Rorug04G0130800

negative regulation of oxidative stress-induced neuron death

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000169
Physical Location & Seq
Reverse (-)
21000719 .. 21003062
2344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0130800.1

Sequence Viewer

Length: 1749 bp
ATGGTTGCTAGGTGCCTTTACTCTGGCAAAGGTTATATGATTCCTTTGAATCAATGTATGAGCTACTCTGAGTTGTATGAAGACATTTTCCGTACATTCCAGTTTTTGCCAAGTGATGTTATTGAGCTTCAGTATTCAGTTCCTGGTTATGAAGTTTGTTTTCTTCGTAACGATCGTGATTTCCAGATGATGTTTTGCGCTGCTAGAATACATAAGTTAGATTGTGTTGAGATTTCTGTGTTAAAGATTGGTGGAAGTTGCAGCAGAACTTGTTCAGTGGATAGTTGTTCGGAAGTTATTGATGAAGACGATTATTTGGGGGAGGCATTCAGAACTGAAGTTCACAAGACGTATTTGTCTGATAAGTGGAGTTCTTATATTCATCATGTAGAGGAGAAGTTTCATGGTGTTGCCGAGCTCCGTGAGAAGCTCAGGAAGTATGCAATTGCAGTTGGTTTCGAGTTTGTATTCCTGAGAAATGATTTAGACCGTATTCATGCAGTCTGTGCAATGTTGGAACCGAAGGTTGTGATTGGCATCTTCGCGCTCTTTCATCATCTGCCAATGGTTGTCAAGACTGGCATTGCTGCTGATGTTAGCTATAATCTTTCATTGAAGCCAAGGGAGATTATGAGCAAGTTCAAATCAACATATGGGTTTGATATTTCCTACAAGGTTGTCTTGAAAGCAAAGCATAGGGCTAAGGAAGCGATTTATGGTTCCGATGCAGACTCGTTCAGCAAGTTATCTTGGTATAAGGAAGCTAGTTTGCTTGAACCTCAAGGAAGAGTCATCACATTTATTAGTGATCGAGGTACTGGATTGTTGAGTGCTTTCGATAAGGTATTTGCTGGTCATCCTCATCTGTTTTGTTACAAGCATTTGGTGGCAAACCTTGCCGGTAAATATAGGGGTAAAGGTAATTCTGTCTTGATAGAAGATGTTAAGCAGAAGTTTTTTAAGGTTGCATATTCCTCTACTGAGAAGGAATACCGTTTCAATTTGCGGTTTCTTAGAGCAGTTGGTGGTGCCAATATTATTGACCCTTTTCTTGCTAAAATCCCTGTGGAAAATTGGTGTCGTGCATTTTATACTAGCTGCCGATATGGAATTATGGCTAATGGGATTGCTGAATCATTTAACTCTTGGATTGCAAATGAGCGTTTGATGCCGGTCTATTGTATGCTGGATCAGACAAGAATAAAACAAATGGAGCAGATGGGTGAGAGGAGGGATGAGGCACAACGTTGGACCACAGAACTAACTCCCAAAATGGAGGAAAGGTTGAAGGTGCAGATGGAGAAATCTCATCGTTTCAGTGTCCATTATTCTAGCCCTGGAGTTTACGAGGTTCTATCTAACTTTTCCTATGTAGACAACATTTCTGATCATTCAAATTCATGTGTGAAATGGCAGATCAATTGTTTTTCTTGTCCTCACGGCCTTGCTGCAATACAAGCTGCCTCTGAAAATGTCTATGATTATATTGATAAGTACTTTCGTGTTGATATGTTCAAGAAGAGCTACAGTTTTCCTATCCGGCCGATAACCAATGTTGATATGTTTTCTTCTGAATCTGCAACTGACTGTATATTACCTCCCCTTGTGAAGAGGCCACCCGAGAGGCCTAGGGTGAAGCGGTTCAAGTCGGTTGGAGAGGTTGAAAAGAAGCTGATTCGTTGTGGCCGTTGCGGCAAAATGGGTACTCATCACAAGTTGAGCTACACAGAACCTCTCGTTCAGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TLD

Protein Analysis

582

Amino Acids

67.04

Weight (kDa)

8.71

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 355
AccB1I GGYRCC 2 cut(s) 12, 1028
AccI GTMKAC 1 cut(s) 1374
AccII CGCG 1 cut(s) 545
AciI CCGC 3 cut(s) 1006, 1639, 1692
AclI AACGTT 1 cut(s) 1246
AclWI GGATC 1 cut(s) 1197
AcoI YGGCCR 2 cut(s) 1541, 1684
AcsI RAATTY 1 cut(s) 1396
AcuI CTGAAG 2 cut(s) 113, 357
AfaI GTAC 4 cut(s) 94, 817, 1496, 1705
AjnI CCWGG 2 cut(s) 142, 1336
Alw21I GWGCWC 1 cut(s) 420
AlwI GGATC 1 cut(s) 1197
AlwNI CAGNNNCTG 1 cut(s) 143
Ama87I CYCGRG 1 cut(s) 1619
AoxI GGCC 5 cut(s) 1441, 1541, 1613, 1625, 1684
ApeKI GCWGC 6 cut(s) 200, 261, 587, 1098, 1448, 1460
ApoI RAATTY 1 cut(s) 1396
Asp700I GAANNNNTTC 2 cut(s) 271, 1640
AspA2I CCTAGG 1 cut(s) 1628
AspLEI GCGC 2 cut(s) 200, 547
AspS9I GGNCC 1 cut(s) 1251
AsuHPI GGTGA 2 cut(s) 1235, 1645
AvaI CYCGRG 1 cut(s) 1619
AvaII GGWCC 1 cut(s) 1251
AvrII CCTAGG 1 cut(s) 1628
BanI GGYRCC 2 cut(s) 12, 1028
BanII GRGCYC 1 cut(s) 420
BbsI GAAGAC 2 cut(s) 87, 312
Bbv12I GWGCWC 1 cut(s) 420
BbvI GCAGC 6 cut(s) 187, 273, 574, 1085, 1435, 1447
BccI CCATC 2 cut(s) 1213, 1291
BceAI ACGGC 2 cut(s) 1456, 1671
BciT130I CCWGG 2 cut(s) 144, 1338
BclI TGATCA 1 cut(s) 1387
BfaI CTAG 6 cut(s) 9, 204, 765, 1095, 1332, 1629
BfmI CTRYAG 1 cut(s) 1525
BglI GCCNNNNNGGC 1 cut(s) 1692
BisI GCNGC 7 cut(s) 201, 262, 588, 1099, 1449, 1461, 1693
BlnI CCTAGG 1 cut(s) 1628
BlsI GCNGC 7 cut(s) 202, 263, 589, 1100, 1450, 1462, 1694
BmcAI AGTACT 1 cut(s) 1496
Bme1390I CCNGG 2 cut(s) 144, 1338
Bme18I GGWCC 1 cut(s) 1251
BmeT110I CYCGRG 1 cut(s) 1619
BmgT120I GGNCC 1 cut(s) 1251
BmiI GGNNCC 4 cut(s) 14, 519, 721, 1030
BmrFI CCNGG 2 cut(s) 144, 1338
BmsI GCATC 3 cut(s) 546, 715, 1158
BpiI GAAGAC 2 cut(s) 87, 312
BpmI CTGGAG 1 cut(s) 1359
Bpu10I CCTNAGC 2 cut(s) 431, 702
BpuEI CTTGAG 1 cut(s) 765
BsaBI GATNNNNATC 1 cut(s) 536
BsaJI CCNNGG 3 cut(s) 620, 1336, 1628
BsaXI ACNNNNNCTCC 2 cut(s) 1268, 1298
Bse118I RCCGGY 2 cut(s) 899, 1171
Bse1I ACTGG 3 cut(s) 100, 583, 823
Bse3DI GCAATG 2 cut(s) 516, 582
Bse8I GATNNNNATC 1 cut(s) 536
BseBI CCWGG 2 cut(s) 144, 1338
BseDI CCNNGG 3 cut(s) 620, 1336, 1628
BseGI GGATG 2 cut(s) 856, 1240
BseJI GATNNNNATC 1 cut(s) 536
BseMI GCAATG 2 cut(s) 516, 582
BseMII CTCAG 4 cut(s) 60, 445, 464, 972
BseNI ACTGG 3 cut(s) 100, 583, 823
BseRI GAGGAG 2 cut(s) 407, 1243
BseX3I CGGCCG 1 cut(s) 1541
BseXI GCAGC 6 cut(s) 187, 273, 574, 1085, 1435, 1447
BsgI GTGCAG 1 cut(s) 1313
Bsh1236I CGCG 1 cut(s) 545
Bsh1285I CGRYCG 2 cut(s) 175, 1544
BshFI GGCC 5 cut(s) 1443, 1543, 1615, 1627, 1686
BshNI GGYRCC 2 cut(s) 12, 1028
BsiEI CGRYCG 2 cut(s) 175, 1544
BsiHKAI GWGCWC 1 cut(s) 420
BsiHKCI CYCGRG 1 cut(s) 1619
BsiSI CCGG 3 cut(s) 900, 1172, 1540
BsmI GAATGC 1 cut(s) 326
BsnI GGCC 5 cut(s) 1443, 1543, 1615, 1627, 1686
BsoBI CYCGRG 1 cut(s) 1619
Bsp1286I GDGCHC 1 cut(s) 420
Bsp143I GATC 5 cut(s) 172, 808, 1189, 1387, 1416
BspACI CCGC 3 cut(s) 1006, 1639, 1692
BspANI GGCC 5 cut(s) 1443, 1543, 1615, 1627, 1686
BspCNI CTCAG 4 cut(s) 61, 444, 465, 973
BspFNI CGCG 1 cut(s) 545
BspLI GGNNCC 4 cut(s) 14, 519, 721, 1030
BspPI GGATC 1 cut(s) 1197
BspQI GCTCTTC 1 cut(s) 1514
BspT107I GGYRCC 2 cut(s) 12, 1028
BsrDI GCAATG 2 cut(s) 516, 582
BsrFI RCCGGY 2 cut(s) 899, 1171
BsrI ACTGG 3 cut(s) 100, 583, 823
BssAI RCCGGY 2 cut(s) 899, 1171
BssECI CCNNGG 3 cut(s) 620, 1336, 1628
BssMI GATC 5 cut(s) 172, 808, 1189, 1387, 1416
BssT1I CCWWGG 2 cut(s) 620, 1628
Bst2UI CCWGG 2 cut(s) 144, 1338
Bst4CI ACNGT 4 cut(s) 491, 995, 1529, 1589
Bst6I CTCTTC 3 cut(s) 781, 1514, 1604
BstAPI GCANNNNNTGC 2 cut(s) 506, 896
BstDEI CTNAG 6 cut(s) 69, 431, 473, 702, 981, 1013
BstF5I GGATG 2 cut(s) 856, 1240
BstFNI CGCG 1 cut(s) 545
BstHHI GCGC 2 cut(s) 200, 547
BstKTI GATC 5 cut(s) 175, 811, 1192, 1390, 1419
BstMBI GATC 5 cut(s) 172, 808, 1189, 1387, 1416
BstMCI CGRYCG 2 cut(s) 175, 1544
BstMWI GCNNNNNNNGC 6 cut(s) 506, 707, 896, 1168, 1457, 1692
BstNI CCWGG 2 cut(s) 144, 1338
BstSCI CCNGG 2 cut(s) 142, 1336
BstSFI CTRYAG 1 cut(s) 1525
BstUI CGCG 1 cut(s) 545
BstV1I GCAGC 6 cut(s) 187, 273, 574, 1085, 1435, 1447
BstV2I GAAGAC 2 cut(s) 87, 312
BstZI CGGCCG 1 cut(s) 1541
BsuRI GGCC 5 cut(s) 1443, 1543, 1615, 1627, 1686
BtsCI GGATG 2 cut(s) 856, 1240
BtsIMutI CAGTG 2 cut(s) 282, 1324
CaiI CAGNNNCTG 1 cut(s) 143
CfoI GCGC 2 cut(s) 200, 547
Cfr10I RCCGGY 2 cut(s) 899, 1171
Cfr13I GGNCC 1 cut(s) 1251
Csp6I GTAC 4 cut(s) 93, 816, 1495, 1704
CviAII CATG 4 cut(s) 386, 404, 497, 1401
CviQI GTAC 4 cut(s) 93, 816, 1495, 1704
DdeI CTNAG 6 cut(s) 69, 431, 473, 702, 981, 1013
DpnI GATC 5 cut(s) 174, 810, 1191, 1389, 1418
DpnII GATC 5 cut(s) 172, 808, 1189, 1387, 1416
DrdI GACNNNNNNGTC 1 cut(s) 355
DseDI GACNNNNNNGTC 1 cut(s) 355
EaeI YGGCCR 2 cut(s) 1541, 1684
EagI CGGCCG 1 cut(s) 1541
Eam1104I CTCTTC 3 cut(s) 781, 1514, 1604
EarI CTCTTC 3 cut(s) 781, 1514, 1604
Ecl136II GAGCTC 1 cut(s) 418
EclXI CGGCCG 1 cut(s) 1541
Eco130I CCWWGG 2 cut(s) 620, 1628
Eco147I AGGCCT 1 cut(s) 1627
Eco24I GRGCYC 1 cut(s) 420
Eco47I GGWCC 1 cut(s) 1251
Eco52I CGGCCG 1 cut(s) 1541
Eco53kI GAGCTC 1 cut(s) 418
Eco57I CTGAAG 2 cut(s) 113, 357
Eco88I CYCGRG 1 cut(s) 1619
EcoICRI GAGCTC 1 cut(s) 418
EcoRII CCWGG 2 cut(s) 142, 1336
EcoT14I CCWWGG 2 cut(s) 620, 1628
EcoT38I GRGCYC 1 cut(s) 420
ErhI CCWWGG 2 cut(s) 620, 1628
FaeI CATG 4 cut(s) 389, 407, 500, 1404
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FatI CATG 4 cut(s) 385, 403, 496, 1400
FauNDI CATATG 1 cut(s) 652
FbaI TGATCA 1 cut(s) 1387
FblI GTMKAC 1 cut(s) 1374
Fnu4HI GCNGC 7 cut(s) 201, 262, 588, 1099, 1449, 1461, 1693
FokI GGATG 2 cut(s) 843, 1247
FriOI GRGCYC 1 cut(s) 420
Fsp4HI GCNGC 7 cut(s) 201, 262, 588, 1099, 1449, 1461, 1693
FspBI CTAG 6 cut(s) 9, 204, 765, 1095, 1332, 1629
GlaI GCGC 2 cut(s) 199, 546
GluI GCNGC 7 cut(s) 201, 262, 588, 1099, 1449, 1461, 1693
GsuI CTGGAG 1 cut(s) 1359
HaeIII GGCC 5 cut(s) 1443, 1543, 1615, 1627, 1686
HapII CCGG 3 cut(s) 900, 1172, 1540
HhaI GCGC 2 cut(s) 200, 547
Hin1II CATG 4 cut(s) 389, 407, 500, 1404
Hin6I GCGC 2 cut(s) 198, 545
HinP1I GCGC 2 cut(s) 198, 545
HinfI GANTC 7 cut(s) 40, 49, 731, 789, 1133, 1574, 1675
HpaII CCGG 3 cut(s) 900, 1172, 1540
HphI GGTGA 2 cut(s) 1235, 1645
Hpy166II GTNNAC 3 cut(s) 343, 1345, 1375
Hpy188I TCNGA 9 cut(s) 70, 292, 332, 361, 724, 1194, 1387, 1468, 1573
Hpy188III TCNNGA 8 cut(s) 176, 184, 433, 472, 574, 682, 931, 1516
Hpy8I GTNNAC 3 cut(s) 343, 1345, 1375
HpyAV CCTTC 3 cut(s) 517, 979, 1282
HpyCH4III ACNGT 4 cut(s) 491, 995, 1529, 1589
HpyCH4IV ACGT 2 cut(s) 350, 1246
HpyF10VI GCNNNNNNNGC 6 cut(s) 506, 707, 896, 1168, 1457, 1692
HpyF3I CTNAG 6 cut(s) 69, 431, 473, 702, 981, 1013
HpySE526I ACGT 2 cut(s) 350, 1246
Hsp92II CATG 4 cut(s) 389, 407, 500, 1404
HspAI GCGC 2 cut(s) 198, 545
Ksp22I TGATCA 1 cut(s) 1387
Kzo9I GATC 5 cut(s) 172, 808, 1189, 1387, 1416
LguI GCTCTTC 1 cut(s) 1514
LmnI GCTCC 2 cut(s) 423, 1213
Lsp1109I GCAGC 6 cut(s) 187, 273, 574, 1085, 1435, 1447
LweI GCATC 3 cut(s) 546, 715, 1158
MaeI CTAG 6 cut(s) 9, 204, 765, 1095, 1332, 1629
MaeII ACGT 2 cut(s) 350, 1246
MaeIII GTNAC 2 cut(s) 167, 872
MalI GATC 5 cut(s) 174, 810, 1191, 1389, 1418
MboI GATC 5 cut(s) 172, 808, 1189, 1387, 1416
MboII GAAGA 9 cut(s) 92, 155, 317, 532, 798, 950, 1531, 1560, 1621
MfeI CAATTG 2 cut(s) 444, 1420
MhlI GDGCHC 1 cut(s) 420
MluCI AATT 7 cut(s) 444, 922, 1000, 1072, 1110, 1396, 1420
MlyI GAGTC 2 cut(s) 725, 798
MmeI TCCRAC 3 cut(s) 495, 1229, 1633
MroXI GAANNNNTTC 2 cut(s) 271, 1640
MseI TTAA 4 cut(s) 242, 945, 960, 1140
MspI CCGG 3 cut(s) 900, 1172, 1540
MspR9I CCNGG 2 cut(s) 144, 1338
MunI CAATTG 2 cut(s) 444, 1420
Mva1269I GAATGC 1 cut(s) 326
MvaI CCWGG 2 cut(s) 144, 1338
MvnI CGCG 1 cut(s) 545
MwoI GCNNNNNNNGC 6 cut(s) 506, 707, 896, 1168, 1457, 1692
NdeI CATATG 1 cut(s) 652
NdeII GATC 5 cut(s) 172, 808, 1189, 1387, 1416
NlaIII CATG 4 cut(s) 389, 407, 500, 1404
NlaIV GGNNCC 4 cut(s) 14, 519, 721, 1030
NmeAIII GCCGAG 1 cut(s) 439
PceI AGGCCT 1 cut(s) 1627
PciSI GCTCTTC 1 cut(s) 1514
PcsI WCGNNNNNNNCGW 2 cut(s) 172, 1684
PctI GAATGC 1 cut(s) 326
PdmI GAANNNNTTC 2 cut(s) 271, 1640
PfeI GAWTC 5 cut(s) 40, 49, 1133, 1574, 1675
PkrI GCNGC 7 cut(s) 202, 263, 589, 1100, 1450, 1462, 1694
Ple19I CGATCG 1 cut(s) 175
PleI GAGTC 2 cut(s) 725, 797
PpsI GAGTC 2 cut(s) 725, 797
Psp124BI GAGCTC 1 cut(s) 420
Psp1406I AACGTT 1 cut(s) 1246
Psp6I CCWGG 2 cut(s) 142, 1336
PspGI CCWGG 2 cut(s) 142, 1336
PspN4I GGNNCC 4 cut(s) 14, 519, 721, 1030
PspPI GGNCC 1 cut(s) 1251
PstNI CAGNNNCTG 1 cut(s) 143
PvuI CGATCG 1 cut(s) 175
RsaI GTAC 4 cut(s) 94, 817, 1496, 1705
RsaNI GTAC 4 cut(s) 93, 816, 1495, 1704
SacI GAGCTC 1 cut(s) 420
SapI GCTCTTC 1 cut(s) 1514
SaqAI TTAA 4 cut(s) 242, 945, 960, 1140
SatI GCNGC 7 cut(s) 201, 262, 588, 1099, 1449, 1461, 1693
Sau3AI GATC 5 cut(s) 172, 808, 1189, 1387, 1416
Sau96I GGNCC 1 cut(s) 1251
ScaI AGTACT 1 cut(s) 1496
SchI GAGTC 2 cut(s) 725, 798
ScrFI CCNGG 2 cut(s) 144, 1338
SduI GDGCHC 1 cut(s) 420
SfaNI GCATC 3 cut(s) 546, 715, 1158
SfcI CTRYAG 1 cut(s) 1525
SinI GGWCC 1 cut(s) 1251
SmlI CTYRAG 1 cut(s) 780
SmoI CTYRAG 1 cut(s) 780
Sse9I AATT 7 cut(s) 444, 922, 1000, 1072, 1110, 1396, 1420
SseBI AGGCCT 1 cut(s) 1627
SsiI CCGC 3 cut(s) 1006, 1639, 1692
SspI AATATT 1 cut(s) 1036
SspMI CTAG 6 cut(s) 9, 204, 765, 1095, 1332, 1629
SstI GAGCTC 1 cut(s) 420
StuI AGGCCT 1 cut(s) 1627
StyD4I CCNGG 2 cut(s) 142, 1336
StyI CCWWGG 2 cut(s) 620, 1628
TaaI ACNGT 4 cut(s) 491, 995, 1529, 1589
TaiI ACGT 2 cut(s) 353, 1249
TaqI TCGA 3 cut(s) 459, 811, 837
TasI AATT 7 cut(s) 444, 922, 1000, 1072, 1110, 1396, 1420
TatI WGTACW 1 cut(s) 1494
TauI GCSGC 1 cut(s) 1695
TfiI GAWTC 5 cut(s) 40, 49, 1133, 1574, 1675
Tru1I TTAA 4 cut(s) 242, 945, 960, 1140
Tru9I TTAA 4 cut(s) 242, 945, 960, 1140
TscAI CASTG 2 cut(s) 282, 1324
TseI GCWGC 6 cut(s) 200, 261, 587, 1098, 1448, 1460
TspDTI ATGAA 9 cut(s) 93, 165, 318, 371, 392, 485, 542, 600, 1389
TspGWI ACGGA 2 cut(s) 80, 410
TspRI CASTG 2 cut(s) 282, 1324
VpaK11BI GGWCC 1 cut(s) 1251
XapI RAATTY 1 cut(s) 1396
XmaJI CCTAGG 1 cut(s) 1628
XmiI GTMKAC 1 cut(s) 1374
XmnI GAANNNNTTC 2 cut(s) 271, 1640
XspI CTAG 6 cut(s) 9, 204, 765, 1095, 1332, 1629
ZrmI AGTACT 1 cut(s) 1496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.