RLG00000027063
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
8080813 .. 8084600
3788 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027063

Sequence Viewer

Length: 3252 bp
ATGGAGCTTCATGAACCAAGGTCATGTGCATTTTGGTTTAAATCCCTTCATGTGATTAACCATCTTCTCCTCGTTATGAACTTCTTCCTACCTACCACTATTGCAAGATCATTTGGAAATGAAACCGATAGATTTGCTTTACTCAAATTCAAAGAATCCATAATCACTGACCCACTAGGGTTCTTGAACACATGGAATGACTCCCTTCACTTTTGCAACTGGTATGGGATTTCCTGCGGCTCAAGGCATCAGAGAGTAGTAGCCTTGAACCTTTCTCATTCTGATTTGCATGGAACCATATCACCTTACACTGGCAACCTCTCTTTTCTAAGGTCCATGGACCTTGAAAACAACAGCTTCTCTGGCAATATTCCACAGCAACTTGATCATTTATTCCGCCTGCGCTATTTGAATGTAAGTCACAACATGTTGGAGGGGGCAATTCCAGTCAACCTGACCTCCTGCCCAGAACTGAGTCGCATAGATTTATGGTCAAACCGTCTTACAGGCACAATTCCATCAGACCTTGGCTCATTGATGAAGCTTGTGTTGATAGGTCTTGAGGAAAACAATTTGACAGGAGGCATCCCACCTTCCTTGGGAAATCTTTCATCAATCCGGACGCTTGGTCTAACATCTAACAATTTGGTGGGCAACGTTCCAGAGGAGATAGGCCGACTGAGAAGCTTATCTTATTTTGGCGTTGGGGACAATAAACTCTCTGGTATGATACCTCCTTCCCTTTTTAACATATCATCTATGGAGTCCTTCACACTTGGACATAATAACCTTAAGGGCAGTATTCCACCCACCATAGGCCTCGACATGCCTCATCTCCTAGAAATGTTCGTCGGCGGAAATGAACTCTCTGGGCAAATCCCATCTTCATTTTGCAATGCTTCTCAGATTAATGTACTTGATGTTGGGGATAATAATTTTGTAGGGCAAGTTCCCAAATGTTTTGGAGATCTTCCGGATCTCCAGTGGCTCAGTGTAAGTGAAAATTATCTAGGAAGTTTTTCTGCTAATGACTTGGATTTTATAACATCCTTGGTCAATTGCAGCAAACTGGATACCCTTGATATGGGTTCCAACAATTTTGGAGGTGTTTTACCCAACTCTGTAGCCAACTTGTCAACTCAACTGACTGCAATCTTCTTTGAAGGCAATCAAATATCAGGAGTGATCCCTGAAACATTAGAAAATCTCAACAGTTTAATAGCCTTGGGCCTGGAAGAAAACCTGTTCAGAGGCGCCATTCCTTCCTCTATTGCCAAGTTACAAAAGCTGCAAGAATTGGATTTAGATGGTAATAGATTATCAGGATGGATTCCATCTTCCATAGGAAACCTCACACAAGTGTATTACCTCGACTTGTCAGGAAATGACTTGGAAGGAAACATTCCTCCAAGTATTGGGAACTGCCAACATTTGCAGGAGTTGTATATATCAAATAATAGGCTAAGTGGAGATATACCACCACAGGTGATTGGTCTTTTCTCTCTTGTCCGTCTCAACTTATCACATAACTCACTAACTGGCAGTCTGCCTGTGGAAGTAGGTAAGCTGAAGAATATCAATACACTGAAGATCGCTGAAAATAATTTGACCGGAGAAATTCCAGAAATCATTGGTGGCTGTATGAGCCTTGAACTTCTTTACCTACAAGGGAATCTCTTTCATGGTACGATACCTTCTTCTTTGGCTTCTTTGAAAGGTCTTCAGTACTTGGATATTTCACGGAATAACTTGTCAGGTCAAATTCCAAAAGATATCCAAAGACTTGCCTTCTTGCTATATTTGAACCTGTCTTTCAATAATCTAGAAGGTGAGGTACCAAAAGAAGGAGCCTTTCGAAACACAAGTGCAACATCCTTGGTTGGAAATACCAAACTTTGTGTCGATGGTGTTTCTGAATTTCAACTATCAGCATGCCCCATCAAAAAGAAGAGAAAATTCAAACTAAAGTTCACAATTTCGTTAGTGGCTGGATGCTCTCTGCTGCTTGCAGTCTTGCGTACTCTTTATTGGAGGAGAAAATTGAGAAAGAAACCATTAGCTTTAGACTCATCGATCAACTTCTTTCCAGAGGTTTCATACAAGACACTTCATCAAGCTACTGGTGGATTCTCTCCAAGCACTCTAATTGGATCAGGCGGTTTCGGCTCTGTACACAAAGGGATTCTTGATCAGGAAGAAAACAGCGTGGTTGCCATAAAGGTCATCAACCATCAACAGAGAGGAGCTTCTAAGAGTTTCACTGCAGAATGCAATGCACTAAGAAATATCCGGCACCGGAATCTTGTCAAGATCTTTACATGCTGCTCCAGCATGGATTACAATGGTACTGAATTCAAAGCTCTAATCTTTGAATATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACCGATCAATGAGTTTGACCCTTCTTCAAAGATTGAATATTGTTGTTGATGTGGCTTCTGCATTATGTTATCTTCATGACCATTGTGATCCTCCAATCATTCACTGCGACATGAAGCCAAGCAATGTTCTTCTTGACGATGATATGGTTGCTCATGTAGGTGATTTTGGCTTAGCCAGACTCATCTCAACCACCACAGAGTCCTCGCAAACTCAAAGTAGCACAATTGGAATAAAGGGAACAATCGGCTATGCTGCTCCAGAGTACGCAAGTGGCGTAGAGGCATCAACACAGGGAGATGTATACAGTTATGGGATTCTTGTATTGGAAATGTTCACAGGAAGAAGACCCACTGACGAAATGTTCAAAGACGGTTTGAAACTCCACGACTTTGTTAAGATGGCATTACCAGGAAGGCTTGTGCAGATTGTGGACGCTGCTCTTCTCGCCACCCTAGAAAAGACATCTCCTGCAGCAACTGCAGGAAATGAAGTGAACTACATGCTTACAGGTTATAACGATGAAATTGAAGCAGAAGAGGAAAATAGAGATTATAAGAACCTAAGCAGGGTGGACACACGTGTGTGGAAGTGTATACATTCAATATTTGAGATAGGACTGGCGTGCTCGGAGGAATCACCAGAGAATAGAATGTGTATGGAGGATGTCCTCAGGGACCTCCACCGTATACAAATTGCTTACAATGGTGTTGTGATCAATCGAGAGAGACCAAGAAGCAAAACAACAGATTATGGCATGGGAAGCGATACTCTGTTTGGAGTTGCTTGTTCCAGAGAGCGAATGGAGACTAGCAAATCTTGTAGGCTTGTAGCTTAA

Protein Analysis

1084

Amino Acids

119.3

Weight (kDa)

5.76

Isoelectric Point (pI)

37.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 9.2e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 102 - 333 9.6e-10 Leucine-rich repeat region
LRR_14 PF23598 398 - 483 5.4e-08 Leucine-rich repeat region
LRR_8 PF13855 409 - 464 5.9e-06 Leucine rich repeat
LRR_8 PF13855 453 - 512 2.8e-06 Leucine rich repeat
LRR_14 PF23598 498 - 609 6.6e-08 Leucine-rich repeat region
LRR_8 PF13855 549 - 608 5.4e-07 Leucine rich repeat
Pkinase PF00069 714 - 928 4.6e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 715 - 927 1.6e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000248)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g31390 FvH4_5g31630 FvH4_5g31631 FvH4_7g24151 FvH4_7g24160 FvH4_7g24240 FvH4_7g24242 FvH4_7g24243 FvH4_7g24510 FvH4_7g24920 FvH4_7g24920 FvH4_7g24920 FvH4_7g29910
malus_domestica MD01G1131800.v1.1 MD01G1150000.v1.1 MD01G1151300.v1.1
prunus_persica Prupe.2G248300_v2.0.a1
pyrus_communis pycom01g16800
rosa_chinensis RchiOBHm_Chr1g0339821 RchiOBHm_Chr1g0345151 RchiOBHm_Chr1g0346851 RchiOBHm_Chr1g0351981 RchiOBHm_Chr1g0369731 RchiOBHm_Chr1g0369841 RchiOBHm_Chr1g0369861 RchiOBHm_Chr1g0369931 RchiOBHm_Chr1g0369961 RchiOBHm_Chr1g0370261 RchiOBHm_Chr1g0370281 RchiOBHm_Chr5g0076391 RchiOBHm_Chr6g0248051 RchiOBHm_Chr6g0248071
rosa_laevigata RLG00000002548 RLG00000013479 RLG00000027042 RLG00000027045 RLG00000027047 RLG00000027060 RLG00000027063 RLG00000027082 RLG00000027084 RLG00000027087 RLG00000027089 RLG00000027090 RLG00000027091 RLG00000027092 RLG00000027094 RLG00000027097 RLG00000027100 RLG00000027101 RLG00000027111 RLG00000028769 RLG00000028851 RLG00000029244 RLG00000030021
rosa_multiflora Rmu_co7968444.1_g000001 Rmu_co8060564.1_g000001 Rmu_co8098766.1_g000001 Rmu_co8172886.1_g000001 Rmu_co8291893.1_g000001 Rmu_co8327887.1_g000001 Rmu_co8406981.1_g000001 Rmu_co8449189.1_g000001 Rmu_co8470871.1_g000001 Rmu_sc0000756.1_g000006 Rmu_sc0001154.1_g000028 Rmu_sc0001565.1_g000055 Rmu_sc0001657.1_g000002 Rmu_sc0002095.1_g000014 Rmu_sc0002147.1_g000001 Rmu_sc0002705.1_g000004 Rmu_sc0002705.1_g000005 Rmu_sc0004087.1_g000025 Rmu_sc0005500.1_g000022 Rmu_sc0006707.1_g000005 Rmu_sc0006707.1_g000009 Rmu_sc0008140.1_g000012 Rmu_sc0008140.1_g000019 Rmu_sc0016176.1_g000001 Rmu_sc0016906.1_g000006 Rmu_sc0028980.1_g000001 Rmu_sc0041369.1_g000001
rosa_roxburghii Rroxscaffold_3G00232610 Rroxscaffold_4G00286690 Rroxscaffold_4G00286920 Rroxscaffold_4G00286930 Rroxscaffold_4G00286960 Rroxscaffold_4G00286980 Rroxscaffold_4G00287030 Rroxscaffold_4G00287040 Rroxscaffold_4G00287070 Rroxscaffold_4G00287090 Rroxscaffold_4G00287330 Rroxscaffold_4G00287430 Rroxscaffold_4G00303380 Rroxscaffold_4G00303400 Rroxscaffold_4G00303410 Rroxscaffold_4G00308100 Rroxscaffold_4G00308480 Rroxscaffold_4G00313700 Rroxscaffold_4G00322910 Rroxscaffold_7G00190680 Rroxscaffold_7G00193490
rosa_rugosa Rorug01G0032200 Rorug01G0139400.1 Rorug01G0139600.1 Rorug01G0139700.1 Rorug01G0184400 Rorug01G0351900 Rorug01G0351900 Rorug01G0352600 Rorug01G0352600 Rorug01G0352800 Rorug01G0355300 Rorug01G0355400 Rorug01G0356700.1 Rorug01G0356800 Rorug06G0090600 Rorug07G0276100
rosa_samantha Rh1AG201900 Rh1AG361300 Rh1AG365100 Rh6AG204000
rosa_wichuraiana Rw0G015480 Rw1G007000 Rw1G008190 Rw1G012880 Rw1G012990 Rw1G016950 Rw1G031720 Rw1G031800 Rw1G031820 Rw1G032020 Rw1G032180 Rw6G017720 Rw7G035600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1043, 2931, 2970
Acc65I GGTACC 1 cut(s) 1834
AccB1I GGYRCC 3 cut(s) 1253, 1834, 2292
AccB7I CCANNNNNTGG 1 cut(s) 1415
AccI GTMKAC 3 cut(s) 2718, 3010, 3103
AccIII TCCGGA 2 cut(s) 618, 973
AciI CCGC 4 cut(s) 237, 397, 855, 2157
AclI AACGTT 1 cut(s) 657
AclWI GGATC 4 cut(s) 984, 1180, 2158, 2498
AcsI RAATTY 6 cut(s) 146, 1617, 1761, 1916, 1955, 2351
AcuI CTGAAG 3 cut(s) 1589, 1607, 1706
AcvI CACGTG 1 cut(s) 2996
AcyI GRCGYC 1 cut(s) 1254
AfaI GTAC 8 cut(s) 915, 1687, 1727, 1836, 2020, 2172, 2347, 2681
AfiI CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1084, 1415, 1844, 2983
AflII CTTAAG 1 cut(s) 791
AflIII ACRYGT 3 cut(s) 426, 2993, 2995
AhdI GACNNNNNGTC 1 cut(s) 627
AjnI CCWGG 2 cut(s) 1230, 2824
AleI CACNNNNGTG 3 cut(s) 1358, 2996, 2998
Alw21I GWGCWC 1 cut(s) 3044
Alw26I GTCTC 3 cut(s) 1517, 3136, 3215
AlwI GGATC 4 cut(s) 984, 1180, 2158, 2498
AlwNI CAGNNNCTG 1 cut(s) 2894
Aor13HI TCCGGA 2 cut(s) 618, 973
AoxI GGCC 3 cut(s) 673, 817, 1228
ApeKI GCWGC 8 cut(s) 1062, 1288, 2002, 2322, 2404, 2669, 2852, 2888
ApoI RAATTY 6 cut(s) 146, 1617, 1761, 1916, 1955, 2351
ArsI GACNNNNNNTTYG 2 cut(s) 1884, 1916
AseI ATTAAT 1 cut(s) 909
Asp700I GAANNNNTTC 3 cut(s) 83, 607, 1018
Asp718I GGTACC 1 cut(s) 1834
AspLEI GCGC 2 cut(s) 405, 1256
AspS9I GGNCC 4 cut(s) 333, 340, 1228, 3091
AsuHPI GGTGA 5 cut(s) 294, 1498, 1841, 2588, 3045
AsuII TTCGAA 1 cut(s) 1855
AvaII GGWCC 3 cut(s) 333, 340, 3091
AxyI CCTNAGG 1 cut(s) 3086
BanI GGYRCC 3 cut(s) 1253, 1834, 2292
BarI GAAGNNNNNNTAC 4 cut(s) 1678, 1710, 1818, 1850
BbrPI CACGTG 1 cut(s) 2996
BbsI GAAGAC 2 cut(s) 1712, 2767
Bbv12I GWGCWC 1 cut(s) 3044
BbvI GCAGC 8 cut(s) 1074, 1275, 1989, 2309, 2391, 2656, 2839, 2900
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 2 cut(s) 1232, 2826
BciVI GTATCC 1 cut(s) 1066
BclI TGATCA 3 cut(s) 385, 2188, 3129
BcoDI GTCTC 3 cut(s) 1517, 3136, 3215
BfaI CTAG 6 cut(s) 176, 839, 1010, 1823, 2870, 3225
BfmI CTRYAG 4 cut(s) 1122, 2262, 2886, 2895
BfoI RGCGCY 1 cut(s) 1257
BfrI CTTAAG 1 cut(s) 791
BfuI GTATCC 1 cut(s) 1066
BglII AGATCT 2 cut(s) 967, 2310
BisI GCNGC 9 cut(s) 238, 1063, 1289, 2003, 2323, 2405, 2670, 2853, 2889
BlpI GCTNAGC 1 cut(s) 2587
BlsI GCNGC 9 cut(s) 239, 1064, 1290, 2004, 2324, 2406, 2671, 2854, 2890
BmcAI AGTACT 1 cut(s) 1727
Bme1390I CCNGG 2 cut(s) 1232, 2826
Bme18I GGWCC 3 cut(s) 333, 340, 3091
BmeRI GACNNNNNGTC 1 cut(s) 627
BmgT120I GGNCC 4 cut(s) 333, 340, 1228, 3091
BmiI GGNNCC 7 cut(s) 295, 1090, 1255, 1836, 1849, 2294, 3092
BmrFI CCNGG 2 cut(s) 1232, 2826
BmsI GCATC 4 cut(s) 256, 594, 1982, 2708
BpiI GAAGAC 2 cut(s) 1712, 2767
BpmI CTGGAG 3 cut(s) 965, 2311, 2658
Bpu10I CCTNAGC 1 cut(s) 2978
Bpu1102I GCTNAGC 1 cut(s) 2587
Bpu14I TTCGAA 1 cut(s) 1855
BpuEI CTTGAG 2 cut(s) 226, 581
Bsa29I ATCGAT 1 cut(s) 2072
BsaAI YACGTR 1 cut(s) 2996
BsaHI GRCGYC 1 cut(s) 1254
BsaI GGTCTC 1 cut(s) 3136
BsaJI CCNNGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
BsaWI WCCGGW 4 cut(s) 618, 973, 1610, 2295
BsaXI ACNNNNNCTCC 2 cut(s) 443, 473
Bsc4I CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1084, 1415, 1844, 2983
Bse1I ACTGG 8 cut(s) 224, 316, 446, 982, 1074, 1543, 2125, 3039
Bse21I CCTNAGG 1 cut(s) 3086
Bse3DI GCAATG 3 cut(s) 901, 2278, 2545
BseAI TCCGGA 2 cut(s) 618, 973
BseBI CCWGG 2 cut(s) 1232, 2826
BseCI ATCGAT 1 cut(s) 2072
BseDI CCNNGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
BseGI GGATG 6 cut(s) 585, 1046, 1331, 1871, 1997, 3085
BseLI CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1084, 1415, 1844, 2983
BseMI GCAATG 3 cut(s) 901, 2278, 2545
BseMII CTCAG 5 cut(s) 464, 671, 917, 1003, 3100
BseNI ACTGG 8 cut(s) 224, 316, 446, 982, 1074, 1543, 2125, 3039
BseRI GAGGAG 5 cut(s) 59, 680, 2047, 2256, 2411
BseXI GCAGC 8 cut(s) 1074, 1275, 1989, 2309, 2391, 2656, 2839, 2900
BsgI GTGCAG 2 cut(s) 2390, 2858
BshFI GGCC 3 cut(s) 675, 819, 1230
BshNI GGYRCC 3 cut(s) 1253, 1834, 2292
BshVI ATCGAT 1 cut(s) 2072
BsiHKAI GWGCWC 1 cut(s) 3044
BsiSI CCGG 5 cut(s) 619, 974, 1611, 2290, 2296
BslFI GGGAC 2 cut(s) 722, 3104
BslI CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1084, 1415, 1844, 2983
BsmAI GTCTC 3 cut(s) 1517, 3136, 3215
BsmBI CGTCTC 1 cut(s) 1517
BsmFI GGGAC 2 cut(s) 722, 3104
BsmI GAATGC 1 cut(s) 2273
BsnI GGCC 3 cut(s) 675, 819, 1230
Bso31I GGTCTC 1 cut(s) 3136
Bsp119I TTCGAA 1 cut(s) 1855
Bsp1286I GDGCHC 1 cut(s) 3044
Bsp13I TCCGGA 2 cut(s) 618, 973
Bsp1407I TGTACA 1 cut(s) 2170
Bsp1720I GCTNAGC 1 cut(s) 2587
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 4 cut(s) 237, 397, 855, 2157
BspANI GGCC 3 cut(s) 675, 819, 1230
BspCNI CTCAG 5 cut(s) 465, 672, 916, 1002, 3099
BspDI ATCGAT 1 cut(s) 2072
BspEI TCCGGA 2 cut(s) 618, 973
BspHI TCATGA 2 cut(s) 10, 2491
BspLI GGNNCC 7 cut(s) 295, 1090, 1255, 1836, 1849, 2294, 3092
BspMAI CTGCAG 3 cut(s) 2266, 2890, 2899
BspPI GGATC 4 cut(s) 984, 1180, 2158, 2498
BspQI GCTCTTC 1 cut(s) 2862
BspT104I TTCGAA 1 cut(s) 1855
BspT107I GGYRCC 3 cut(s) 1253, 1834, 2292
BspTI CTTAAG 1 cut(s) 791
BspTNI GGTCTC 1 cut(s) 3136
BsrDI GCAATG 3 cut(s) 901, 2278, 2545
BsrGI TGTACA 1 cut(s) 2170
BsrI ACTGG 8 cut(s) 224, 316, 446, 982, 1074, 1543, 2125, 3039
BssECI CCNNGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
BssNAI GTATAC 3 cut(s) 2719, 3011, 3104
BssNI GRCGYC 1 cut(s) 1254
BssT1I CCWWGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
Bst1107I GTATAC 3 cut(s) 2719, 3011, 3104
Bst2UI CCWGG 2 cut(s) 1232, 2826
Bst4CI ACNGT 5 cut(s) 500, 1214, 2723, 2789, 3101
Bst6I CTCTTC 3 cut(s) 1943, 2862, 2946
BstACI GRCGYC 1 cut(s) 1254
BstAFI CTTAAG 1 cut(s) 791
BstAPI GCANNNNNTGC 1 cut(s) 2894
BstAUI TGTACA 1 cut(s) 2170
BstBAI YACGTR 1 cut(s) 2996
BstBI TTCGAA 1 cut(s) 1855
BstC8I GCNNGC 4 cut(s) 401, 1933, 2007, 3040
BstDSI CCRYGG 1 cut(s) 336
BstF5I GGATG 6 cut(s) 585, 1046, 1331, 1871, 1997, 3085
BstH2I RGCGCY 1 cut(s) 1257
BstHHI GCGC 2 cut(s) 405, 1256
BstMAI GTCTC 3 cut(s) 1517, 3136, 3215
BstMWI GCNNNNNNNGC 7 cut(s) 363, 1644, 2163, 2328, 2861, 2894, 3177
BstNI CCWGG 2 cut(s) 1232, 2826
BstNSI RCATGY 5 cut(s) 430, 829, 1935, 2322, 2920
BstSCI CCNGG 2 cut(s) 1230, 2824
BstSFI CTRYAG 4 cut(s) 1122, 2262, 2886, 2895
BstV1I GCAGC 8 cut(s) 1074, 1275, 1989, 2309, 2391, 2656, 2839, 2900
BstV2I GAAGAC 2 cut(s) 1712, 2767
BstX2I RGATCY 3 cut(s) 967, 976, 2310
BstYI RGATCY 3 cut(s) 967, 976, 2310
BstZ17I GTATAC 3 cut(s) 2719, 3011, 3104
Bsu15I ATCGAT 1 cut(s) 2072
Bsu36I CCTNAGG 1 cut(s) 3086
BsuI GTATCC 1 cut(s) 1066
BsuRI GGCC 3 cut(s) 675, 819, 1230
BsuTUI ATCGAT 1 cut(s) 2072
BtgI CCRYGG 1 cut(s) 336
BtsCI GGATG 6 cut(s) 585, 1046, 1331, 1871, 1997, 3085
BtsI GCAGTG 2 cut(s) 2259, 2518
BtsIMutI CAGTG 8 cut(s) 165, 309, 989, 997, 1583, 2259, 2518, 2766
Cac8I GCNNGC 4 cut(s) 401, 1933, 2007, 3040
CaiI CAGNNNCTG 1 cut(s) 2894
CciI TCATGA 2 cut(s) 10, 2491
CfoI GCGC 2 cut(s) 405, 1256
Cfr13I GGNCC 4 cut(s) 333, 340, 1228, 3091
ClaI ATCGAT 1 cut(s) 2072
CseI GACGC 2 cut(s) 631, 2858
Csp6I GTAC 8 cut(s) 914, 1686, 1726, 1835, 2019, 2171, 2346, 2680
CspCI CAANNNNNGTGG 2 cut(s) 579, 614
CviQI GTAC 8 cut(s) 914, 1686, 1726, 1835, 2019, 2171, 2346, 2680
DinI GGCGCC 1 cut(s) 1255
DraI TTTAAA 1 cut(s) 40
DriI GACNNNNNGTC 1 cut(s) 627
Eam1104I CTCTTC 3 cut(s) 1943, 2862, 2946
Eam1105I GACNNNNNGTC 1 cut(s) 627
EarI CTCTTC 3 cut(s) 1943, 2862, 2946
EciI GGCGGA 2 cut(s) 386, 870
Eco130I CCWWGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
Eco147I AGGCCT 1 cut(s) 819
Eco31I GGTCTC 1 cut(s) 3136
Eco32I GATATC 1 cut(s) 1774
Eco47I GGWCC 3 cut(s) 333, 340, 3091
Eco57I CTGAAG 3 cut(s) 1589, 1607, 1706
Eco72I CACGTG 1 cut(s) 2996
Eco81I CCTNAGG 1 cut(s) 3086
EcoO109I RGGNCCY 1 cut(s) 3091
EcoRI GAATTC 1 cut(s) 2351
EcoRII CCWGG 2 cut(s) 1230, 2824
EcoRV GATATC 1 cut(s) 1774
EcoT14I CCWWGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
EgeI GGCGCC 1 cut(s) 1255
EheI GGCGCC 1 cut(s) 1255
ErhI CCWWGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
Esp3I CGTCTC 1 cut(s) 1517
FalI AAGNNNNNCTT 4 cut(s) 676, 708, 2169, 2201
FaqI GGGAC 2 cut(s) 722, 3104
FbaI TGATCA 3 cut(s) 385, 2188, 3129
FblI GTMKAC 3 cut(s) 2718, 3010, 3103
Fnu4HI GCNGC 9 cut(s) 238, 1063, 1289, 2003, 2323, 2405, 2670, 2853, 2889
FokI GGATG 6 cut(s) 572, 1033, 1338, 1858, 2004, 3092
Fsp4HI GCNGC 9 cut(s) 238, 1063, 1289, 2003, 2323, 2405, 2670, 2853, 2889
FspBI CTAG 6 cut(s) 176, 839, 1010, 1823, 2870, 3225
GlaI GCGC 2 cut(s) 404, 1255
GluI GCNGC 9 cut(s) 238, 1063, 1289, 2003, 2323, 2405, 2670, 2853, 2889
GsuI CTGGAG 3 cut(s) 965, 2311, 2658
HaeII RGCGCY 1 cut(s) 1257
HaeIII GGCC 3 cut(s) 675, 819, 1230
HapII CCGG 5 cut(s) 619, 974, 1611, 2290, 2296
HgaI GACGC 2 cut(s) 631, 2858
HhaI GCGC 2 cut(s) 405, 1256
Hin1I GRCGYC 1 cut(s) 1254
Hin6I GCGC 2 cut(s) 403, 1254
HinP1I GCGC 2 cut(s) 403, 1254
HincII GTYRAC 2 cut(s) 451, 1137
HindII GTYRAC 2 cut(s) 451, 1137
HindIII AAGCTT 2 cut(s) 542, 685
HpaII CCGG 5 cut(s) 619, 974, 1611, 2290, 2296
HphI GGTGA 5 cut(s) 294, 1498, 1841, 2588, 3045
Hpy188I TCNGA 7 cut(s) 252, 283, 523, 906, 1250, 1915, 3046
Hpy99I CGWCG 1 cut(s) 854
HpyCH4III ACNGT 5 cut(s) 500, 1214, 2723, 2789, 3101
HpyCH4IV ACGT 2 cut(s) 657, 2995
HpyF10VI GCNNNNNNNGC 7 cut(s) 363, 1644, 2163, 2328, 2861, 2894, 3177
HpySE526I ACGT 2 cut(s) 657, 2995
Hsp92I GRCGYC 1 cut(s) 1254
HspAI GCGC 2 cut(s) 403, 1254
KasI GGCGCC 1 cut(s) 1253
Kpn2I TCCGGA 2 cut(s) 618, 973
KpnI GGTACC 1 cut(s) 1838
Ksp22I TGATCA 3 cut(s) 385, 2188, 3129
LguI GCTCTTC 1 cut(s) 2862
LmnI GCTCC 5 cut(s) 4, 1847, 2243, 2330, 2677
Lsp1109I GCAGC 8 cut(s) 1074, 1275, 1989, 2309, 2391, 2656, 2839, 2900
LweI GCATC 4 cut(s) 256, 594, 1982, 2708
MaeI CTAG 6 cut(s) 176, 839, 1010, 1823, 2870, 3225
MaeII ACGT 2 cut(s) 657, 2995
MaeIII GTNAC 2 cut(s) 419, 1278
MfeI CAATTG 2 cut(s) 1057, 2640
MflI RGATCY 3 cut(s) 967, 976, 2310
MhlI GDGCHC 1 cut(s) 3044
Mly113I GGCGCC 1 cut(s) 1254
MlyI GAGTC 6 cut(s) 194, 484, 773, 2060, 2589, 2624
MmeI TCCRAC 3 cut(s) 411, 1116, 1861
MroI TCCGGA 2 cut(s) 618, 973
MroXI GAANNNNTTC 3 cut(s) 83, 607, 1018
MseI TTAA 8 cut(s) 39, 57, 747, 792, 909, 1217, 2811, 3250
MslI CAYNNNNRTG 4 cut(s) 1358, 2574, 2996, 2998
MspCI CTTAAG 1 cut(s) 791
MspI CCGG 5 cut(s) 619, 974, 1611, 2290, 2296
MspR9I CCNGG 2 cut(s) 1232, 2826
MunI CAATTG 2 cut(s) 1057, 2640
Mva1269I GAATGC 1 cut(s) 2273
MvaI CCWGG 2 cut(s) 1232, 2826
MwoI GCNNNNNNNGC 7 cut(s) 363, 1644, 2163, 2328, 2861, 2894, 3177
NarI GGCGCC 1 cut(s) 1254
NcoI CCATGG 1 cut(s) 336
NlaIV GGNNCC 7 cut(s) 295, 1090, 1255, 1836, 1849, 2294, 3092
NmuCI GTSAC 1 cut(s) 419
NspI RCATGY 5 cut(s) 430, 829, 1935, 2322, 2920
NspV TTCGAA 1 cut(s) 1855
OliI CACNNNNGTG 3 cut(s) 1358, 2996, 2998
PaeI GCATGC 1 cut(s) 1935
PagI TCATGA 2 cut(s) 10, 2491
PceI AGGCCT 1 cut(s) 819
PciI ACATGT 1 cut(s) 426
PciSI GCTCTTC 1 cut(s) 2862
PcsI WCGNNNNNNNCGW 1 cut(s) 2688
PctI GAATGC 1 cut(s) 2273
PdmI GAANNNNTTC 3 cut(s) 83, 607, 1018
PfeI GAWTC 8 cut(s) 155, 1330, 1672, 2127, 2182, 2299, 2731, 3050
PflMI CCANNNNNTGG 1 cut(s) 1415
PkrI GCNGC 9 cut(s) 239, 1064, 1290, 2004, 2324, 2406, 2671, 2854, 2890
PleI GAGTC 6 cut(s) 194, 483, 772, 2060, 2589, 2623
PluTI GGCGCC 1 cut(s) 1257
PmaCI CACGTG 1 cut(s) 2996
PmlI CACGTG 1 cut(s) 2996
PpsI GAGTC 6 cut(s) 194, 483, 772, 2060, 2589, 2623
Ppu21I YACGTR 1 cut(s) 2996
PpuMI RGGWCCY 1 cut(s) 3091
PscI ACATGT 1 cut(s) 426
PshBI ATTAAT 1 cut(s) 909
PsiI TTATAA 3 cut(s) 1043, 2931, 2970
Psp1406I AACGTT 1 cut(s) 657
Psp5II RGGWCCY 1 cut(s) 3091
Psp6I CCWGG 2 cut(s) 1230, 2824
PspCI CACGTG 1 cut(s) 2996
PspGI CCWGG 2 cut(s) 1230, 2824
PspN4I GGNNCC 7 cut(s) 295, 1090, 1255, 1836, 1849, 2294, 3092
PspPI GGNCC 4 cut(s) 333, 340, 1228, 3091
PspPPI RGGWCCY 1 cut(s) 3091
PsrI GAACNNNNNNTAC 2 cut(s) 933, 965
PstI CTGCAG 3 cut(s) 2266, 2890, 2899
PstNI CAGNNNCTG 1 cut(s) 2894
PsuI RGATCY 3 cut(s) 967, 976, 2310
RsaI GTAC 8 cut(s) 915, 1687, 1727, 1836, 2020, 2172, 2347, 2681
RsaNI GTAC 8 cut(s) 914, 1686, 1726, 1835, 2019, 2171, 2346, 2680
RseI CAYNNNNRTG 4 cut(s) 1358, 2574, 2996, 2998
SapI GCTCTTC 1 cut(s) 2862
SaqAI TTAA 8 cut(s) 39, 57, 747, 792, 909, 1217, 2811, 3250
SatI GCNGC 9 cut(s) 238, 1063, 1289, 2003, 2323, 2405, 2670, 2853, 2889
Sau96I GGNCC 4 cut(s) 333, 340, 1228, 3091
ScaI AGTACT 1 cut(s) 1727
SchI GAGTC 6 cut(s) 194, 484, 773, 2060, 2589, 2624
ScrFI CCNGG 2 cut(s) 1232, 2826
SduI GDGCHC 1 cut(s) 3044
SfaNI GCATC 4 cut(s) 256, 594, 1982, 2708
SfcI CTRYAG 4 cut(s) 1122, 2262, 2886, 2895
SfoI GGCGCC 1 cut(s) 1255
SfuI TTCGAA 1 cut(s) 1855
SinI GGWCC 3 cut(s) 333, 340, 3091
SmiMI CAYNNNNRTG 4 cut(s) 1358, 2574, 2996, 2998
SmlI CTYRAG 3 cut(s) 241, 560, 791
SmoI CTYRAG 3 cut(s) 241, 560, 791
SphI GCATGC 1 cut(s) 1935
SseBI AGGCCT 1 cut(s) 819
SsiI CCGC 4 cut(s) 237, 397, 855, 2157
SspDI GGCGCC 1 cut(s) 1253
SspI AATATT 3 cut(s) 370, 2455, 3021
SspMI CTAG 6 cut(s) 176, 839, 1010, 1823, 2870, 3225
StuI AGGCCT 1 cut(s) 819
StyD4I CCNGG 2 cut(s) 1230, 2824
StyI CCWWGG 7 cut(s) 17, 336, 526, 597, 1050, 1224, 1875
TaaI ACNGT 5 cut(s) 500, 1214, 2723, 2789, 3101
TaiI ACGT 2 cut(s) 660, 2998
TaqI TCGA 6 cut(s) 822, 1371, 1855, 1902, 2072, 3136
TatI WGTACW 3 cut(s) 913, 1725, 2170
TauI GCSGC 1 cut(s) 240
TfiI GAWTC 8 cut(s) 155, 1330, 1672, 2127, 2182, 2299, 2731, 3050
Tru1I TTAA 8 cut(s) 39, 57, 747, 792, 909, 1217, 2811, 3250
Tru9I TTAA 8 cut(s) 39, 57, 747, 792, 909, 1217, 2811, 3250
TscAI CASTG 8 cut(s) 172, 316, 989, 997, 1590, 2266, 2525, 2773
TseFI GTSAC 1 cut(s) 419
TseI GCWGC 8 cut(s) 1062, 1288, 2002, 2322, 2404, 2669, 2852, 2888
Tsp45I GTSAC 1 cut(s) 419
TspGWI ACGGA 2 cut(s) 1499, 1756
TspRI CASTG 8 cut(s) 172, 316, 989, 997, 1590, 2266, 2525, 2773
Van91I CCANNNNNTGG 1 cut(s) 1415
Vha464I CTTAAG 1 cut(s) 791
VpaK11BI GGWCC 3 cut(s) 333, 340, 3091
VspI ATTAAT 1 cut(s) 909
XapI RAATTY 6 cut(s) 146, 1617, 1761, 1916, 1955, 2351
XbaI TCTAGA 1 cut(s) 1822
XceI RCATGY 5 cut(s) 430, 829, 1935, 2322, 2920
XcmI CCANNNNNNNNNTGG 1 cut(s) 3214
XmiI GTMKAC 3 cut(s) 2718, 3010, 3103
XmnI GAANNNNTTC 3 cut(s) 83, 607, 1018
XspI CTAG 6 cut(s) 176, 839, 1010, 1823, 2870, 3225
ZrmI AGTACT 1 cut(s) 1727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.