Rmu_sc0007286.1_g000005

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007286.1
OG0000169
Physical Location & Seq
Forward (+)
13375 .. 14640
1266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007286.1_g000005.1.cds

Sequence Viewer

Length: 1266 bp
atgacttcaatcaacgctattattgctagttttgctacctctctagcacttgctgatggggttaaagccccggatctgggaatgatcggaggaggtcctattcgccaatattctcagtcttttcttctcggaaaaccactcactcacaaaccagttgatcatgctgctttcaaatcccacttcctccggacgtggatggtggagaaggaatttaagatccaggaacgggcggatagccatttcctattttcctttgattctttctgtgatcggaacaaagtgctcaagggtggtgtgtggtgctttgatagggctccggtctgtctggaggaatatgacggagttctccccattgctgatgtccctatgaagcatgtcagagcttgggttagggtttctggcacccctcctctctatgaggaacctaacaacttcataatcattgggaatcttctgggaggctatttggactatgacaagaaggaatttcggataggtaccatccgtattttgttctctcatgacatctccaaacctgttcttctagagcgtcgagttttcttggcgccagatattgaacctatactgcagtttcaatttgaacatctcaagggtcgatgccctcaatgtggactgatcactcactctggagcgaagtgtgaggaacccaatgatgcagtttctacacctagggttttgaagtttggtggcagcccttctacattcggcggtgttttctctttctcagctgagaatagcatagatttacctatgccctcttctaccttgttgaagaagaagaagccagtcattcggagtttaaaacgttcaacttctaggtctgctgcaaaggaggatactgtgcacaccacggtagaactggaaggtatggatcaagagactgtcttgcaggacctagcctctgacttggtttcagtggttccatttgaacccggattggaaaacctagctgctgcccttgccatgcaaagtgagcagaagacaactttgacctataagaagagaggtcgacaggaagcaagtgttcttccgccaaagaagtttaaaaccatacttagtggcaagcttctattgcttcatgatgacgctcttggcttggttgaagctgaggatgatgctgtaattgtgacactgaacaagaaaatgggtaggccgcttgggagtaagaacaagggccctcagactcaaaagaaggtggggatgactcctttacgcctcacttatccatttgctactactgcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

421

Amino Acids

46.5

Weight (kDa)

8.93

Isoelectric Point (pI)

42.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 497
AccB1I GGYRCC 3 cut(s) 401, 497, 565
AccI GTMKAC 1 cut(s) 1030
AccIII TCCGGA 1 cut(s) 186
AciI CCGC 4 cut(s) 230, 729, 1052, 1175
AclI AACGTT 1 cut(s) 826
AclWI GGATC 3 cut(s) 81, 211, 900
AcsI RAATTY 2 cut(s) 209, 485
AcyI GRCGYC 1 cut(s) 566
AfaI GTAC 1 cut(s) 499
AfiI CCNNNNNNNGG 4 cut(s) 76, 77, 226, 629
AjiI CACGTC 1 cut(s) 192
AjnI CCWGG 1 cut(s) 219
AluBI AGCT 5 cut(s) 383, 749, 971, 1087, 1127
AluI AGCT 5 cut(s) 383, 749, 971, 1087, 1127
Alw21I GWGCWC 2 cut(s) 285, 867
Alw26I GTCTC 1 cut(s) 893
Alw44I GTGCAC 1 cut(s) 863
AlwI GGATC 3 cut(s) 81, 211, 900
Aor13HI TCCGGA 1 cut(s) 186
AoxI GGCC 2 cut(s) 1172, 1195
ApaI GGGCCC 1 cut(s) 1199
ApaLI GTGCAC 1 cut(s) 863
ApeKI GCWGC 5 cut(s) 164, 711, 845, 971, 974
ApoI RAATTY 2 cut(s) 209, 485
Asp718I GGTACC 1 cut(s) 497
AspA2I CCTAGG 1 cut(s) 689
AspLEI GCGC 1 cut(s) 568
AspS9I GGNCC 4 cut(s) 95, 913, 1195, 1196
AsuC2I CCSGG 2 cut(s) 71, 954
AvaII GGWCC 2 cut(s) 95, 913
AvrII CCTAGG 1 cut(s) 689
BaeGI GKGCMC 2 cut(s) 867, 1199
BanI GGYRCC 3 cut(s) 401, 497, 565
BanII GRGCYC 2 cut(s) 316, 1199
BbsI GAAGAC 1 cut(s) 1007
Bbv12I GWGCWC 2 cut(s) 285, 867
BbvCI CCTCAGC 1 cut(s) 1128
BbvI GCAGC 5 cut(s) 151, 723, 832, 958, 961
BccI CCATC 3 cut(s) 50, 190, 509
BciT130I CCWGG 1 cut(s) 221
BciVI GTATCC 1 cut(s) 850
BclI TGATCA 2 cut(s) 157, 636
BcnI CCSGG 2 cut(s) 71, 954
BcoDI GTCTC 1 cut(s) 893
BfaI CTAG 8 cut(s) 27, 44, 545, 690, 837, 917, 968, 1264
BfmI CTRYAG 1 cut(s) 587
BfoI RGCGCY 1 cut(s) 569
BfuI GTATCC 1 cut(s) 850
BisI GCNGC 6 cut(s) 165, 712, 846, 972, 975, 1175
BlnI CCTAGG 1 cut(s) 689
BlsI GCNGC 6 cut(s) 166, 713, 847, 973, 976, 1176
Bme1390I CCNGG 3 cut(s) 71, 221, 954
Bme18I GGWCC 2 cut(s) 95, 913
BmgBI CACGTC 1 cut(s) 192
BmgT120I GGNCC 4 cut(s) 95, 913, 1195, 1196
BmiI GGNNCC 8 cut(s) 315, 403, 423, 499, 567, 666, 942, 1197
BmrFI CCNGG 3 cut(s) 71, 221, 954
BmsI GCATC 3 cut(s) 608, 664, 1126
BpiI GAAGAC 1 cut(s) 1007
BpmI CTGGAG 2 cut(s) 347, 669
Bpu10I CCTNAGC 1 cut(s) 1128
BpuEI CTTGAG 2 cut(s) 269, 593
BpuMI CCSGG 2 cut(s) 71, 954
BsaHI GRCGYC 1 cut(s) 566
BsaJI CCNNGG 3 cut(s) 69, 689, 870
BsaWI WCCGGW 2 cut(s) 186, 316
Bsc4I CCNNNNNNNGG 4 cut(s) 76, 77, 226, 629
Bse1I ACTGG 3 cut(s) 152, 806, 885
Bse3DI GCAATG 1 cut(s) 351
BseAI TCCGGA 1 cut(s) 186
BseBI CCWGG 1 cut(s) 221
BseDI CCNNGG 3 cut(s) 69, 689, 870
BseGI GGATG 4 cut(s) 201, 501, 1138, 1227
BseLI CCNNNNNNNGG 4 cut(s) 76, 77, 226, 629
BseMI GCAATG 1 cut(s) 351
BseMII CTCAG 5 cut(s) 128, 741, 759, 1119, 1214
BseNI ACTGG 3 cut(s) 152, 806, 885
BseRI GAGGAG 2 cut(s) 105, 399
BseSI GKGCMC 2 cut(s) 867, 1199
BseXI GCAGC 5 cut(s) 151, 723, 832, 958, 961
BshFI GGCC 2 cut(s) 1174, 1197
BshNI GGYRCC 3 cut(s) 401, 497, 565
BsiHKAI GWGCWC 2 cut(s) 285, 867
BsiSI CCGG 4 cut(s) 71, 187, 317, 954
BslFI GGGAC 1 cut(s) 347
BslI CCNNNNNNNGG 4 cut(s) 76, 77, 226, 629
BsmAI GTCTC 1 cut(s) 893
BsmFI GGGAC 1 cut(s) 347
BsnI GGCC 2 cut(s) 1174, 1197
Bsp120I GGGCCC 1 cut(s) 1195
Bsp1286I GDGCHC 4 cut(s) 285, 316, 867, 1199
Bsp13I TCCGGA 1 cut(s) 186
Bsp143I GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
BspACI CCGC 4 cut(s) 230, 729, 1052, 1175
BspANI GGCC 2 cut(s) 1174, 1197
BspCNI CTCAG 5 cut(s) 127, 742, 758, 1120, 1213
BspEI TCCGGA 1 cut(s) 186
BspHI TCATGA 2 cut(s) 520, 1099
BspLI GGNNCC 8 cut(s) 315, 403, 423, 499, 567, 666, 942, 1197
BspMAI CTGCAG 1 cut(s) 591
BspPI GGATC 3 cut(s) 81, 211, 900
BspT107I GGYRCC 3 cut(s) 401, 497, 565
BsrDI GCAATG 1 cut(s) 351
BsrI ACTGG 3 cut(s) 152, 806, 885
BssECI CCNNGG 3 cut(s) 69, 689, 870
BssMI GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
BssNI GRCGYC 1 cut(s) 566
BssT1I CCWWGG 1 cut(s) 689
Bst2UI CCWGG 1 cut(s) 221
Bst4CI ACNGT 3 cut(s) 862, 874, 904
Bst6I CTCTTC 2 cut(s) 784, 1016
BstACI GRCGYC 1 cut(s) 566
BstC8I GCNNGC 1 cut(s) 1085
BstDEI CTNAG 6 cut(s) 114, 745, 750, 1076, 1128, 1200
BstDSI CCRYGG 1 cut(s) 870
BstF5I GGATG 4 cut(s) 201, 501, 1138, 1227
BstH2I RGCGCY 1 cut(s) 569
BstHHI GCGC 1 cut(s) 568
BstKTI GATC 7 cut(s) 76, 87, 160, 219, 271, 639, 895
BstMAI GTCTC 1 cut(s) 893
BstMBI GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
BstMWI GCNNNNNNNGC 6 cut(s) 23, 32, 980, 994, 1093, 1259
BstNI CCWGG 1 cut(s) 221
BstNSI RCATGY 1 cut(s) 377
BstSCI CCNGG 3 cut(s) 69, 219, 952
BstSFI CTRYAG 1 cut(s) 587
BstSLI GKGCMC 2 cut(s) 867, 1199
BstV1I GCAGC 5 cut(s) 151, 723, 832, 958, 961
BstV2I GAAGAC 1 cut(s) 1007
BstX2I RGATCY 2 cut(s) 73, 216
BstYI RGATCY 2 cut(s) 73, 216
BsuI GTATCC 1 cut(s) 850
BsuRI GGCC 2 cut(s) 1174, 1197
BtgI CCRYGG 1 cut(s) 870
BtrI CACGTC 1 cut(s) 192
BtsCI GGATG 4 cut(s) 201, 501, 1138, 1227
BtsIMutI CAGTG 2 cut(s) 942, 1151
Cac8I GCNNGC 1 cut(s) 1085
CciI TCATGA 2 cut(s) 520, 1099
CfoI GCGC 1 cut(s) 568
Cfr13I GGNCC 4 cut(s) 95, 913, 1195, 1196
CseI GACGC 2 cut(s) 539, 1115
Csp6I GTAC 1 cut(s) 498
CviAII CATG 5 cut(s) 161, 374, 521, 985, 1100
CviQI GTAC 1 cut(s) 498
DdeI CTNAG 6 cut(s) 114, 745, 750, 1076, 1128, 1200
DinI GGCGCC 1 cut(s) 567
DpnI GATC 7 cut(s) 75, 86, 159, 218, 270, 638, 894
DpnII GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
DraI TTTAAA 2 cut(s) 822, 1066
Eam1104I CTCTTC 2 cut(s) 784, 1016
EarI CTCTTC 2 cut(s) 784, 1016
EciI GGCGGA 2 cut(s) 245, 1041
Eco130I CCWWGG 1 cut(s) 689
Eco24I GRGCYC 2 cut(s) 316, 1199
Eco47I GGWCC 2 cut(s) 95, 913
EcoO109I RGGNCCY 4 cut(s) 95, 913, 1195, 1196
EcoRII CCWGG 1 cut(s) 219
EcoT14I CCWWGG 1 cut(s) 689
EcoT38I GRGCYC 2 cut(s) 316, 1199
EgeI GGCGCC 1 cut(s) 567
EheI GGCGCC 1 cut(s) 567
ErhI CCWWGG 1 cut(s) 689
FaeI CATG 5 cut(s) 164, 377, 524, 988, 1103
FaqI GGGAC 1 cut(s) 347
FatI CATG 5 cut(s) 160, 373, 520, 984, 1099
FbaI TGATCA 2 cut(s) 157, 636
FblI GTMKAC 1 cut(s) 1030
Fnu4HI GCNGC 6 cut(s) 165, 712, 846, 972, 975, 1175
FokI GGATG 4 cut(s) 208, 488, 1145, 1234
FriOI GRGCYC 2 cut(s) 316, 1199
Fsp4HI GCNGC 6 cut(s) 165, 712, 846, 972, 975, 1175
FspBI CTAG 8 cut(s) 27, 44, 545, 690, 837, 917, 968, 1264
GlaI GCGC 1 cut(s) 567
GluI GCNGC 6 cut(s) 165, 712, 846, 972, 975, 1175
GsuI CTGGAG 2 cut(s) 347, 669
HaeII RGCGCY 1 cut(s) 569
HaeIII GGCC 2 cut(s) 1174, 1197
HapII CCGG 4 cut(s) 71, 187, 317, 954
HgaI GACGC 2 cut(s) 539, 1115
HhaI GCGC 1 cut(s) 568
Hin1I GRCGYC 1 cut(s) 566
Hin1II CATG 5 cut(s) 164, 377, 524, 988, 1103
Hin6I GCGC 1 cut(s) 566
HinP1I GCGC 1 cut(s) 566
HincII GTYRAC 1 cut(s) 1031
HindII GTYRAC 1 cut(s) 1031
HindIII AAGCTT 1 cut(s) 1085
HinfI GANTC 4 cut(s) 257, 448, 1204, 1225
HpaII CCGG 4 cut(s) 71, 187, 317, 954
Hpy166II GTNNAC 3 cut(s) 632, 865, 1031
Hpy188I TCNGA 8 cut(s) 89, 131, 273, 380, 492, 816, 925, 1203
Hpy188III TCNNGA 7 cut(s) 187, 326, 521, 545, 648, 896, 1100
Hpy8I GTNNAC 3 cut(s) 632, 865, 1031
Hpy99I CGWCG 1 cut(s) 555
HpyAV CCTTC 5 cut(s) 199, 475, 726, 878, 1207
HpyCH4III ACNGT 3 cut(s) 862, 874, 904
HpyCH4IV ACGT 2 cut(s) 191, 826
HpyCH4V TGCA 6 cut(s) 589, 677, 848, 865, 910, 988
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 32, 980, 994, 1093, 1259
HpyF3I CTNAG 6 cut(s) 114, 745, 750, 1076, 1128, 1200
HpySE526I ACGT 2 cut(s) 191, 826
Hsp92I GRCGYC 1 cut(s) 566
Hsp92II CATG 5 cut(s) 164, 377, 524, 988, 1103
HspAI GCGC 1 cut(s) 566
KasI GGCGCC 1 cut(s) 565
Kpn2I TCCGGA 1 cut(s) 186
KpnI GGTACC 1 cut(s) 501
Ksp22I TGATCA 2 cut(s) 157, 636
Kzo9I GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
LmnI GCTCC 2 cut(s) 319, 650
Lsp1109I GCAGC 5 cut(s) 151, 723, 832, 958, 961
LweI GCATC 3 cut(s) 608, 664, 1126
MaeI CTAG 8 cut(s) 27, 44, 545, 690, 837, 917, 968, 1264
MaeII ACGT 2 cut(s) 191, 826
MaeIII GTNAC 1 cut(s) 1147
MalI GATC 7 cut(s) 75, 86, 159, 218, 270, 638, 894
MboI GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
MflI RGATCY 2 cut(s) 73, 216
MhlI GDGCHC 4 cut(s) 285, 316, 867, 1199
MluCI AATT 4 cut(s) 209, 485, 596, 1143
Mly113I GGCGCC 1 cut(s) 566
MlyI GAGTC 2 cut(s) 1198, 1219
MroI TCCGGA 1 cut(s) 186
MseI TTAA 4 cut(s) 63, 213, 821, 1065
MspA1I CMGCKG 1 cut(s) 749
MspI CCGG 4 cut(s) 71, 187, 317, 954
MspR9I CCNGG 3 cut(s) 71, 221, 954
MvaI CCWGG 1 cut(s) 221
MwoI GCNNNNNNNGC 6 cut(s) 23, 32, 980, 994, 1093, 1259
NarI GGCGCC 1 cut(s) 566
NciI CCSGG 2 cut(s) 71, 954
NdeII GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
NlaIII CATG 5 cut(s) 164, 377, 524, 988, 1103
NlaIV GGNNCC 8 cut(s) 315, 403, 423, 499, 567, 666, 942, 1197
NmuCI GTSAC 1 cut(s) 1147
NspI RCATGY 1 cut(s) 377
PagI TCATGA 2 cut(s) 520, 1099
PfeI GAWTC 2 cut(s) 257, 448
PfoI TCCNGGA 1 cut(s) 219
PkrI GCNGC 6 cut(s) 166, 713, 847, 973, 976, 1176
PleI GAGTC 2 cut(s) 1198, 1219
PluTI GGCGCC 1 cut(s) 569
PpsI GAGTC 2 cut(s) 1198, 1219
PpuMI RGGWCCY 2 cut(s) 95, 913
Psp1406I AACGTT 1 cut(s) 826
Psp5II RGGWCCY 2 cut(s) 95, 913
Psp6I CCWGG 1 cut(s) 219
PspGI CCWGG 1 cut(s) 219
PspN4I GGNNCC 8 cut(s) 315, 403, 423, 499, 567, 666, 942, 1197
PspOMI GGGCCC 1 cut(s) 1195
PspPI GGNCC 4 cut(s) 95, 913, 1195, 1196
PspPPI RGGWCCY 2 cut(s) 95, 913
PstI CTGCAG 1 cut(s) 591
PsuI RGATCY 2 cut(s) 73, 216
PvuII CAGCTG 1 cut(s) 749
RsaI GTAC 1 cut(s) 499
RsaNI GTAC 1 cut(s) 498
SalI GTCGAC 1 cut(s) 1029
SaqAI TTAA 4 cut(s) 63, 213, 821, 1065
SatI GCNGC 6 cut(s) 165, 712, 846, 972, 975, 1175
Sau3AI GATC 7 cut(s) 73, 84, 157, 216, 268, 636, 892
Sau96I GGNCC 4 cut(s) 95, 913, 1195, 1196
SchI GAGTC 2 cut(s) 1198, 1219
ScrFI CCNGG 3 cut(s) 71, 221, 954
SduI GDGCHC 4 cut(s) 285, 316, 867, 1199
SfaNI GCATC 3 cut(s) 608, 664, 1126
SfcI CTRYAG 1 cut(s) 587
SfoI GGCGCC 1 cut(s) 567
SinI GGWCC 2 cut(s) 95, 913
SmlI CTYRAG 2 cut(s) 284, 608
SmoI CTYRAG 2 cut(s) 284, 608
Sse9I AATT 4 cut(s) 209, 485, 596, 1143
SsiI CCGC 4 cut(s) 230, 729, 1052, 1175
SspDI GGCGCC 1 cut(s) 565
SspI AATATT 1 cut(s) 110
SspMI CTAG 8 cut(s) 27, 44, 545, 690, 837, 917, 968, 1264
StyD4I CCNGG 3 cut(s) 69, 219, 952
StyI CCWWGG 1 cut(s) 689
TaaI ACNGT 3 cut(s) 862, 874, 904
TaiI ACGT 2 cut(s) 194, 829
TaqI TCGA 3 cut(s) 553, 616, 1030
TasI AATT 4 cut(s) 209, 485, 596, 1143
TauI GCSGC 1 cut(s) 1177
TfiI GAWTC 2 cut(s) 257, 448
Tru1I TTAA 4 cut(s) 63, 213, 821, 1065
Tru9I TTAA 4 cut(s) 63, 213, 821, 1065
TscAI CASTG 2 cut(s) 942, 1158
TseFI GTSAC 1 cut(s) 1147
TseI GCWGC 5 cut(s) 164, 711, 845, 971, 974
Tsp45I GTSAC 1 cut(s) 1147
TspDTI ATGAA 3 cut(s) 383, 424, 1088
TspGWI ACGGA 2 cut(s) 354, 494
TspRI CASTG 2 cut(s) 942, 1158
VneI GTGCAC 1 cut(s) 863
VpaK11BI GGWCC 2 cut(s) 95, 913
XapI RAATTY 2 cut(s) 209, 485
XbaI TCTAGA 1 cut(s) 544
XceI RCATGY 1 cut(s) 377
XcmI CCANNNNNNNNNTGG 1 cut(s) 877
XmaJI CCTAGG 1 cut(s) 689
XmiI GTMKAC 1 cut(s) 1030
XspI CTAG 8 cut(s) 27, 44, 545, 690, 837, 917, 968, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.