cut(s) 438
BssECI CCNNGG 1 cut(s) 370
BssMI GATC 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 370
Bst6I CTCTTC 2 cut(s) 188, 386
BstAFI CTTAAG 1 cut(s) 337
BstC8I GCNNGC 1 cut(s) 354
BstF5I GGATG 1 cut(s) 39
BstKTI GATC 1 cut(s) 171
BstMAI GTCTC 1 cut(s) 190
BstMBI GATC 1 cut(s) 168
BstMWI GCNNNNNNNGC 1 cut(s) 60
BstNSI RCATGY 1 cut(s) 356
BstPAI GACNNNNGTC 1 cut(s) 446
BstX2I RGATCY 1 cut(s) 168
BstYI RGATCY 1 cut(s) 168
BsuRI GGCC 3 cut(s) 139, 184, 459
BtsCI GGATG 1 cut(s) 39
BtsIMutI CAGTG 1 cut(s) 431
BveI ACCTGC 1 cut(s) 213
Cac8I GCNNGC 1 cut(s) 354
CaiI CAGNNNCTG 1 cut(s) 205
Cfr13I GGNCC 1 cut(s) 396
CviAII CATG 1 cut(s) 353
CviJI RGCY 7 cut(s) 18, 139, 184, 262, 408, 459, 470
CviKI_1 RGCY 7 cut(s) 18, 139, 184, 262, 408, 459, 470
DpnI GATC 1 cut(s) 170
DpnII GATC 1 cut(s) 168
DraI TTTAAA 1 cut(s) 102
EaeI YGGCCR 2 cut(s) 137, 182
Eam1104I CTCTTC 2 cut(s) 188, 386
EarI CTCTTC 2 cut(s) 188, 386
Eco130I CCWWGG 1 cut(s) 370
Eco47I GGWCC 1 cut(s) 396
EcoT14I CCWWGG 1 cut(s) 370
ErhI CCWWGG 1 cut(s) 370
FaeI CATG 1 cut(s) 356
FatI CATG 1 cut(s) 352
FokI GGATG 1 cut(s) 46
FspBI CTAG 1 cut(s) 173
HaeIII GGCC 3 cut(s) 139, 184, 459
Hin1II CATG 1 cut(s) 356
HincII GTYRAC 1 cut(s) 441
HindII GTYRAC 1 cut(s) 441
HinfI GANTC 1 cut(s) 364
HphI GGTGA 1 cut(s) 359
Hpy166II GTNNAC 4 cut(s) 71, 228, 399, 441
Hpy188I TCNGA 1 cut(s) 360
Hpy188III TCNNGA 3 cut(s) 23, 132, 451
Hpy8I GTNNAC 4 cut(s) 71, 228, 399, 441
HpyCH4V TGCA 5 cut(s) 63, 159, 208, 323, 352
HpyF10VI GCNNNNNNNGC 1 cut(s) 60
Hsp92II CATG 1 cut(s) 356
Kzo9I GATC 1 cut(s) 168
LpnPI CCDG 5 cut(s) 158, 218, 387, 419, 436
LweI GCATC 2 cut(s) 146, 414
MaeI CTAG 1 cut(s) 173
MaeIII GTNAC 1 cut(s) 241
MalI GATC 1 cut(s) 170
MboI GATC 1 cut(s) 168
MboII GAAGA 5 cut(s) 89, 205, 280, 373, 403
MfeI CAATTG 1 cut(s) 64
MflI RGATCY 1 cut(s) 168
MlsI TGGCCA 2 cut(s) 139, 184
MluCI AATT 2 cut(s) 64, 288
MluNI TGGCCA 2 cut(s) 139, 184
MmeI TCCRAC 1 cut(s) 355
MnlI CCTC 3 cut(s) 99, 127, 387
Mox20I TGGCCA 2 cut(s) 139, 184
MscI TGGCCA 2 cut(s) 139, 184
MseI TTAA 3 cut(s) 101, 292, 338
Msp20I TGGCCA 2 cut(s) 139, 184
MspCI CTTAAG 1 cut(s) 337
MunI CAATTG 1 cut(s) 64
MwoI GCNNNNNNNGC 1 cut(s) 60
NdeII GATC 1 cut(s) 168
NlaIII CATG 1 cut(s) 356
NspI RCATGY 1 cut(s) 356
PaeI GCATGC 1 cut(s) 356
PaqCI CACCTGC 1 cut(s) 213
PfeI GAWTC 1 cut(s) 364
PshAI GACNNNNGTC 1 cut(s) 446
PspPI GGNCC 1 cut(s) 396
PstNI CAGNNNCTG 1 cut(s) 205
PsuI RGATCY 1 cut(s) 168
SaqAI TTAA 3 cut(s) 101, 292, 338
Sau3AI GATC 1 cut(s) 168
Sau96I GGNCC 1 cut(s) 396
SetI ASST 6 cut(s) 87, 119, 207, 398, 410, 472
SfaNI GCATC 2 cut(s) 146, 414
SinI GGWCC 1 cut(s) 396
SmlI CTYRAG 1 cut(s) 337
SmoI CTYRAG 1 cut(s) 337
SphI GCATGC 1 cut(s) 356
Sse9I AATT 2 cut(s) 64, 288
SspMI CTAG 1 cut(s) 173
StyI CCWWGG 1 cut(s) 370
TasI AATT 2 cut(s) 64, 288
TfiI GAWTC 1 cut(s) 364
Tru1I TTAA 3 cut(s) 101, 292, 338
Tru9I TTAA 3 cut(s) 101, 292, 338
TscAI CASTG 1 cut(s) 438
TspDTI ATGAA 3 cut(s) 107, 266, 316
TspRI CASTG 1 cut(s) 438
Vha464I CTTAAG 1 cut(s) 337
VpaK11BI GGWCC 1 cut(s) 396
XapI RAATTY 1 cut(s) 288
XceI RCATGY 1 cut(s) 356
XspI CTAG 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.