Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2385 |
| AccB1I | GGYRCC | 2 cut(s) | 442, 456 |
| AccI | GTMKAC | 1 cut(s) | 1578 |
| AccII | CGCG | 1 cut(s) | 2250 |
| AciI | CCGC | 7 cut(s) | 454, 1496, 1696, 2163, 2248, 2250, 2822 |
| AclWI | GGATC | 7 cut(s) | 442, 717, 1351, 1477, 2045, 2277, 2301 |
| AcoI | YGGCCR | 1 cut(s) | 1497 |
| AcsI | RAATTY | 8 cut(s) | 297, 634, 918, 1008, 1454, 1709, 2044, 2947 |
| AcuI | CTGAAG | 7 cut(s) | 675, 710, 2322, 2546, 2690, 2862, 3114 |
| AdeI | CACNNNGTG | 2 cut(s) | 1418, 2266 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 430, 2316 |
| AflII | CTTAAG | 2 cut(s) | 913, 1031 |
| AflIII | ACRYGT | 1 cut(s) | 2398 |
| AhlI | ACTAGT | 1 cut(s) | 145 |
| AjnI | CCWGG | 4 cut(s) | 316, 349, 1603, 2610 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1758, 1790, 1941, 1973, 2120, 2152 |
| Alw21I | GWGCWC | 3 cut(s) | 469, 2436, 2970 |
| Alw26I | GTCTC | 2 cut(s) | 1292, 2624 |
| Alw44I | GTGCAC | 1 cut(s) | 465 |
| AlwI | GGATC | 7 cut(s) | 442, 717, 1351, 1477, 2045, 2277, 2301 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 350 |
| Ama87I | CYCGRG | 1 cut(s) | 771 |
| AoxI | GGCC | 6 cut(s) | 940, 1497, 1592, 1856, 2452, 2673 |
| ApaI | GGGCCC | 1 cut(s) | 1860 |
| ApaLI | GTGCAC | 1 cut(s) | 465 |
| ApeKI | GCWGC | 6 cut(s) | 52, 1397, 1733, 2280, 2564, 3327 |
| ApoI | RAATTY | 8 cut(s) | 297, 634, 918, 1008, 1454, 1709, 2044, 2947 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 338, 370 |
| AseI | ATTAAT | 1 cut(s) | 2925 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1008, 1992 |
| AspA2I | CCTAGG | 1 cut(s) | 3305 |
| AspLEI | GCGC | 1 cut(s) | 2386 |
| AspS9I | GGNCC | 8 cut(s) | 421, 940, 996, 1727, 1856, 1857, 2452, 2608 |
| AsuHPI | GGTGA | 4 cut(s) | 1655, 1664, 1672, 3352 |
| AvaI | CYCGRG | 1 cut(s) | 771 |
| AvaII | GGWCC | 4 cut(s) | 421, 996, 1727, 2608 |
| AvrII | CCTAGG | 1 cut(s) | 3305 |
| BaeGI | GKGCMC | 3 cut(s) | 469, 778, 1860 |
| BanI | GGYRCC | 2 cut(s) | 442, 456 |
| BanII | GRGCYC | 4 cut(s) | 1860, 1903, 2708, 2970 |
| BbsI | GAAGAC | 4 cut(s) | 2237, 2715, 2964, 3182 |
| Bbv12I | GWGCWC | 3 cut(s) | 469, 2436, 2970 |
| BbvI | GCAGC | 6 cut(s) | 39, 1384, 1720, 2292, 2551, 3339 |
| BceAI | ACGGC | 1 cut(s) | 927 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2543, 2577, 2972, 3006 |
| BciT130I | CCWGG | 4 cut(s) | 318, 351, 1605, 2612 |
| BciVI | GTATCC | 1 cut(s) | 1787 |
| BcoDI | GTCTC | 2 cut(s) | 1292, 2624 |
| BcuI | ACTAGT | 1 cut(s) | 145 |
| BfmI | CTRYAG | 1 cut(s) | 1193 |
| BfrI | CTTAAG | 2 cut(s) | 913, 1031 |
| BfuI | GTATCC | 1 cut(s) | 1787 |
| BglII | AGATCT | 2 cut(s) | 2186, 2714 |
| BisI | GCNGC | 9 cut(s) | 53, 1398, 1497, 1696, 1734, 2281, 2565, 2823, 3328 |
| BlnI | CCTAGG | 1 cut(s) | 3305 |
| BlsI | GCNGC | 9 cut(s) | 54, 1399, 1498, 1697, 1735, 2282, 2566, 2824, 3329 |
| Bme1390I | CCNGG | 4 cut(s) | 318, 351, 1605, 2612 |
| Bme18I | GGWCC | 4 cut(s) | 421, 996, 1727, 2608 |
| BmeT110I | CYCGRG | 1 cut(s) | 771 |
| BmgT120I | GGNCC | 8 cut(s) | 421, 940, 996, 1727, 1856, 1857, 2452, 2608 |
| BmiI | GGNNCC | 6 cut(s) | 444, 458, 997, 1858, 2453, 2796 |
| BmrFI | CCNGG | 4 cut(s) | 318, 351, 1605, 2612 |
| BmrI | ACTGGG | 1 cut(s) | 1854 |
| BmuI | ACTGGG | 1 cut(s) | 1854 |
| BpiI | GAAGAC | 4 cut(s) | 2237, 2715, 2964, 3182 |
| BpmI | CTGGAG | 2 cut(s) | 2420, 3117 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2321 |
| BpuEI | CTTGAG | 5 cut(s) | 1274, 1993, 2412, 2758, 3135 |
| Bsa29I | ATCGAT | 2 cut(s) | 737, 2662 |
| BsaBI | GATNNNNATC | 2 cut(s) | 8, 573 |
| BsaJI | CCNNGG | 6 cut(s) | 349, 1604, 2248, 2359, 2695, 3305 |
| BsaWI | WCCGGW | 1 cut(s) | 2309 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3115, 3145 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 430, 2316 |
| Bse1I | ACTGG | 6 cut(s) | 13, 446, 750, 1831, 1860, 3063 |
| Bse8I | GATNNNNATC | 2 cut(s) | 8, 573 |
| BseBI | CCWGG | 4 cut(s) | 318, 351, 1605, 2612 |
| BseCI | ATCGAT | 2 cut(s) | 737, 2662 |
| BseDI | CCNNGG | 6 cut(s) | 349, 1604, 2248, 2359, 2695, 3305 |
| BseGI | GGATG | 8 cut(s) | 9, 247, 811, 838, 1096, 2872, 3182, 3187 |
| BseJI | GATNNNNATC | 2 cut(s) | 8, 573 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 430, 2316 |
| BseMII | CTCAG | 9 cut(s) | 240, 475, 807, 851, 1088, 1515, 1940, 2867, 3170 |
| BseNI | ACTGG | 6 cut(s) | 13, 446, 750, 1831, 1860, 3063 |
| BseRI | GAGGAG | 7 cut(s) | 266, 404, 962, 1079, 1097, 1760, 2666 |
| BseSI | GKGCMC | 3 cut(s) | 469, 778, 1860 |
| BseX3I | CGGCCG | 1 cut(s) | 1497 |
| BseXI | GCAGC | 6 cut(s) | 39, 1384, 1720, 2292, 2551, 3339 |
| BseYI | CCCAGC | 1 cut(s) | 2993 |
| Bsh1236I | CGCG | 1 cut(s) | 2250 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1500 |
| BshFI | GGCC | 6 cut(s) | 942, 1499, 1594, 1858, 2454, 2675 |
| BshNI | GGYRCC | 2 cut(s) | 442, 456 |
| BshVI | ATCGAT | 2 cut(s) | 737, 2662 |
| BsiEI | CGRYCG | 1 cut(s) | 1500 |
| BsiHKAI | GWGCWC | 3 cut(s) | 469, 2436, 2970 |
| BsiHKCI | CYCGRG | 1 cut(s) | 771 |
| BsiSI | CCGG | 2 cut(s) | 159, 2310 |
| BslFI | GGGAC | 5 cut(s) | 136, 637, 712, 1009, 2057 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 430, 2316 |
| BsmAI | GTCTC | 2 cut(s) | 1292, 2624 |
| BsmBI | CGTCTC | 1 cut(s) | 2624 |
| BsmFI | GGGAC | 5 cut(s) | 136, 637, 712, 1009, 2057 |
| BsmI | GAATGC | 3 cut(s) | 2398, 2836, 3166 |
| BsnI | GGCC | 6 cut(s) | 942, 1499, 1594, 1858, 2454, 2675 |
| BsoBI | CYCGRG | 1 cut(s) | 771 |
| Bsp120I | GGGCCC | 1 cut(s) | 1856 |
| Bsp1286I | GDGCHC | 7 cut(s) | 469, 778, 1860, 1903, 2436, 2708, 2970 |
| Bsp1407I | TGTACA | 3 cut(s) | 933, 1539, 2476 |
| BspACI | CCGC | 7 cut(s) | 454, 1496, 1696, 2163, 2248, 2250, 2822 |
| BspANI | GGCC | 6 cut(s) | 942, 1499, 1594, 1858, 2454, 2675 |
| BspCNI | CTCAG | 9 cut(s) | 241, 474, 808, 852, 1089, 1516, 1939, 2866, 3169 |
| BspDI | ATCGAT | 2 cut(s) | 737, 2662 |
| BspFNI | CGCG | 1 cut(s) | 2250 |
| BspHI | TCATGA | 1 cut(s) | 1425 |
| BspLI | GGNNCC | 6 cut(s) | 444, 458, 997, 1858, 2453, 2796 |
| BspMAI | CTGCAG | 1 cut(s) | 1197 |
| BspPI | GGATC | 7 cut(s) | 442, 717, 1351, 1477, 2045, 2277, 2301 |
| BspQI | GCTCTTC | 1 cut(s) | 681 |
| BspT107I | GGYRCC | 2 cut(s) | 442, 456 |
| BspTI | CTTAAG | 2 cut(s) | 913, 1031 |
| BsrGI | TGTACA | 3 cut(s) | 933, 1539, 2476 |
| BsrI | ACTGG | 6 cut(s) | 13, 446, 750, 1831, 1860, 3063 |
| BssECI | CCNNGG | 6 cut(s) | 349, 1604, 2248, 2359, 2695, 3305 |
| BssNAI | GTATAC | 1 cut(s) | 1579 |
| BssT1I | CCWWGG | 2 cut(s) | 2359, 3305 |
| Bst1107I | GTATAC | 1 cut(s) | 1579 |
| Bst2UI | CCWGG | 4 cut(s) | 318, 351, 1605, 2612 |
| Bst6I | CTCTTC | 2 cut(s) | 681, 1104 |
| BstAFI | CTTAAG | 2 cut(s) | 913, 1031 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2156 |
| BstAUI | TGTACA | 3 cut(s) | 933, 1539, 2476 |
| BstC8I | GCNNGC | 6 cut(s) | 268, 1193, 1700, 2083, 2087, 2278 |
| BstDSI | CCRYGG | 2 cut(s) | 2248, 2695 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 428 |
| BstF5I | GGATG | 8 cut(s) | 9, 247, 811, 838, 1096, 2872, 3182, 3187 |
| BstFNI | CGCG | 1 cut(s) | 2250 |
| BstHHI | GCGC | 1 cut(s) | 2386 |
| BstMAI | GTCTC | 2 cut(s) | 1292, 2624 |
| BstMCI | CGRYCG | 1 cut(s) | 1500 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 451, 902, 1217, 1496, 1938, 2147, 2156, 3161 |
| BstNI | CCWGG | 4 cut(s) | 318, 351, 1605, 2612 |
| BstNSI | RCATGY | 2 cut(s) | 2089, 2402 |
| BstSCI | CCNGG | 4 cut(s) | 316, 349, 1603, 2610 |
| BstSFI | CTRYAG | 1 cut(s) | 1193 |
| BstSLI | GKGCMC | 3 cut(s) | 469, 778, 1860 |
| BstUI | CGCG | 1 cut(s) | 2250 |
| BstV1I | GCAGC | 6 cut(s) | 39, 1384, 1720, 2292, 2551, 3339 |
| BstV2I | GAAGAC | 4 cut(s) | 2237, 2715, 2964, 3182 |
| BstX2I | RGATCY | 7 cut(s) | 434, 709, 1343, 2037, 2186, 2269, 2714 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2060 |
| BstYI | RGATCY | 7 cut(s) | 434, 709, 1343, 2037, 2186, 2269, 2714 |
| BstZ17I | GTATAC | 1 cut(s) | 1579 |
| BstZI | CGGCCG | 1 cut(s) | 1497 |
| Bsu15I | ATCGAT | 2 cut(s) | 737, 2662 |
| BsuI | GTATCC | 1 cut(s) | 1787 |
| BsuRI | GGCC | 6 cut(s) | 942, 1499, 1594, 1858, 2454, 2675 |
| BsuTUI | ATCGAT | 2 cut(s) | 737, 2662 |
| BtgI | CCRYGG | 2 cut(s) | 2248, 2695 |
| BtgZI | GCGATG | 3 cut(s) | 2922, 2949, 2997 |
| BtsCI | GGATG | 8 cut(s) | 9, 247, 811, 838, 1096, 2872, 3182, 3187 |
| BtsI | GCAGTG | 3 cut(s) | 912, 1186, 2238 |
| Cac8I | GCNNGC | 6 cut(s) | 268, 1193, 1700, 2083, 2087, 2278 |
| CaiI | CAGNNNCTG | 1 cut(s) | 350 |
| CciI | TCATGA | 1 cut(s) | 1425 |
| CfoI | GCGC | 1 cut(s) | 2386 |
| Cfr13I | GGNCC | 8 cut(s) | 421, 940, 996, 1727, 1856, 1857, 2452, 2608 |
| Cfr42I | CCGCGG | 1 cut(s) | 2251 |
| ClaI | ATCGAT | 2 cut(s) | 737, 2662 |
| CseI | GACGC | 2 cut(s) | 2473, 2709 |
| CsiI | ACCWGGT | 1 cut(s) | 2610 |
| DraI | TTTAAA | 2 cut(s) | 303, 1708 |
| DraIII | CACNNNGTG | 2 cut(s) | 1418, 2266 |
| EaeI | YGGCCR | 1 cut(s) | 1497 |
| EagI | CGGCCG | 1 cut(s) | 1497 |
| Eam1104I | CTCTTC | 2 cut(s) | 681, 1104 |
| EarI | CTCTTC | 2 cut(s) | 681, 1104 |
| Ecl136II | GAGCTC | 1 cut(s) | 2968 |
| EclXI | CGGCCG | 1 cut(s) | 1497 |
| Eco130I | CCWWGG | 2 cut(s) | 2359, 3305 |
| Eco24I | GRGCYC | 4 cut(s) | 1860, 1903, 2708, 2970 |
| Eco47I | GGWCC | 4 cut(s) | 421, 996, 1727, 2608 |
| Eco52I | CGGCCG | 1 cut(s) | 1497 |
| Eco53kI | GAGCTC | 1 cut(s) | 2968 |
| Eco57I | CTGAAG | 7 cut(s) | 675, 710, 2322, 2546, 2690, 2862, 3114 |
| Eco88I | CYCGRG | 1 cut(s) | 771 |
| EcoICRI | GAGCTC | 1 cut(s) | 2968 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 428 |
| EcoRI | GAATTC | 2 cut(s) | 918, 2044 |
| EcoRII | CCWGG | 4 cut(s) | 316, 349, 1603, 2610 |
| EcoT14I | CCWWGG | 2 cut(s) | 2359, 3305 |
| EcoT22I | ATGCAT | 2 cut(s) | 766, 2091 |
| EcoT38I | GRGCYC | 4 cut(s) | 1860, 1903, 2708, 2970 |
| ErhI | CCWWGG | 2 cut(s) | 2359, 3305 |
| Esp3I | CGTCTC | 1 cut(s) | 2624 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1209, 1241, 1384, 1416 |
| FaqI | GGGAC | 5 cut(s) | 136, 637, 712, 1009, 2057 |
| FauNDI | CATATG | 1 cut(s) | 2827 |
| FblI | GTMKAC | 1 cut(s) | 1578 |
| Fnu4HI | GCNGC | 9 cut(s) | 53, 1398, 1497, 1696, 1734, 2281, 2565, 2823, 3328 |
| FokI | GGATG | 7 cut(s) | 254, 818, 845, 1103, 2879, 3169, 3174 |
| FriOI | GRGCYC | 4 cut(s) | 1860, 1903, 2708, 2970 |
| Fsp4HI | GCNGC | 9 cut(s) | 53, 1398, 1497, 1696, 1734, 2281, 2565, 2823, 3328 |
| FspI | TGCGCA | 1 cut(s) | 2385 |
| GlaI | GCGC | 1 cut(s) | 2385 |
| GluI | GCNGC | 9 cut(s) | 53, 1398, 1497, 1696, 1734, 2281, 2565, 2823, 3328 |
| GsaI | CCCAGC | 1 cut(s) | 2997 |
| GsuI | CTGGAG | 2 cut(s) | 2420, 3117 |
| HaeIII | GGCC | 6 cut(s) | 942, 1499, 1594, 1858, 2454, 2675 |
| HapII | CCGG | 2 cut(s) | 159, 2310 |
| HgaI | GACGC | 2 cut(s) | 2473, 2709 |
| HhaI | GCGC | 1 cut(s) | 2386 |
| Hin6I | GCGC | 1 cut(s) | 2384 |
| HinP1I | GCGC | 1 cut(s) | 2384 |
| HincII | GTYRAC | 2 cut(s) | 1891, 2098 |
| HindII | GTYRAC | 2 cut(s) | 1891, 2098 |
| HindIII | AAGCTT | 1 cut(s) | 1475 |
| HpaI | GTTAAC | 1 cut(s) | 2098 |
| HpaII | CCGG | 2 cut(s) | 159, 2310 |
| HphI | GGTGA | 4 cut(s) | 1655, 1664, 1672, 3352 |
| Hpy99I | CGWCG | 2 cut(s) | 241, 3340 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 451, 902, 1217, 1496, 1938, 2147, 2156, 3161 |
| HspAI | GCGC | 1 cut(s) | 2384 |
| KspAI | GTTAAC | 1 cut(s) | 2098 |
| KspI | CCGCGG | 1 cut(s) | 2251 |
| LguI | GCTCTTC | 1 cut(s) | 681 |
| LmnI | GCTCC | 7 cut(s) | 161, 1084, 1117, 1376, 1946, 2439, 2800 |
| Lsp1109I | GCAGC | 6 cut(s) | 39, 1384, 1720, 2292, 2551, 3339 |
| MabI | ACCWGGT | 1 cut(s) | 2610 |
| MaeIII | GTNAC | 6 cut(s) | 21, 176, 658, 1442, 1864, 3097 |
| MfeI | CAATTG | 1 cut(s) | 168 |
| MflI | RGATCY | 7 cut(s) | 434, 709, 1343, 2037, 2186, 2269, 2714 |
| MhlI | GDGCHC | 7 cut(s) | 469, 778, 1860, 1903, 2436, 2708, 2970 |
| MlyI | GAGTC | 5 cut(s) | 29, 638, 1265, 2761, 3310 |
| MmeI | TCCRAC | 4 cut(s) | 522, 1354, 2796, 3215 |
| Mph1103I | ATGCAT | 2 cut(s) | 766, 2091 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1008, 1992 |
| MslI | CAYNNNNRTG | 2 cut(s) | 875, 2214 |
| MspA1I | CMGCKG | 2 cut(s) | 2250, 2857 |
| MspCI | CTTAAG | 2 cut(s) | 913, 1031 |
| MspI | CCGG | 2 cut(s) | 159, 2310 |
| MspR9I | CCNGG | 4 cut(s) | 318, 351, 1605, 2612 |
| MunI | CAATTG | 1 cut(s) | 168 |
| Mva1269I | GAATGC | 3 cut(s) | 2398, 2836, 3166 |
| MvaI | CCWGG | 4 cut(s) | 318, 351, 1605, 2612 |
| MvnI | CGCG | 1 cut(s) | 2250 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 451, 902, 1217, 1496, 1938, 2147, 2156, 3161 |
| NdeI | CATATG | 1 cut(s) | 2827 |
| NlaIV | GGNNCC | 6 cut(s) | 444, 458, 997, 1858, 2453, 2796 |
| NmeAIII | GCCGAG | 1 cut(s) | 3324 |
| NmuCI | GTSAC | 2 cut(s) | 21, 658 |
| NsbI | TGCGCA | 1 cut(s) | 2385 |
| NsiI | ATGCAT | 2 cut(s) | 766, 2091 |
| NspI | RCATGY | 2 cut(s) | 2089, 2402 |
| PaeI | GCATGC | 1 cut(s) | 2089 |
| PagI | TCATGA | 1 cut(s) | 1425 |
| PciI | ACATGT | 1 cut(s) | 2398 |
| PciSI | GCTCTTC | 1 cut(s) | 681 |
| PctI | GAATGC | 3 cut(s) | 2398, 2836, 3166 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1008, 1992 |
| PfeI | GAWTC | 9 cut(s) | 80, 399, 734, 799, 898, 1310, 1406, 1528, 1774 |
| PkrI | GCNGC | 9 cut(s) | 54, 1399, 1498, 1697, 1735, 2282, 2566, 2824, 3329 |
| PleI | GAGTC | 5 cut(s) | 28, 638, 1264, 2760, 3309 |
| PpsI | GAGTC | 5 cut(s) | 28, 638, 1264, 2760, 3309 |
| PscI | ACATGT | 1 cut(s) | 2398 |
| PshBI | ATTAAT | 1 cut(s) | 2925 |
| Psp124BI | GAGCTC | 1 cut(s) | 2970 |
| Psp6I | CCWGG | 4 cut(s) | 316, 349, 1603, 2610 |
| PspFI | CCCAGC | 1 cut(s) | 2993 |
| PspGI | CCWGG | 4 cut(s) | 316, 349, 1603, 2610 |
| PspN4I | GGNNCC | 6 cut(s) | 444, 458, 997, 1858, 2453, 2796 |
| PspOMI | GGGCCC | 1 cut(s) | 1856 |
| PspPI | GGNCC | 8 cut(s) | 421, 940, 996, 1727, 1856, 1857, 2452, 2608 |
| PstI | CTGCAG | 1 cut(s) | 1197 |
| PstNI | CAGNNNCTG | 1 cut(s) | 350 |
| PsuI | RGATCY | 7 cut(s) | 434, 709, 1343, 2037, 2186, 2269, 2714 |
| PvuII | CAGCTG | 1 cut(s) | 2857 |
| RseI | CAYNNNNRTG | 2 cut(s) | 875, 2214 |
| SacI | GAGCTC | 1 cut(s) | 2970 |
| SacII | CCGCGG | 1 cut(s) | 2251 |
| SapI | GCTCTTC | 1 cut(s) | 681 |
| SatI | GCNGC | 9 cut(s) | 53, 1398, 1497, 1696, 1734, 2281, 2565, 2823, 3328 |
| Sau96I | GGNCC | 8 cut(s) | 421, 940, 996, 1727, 1856, 1857, 2452, 2608 |
| SchI | GAGTC | 5 cut(s) | 29, 638, 1265, 2761, 3310 |
| ScrFI | CCNGG | 4 cut(s) | 318, 351, 1605, 2612 |
| SduI | GDGCHC | 7 cut(s) | 469, 778, 1860, 1903, 2436, 2708, 2970 |
| SexAI | ACCWGGT | 1 cut(s) | 2610 |
| SfcI | CTRYAG | 1 cut(s) | 1193 |
| Sfr303I | CCGCGG | 1 cut(s) | 2251 |
| SgrBI | CCGCGG | 1 cut(s) | 2251 |
| SinI | GGWCC | 4 cut(s) | 421, 996, 1727, 2608 |
| SmiI | ATTTAAAT | 1 cut(s) | 1708 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 875, 2214 |
| SmlI | CTYRAG | 7 cut(s) | 913, 1031, 1253, 2008, 2427, 2773, 3150 |
| SmoI | CTYRAG | 7 cut(s) | 913, 1031, 1253, 2008, 2427, 2773, 3150 |
| SpeI | ACTAGT | 1 cut(s) | 145 |
| SphI | GCATGC | 1 cut(s) | 2089 |
| SsiI | CCGC | 7 cut(s) | 454, 1496, 1696, 2163, 2248, 2250, 2822 |
| SspI | AATATT | 3 cut(s) | 554, 2131, 2923 |
| SstI | GAGCTC | 1 cut(s) | 2970 |
| StyD4I | CCNGG | 4 cut(s) | 316, 349, 1603, 2610 |
| StyI | CCWWGG | 2 cut(s) | 2359, 3305 |
| SwaI | ATTTAAAT | 1 cut(s) | 1708 |
| TatI | WGTACW | 6 cut(s) | 933, 1093, 1172, 1539, 2476, 2519 |
| TauI | GCSGC | 3 cut(s) | 1499, 1698, 2825 |
| TfiI | GAWTC | 9 cut(s) | 80, 399, 734, 799, 898, 1310, 1406, 1528, 1774 |
| TseFI | GTSAC | 2 cut(s) | 21, 658 |
| TseI | GCWGC | 6 cut(s) | 52, 1397, 1733, 2280, 2564, 3327 |
| Tsp45I | GTSAC | 2 cut(s) | 21, 658 |
| TspGWI | ACGGA | 4 cut(s) | 254, 396, 609, 3125 |
| Vha464I | CTTAAG | 2 cut(s) | 913, 1031 |
| VneI | GTGCAC | 1 cut(s) | 465 |
| VpaK11BI | GGWCC | 4 cut(s) | 421, 996, 1727, 2608 |
| VspI | ATTAAT | 1 cut(s) | 2925 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 428 |
| XapI | RAATTY | 8 cut(s) | 297, 634, 918, 1008, 1454, 1709, 2044, 2947 |
| XbaI | TCTAGA | 2 cut(s) | 679, 1756 |
| XceI | RCATGY | 2 cut(s) | 2089, 2402 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3070 |
| XmaJI | CCTAGG | 1 cut(s) | 3305 |
| XmiI | GTMKAC | 1 cut(s) | 1578 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1008, 1992 |
| Zsp2I | ATGCAT | 2 cut(s) | 766, 2091 |