Rmu_sc0000621.1_g000030

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000621.1
OG0000169
Physical Location & Seq
Forward (+)
163524 .. 164807
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000621.1_g000030.1.cds

Sequence Viewer

Length: 1284 bp
atggcatccattgacgcggtaacggcgagttttgctgcctcgcttgccctggccgaagggggacgcgcccctgacctagggaagatcggcggaggtccagtgcggaagtcctcccaatcttttctcctcggaaagcctttgactcgaaaacccatagacccaaaggcattcatgtctcacttccaccgaacctggctggtggataaggattttagggttcaagagcatcttggggacctgttcttgttctctttcgctcctgcaagtgatcgaaacaaggttcttcgaggaggcgtatggtgttttgatcgagccccggtctgttttgaagtgtacgatggagtcaagcctctgcatgaacttccgtttaaacatctgcggatctggactagggtttctggcatacctcctctgtatgaagaacccgagaagctcaccttgattggcacccttttgggtggttttttggagtatgacaagaaggaatttaagaagggggtgattagggttttattcactcatgacatatctaaaacgatcctgctggaaagacaagtcttcctagatactggggttgaacccatattgcagtttcaattcgaacatctgcgggggagatgcactcaatgtggtttgctcacacatgctggcctttcttgtgaggaacccactgcagtaaaccctacacctagggttttacactttcccggagtttcgacctcaaggaattcctttgcattctctgctaagcatcagggagaccttctctctccttccccgactgtcccaaggaagaagcggcctggttttcatcgagtggagcgcctgacctcagagctttcttctcctagtgagtcggctccaacagtagtcaatactggggtggcagccattactttaccgcacggtttggagggtaatgaggttcccgaactggctatttctagtgacactgttattactccaggtacacagaagcaccagcctgctttgccgtccaaaaagcgggagcgtggtggtgcttgccatcctagtcccaagaagtttaaaacaatcttgggtggcaagattccaacactgcatgttgaggcacttggtctcattgaggaggatggcgacctcactttggtctcgttgaaaaagaagtctggtaggcctcttggaagcaagaataagactcaacgtgcaaacaagaagctggatggtactccaatgaagattacttatcctactagtactgaaactggtcctagccctagggtcaagggcaaaggaaagatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

427

Amino Acids

46.7

Weight (kDa)

9.68

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 446
AccII CGCG 2 cut(s) 17, 66
AciI CCGC 8 cut(s) 17, 90, 103, 379, 610, 799, 902, 1006
AclWI GGATC 2 cut(s) 389, 532
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 2 cut(s) 485, 727
AfaI GTAC 4 cut(s) 335, 970, 1207, 1237
AfiI CCNNNNNNNGG 3 cut(s) 77, 1005, 1126
AgsI TTSAA 5 cut(s) 221, 329, 578, 596, 1138
AhlI ACTAGT 1 cut(s) 1232
AjnI CCWGG 4 cut(s) 48, 191, 802, 964
AluBI AGCT 3 cut(s) 433, 838, 1198
AluI AGCT 3 cut(s) 433, 838, 1198
Alw26I GTCTC 4 cut(s) 180, 753, 1103, 1135
AlwI GGATC 2 cut(s) 389, 532
Ama87I CYCGRG 1 cut(s) 425
AoxI GGCC 4 cut(s) 51, 649, 800, 1154
ApeKI GCWGC 2 cut(s) 35, 887
ApoI RAATTY 2 cut(s) 485, 727
AspA2I CCTAGG 3 cut(s) 76, 689, 1256
AspLEI GCGC 2 cut(s) 68, 825
AspS9I GGNCC 3 cut(s) 95, 235, 1247
AsuC2I CCSGG 2 cut(s) 317, 708
AsuHPI GGTGA 2 cut(s) 427, 511
AsuII TTCGAA 1 cut(s) 600
AvaI CYCGRG 1 cut(s) 425
AvaII GGWCC 3 cut(s) 95, 235, 1247
AvrII CCTAGG 3 cut(s) 76, 689, 1256
BaeI ACNNNNGTAYC 2 cut(s) 558, 591
BanI GGYRCC 1 cut(s) 446
BanII GRGCYC 1 cut(s) 316
BbsI GAAGAC 1 cut(s) 550
BbvI GCAGC 2 cut(s) 22, 899
BccI CCATC 4 cut(s) 332, 1035, 1106, 1196
BceAI ACGGC 2 cut(s) 39, 979
BciT130I CCWGG 4 cut(s) 50, 193, 804, 966
BcnI CCSGG 2 cut(s) 317, 708
BcoDI GTCTC 4 cut(s) 180, 753, 1103, 1135
BcuI ACTAGT 1 cut(s) 1232
BfmI CTRYAG 1 cut(s) 672
BfoI RGCGCY 1 cut(s) 826
BisI GCNGC 3 cut(s) 36, 800, 888
BlnI CCTAGG 3 cut(s) 76, 689, 1256
BlpI GCTNAGC 1 cut(s) 747
BlsI GCNGC 3 cut(s) 37, 801, 889
BmcAI AGTACT 1 cut(s) 1237
Bme1390I CCNGG 6 cut(s) 50, 193, 317, 708, 804, 966
Bme18I GGWCC 3 cut(s) 95, 235, 1247
BmeT110I CYCGRG 1 cut(s) 425
BmgT120I GGNCC 3 cut(s) 95, 235, 1247
BmiI GGNNCC 5 cut(s) 236, 448, 666, 861, 927
BmrFI CCNGG 6 cut(s) 50, 193, 317, 708, 804, 966
BmrI ACTGGG 2 cut(s) 579, 888
BmsI GCATC 4 cut(s) 14, 235, 608, 760
BmuI ACTGGG 2 cut(s) 579, 888
BpiI GAAGAC 1 cut(s) 550
BplI GAGNNNNNCTC 4 cut(s) 607, 639, 750, 782
BpmI CTGGAG 1 cut(s) 948
Bpu1102I GCTNAGC 1 cut(s) 747
Bpu14I TTCGAA 1 cut(s) 600
BpuEI CTTGAG 1 cut(s) 706
BpuMI CCSGG 2 cut(s) 317, 708
BsaI GGTCTC 3 cut(s) 753, 1103, 1135
BsaJI CCNNGG 7 cut(s) 48, 76, 127, 315, 689, 788, 1256
BsaXI ACNNNNNCTCC 2 cut(s) 84, 114
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 1005, 1126
Bse1I ACTGG 5 cut(s) 98, 574, 883, 939, 1249
BseBI CCWGG 4 cut(s) 50, 193, 804, 966
BseDI CCNNGG 7 cut(s) 48, 76, 127, 315, 689, 788, 1256
BseGI GGATG 4 cut(s) 5, 1027, 1117, 1207
BseLI CCNNNNNNNGG 3 cut(s) 77, 1005, 1126
BseMII CTCAG 1 cut(s) 846
BseNI ACTGG 5 cut(s) 98, 574, 883, 939, 1249
BseRI GAGGAG 4 cut(s) 116, 303, 399, 1121
BseXI GCAGC 2 cut(s) 22, 899
Bsh1236I CGCG 2 cut(s) 17, 66
BshFI GGCC 4 cut(s) 53, 651, 802, 1156
BshNI GGYRCC 1 cut(s) 446
BsiHKCI CYCGRG 1 cut(s) 425
BsiSI CCGG 2 cut(s) 317, 708
BslFI GGGAC 4 cut(s) 75, 248, 770, 1020
BslI CCNNNNNNNGG 3 cut(s) 77, 1005, 1126
BsmAI GTCTC 4 cut(s) 180, 753, 1103, 1135
BsmFI GGGAC 4 cut(s) 75, 248, 770, 1020
BsmI GAATGC 2 cut(s) 167, 737
BsnI GGCC 4 cut(s) 53, 651, 802, 1156
Bso31I GGTCTC 3 cut(s) 753, 1103, 1135
BsoBI CYCGRG 1 cut(s) 425
Bsp119I TTCGAA 1 cut(s) 600
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 5 cut(s) 84, 268, 307, 381, 537
Bsp1720I GCTNAGC 1 cut(s) 747
BspACI CCGC 8 cut(s) 17, 90, 103, 379, 610, 799, 902, 1006
BspANI GGCC 4 cut(s) 53, 651, 802, 1156
BspCNI CTCAG 1 cut(s) 845
BspFNI CGCG 2 cut(s) 17, 66
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 5 cut(s) 236, 448, 666, 861, 927
BspMAI CTGCAG 1 cut(s) 676
BspPI GGATC 2 cut(s) 389, 532
BspT104I TTCGAA 1 cut(s) 600
BspT107I GGYRCC 1 cut(s) 446
BspTNI GGTCTC 3 cut(s) 753, 1103, 1135
BsrI ACTGG 5 cut(s) 98, 574, 883, 939, 1249
BssECI CCNNGG 7 cut(s) 48, 76, 127, 315, 689, 788, 1256
BssMI GATC 5 cut(s) 84, 268, 307, 381, 537
BssT1I CCWWGG 4 cut(s) 76, 689, 788, 1256
Bst2UI CCWGG 4 cut(s) 50, 193, 804, 966
Bst4CI ACNGT 4 cut(s) 784, 868, 908, 955
BstAPI GCANNNNNTGC 1 cut(s) 743
BstBI TTCGAA 1 cut(s) 600
BstC8I GCNNGC 4 cut(s) 45, 649, 987, 1024
BstDEI CTNAG 2 cut(s) 747, 832
BstENI CCTNNNNNAGG 1 cut(s) 75
BstF5I GGATG 4 cut(s) 5, 1027, 1117, 1207
BstFNI CGCG 2 cut(s) 17, 66
BstH2I RGCGCY 1 cut(s) 826
BstHHI GCGC 2 cut(s) 68, 825
BstKTI GATC 5 cut(s) 87, 271, 310, 384, 540
BstMAI GTCTC 4 cut(s) 180, 753, 1103, 1135
BstMBI GATC 5 cut(s) 84, 268, 307, 381, 537
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 743, 991
BstNI CCWGG 4 cut(s) 50, 193, 804, 966
BstNSI RCATGY 2 cut(s) 647, 1085
BstSCI CCNGG 6 cut(s) 48, 191, 315, 706, 802, 964
BstSFI CTRYAG 1 cut(s) 672
BstUI CGCG 2 cut(s) 17, 66
BstV1I GCAGC 2 cut(s) 22, 899
BstV2I GAAGAC 1 cut(s) 550
BstX2I RGATCY 1 cut(s) 381
BstYI RGATCY 1 cut(s) 381
BsuRI GGCC 4 cut(s) 53, 651, 802, 1156
BtsCI GGATG 4 cut(s) 5, 1027, 1117, 1207
BtsI GCAGTG 2 cut(s) 669, 1076
BtsIMutI CAGTG 4 cut(s) 105, 669, 951, 1076
Cac8I GCNNGC 4 cut(s) 45, 649, 987, 1024
CciI TCATGA 1 cut(s) 520
CfoI GCGC 2 cut(s) 68, 825
Cfr13I GGNCC 3 cut(s) 95, 235, 1247
CseI GACGC 2 cut(s) 23, 72
Csp6I GTAC 4 cut(s) 334, 969, 1206, 1236
CviAII CATG 5 cut(s) 172, 356, 521, 644, 1082
CviQI GTAC 4 cut(s) 334, 969, 1206, 1236
DdeI CTNAG 2 cut(s) 747, 832
DpnI GATC 5 cut(s) 86, 270, 309, 383, 539
DpnII GATC 5 cut(s) 84, 268, 307, 381, 537
DraI TTTAAA 2 cut(s) 370, 1048
EaeI YGGCCR 1 cut(s) 51
EciI GGCGGA 1 cut(s) 105
Eco130I CCWWGG 4 cut(s) 76, 689, 788, 1256
Eco147I AGGCCT 1 cut(s) 1156
Eco24I GRGCYC 1 cut(s) 316
Eco31I GGTCTC 3 cut(s) 753, 1103, 1135
Eco47I GGWCC 3 cut(s) 95, 235, 1247
Eco88I CYCGRG 1 cut(s) 425
EcoNI CCTNNNNNAGG 1 cut(s) 75
EcoO109I RGGNCCY 1 cut(s) 235
EcoRI GAATTC 1 cut(s) 727
EcoRII CCWGG 4 cut(s) 48, 191, 802, 964
EcoT14I CCWWGG 4 cut(s) 76, 689, 788, 1256
EcoT38I GRGCYC 1 cut(s) 316
ErhI CCWWGG 4 cut(s) 76, 689, 788, 1256
FaeI CATG 5 cut(s) 175, 359, 524, 647, 1085
FalI AAGNNNNNCTT 4 cut(s) 213, 245, 422, 454
FaqI GGGAC 4 cut(s) 75, 248, 770, 1020
FatI CATG 5 cut(s) 171, 355, 520, 643, 1081
FauI CCCGC 2 cut(s) 603, 999
Fnu4HI GCNGC 3 cut(s) 36, 800, 888
FokI GGATG 3 cut(s) 1014, 1124, 1214
FriOI GRGCYC 1 cut(s) 316
Fsp4HI GCNGC 3 cut(s) 36, 800, 888
GlaI GCGC 2 cut(s) 67, 824
GluI GCNGC 3 cut(s) 36, 800, 888
GsuI CTGGAG 1 cut(s) 948
HaeII RGCGCY 1 cut(s) 826
HaeIII GGCC 4 cut(s) 53, 651, 802, 1156
HapII CCGG 2 cut(s) 317, 708
HgaI GACGC 2 cut(s) 23, 72
HhaI GCGC 2 cut(s) 68, 825
Hin1II CATG 5 cut(s) 175, 359, 524, 647, 1085
Hin6I GCGC 2 cut(s) 66, 823
HinP1I GCGC 2 cut(s) 66, 823
HinfI GANTC 5 cut(s) 142, 342, 854, 1069, 1177
HpaII CCGG 2 cut(s) 317, 708
HphI GGTGA 2 cut(s) 427, 511
Hpy166II GTNNAC 3 cut(s) 334, 679, 971
Hpy188I TCNGA 2 cut(s) 131, 835
Hpy188III TCNNGA 4 cut(s) 221, 385, 521, 929
Hpy8I GTNNAC 3 cut(s) 334, 679, 971
HpyAV CCTTC 5 cut(s) 50, 475, 487, 773, 783
HpyCH4III ACNGT 4 cut(s) 784, 868, 908, 955
HpyCH4IV ACGT 1 cut(s) 1183
HpyCH4V TGCA 8 cut(s) 263, 355, 589, 621, 674, 737, 1081, 1187
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 743, 991
HpyF3I CTNAG 2 cut(s) 747, 832
HpySE526I ACGT 1 cut(s) 1183
Hsp92II CATG 5 cut(s) 175, 359, 524, 647, 1085
HspAI GCGC 2 cut(s) 66, 823
Kzo9I GATC 5 cut(s) 84, 268, 307, 381, 537
LmnI GCTCC 4 cut(s) 262, 820, 865, 1009
Lsp1109I GCAGC 2 cut(s) 22, 899
LweI GCATC 4 cut(s) 14, 235, 608, 760
MaeII ACGT 1 cut(s) 1183
MaeIII GTNAC 2 cut(s) 19, 947
MalI GATC 5 cut(s) 86, 270, 309, 383, 539
MboI GATC 5 cut(s) 84, 268, 307, 381, 537
MboII GAAGA 7 cut(s) 94, 275, 431, 550, 805, 834, 1228
MflI RGATCY 1 cut(s) 381
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 3 cut(s) 485, 596, 727
MlyI GAGTC 4 cut(s) 136, 351, 863, 1171
MmeI TCCRAC 2 cut(s) 887, 1097
MseI TTAA 4 cut(s) 369, 489, 1047, 1282
MspI CCGG 2 cut(s) 317, 708
MspR9I CCNGG 6 cut(s) 50, 193, 317, 708, 804, 966
MssI GTTTAAAC 1 cut(s) 370
Mva1269I GAATGC 2 cut(s) 167, 737
MvaI CCWGG 4 cut(s) 50, 193, 804, 966
MvnI CGCG 2 cut(s) 17, 66
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 743, 991
NciI CCSGG 2 cut(s) 317, 708
NdeII GATC 5 cut(s) 84, 268, 307, 381, 537
NlaIII CATG 5 cut(s) 175, 359, 524, 647, 1085
NlaIV GGNNCC 5 cut(s) 236, 448, 666, 861, 927
NmuCI GTSAC 1 cut(s) 947
NspI RCATGY 2 cut(s) 647, 1085
NspV TTCGAA 1 cut(s) 600
PagI TCATGA 1 cut(s) 520
PceI AGGCCT 1 cut(s) 1156
PctI GAATGC 2 cut(s) 167, 737
PfeI GAWTC 1 cut(s) 1069
PfoI TCCNGGA 1 cut(s) 706
PkrI GCNGC 3 cut(s) 37, 801, 889
PleI GAGTC 4 cut(s) 136, 350, 862, 1171
PmeI GTTTAAAC 1 cut(s) 370
PpsI GAGTC 4 cut(s) 136, 350, 862, 1171
PpuMI RGGWCCY 1 cut(s) 235
Psp5II RGGWCCY 1 cut(s) 235
Psp6I CCWGG 4 cut(s) 48, 191, 802, 964
PspGI CCWGG 4 cut(s) 48, 191, 802, 964
PspN4I GGNNCC 5 cut(s) 236, 448, 666, 861, 927
PspPI GGNCC 3 cut(s) 95, 235, 1247
PspPPI RGGWCCY 1 cut(s) 235
PstI CTGCAG 1 cut(s) 676
PsuI RGATCY 1 cut(s) 381
RsaI GTAC 4 cut(s) 335, 970, 1207, 1237
RsaNI GTAC 4 cut(s) 334, 969, 1206, 1236
SaqAI TTAA 4 cut(s) 369, 489, 1047, 1282
SatI GCNGC 3 cut(s) 36, 800, 888
Sau3AI GATC 5 cut(s) 84, 268, 307, 381, 537
Sau96I GGNCC 3 cut(s) 95, 235, 1247
ScaI AGTACT 1 cut(s) 1237
SchI GAGTC 4 cut(s) 136, 351, 863, 1171
ScrFI CCNGG 6 cut(s) 50, 193, 317, 708, 804, 966
SduI GDGCHC 1 cut(s) 316
SfaNI GCATC 4 cut(s) 14, 235, 608, 760
SfcI CTRYAG 1 cut(s) 672
SfuI TTCGAA 1 cut(s) 600
SinI GGWCC 3 cut(s) 95, 235, 1247
SmlI CTYRAG 1 cut(s) 721
SmoI CTYRAG 1 cut(s) 721
SpeI ACTAGT 1 cut(s) 1232
Sse9I AATT 3 cut(s) 485, 596, 727
SseBI AGGCCT 1 cut(s) 1156
SsiI CCGC 8 cut(s) 17, 90, 103, 379, 610, 799, 902, 1006
StuI AGGCCT 1 cut(s) 1156
StyD4I CCNGG 6 cut(s) 48, 191, 315, 706, 802, 964
StyI CCWWGG 4 cut(s) 76, 689, 788, 1256
TaaI ACNGT 4 cut(s) 784, 868, 908, 955
TaiI ACGT 1 cut(s) 1186
TaqI TCGA 7 cut(s) 145, 271, 286, 310, 600, 716, 814
TasI AATT 3 cut(s) 485, 596, 727
TatI WGTACW 1 cut(s) 1235
TauI GCSGC 1 cut(s) 802
TfiI GAWTC 1 cut(s) 1069
Tru1I TTAA 4 cut(s) 369, 489, 1047, 1282
Tru9I TTAA 4 cut(s) 369, 489, 1047, 1282
TscAI CASTG 4 cut(s) 105, 676, 958, 1083
TseFI GTSAC 1 cut(s) 947
TseI GCWGC 2 cut(s) 35, 887
Tsp45I GTSAC 1 cut(s) 947
TspDTI ATGAA 5 cut(s) 160, 372, 432, 800, 1229
TspGWI ACGGA 1 cut(s) 354
TspRI CASTG 4 cut(s) 105, 676, 958, 1083
VpaK11BI GGWCC 3 cut(s) 95, 235, 1247
XagI CCTNNNNNAGG 1 cut(s) 75
XapI RAATTY 2 cut(s) 485, 727
XceI RCATGY 2 cut(s) 647, 1085
XmaJI CCTAGG 3 cut(s) 76, 689, 1256
ZrmI AGTACT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.