Rroxscaffold_3G00232610
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
18266482 .. 18268391
1910 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00232610.1

Sequence Viewer

Length: 1872 bp
ATGGAGCTTCATATGCTCAACTTCTGTGCATTTCGGTCTACCTACCTTCATGTCATGACCACCCTTTTCCTTCTCACCAACCTTTTCCAACCTACCATCTTTGCAAATGCATTGAGCAATGAAACCGATAACTTGGCTTTGCTGAAATTCAAAGATTGCATAGCCTCTGATCCAGATGGGCTGTTGAACTCATGGAATGACTCCGTTCACTTCTGCAAATGGCAAGGAATTACTTGTGGCAAATGGCATCAAAGAGTAATAGCCTTGAACCTACCAGAAGCTATTTTGCACGGAACCATATCCCCTTACATTGGCAACCTCTCCTTTCTTAGGTTCATCAACCTTGAAAACAACAGCTTCTCTAGCAAGATTCTGCAACAATATCAACATGTTGAAGGGGGAATTCCAGTCAACCTGACCTTCTGTGTGGAACTGAGCATCTTAAGTATTGGAGAAAACCGCCTTACCGGCAAAATTCCATCAGAGATTGGGTCATTGAGGAAGCTTGTGCATCTCAATCTACAGAAAAACAATCTGACGGGACCCATCCCACCTTCCTTGGGAAATCTTTCATCAATCACACAGCTGAGCTTCACATATAACAATTTAGTGGGAACAATTTCGGAGGAGATAGGCCGATTGAAAAGATTATCAATTTTTTCAATTGGTCCTAATAATCTCTCAGGTTTGATCCCTCCCTCCCTTTTTAACATATCATCTATGATCGTCTTCTCAATTTCAGAAAATAAGTTTAAGGGCAGTATTCCACCTGGTATAGGCCTAAACATGCCTAATCTCCAAGTATTATACCTCAGCGGAAATGAATTCTCTGGGAAAATCCCGGCCTCATTTTCTAATGCTTCTAAGCTTCAAAGGCTTGATGTTATGGATAATAATTTTTTTGGGCAATTTCCTACAACTTTTGGAAATTTTCCTAATCTCTGGTGGCTCGGCTTAGGCTACAATAATCTAGGAAGTAATTCATCAAATGATTTGGGATTTATAACATCCTTGACAAATTGCAGCAATCTGGAGATATTTTCTCCCAGTTCTAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAATTTCTCAACCCAACTGACTAAACTCTACCTTGGGGCCAATCAAATAGCGGGAACGATTCCTGAAACATTAGGAAATCTGAACAATTTAATACTCCTGACCTTGGCTGAAAACTTGTTCACAGGTACCATTCCAGCTTCTTTAGGGAAGTTACAAAAGCTGCAAATATTAGGTTTACAGTCCACTAGATTATCAGGCCGGATCCCCTCTTCCTTAGGAAATCTCACCCAATTGTCTGAACTCGGTATGTTTGAAAATGAATTAGAAGGAAGCATTCCTCCAAGTATTGGTAACTGCAAAAGTCTGCAGCAGATGGATATATCAGACAATAAGCTTAGTGGAGATATACCATCACAGGTCATTAGTCTGTCCTCCTTTCTCTTACTCAATTTATCGCAAAACTCGCTCACTGGCATTCTGCCTGTGGAAGTGGGTAAGCTGAAGAATATCATTGCACTGGACATCTCTTATAATAATTTAACTGGAGGAATTCCAGAAATTATTGGAGGCTGTCAGAGCCTTGAATATCTTGACCTACAAGGGAACCACTTTCAAGGAATCATACCTTCTTCTTTGGCTACTTTGAGAGGTCTTCAGTTTTTAGATCTTTCGTGGAACAACTTGTCAAGCCAAATTCCAAAAGATCTACAAAGACTTTCATTCTTGATATATTTGGACCTTTCGTCCAATAATCTAGAGGGTGAGGTACCGAAAGAAGGAGTCTTTCAAAACACAAGTGCAATATCATTAGATGGAAATACAAAACTTAGTGGTGGTGTTTAG

Protein Analysis

623

Amino Acids

67.78

Weight (kDa)

5.69

Isoelectric Point (pI)

31.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 2.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 97 - 222 9.8e-08 Leucine-rich repeat region
LRR_8 PF13855 245 - 300 2.2e-07 Leucine rich repeat
LRR_8 PF13855 265 - 324 2.1e-06 Leucine rich repeat
LRR_8 PF13855 368 - 427 2e-07 Leucine rich repeat
LRR_14 PF23598 373 - 447 1.4e-06 Leucine-rich repeat region
LRR_8 PF13855 516 - 571 4.2e-09 Leucine rich repeat
LRR_8 PF13855 536 - 595 8.4e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1004, 1560
Acc65I GGTACC 2 cut(s) 1214, 1795
AccB1I GGYRCC 2 cut(s) 1214, 1795
AccB7I CCANNNNNTGG 1 cut(s) 1376
AccI GTMKAC 1 cut(s) 38
AciI CCGC 3 cut(s) 460, 816, 1139
AclWI GGATC 4 cut(s) 164, 685, 1285, 1298
AcsI RAATTY 7 cut(s) 146, 402, 474, 824, 928, 1578, 1722
AcuI CTGAAG 2 cut(s) 1550, 1667
AfaI GTAC 2 cut(s) 1216, 1797
AfiI CCNNNNNNNGG 7 cut(s) 311, 330, 560, 776, 1192, 1376, 1805
AflII CTTAAG 1 cut(s) 442
AflIII ACRYGT 1 cut(s) 388
AhdI GACNNNNNGTC 1 cut(s) 1771
AjnI CCWGG 1 cut(s) 769
AlwI GGATC 4 cut(s) 164, 685, 1285, 1298
AoxI GGCC 5 cut(s) 634, 778, 843, 1125, 1285
ApeKI GCWGC 3 cut(s) 1023, 1249, 1396
ApoI RAATTY 7 cut(s) 146, 402, 474, 824, 928, 1578, 1722
Asp700I GAANNNNTTC 3 cut(s) 568, 619, 979
Asp718I GGTACC 2 cut(s) 1214, 1795
AspS9I GGNCC 4 cut(s) 542, 668, 1125, 1765
AsuC2I CCSGG 1 cut(s) 842
AsuHPI GGTGA 3 cut(s) 67, 1306, 1802
AvaII GGWCC 3 cut(s) 542, 668, 1765
AxyI CCTNAGG 1 cut(s) 1303
BamHI GGATCC 1 cut(s) 1290
BanI GGYRCC 2 cut(s) 1214, 1795
BbsI GAAGAC 2 cut(s) 721, 1673
BbvCI CCTCAGC 1 cut(s) 812
BbvI GCAGC 3 cut(s) 1035, 1236, 1408
BccI CCATC 7 cut(s) 104, 170, 487, 554, 1396, 1447, 1835
BciT130I CCWGG 1 cut(s) 771
BcnI CCSGG 1 cut(s) 842
BfaI CTAG 4 cut(s) 363, 971, 1275, 1784
BfmI CTRYAG 3 cut(s) 521, 1083, 1394
BfrI CTTAAG 1 cut(s) 442
BglI GCCNNNNNGGC 1 cut(s) 468
BglII AGATCT 2 cut(s) 1693, 1732
BisI GCNGC 3 cut(s) 1024, 1250, 1397
BlpI GCTNAGC 1 cut(s) 587
BlsI GCNGC 3 cut(s) 1025, 1251, 1398
Bme1390I CCNGG 2 cut(s) 771, 842
Bme18I GGWCC 3 cut(s) 542, 668, 1765
BmeRI GACNNNNNGTC 1 cut(s) 1771
BmgT120I GGNCC 4 cut(s) 542, 668, 1125, 1765
BmiI GGNNCC 8 cut(s) 295, 543, 544, 1126, 1216, 1292, 1634, 1797
BmrFI CCNGG 2 cut(s) 771, 842
BmrI ACTGGG 1 cut(s) 1041
BmsI GCATC 3 cut(s) 256, 447, 520
BmuI ACTGGG 1 cut(s) 1041
BpiI GAAGAC 2 cut(s) 721, 1673
BpmI CTGGAG 2 cut(s) 1052, 1593
Bpu10I CCTNAGC 2 cut(s) 812, 955
Bpu1102I GCTNAGC 1 cut(s) 587
BpuMI CCSGG 1 cut(s) 842
BsaJI CCNNGG 3 cut(s) 558, 1120, 1191
Bsc4I CCNNNNNNNGG 7 cut(s) 311, 330, 560, 776, 1192, 1376, 1805
Bse118I RCCGGY 1 cut(s) 467
Bse1I ACTGG 5 cut(s) 407, 1047, 1504, 1551, 1576
Bse21I CCTNAGG 1 cut(s) 1303
Bse3DI GCAATG 2 cut(s) 124, 1539
BseBI CCWGG 1 cut(s) 771
BseDI CCNNGG 3 cut(s) 558, 1120, 1191
BseGI GGATG 2 cut(s) 546, 1007
BseLI CCNNNNNNNGG 7 cut(s) 311, 330, 560, 776, 1192, 1376, 1805
BseMI GCAATG 2 cut(s) 124, 1539
BseMII CTCAG 4 cut(s) 425, 578, 696, 826
BseNI ACTGG 5 cut(s) 407, 1047, 1504, 1551, 1576
BseRI GAGGAG 1 cut(s) 641
BseXI GCAGC 3 cut(s) 1035, 1236, 1408
BshFI GGCC 5 cut(s) 636, 780, 845, 1127, 1287
BshNI GGYRCC 2 cut(s) 1214, 1795
BsiSI CCGG 3 cut(s) 468, 842, 1288
BslFI GGGAC 1 cut(s) 555
BslI CCNNNNNNNGG 7 cut(s) 311, 330, 560, 776, 1192, 1376, 1805
BsmFI GGGAC 1 cut(s) 555
BsmI GAATGC 2 cut(s) 1362, 1503
BsnI GGCC 5 cut(s) 636, 780, 845, 1127, 1287
Bsp143I GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
Bsp1720I GCTNAGC 1 cut(s) 587
BspACI CCGC 3 cut(s) 460, 816, 1139
BspANI GGCC 5 cut(s) 636, 780, 845, 1127, 1287
BspCNI CTCAG 4 cut(s) 426, 579, 695, 825
BspHI TCATGA 1 cut(s) 54
BspLI GGNNCC 8 cut(s) 295, 543, 544, 1126, 1216, 1292, 1634, 1797
BspMAI CTGCAG 1 cut(s) 1398
BspPI GGATC 4 cut(s) 164, 685, 1285, 1298
BspT107I GGYRCC 2 cut(s) 1214, 1795
BspTI CTTAAG 1 cut(s) 442
BsrDI GCAATG 2 cut(s) 124, 1539
BsrFI RCCGGY 1 cut(s) 467
BsrI ACTGG 5 cut(s) 407, 1047, 1504, 1551, 1576
BssAI RCCGGY 1 cut(s) 467
BssECI CCNNGG 3 cut(s) 558, 1120, 1191
BssMI GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
BssT1I CCWWGG 3 cut(s) 558, 1120, 1191
Bst2UI CCWGG 1 cut(s) 771
Bst4CI ACNGT 1 cut(s) 1269
Bst6I CTCTTC 1 cut(s) 1303
BstAFI CTTAAG 1 cut(s) 442
BstENI CCTNNNNNAGG 2 cut(s) 328, 774
BstF5I GGATG 2 cut(s) 546, 1007
BstKTI GATC 6 cut(s) 172, 693, 726, 1293, 1696, 1735
BstMBI GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
BstMWI GCNNNNNNNGC 6 cut(s) 13, 363, 468, 874, 1492, 1605
BstNI CCWGG 1 cut(s) 771
BstNSI RCATGY 2 cut(s) 392, 790
BstSCI CCNGG 2 cut(s) 769, 840
BstSFI CTRYAG 3 cut(s) 521, 1083, 1394
BstV1I GCAGC 3 cut(s) 1035, 1236, 1408
BstV2I GAAGAC 2 cut(s) 721, 1673
BstX2I RGATCY 3 cut(s) 1290, 1693, 1732
BstYI RGATCY 3 cut(s) 1290, 1693, 1732
Bsu36I CCTNAGG 1 cut(s) 1303
BsuRI GGCC 5 cut(s) 636, 780, 845, 1127, 1287
BtsCI GGATG 2 cut(s) 546, 1007
BtsIMutI CAGTG 2 cut(s) 1497, 1544
CciI TCATGA 1 cut(s) 54
Cfr10I RCCGGY 1 cut(s) 467
Cfr13I GGNCC 4 cut(s) 542, 668, 1125, 1765
CsiI ACCWGGT 1 cut(s) 769
Csp6I GTAC 2 cut(s) 1215, 1796
CspCI CAANNNNNGTGG 2 cut(s) 540, 575
CviAII CATG 5 cut(s) 50, 55, 192, 389, 787
CviQI GTAC 2 cut(s) 1215, 1796
DpnI GATC 6 cut(s) 171, 692, 725, 1292, 1695, 1734
DpnII GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
DriI GACNNNNNGTC 1 cut(s) 1771
Eam1104I CTCTTC 1 cut(s) 1303
Eam1105I GACNNNNNGTC 1 cut(s) 1771
EarI CTCTTC 1 cut(s) 1303
Eco130I CCWWGG 3 cut(s) 558, 1120, 1191
Eco147I AGGCCT 1 cut(s) 780
Eco47I GGWCC 3 cut(s) 542, 668, 1765
Eco57I CTGAAG 2 cut(s) 1550, 1667
Eco81I CCTNAGG 1 cut(s) 1303
EcoNI CCTNNNNNAGG 2 cut(s) 328, 774
EcoO109I RGGNCCY 1 cut(s) 542
EcoRI GAATTC 3 cut(s) 402, 824, 1578
EcoRII CCWGG 1 cut(s) 769
EcoT14I CCWWGG 3 cut(s) 558, 1120, 1191
EcoT22I ATGCAT 1 cut(s) 112
ErhI CCWWGG 3 cut(s) 558, 1120, 1191
FaeI CATG 5 cut(s) 53, 58, 195, 392, 790
FaqI GGGAC 1 cut(s) 555
FatI CATG 5 cut(s) 49, 54, 191, 388, 786
FauI CCCGC 1 cut(s) 1132
FauNDI CATATG 1 cut(s) 12
FblI GTMKAC 1 cut(s) 38
Fnu4HI GCNGC 3 cut(s) 1024, 1250, 1397
FokI GGATG 2 cut(s) 533, 994
Fsp4HI GCNGC 3 cut(s) 1024, 1250, 1397
FspBI CTAG 4 cut(s) 363, 971, 1275, 1784
GluI GCNGC 3 cut(s) 1024, 1250, 1397
GsuI CTGGAG 2 cut(s) 1052, 1593
HaeIII GGCC 5 cut(s) 636, 780, 845, 1127, 1287
HapII CCGG 3 cut(s) 468, 842, 1288
Hin1II CATG 5 cut(s) 53, 58, 195, 392, 790
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 3 cut(s) 503, 866, 1421
HinfI GANTC 5 cut(s) 200, 370, 1147, 1647, 1809
HpaII CCGG 3 cut(s) 468, 842, 1288
HphI GGTGA 3 cut(s) 67, 1306, 1802
Hpy166II GTNNAC 6 cut(s) 39, 208, 412, 1209, 1265, 1272
Hpy188I TCNGA 9 cut(s) 169, 484, 537, 625, 742, 1170, 1327, 1414, 1605
Hpy188III TCNNGA 9 cut(s) 55, 173, 1031, 1151, 1186, 1583, 1619, 1753, 1784
Hpy8I GTNNAC 6 cut(s) 39, 208, 412, 1209, 1265, 1272
HpyAV CCTTC 8 cut(s) 56, 80, 389, 430, 564, 1349, 1665, 1799
HpyCH4III ACNGT 1 cut(s) 1269
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 363, 468, 874, 1492, 1605
Hsp92II CATG 5 cut(s) 53, 58, 195, 392, 790
KflI GGGWCCC 1 cut(s) 542
KpnI GGTACC 2 cut(s) 1218, 1799
Kzo9I GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 3 cut(s) 1035, 1236, 1408
LweI GCATC 3 cut(s) 256, 447, 520
MabI ACCWGGT 1 cut(s) 769
MaeI CTAG 4 cut(s) 363, 971, 1275, 1784
MaeIII GTNAC 2 cut(s) 1239, 1379
MalI GATC 6 cut(s) 171, 692, 725, 1292, 1695, 1734
MboI GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
MboII GAAGA 5 cut(s) 721, 1290, 1543, 1650, 1673
MfeI CAATTG 2 cut(s) 663, 1319
MflI RGATCY 3 cut(s) 1290, 1693, 1732
MlyI GAGTC 2 cut(s) 194, 1818
MmeI TCCRAC 1 cut(s) 112
Mph1103I ATGCAT 1 cut(s) 112
MroXI GAANNNNTTC 3 cut(s) 568, 619, 979
MseI TTAA 5 cut(s) 443, 708, 753, 1178, 1568
MspA1I CMGCKG 2 cut(s) 586, 816
MspCI CTTAAG 1 cut(s) 442
MspI CCGG 3 cut(s) 468, 842, 1288
MspR9I CCNGG 2 cut(s) 771, 842
MunI CAATTG 2 cut(s) 663, 1319
Mva1269I GAATGC 2 cut(s) 1362, 1503
MvaI CCWGG 1 cut(s) 771
MwoI GCNNNNNNNGC 6 cut(s) 13, 363, 468, 874, 1492, 1605
NciI CCSGG 1 cut(s) 842
NdeI CATATG 1 cut(s) 12
NdeII GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
NlaIII CATG 5 cut(s) 53, 58, 195, 392, 790
NlaIV GGNNCC 8 cut(s) 295, 543, 544, 1126, 1216, 1292, 1634, 1797
NmeAIII GCCGAG 1 cut(s) 930
NsiI ATGCAT 1 cut(s) 112
NspI RCATGY 2 cut(s) 392, 790
PagI TCATGA 1 cut(s) 54
PceI AGGCCT 1 cut(s) 780
PciI ACATGT 1 cut(s) 388
PctI GAATGC 2 cut(s) 1362, 1503
PdmI GAANNNNTTC 3 cut(s) 568, 619, 979
PfeI GAWTC 3 cut(s) 370, 1147, 1647
PflMI CCANNNNNTGG 1 cut(s) 1376
PkrI GCNGC 3 cut(s) 1025, 1251, 1398
PleI GAGTC 2 cut(s) 194, 1817
PpsI GAGTC 2 cut(s) 194, 1817
PpuMI RGGWCCY 1 cut(s) 542
PscI ACATGT 1 cut(s) 388
PsiI TTATAA 2 cut(s) 1004, 1560
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 1 cut(s) 769
PspGI CCWGG 1 cut(s) 769
PspN4I GGNNCC 8 cut(s) 295, 543, 544, 1126, 1216, 1292, 1634, 1797
PspPI GGNCC 4 cut(s) 542, 668, 1125, 1765
PspPPI RGGWCCY 1 cut(s) 542
PstI CTGCAG 1 cut(s) 1398
PsuI RGATCY 3 cut(s) 1290, 1693, 1732
PvuII CAGCTG 1 cut(s) 586
RsaI GTAC 2 cut(s) 1216, 1797
RsaNI GTAC 2 cut(s) 1215, 1796
SaqAI TTAA 5 cut(s) 443, 708, 753, 1178, 1568
SatI GCNGC 3 cut(s) 1024, 1250, 1397
Sau3AI GATC 6 cut(s) 169, 690, 723, 1290, 1693, 1732
Sau96I GGNCC 4 cut(s) 542, 668, 1125, 1765
SchI GAGTC 2 cut(s) 194, 1818
ScrFI CCNGG 2 cut(s) 771, 842
SexAI ACCWGGT 1 cut(s) 769
SfaNI GCATC 3 cut(s) 256, 447, 520
SfcI CTRYAG 3 cut(s) 521, 1083, 1394
SinI GGWCC 3 cut(s) 542, 668, 1765
SmlI CTYRAG 1 cut(s) 442
SmoI CTYRAG 1 cut(s) 442
SseBI AGGCCT 1 cut(s) 780
SsiI CCGC 3 cut(s) 460, 816, 1139
SspI AATATT 1 cut(s) 1257
SspMI CTAG 4 cut(s) 363, 971, 1275, 1784
StuI AGGCCT 1 cut(s) 780
StyD4I CCNGG 2 cut(s) 769, 840
StyI CCWWGG 3 cut(s) 558, 1120, 1191
TaaI ACNGT 1 cut(s) 1269
TaqII GACCGA 1 cut(s) 24
TfiI GAWTC 3 cut(s) 370, 1147, 1647
Tru1I TTAA 5 cut(s) 443, 708, 753, 1178, 1568
Tru9I TTAA 5 cut(s) 443, 708, 753, 1178, 1568
TscAI CASTG 2 cut(s) 1504, 1551
TseI GCWGC 3 cut(s) 1023, 1249, 1396
TspDTI ATGAA 8 cut(s) 38, 135, 325, 561, 837, 972, 1362, 1737
TspGWI ACGGA 2 cut(s) 193, 306
TspRI CASTG 2 cut(s) 1504, 1551
Van91I CCANNNNNTGG 1 cut(s) 1376
Vha464I CTTAAG 1 cut(s) 442
VpaK11BI GGWCC 3 cut(s) 542, 668, 1765
XagI CCTNNNNNAGG 2 cut(s) 328, 774
XapI RAATTY 7 cut(s) 146, 402, 474, 824, 928, 1578, 1722
XbaI TCTAGA 1 cut(s) 1783
XceI RCATGY 2 cut(s) 392, 790
XmiI GTMKAC 1 cut(s) 38
XmnI GAANNNNTTC 3 cut(s) 568, 619, 979
XspI CTAG 4 cut(s) 363, 971, 1275, 1784
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.