Rorug01G0355300
ERF Family

Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000169
Physical Location & Seq
Forward (+)
47181815 .. 47188562
6748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0355300.1

Sequence Viewer

Length: 1080 bp
ATGACCTCGCTACCGTATGCTGACGTGGATTCCCATCTGAAAGCAATGGCCGGCCGGGCCGAGGGGTTCGGCCGGCTCGCCATCGGAGGCCTCCACGGCCCGGTTTATTTCGTCACCACATTGGCAGATGATGGTCCAGGCTCACTTCGTGAAGGATGCCGGAAACAAGAACCACTTTGGATTGTCTTTGAGGTTTCAGGCACCATTATTCTCTCTTCTTACTTAAGTGTGTCGTCTTACAAGACAATTGATGGCCGAGGGCAGAGAGTAAAGCTCACAGGCAAGGGCCTTAGACTGAAGGAATGTGAACACATAATCATATGCAACCTTGAGTTCGAAGGTGGTAGAGGACATGATGTTGATGGCATTCAGATAAAACCAAATTCCAGGCATATATGGATTGACCGATGCAGCCTTCGTGATTATGATGATGGACTCATAGATATCACCCGACAAAGTACAGACATAACTATTTCTAGATGTTACTTCCATCAACATGACAAGACGATGCTTATTGGAGCAGACCCTTCACATGTTGGTGACAGATGCATTCGGGTCACTATTCATCATTGTTTTTTTGATGGGACAAGGCAAAGGCAACCTCGTGTTAGATTTGGGAAAGTTCATCTTTACAACAATTACACTCGTAACTGGGGTATATATGCTGTTTGTGCCAGCGTAGAATCCCAGATATACTCTCAATGCAACATATATGAAGCAGGAACGAAGAAGAAGACTTTTGAATATTATACGGAAAAGGCTGCAGACAGAGAAGAGGCGAAATCTGGCTTCATAAGATCTGAGGGGGACGTATTCCTGAATGGAGCCCAACCATACACATTAACAGGGTTCAGTGAAGAATGCATGTTCCATCCAAGTGAATTTTATCCACTTTGGACTATGGAAGCAGCCTCAGATTCTCTTAAAGGTGTTCTCCACATTCTTACGGGTTGGCAATCCATTCATAGGCCACCAGTAGAGCAGCTGGTAATGAGAGGGAGGCAGCTCCTCGGAGGTAATGATGAAGATGCTGTAGAACTGACTAAGGTAGAAGTCCCGTGGAACAAATCCGACAAGTAA

Protein Analysis

359

Amino Acids

40.58

Weight (kDa)

6.54

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pectate_lyase_4 PF00544 75 - 245 8.8e-29 Pectate lyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 200
AcoI YGGCCR 4 cut(s) 48, 52, 70, 253
AcsI RAATTY 2 cut(s) 382, 881
AcuI CTGAAG 1 cut(s) 317
AdeI CACNNNGTG 1 cut(s) 149
AfaI GTAC 1 cut(s) 460
AfiI CCNNNNNNNGG 3 cut(s) 61, 100, 966
AflII CTTAAG 1 cut(s) 223
AflIII ACRYGT 1 cut(s) 532
AgsI TTSAA 1 cut(s) 743
AjiI CACGTC 1 cut(s) 25
AjnI CCWGG 2 cut(s) 136, 386
AluBI AGCT 3 cut(s) 274, 985, 1006
AluI AGCT 3 cut(s) 274, 985, 1006
AoxI GGCC 9 cut(s) 48, 52, 57, 70, 88, 97, 253, 286, 968
ApeKI GCWGC 5 cut(s) 411, 761, 908, 982, 1003
ApoI RAATTY 2 cut(s) 382, 881
AspS9I GGNCC 4 cut(s) 57, 98, 134, 286
AsuC2I CCSGG 2 cut(s) 56, 101
AsuHPI GGTGA 3 cut(s) 106, 439, 551
AsuII TTCGAA 1 cut(s) 336
AvaII GGWCC 1 cut(s) 134
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 1 cut(s) 829
BauI CACGAG 1 cut(s) 603
BbsI GAAGAC 1 cut(s) 740
BbvI GCAGC 5 cut(s) 423, 748, 920, 994, 1015
BccI CCATC 9 cut(s) 42, 89, 125, 245, 356, 425, 498, 575, 879
BceAI ACGGC 1 cut(s) 112
BciT130I CCWGG 2 cut(s) 138, 388
BcnI CCSGG 2 cut(s) 56, 101
BfaI CTAG 1 cut(s) 477
BfmI CTRYAG 2 cut(s) 762, 1032
BfrI CTTAAG 1 cut(s) 223
BglI GCCNNNNNGGC 2 cut(s) 56, 96
BglII AGATCT 1 cut(s) 797
BisI GCNGC 5 cut(s) 412, 762, 909, 983, 1004
BlsI GCNGC 5 cut(s) 413, 763, 910, 984, 1005
Bme1390I CCNGG 4 cut(s) 56, 101, 138, 388
Bme18I GGWCC 1 cut(s) 134
BmgBI CACGTC 1 cut(s) 25
BmgT120I GGNCC 4 cut(s) 57, 98, 134, 286
BmiI GGNNCC 2 cut(s) 202, 826
BmrFI CCNGG 4 cut(s) 56, 101, 138, 388
BmrI ACTGGG 1 cut(s) 661
BmsI GCATC 5 cut(s) 146, 398, 498, 536, 1018
BmuI ACTGGG 1 cut(s) 661
BpiI GAAGAC 1 cut(s) 740
BplI GAGNNNNNCTC 2 cut(s) 258, 290
Bpu14I TTCGAA 1 cut(s) 336
BpuEI CTTGAG 1 cut(s) 350
BpuMI CCSGG 2 cut(s) 56, 101
BsaBI GATNNNNATC 1 cut(s) 33
BsaJI CCNNGG 5 cut(s) 60, 94, 256, 1009, 1058
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 100, 966
Bse118I RCCGGY 2 cut(s) 50, 72
Bse1I ACTGG 2 cut(s) 656, 974
Bse3DI GCAATG 1 cut(s) 51
Bse8I GATNNNNATC 1 cut(s) 33
BseBI CCWGG 2 cut(s) 138, 388
BseDI CCNNGG 5 cut(s) 60, 94, 256, 1009, 1058
BseGI GGATG 2 cut(s) 161, 871
BseJI GATNNNNATC 1 cut(s) 33
BseLI CCNNNNNNNGG 3 cut(s) 61, 100, 966
BseMI GCAATG 1 cut(s) 51
BseMII CTCAG 2 cut(s) 792, 927
BseNI ACTGG 2 cut(s) 656, 974
BseRI GAGGAG 1 cut(s) 998
BseX3I CGGCCG 2 cut(s) 52, 70
BseXI GCAGC 5 cut(s) 423, 748, 920, 994, 1015
Bsh1285I CGRYCG 2 cut(s) 55, 73
BshFI GGCC 9 cut(s) 50, 54, 59, 72, 90, 99, 255, 288, 970
BshNI GGYRCC 1 cut(s) 200
BsiEI CGRYCG 2 cut(s) 55, 73
BsiSI CCGG 5 cut(s) 51, 55, 73, 101, 160
BslFI GGGAC 3 cut(s) 598, 821, 1040
BslI CCNNNNNNNGG 3 cut(s) 61, 100, 966
BsmFI GGGAC 3 cut(s) 598, 821, 1040
BsmI GAATGC 3 cut(s) 366, 549, 866
BsnI GGCC 9 cut(s) 50, 54, 59, 72, 90, 99, 255, 288, 970
Bsp119I TTCGAA 1 cut(s) 336
Bsp1286I GDGCHC 1 cut(s) 829
Bsp143I GATC 1 cut(s) 797
BspANI GGCC 9 cut(s) 50, 54, 59, 72, 90, 99, 255, 288, 970
BspCNI CTCAG 2 cut(s) 793, 926
BspLI GGNNCC 2 cut(s) 202, 826
BspMAI CTGCAG 1 cut(s) 766
BspT104I TTCGAA 1 cut(s) 336
BspT107I GGYRCC 1 cut(s) 200
BspTI CTTAAG 1 cut(s) 223
BsrDI GCAATG 1 cut(s) 51
BsrFI RCCGGY 2 cut(s) 50, 72
BsrI ACTGG 2 cut(s) 656, 974
BssAI RCCGGY 2 cut(s) 50, 72
BssECI CCNNGG 5 cut(s) 60, 94, 256, 1009, 1058
BssMI GATC 1 cut(s) 797
BssSI CACGAG 1 cut(s) 603
Bst2BI CACGAG 1 cut(s) 603
Bst2UI CCWGG 2 cut(s) 138, 388
Bst4CI ACNGT 1 cut(s) 15
Bst6I CTCTTC 2 cut(s) 220, 768
BstAFI CTTAAG 1 cut(s) 223
BstBI TTCGAA 1 cut(s) 336
BstC8I GCNNGC 4 cut(s) 52, 74, 78, 676
BstDEI CTNAG 4 cut(s) 290, 801, 913, 1044
BstDSI CCRYGG 2 cut(s) 94, 1058
BstF5I GGATG 2 cut(s) 161, 871
BstKTI GATC 1 cut(s) 800
BstMBI GATC 1 cut(s) 797
BstMCI CGRYCG 2 cut(s) 55, 73
BstMWI GCNNNNNNNGC 3 cut(s) 56, 96, 671
BstNI CCWGG 2 cut(s) 138, 388
BstNSI RCATGY 2 cut(s) 536, 868
BstSCI CCNGG 4 cut(s) 54, 99, 136, 386
BstSFI CTRYAG 2 cut(s) 762, 1032
BstV1I GCAGC 5 cut(s) 423, 748, 920, 994, 1015
BstV2I GAAGAC 1 cut(s) 740
BstX2I RGATCY 1 cut(s) 797
BstYI RGATCY 1 cut(s) 797
BstZI CGGCCG 2 cut(s) 52, 70
BsuRI GGCC 9 cut(s) 50, 54, 59, 72, 90, 99, 255, 288, 970
BtgI CCRYGG 2 cut(s) 94, 1058
BtrI CACGTC 1 cut(s) 25
BtsCI GGATG 2 cut(s) 161, 871
BtsIMutI CAGTG 1 cut(s) 859
Cac8I GCNNGC 4 cut(s) 52, 74, 78, 676
Cfr10I RCCGGY 2 cut(s) 50, 72
Cfr13I GGNCC 4 cut(s) 57, 98, 134, 286
Csp6I GTAC 1 cut(s) 459
CviAII CATG 4 cut(s) 353, 497, 533, 865
CviQI GTAC 1 cut(s) 459
DdeI CTNAG 4 cut(s) 290, 801, 913, 1044
DpnI GATC 1 cut(s) 799
DpnII GATC 1 cut(s) 797
DraIII CACNNNGTG 1 cut(s) 149
EaeI YGGCCR 4 cut(s) 48, 52, 70, 253
EagI CGGCCG 2 cut(s) 52, 70
Eam1104I CTCTTC 2 cut(s) 220, 768
EarI CTCTTC 2 cut(s) 220, 768
EclXI CGGCCG 2 cut(s) 52, 70
Eco147I AGGCCT 1 cut(s) 90
Eco24I GRGCYC 1 cut(s) 829
Eco32I GATATC 1 cut(s) 445
Eco47I GGWCC 1 cut(s) 134
Eco52I CGGCCG 2 cut(s) 52, 70
Eco57I CTGAAG 1 cut(s) 317
EcoO109I RGGNCCY 1 cut(s) 286
EcoRII CCWGG 2 cut(s) 136, 386
EcoRV GATATC 1 cut(s) 445
EcoT22I ATGCAT 2 cut(s) 551, 866
EcoT38I GRGCYC 1 cut(s) 829
FaeI CATG 4 cut(s) 356, 500, 536, 868
FalI AAGNNNNNCTT 4 cut(s) 159, 191, 612, 644
FaqI GGGAC 3 cut(s) 598, 821, 1040
FatI CATG 4 cut(s) 352, 496, 532, 864
FauNDI CATATG 1 cut(s) 320
Fnu4HI GCNGC 5 cut(s) 412, 762, 909, 983, 1004
FokI GGATG 2 cut(s) 168, 858
FriOI GRGCYC 1 cut(s) 829
FseI GGCCGGCC 1 cut(s) 54
Fsp4HI GCNGC 5 cut(s) 412, 762, 909, 983, 1004
FspBI CTAG 1 cut(s) 477
GluI GCNGC 5 cut(s) 412, 762, 909, 983, 1004
HaeIII GGCC 9 cut(s) 50, 54, 59, 72, 90, 99, 255, 288, 970
HapII CCGG 5 cut(s) 51, 55, 73, 101, 160
Hin1II CATG 4 cut(s) 356, 500, 536, 868
HinfI GANTC 4 cut(s) 29, 435, 683, 917
HpaII CCGG 5 cut(s) 51, 55, 73, 101, 160
HphI GGTGA 3 cut(s) 106, 439, 551
Hpy166II GTNNAC 1 cut(s) 308
Hpy188I TCNGA 7 cut(s) 39, 86, 372, 802, 916, 1013, 1072
Hpy188III TCNNGA 4 cut(s) 149, 419, 477, 817
Hpy8I GTNNAC 1 cut(s) 308
HpyAV CCTTC 5 cut(s) 146, 292, 332, 425, 537
HpyCH4III ACNGT 1 cut(s) 15
HpyCH4IV ACGT 2 cut(s) 24, 810
HpyCH4V TGCA 6 cut(s) 324, 411, 549, 705, 764, 864
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 96, 671
HpyF3I CTNAG 4 cut(s) 290, 801, 913, 1044
HpySE526I ACGT 2 cut(s) 24, 810
Hsp92II CATG 4 cut(s) 356, 500, 536, 868
KroI GCCGGC 2 cut(s) 50, 72
KroNI GCCGGC 2 cut(s) 52, 74
Kzo9I GATC 1 cut(s) 797
LmnI GCTCC 3 cut(s) 518, 824, 1011
Lsp1109I GCAGC 5 cut(s) 423, 748, 920, 994, 1015
LweI GCATC 5 cut(s) 146, 398, 498, 536, 1018
MaeI CTAG 1 cut(s) 477
MaeII ACGT 2 cut(s) 24, 810
MaeIII GTNAC 5 cut(s) 112, 482, 539, 556, 647
MalI GATC 1 cut(s) 799
MboI GATC 1 cut(s) 797
MboII GAAGA 7 cut(s) 207, 739, 742, 745, 785, 869, 1037
MfeI CAATTG 1 cut(s) 246
MflI RGATCY 1 cut(s) 797
MhlI GDGCHC 1 cut(s) 829
MluCI AATT 4 cut(s) 246, 382, 637, 881
MlyI GAGTC 1 cut(s) 429
Mph1103I ATGCAT 2 cut(s) 551, 866
MroNI GCCGGC 2 cut(s) 50, 72
MseI TTAA 3 cut(s) 224, 842, 924
MslI CAYNNNNRTG 3 cut(s) 495, 537, 876
MspA1I CMGCKG 1 cut(s) 985
MspCI CTTAAG 1 cut(s) 223
MspI CCGG 5 cut(s) 51, 55, 73, 101, 160
MspR9I CCNGG 4 cut(s) 56, 101, 138, 388
MunI CAATTG 1 cut(s) 246
Mva1269I GAATGC 3 cut(s) 366, 549, 866
MvaI CCWGG 2 cut(s) 138, 388
MwoI GCNNNNNNNGC 3 cut(s) 56, 96, 671
NaeI GCCGGC 2 cut(s) 52, 74
NciI CCSGG 2 cut(s) 56, 101
NdeI CATATG 1 cut(s) 320
NdeII GATC 1 cut(s) 797
NgoMIV GCCGGC 2 cut(s) 50, 72
NlaIII CATG 4 cut(s) 356, 500, 536, 868
NlaIV GGNNCC 2 cut(s) 202, 826
NmeAIII GCCGAG 2 cut(s) 85, 281
NmuCI GTSAC 3 cut(s) 112, 539, 556
NsiI ATGCAT 2 cut(s) 551, 866
NspI RCATGY 2 cut(s) 536, 868
NspV TTCGAA 1 cut(s) 336
PceI AGGCCT 1 cut(s) 90
PciI ACATGT 1 cut(s) 532
PctI GAATGC 3 cut(s) 366, 549, 866
PdiI GCCGGC 2 cut(s) 52, 74
PfeI GAWTC 3 cut(s) 29, 683, 917
PkrI GCNGC 5 cut(s) 413, 763, 910, 984, 1005
PleI GAGTC 1 cut(s) 429
PpsI GAGTC 1 cut(s) 429
PscI ACATGT 1 cut(s) 532
Psp6I CCWGG 2 cut(s) 136, 386
PspGI CCWGG 2 cut(s) 136, 386
PspN4I GGNNCC 2 cut(s) 202, 826
PspPI GGNCC 4 cut(s) 57, 98, 134, 286
PstI CTGCAG 1 cut(s) 766
PsuI RGATCY 1 cut(s) 797
PvuII CAGCTG 1 cut(s) 985
RigI GGCCGGCC 1 cut(s) 54
RsaI GTAC 1 cut(s) 460
RsaNI GTAC 1 cut(s) 459
RseI CAYNNNNRTG 3 cut(s) 495, 537, 876
SaqAI TTAA 3 cut(s) 224, 842, 924
SatI GCNGC 5 cut(s) 412, 762, 909, 983, 1004
Sau3AI GATC 1 cut(s) 797
Sau96I GGNCC 4 cut(s) 57, 98, 134, 286
SchI GAGTC 1 cut(s) 429
ScrFI CCNGG 4 cut(s) 56, 101, 138, 388
SduI GDGCHC 1 cut(s) 829
SfaNI GCATC 5 cut(s) 146, 398, 498, 536, 1018
SfcI CTRYAG 2 cut(s) 762, 1032
SfiI GGCCNNNNNGGCC 2 cut(s) 56, 96
SfuI TTCGAA 1 cut(s) 336
SinI GGWCC 1 cut(s) 134
SmiMI CAYNNNNRTG 3 cut(s) 495, 537, 876
SmlI CTYRAG 2 cut(s) 223, 329
SmoI CTYRAG 2 cut(s) 223, 329
Sse9I AATT 4 cut(s) 246, 382, 637, 881
SseBI AGGCCT 1 cut(s) 90
SspI AATATT 1 cut(s) 746
SspMI CTAG 1 cut(s) 477
StuI AGGCCT 1 cut(s) 90
StyD4I CCNGG 4 cut(s) 54, 99, 136, 386
TaaI ACNGT 1 cut(s) 15
TaiI ACGT 2 cut(s) 27, 813
TaqI TCGA 1 cut(s) 336
TaqII GACCGA 1 cut(s) 420
TasI AATT 4 cut(s) 246, 382, 637, 881
TatI WGTACW 1 cut(s) 458
TfiI GAWTC 3 cut(s) 29, 683, 917
Tru1I TTAA 3 cut(s) 224, 842, 924
Tru9I TTAA 3 cut(s) 224, 842, 924
TscAI CASTG 1 cut(s) 859
TseFI GTSAC 3 cut(s) 112, 539, 556
TseI GCWGC 5 cut(s) 411, 761, 908, 982, 1003
Tsp45I GTSAC 3 cut(s) 112, 539, 556
TspDTI ATGAA 6 cut(s) 554, 614, 729, 781, 953, 1038
TspGWI ACGGA 1 cut(s) 767
TspRI CASTG 1 cut(s) 859
Vha464I CTTAAG 1 cut(s) 223
VpaK11BI GGWCC 1 cut(s) 134
XapI RAATTY 2 cut(s) 382, 881
XbaI TCTAGA 1 cut(s) 476
XceI RCATGY 2 cut(s) 536, 868
XspI CTAG 1 cut(s) 477
Zsp2I ATGCAT 2 cut(s) 551, 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.