Rmu_sc0007671.1_g000005

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007671.1
OG0000169
Physical Location & Seq
Forward (+)
19557 .. 20656
1100 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007671.1_g000005.1.cds

Sequence Viewer

Length: 963 bp
atggtggataaggattttagggttcaagagcgtcctggggacctgttcttgttctctttcgctgctacacgggatcgaaacaagttcttcgagggggcgtatggtgttttgaccgagccccgggtttctggcatacctactatgtatgaaaaacttgagaatctcaccttgattggcaaccttttgggcggttttttggagtatgacaagaaggaatttaagaagggggtgattagggttttattcattcatgacatatctaaaccgatcctgctggaaatacaagtcttcctagatactggggttgaacccatattgcagtttcaattcgagcatctgcgagggagatgcactcaatgtgatttgctcacacatgctggcctttcttgcgaggaacccactgcagtaaacccaacacctagggctttacactttcccggagtttcgacctcagggaattcctttgccttctctgctaagcatcagggagaccttctctctccttccccgaccgtcccaaggaagaagcggcctggttttcgtcgtgtagagcgcccgacctcagagctttcttctcccaagggtaacgacagtctaggtgaggttcccgaactggctatttatactgacattgttattactccaggtacacagaagcaccaatctgttttgccgtccaaaaagcgggagcgtggtgctgcttgccatcctagtcccaagaagtttaaatcaattttgggaagtaagattccaacactgcctgctgaggcacttggtctccttgaggaggatggcgacctcactttggtctcgttgaaaaagaagtctggtaggcctcttgaaagcaagaataagactcaacgtgcaaacaagaagctggatggtactcccctgaagattacttatcctactagtactggaactgatcctagccctagggacaagggcaaaggaaagatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 zf-CCHC_4

Protein Analysis

320

Amino Acids

35.33

Weight (kDa)

9.47

Isoelectric Point (pI)

38.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 189, 529, 685
AclWI GGATC 3 cut(s) 81, 262, 920
AcsI RAATTY 2 cut(s) 215, 457
AcuI CTGAAG 1 cut(s) 914
AfaI GTAC 3 cut(s) 649, 886, 916
AfiI CCNNNNNNNGG 5 cut(s) 120, 519, 684, 787, 805
AgsI TTSAA 5 cut(s) 26, 308, 326, 817, 842
AhlI ACTAGT 1 cut(s) 911
AjnI CCWGG 3 cut(s) 34, 532, 643
AluBI AGCT 2 cut(s) 568, 877
AluI AGCT 2 cut(s) 568, 877
Alw26I GTCTC 3 cut(s) 483, 782, 814
AlwI GGATC 3 cut(s) 81, 262, 920
Ama87I CYCGRG 1 cut(s) 120
AoxI GGCC 3 cut(s) 379, 530, 833
ApeKI GCWGC 2 cut(s) 62, 698
ApoI RAATTY 2 cut(s) 215, 457
AspA2I CCTAGG 2 cut(s) 419, 935
AspLEI GCGC 1 cut(s) 555
AspS9I GGNCC 1 cut(s) 40
AsuC2I CCSGG 3 cut(s) 121, 122, 438
AsuHPI GGTGA 3 cut(s) 157, 241, 611
AvaI CYCGRG 1 cut(s) 120
AvaII GGWCC 1 cut(s) 40
AvrII CCTAGG 2 cut(s) 419, 935
AxyI CCTNAGG 1 cut(s) 451
BaeI ACNNNNGTAYC 2 cut(s) 288, 321
BanII GRGCYC 1 cut(s) 120
BbsI GAAGAC 1 cut(s) 280
BbvCI CCTCAGC 1 cut(s) 765
BbvI GCAGC 2 cut(s) 49, 685
BccI CCATC 3 cut(s) 714, 785, 875
BceAI ACGGC 1 cut(s) 658
BcgI CGANNNNNNTGC 2 cut(s) 330, 364
BciT130I CCWGG 3 cut(s) 36, 534, 645
BcnI CCSGG 3 cut(s) 121, 122, 438
BcoDI GTCTC 3 cut(s) 483, 782, 814
BcuI ACTAGT 1 cut(s) 911
BfaI CTAG 7 cut(s) 293, 420, 596, 711, 912, 930, 936
BfmI CTRYAG 1 cut(s) 402
BfoI RGCGCY 1 cut(s) 556
BisI GCNGC 3 cut(s) 63, 530, 699
BlnI CCTAGG 2 cut(s) 419, 935
BlpI GCTNAGC 1 cut(s) 477
BlsI GCNGC 3 cut(s) 64, 531, 700
BmcAI AGTACT 1 cut(s) 916
Bme1390I CCNGG 6 cut(s) 36, 121, 122, 438, 534, 645
Bme18I GGWCC 1 cut(s) 40
BmeT110I CYCGRG 1 cut(s) 120
BmgT120I GGNCC 1 cut(s) 40
BmiI GGNNCC 3 cut(s) 41, 396, 606
BmrFI CCNGG 6 cut(s) 36, 121, 122, 438, 534, 645
BmrI ACTGGG 1 cut(s) 309
BmsI GCATC 3 cut(s) 338, 343, 490
BmuI ACTGGG 1 cut(s) 309
BpiI GAAGAC 1 cut(s) 280
BplI GAGNNNNNCTC 4 cut(s) 337, 369, 480, 512
BpmI CTGGAG 1 cut(s) 627
Bpu10I CCTNAGC 1 cut(s) 765
Bpu1102I GCTNAGC 1 cut(s) 477
BpuEI CTTGAG 2 cut(s) 176, 803
BpuMI CCSGG 3 cut(s) 121, 122, 438
BsaI GGTCTC 3 cut(s) 483, 782, 814
BsaJI CCNNGG 7 cut(s) 35, 119, 120, 419, 518, 579, 935
BsaXI ACNNNNNCTCC 2 cut(s) 762, 792
Bsc4I CCNNNNNNNGG 5 cut(s) 120, 519, 684, 787, 805
Bse1I ACTGG 3 cut(s) 304, 618, 922
Bse21I CCTNAGG 1 cut(s) 451
BseBI CCWGG 3 cut(s) 36, 534, 645
BseDI CCNNGG 7 cut(s) 35, 119, 120, 419, 518, 579, 935
BseGI GGATG 3 cut(s) 706, 796, 886
BseLI CCNNNNNNNGG 5 cut(s) 120, 519, 684, 787, 805
BseMII CTCAG 3 cut(s) 465, 576, 756
BseNI ACTGG 3 cut(s) 304, 618, 922
BseRI GAGGAG 1 cut(s) 800
BseXI GCAGC 2 cut(s) 49, 685
Bsh1285I CGRYCG 1 cut(s) 513
BshFI GGCC 3 cut(s) 381, 532, 835
BsiEI CGRYCG 1 cut(s) 513
BsiHKCI CYCGRG 1 cut(s) 120
BsiSI CCGG 2 cut(s) 121, 438
BslFI GGGAC 4 cut(s) 53, 500, 699, 953
BslI CCNNNNNNNGG 5 cut(s) 120, 519, 684, 787, 805
BsmAI GTCTC 3 cut(s) 483, 782, 814
BsmFI GGGAC 4 cut(s) 53, 500, 699, 953
BsnI GGCC 3 cut(s) 381, 532, 835
Bso31I GGTCTC 3 cut(s) 483, 782, 814
BsoBI CYCGRG 1 cut(s) 120
Bsp1286I GDGCHC 1 cut(s) 120
Bsp143I GATC 3 cut(s) 73, 267, 925
Bsp1720I GCTNAGC 1 cut(s) 477
BspACI CCGC 3 cut(s) 189, 529, 685
BspANI GGCC 3 cut(s) 381, 532, 835
BspCNI CTCAG 3 cut(s) 464, 575, 757
BspHI TCATGA 1 cut(s) 250
BspLI GGNNCC 3 cut(s) 41, 396, 606
BspMAI CTGCAG 1 cut(s) 406
BspPI GGATC 3 cut(s) 81, 262, 920
BspTNI GGTCTC 3 cut(s) 483, 782, 814
BsrI ACTGG 3 cut(s) 304, 618, 922
BssECI CCNNGG 7 cut(s) 35, 119, 120, 419, 518, 579, 935
BssMI GATC 3 cut(s) 73, 267, 925
BssT1I CCWWGG 4 cut(s) 419, 518, 579, 935
Bst2UI CCWGG 3 cut(s) 36, 534, 645
Bst4CI ACNGT 2 cut(s) 514, 593
BstC8I GCNNGC 3 cut(s) 379, 703, 762
BstDEI CTNAG 4 cut(s) 451, 477, 562, 765
BstENI CCTNNNNNAGG 1 cut(s) 785
BstF5I GGATG 3 cut(s) 706, 796, 886
BstH2I RGCGCY 1 cut(s) 556
BstHHI GCGC 1 cut(s) 555
BstKTI GATC 3 cut(s) 76, 270, 928
BstMAI GTCTC 3 cut(s) 483, 782, 814
BstMBI GATC 3 cut(s) 73, 267, 925
BstMCI CGRYCG 1 cut(s) 513
BstMWI GCNNNNNNNGC 2 cut(s) 387, 473
BstNI CCWGG 3 cut(s) 36, 534, 645
BstNSI RCATGY 1 cut(s) 377
BstSCI CCNGG 6 cut(s) 34, 119, 120, 436, 532, 643
BstSFI CTRYAG 1 cut(s) 402
BstV1I GCAGC 2 cut(s) 49, 685
BstV2I GAAGAC 1 cut(s) 280
Bsu36I CCTNAGG 1 cut(s) 451
BsuRI GGCC 3 cut(s) 381, 532, 835
BtsCI GGATG 3 cut(s) 706, 796, 886
BtsI GCAGTG 2 cut(s) 399, 755
BtsIMutI CAGTG 2 cut(s) 399, 755
Cac8I GCNNGC 3 cut(s) 379, 703, 762
CciI TCATGA 1 cut(s) 250
CfoI GCGC 1 cut(s) 555
Cfr13I GGNCC 1 cut(s) 40
Cfr9I CCCGGG 1 cut(s) 120
CseI GACGC 1 cut(s) 20
Csp6I GTAC 3 cut(s) 648, 885, 915
CviAII CATG 2 cut(s) 251, 374
CviJI RGCY 9 cut(s) 118, 381, 425, 532, 568, 617, 835, 877, 933
CviKI_1 RGCY 9 cut(s) 118, 381, 425, 532, 568, 617, 835, 877, 933
CviQI GTAC 3 cut(s) 648, 885, 915
DdeI CTNAG 4 cut(s) 451, 477, 562, 765
DpnI GATC 3 cut(s) 75, 269, 927
DpnII GATC 3 cut(s) 73, 267, 925
DraI TTTAAA 1 cut(s) 727
Eco130I CCWWGG 4 cut(s) 419, 518, 579, 935
Eco147I AGGCCT 1 cut(s) 835
Eco24I GRGCYC 1 cut(s) 120
Eco31I GGTCTC 3 cut(s) 483, 782, 814
Eco47I GGWCC 1 cut(s) 40
Eco57I CTGAAG 1 cut(s) 914
Eco81I CCTNAGG 1 cut(s) 451
Eco88I CYCGRG 1 cut(s) 120
EcoNI CCTNNNNNAGG 1 cut(s) 785
EcoO109I RGGNCCY 1 cut(s) 40
EcoRI GAATTC 1 cut(s) 457
EcoRII CCWGG 3 cut(s) 34, 532, 643
EcoT14I CCWWGG 4 cut(s) 419, 518, 579, 935
EcoT38I GRGCYC 1 cut(s) 120
ErhI CCWWGG 4 cut(s) 419, 518, 579, 935
FaeI CATG 2 cut(s) 254, 377
FaqI GGGAC 4 cut(s) 53, 500, 699, 953
FatI CATG 2 cut(s) 250, 373
FauI CCCGC 1 cut(s) 678
Fnu4HI GCNGC 3 cut(s) 63, 530, 699
FokI GGATG 3 cut(s) 693, 803, 893
FriOI GRGCYC 1 cut(s) 120
Fsp4HI GCNGC 3 cut(s) 63, 530, 699
FspBI CTAG 7 cut(s) 293, 420, 596, 711, 912, 930, 936
GlaI GCGC 1 cut(s) 554
GluI GCNGC 3 cut(s) 63, 530, 699
GsuI CTGGAG 1 cut(s) 627
HaeII RGCGCY 1 cut(s) 556
HaeIII GGCC 3 cut(s) 381, 532, 835
HapII CCGG 2 cut(s) 121, 438
HgaI GACGC 1 cut(s) 20
HhaI GCGC 1 cut(s) 555
Hin1II CATG 2 cut(s) 254, 377
Hin6I GCGC 1 cut(s) 553
HinP1I GCGC 1 cut(s) 553
HinfI GANTC 3 cut(s) 160, 748, 856
HpaII CCGG 2 cut(s) 121, 438
HphI GGTGA 3 cut(s) 157, 241, 611
Hpy166II GTNNAC 2 cut(s) 409, 650
Hpy188I TCNGA 1 cut(s) 565
Hpy188III TCNNGA 4 cut(s) 26, 251, 608, 839
Hpy8I GTNNAC 2 cut(s) 409, 650
Hpy99I CGWCG 1 cut(s) 546
HpyAV CCTTC 5 cut(s) 205, 217, 478, 503, 513
HpyCH4III ACNGT 2 cut(s) 514, 593
HpyCH4IV ACGT 1 cut(s) 862
HpyCH4V TGCA 4 cut(s) 319, 351, 404, 866
HpyF10VI GCNNNNNNNGC 2 cut(s) 387, 473
HpyF3I CTNAG 4 cut(s) 451, 477, 562, 765
HpySE526I ACGT 1 cut(s) 862
Hsp92II CATG 2 cut(s) 254, 377
HspAI GCGC 1 cut(s) 553
Kzo9I GATC 3 cut(s) 73, 267, 925
LmnI GCTCC 1 cut(s) 688
Lsp1109I GCAGC 2 cut(s) 49, 685
LweI GCATC 3 cut(s) 338, 343, 490
MaeI CTAG 7 cut(s) 293, 420, 596, 711, 912, 930, 936
MaeII ACGT 1 cut(s) 862
MaeIII GTNAC 1 cut(s) 584
MalI GATC 3 cut(s) 75, 269, 927
MboI GATC 3 cut(s) 73, 267, 925
MboII GAAGA 5 cut(s) 79, 280, 535, 564, 907
MhlI GDGCHC 1 cut(s) 120
MluCI AATT 4 cut(s) 215, 326, 457, 732
MlyI GAGTC 1 cut(s) 850
MmeI TCCRAC 1 cut(s) 776
MseI TTAA 3 cut(s) 219, 726, 961
MspI CCGG 2 cut(s) 121, 438
MspR9I CCNGG 6 cut(s) 36, 121, 122, 438, 534, 645
MvaI CCWGG 3 cut(s) 36, 534, 645
MwoI GCNNNNNNNGC 2 cut(s) 387, 473
NciI CCSGG 3 cut(s) 121, 122, 438
NdeII GATC 3 cut(s) 73, 267, 925
NlaIII CATG 2 cut(s) 254, 377
NlaIV GGNNCC 3 cut(s) 41, 396, 606
NspI RCATGY 1 cut(s) 377
PagI TCATGA 1 cut(s) 250
PceI AGGCCT 1 cut(s) 835
PfeI GAWTC 2 cut(s) 160, 748
PfoI TCCNGGA 1 cut(s) 436
PkrI GCNGC 3 cut(s) 64, 531, 700
PleI GAGTC 1 cut(s) 850
PpsI GAGTC 1 cut(s) 850
PpuMI RGGWCCY 1 cut(s) 40
Psp5II RGGWCCY 1 cut(s) 40
Psp6I CCWGG 3 cut(s) 34, 532, 643
PspGI CCWGG 3 cut(s) 34, 532, 643
PspN4I GGNNCC 3 cut(s) 41, 396, 606
PspPI GGNCC 1 cut(s) 40
PspPPI RGGWCCY 1 cut(s) 40
PstI CTGCAG 1 cut(s) 406
RsaI GTAC 3 cut(s) 649, 886, 916
RsaNI GTAC 3 cut(s) 648, 885, 915
SaqAI TTAA 3 cut(s) 219, 726, 961
SatI GCNGC 3 cut(s) 63, 530, 699
Sau3AI GATC 3 cut(s) 73, 267, 925
Sau96I GGNCC 1 cut(s) 40
ScaI AGTACT 1 cut(s) 916
SchI GAGTC 1 cut(s) 850
ScrFI CCNGG 6 cut(s) 36, 121, 122, 438, 534, 645
SduI GDGCHC 1 cut(s) 120
SfaNI GCATC 3 cut(s) 338, 343, 490
SfcI CTRYAG 1 cut(s) 402
SinI GGWCC 1 cut(s) 40
SmaI CCCGGG 1 cut(s) 122
SmlI CTYRAG 2 cut(s) 155, 782
SmoI CTYRAG 2 cut(s) 155, 782
SpeI ACTAGT 1 cut(s) 911
Sse9I AATT 4 cut(s) 215, 326, 457, 732
SseBI AGGCCT 1 cut(s) 835
SsiI CCGC 3 cut(s) 189, 529, 685
SspMI CTAG 7 cut(s) 293, 420, 596, 711, 912, 930, 936
StuI AGGCCT 1 cut(s) 835
StyD4I CCNGG 6 cut(s) 34, 119, 120, 436, 532, 643
StyI CCWWGG 4 cut(s) 419, 518, 579, 935
TaaI ACNGT 2 cut(s) 514, 593
TaiI ACGT 1 cut(s) 865
TaqI TCGA 4 cut(s) 76, 90, 330, 446
TaqII GACCGA 1 cut(s) 128
TasI AATT 4 cut(s) 215, 326, 457, 732
TatI WGTACW 1 cut(s) 914
TauI GCSGC 1 cut(s) 532
TfiI GAWTC 2 cut(s) 160, 748
Tru1I TTAA 3 cut(s) 219, 726, 961
Tru9I TTAA 3 cut(s) 219, 726, 961
TscAI CASTG 2 cut(s) 406, 762
TseI GCWGC 2 cut(s) 62, 698
TspDTI ATGAA 3 cut(s) 162, 235, 239
TspMI CCCGGG 1 cut(s) 120
TspRI CASTG 2 cut(s) 406, 762
VpaK11BI GGWCC 1 cut(s) 40
XagI CCTNNNNNAGG 1 cut(s) 785
XapI RAATTY 2 cut(s) 215, 457
XceI RCATGY 1 cut(s) 377
XmaI CCCGGG 1 cut(s) 120
XmaJI CCTAGG 2 cut(s) 419, 935
XspI CTAG 7 cut(s) 293, 420, 596, 711, 912, 930, 936
ZrmI AGTACT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.