Rorug02G0251500

N-acetylglucosaminyl transferase component (Gpi1)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
26191579 .. 26198881
7303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0251500.1

Sequence Viewer

Length: 1089 bp
ATGAACTCGTCTTCCACCCAGTTTGTCACCTCTAGAAGGATGAGTGCCTATGAGCCAATACACCAGATGAGCATGTGGGGAGAAAGCTTTATGAGTAATGGTAATTTGAATGCCTCAGCATCCATGATCATGGATGCAGACACACAGCTAGATAATCAGTCAGAGGATGCCTCTCAAGGAATCCTGGGATCTTCGAGCAAGTATGACCAAGAAGCAACCAAACCTACGGACAAGGTCCAAAGGCGTCTTGCCCAAAATCGGGAGGCTGCTCGTAAAAGCCGGCTGAGAAAGAAGGCCTATGTTCAGCAGTTGGAAACAAGTCGTTTAAAGCTTGTTCAATTAGAGCAAGAGCTTGATAGAGCAAGACAACAGGGTCTTTATATTGGAAGTGGACTGGATGCTAATCCTCTGGGATATTCTGGCACCATGAACCCAGGTGTTGCTGCATTTGAGATGGAGTATGGAAACTGGATGGAGGAACAAAATAAGCAGATTTCTGAACTGAGGACTGTGTTGCAGGCTCAGATAAGTGACATAGAGCTTCATCTCCTTGTAGATCGCGGCATGAGTCACTATTTTAAACTTTTCAGCATGAAATCAAAAGCTGCAAAAGTTGATGTTTTCTATGTAATGTCTGGGATGTGGAAAACATCAGCTGAGCGGTTTTTCTCATGGATTGGAGGATTTCGCCCTTCAGAGCTTCTTAAGGTTCTTCTGCCTCAACTTTACCCCTTGGCAGAGCAACAACATTTGGATGTTAGCAGCCTTAGGCAATCATGTCAACAAGCAGAAGATGCTCTTTCGCAAGGTATGGATAAACTACAGTTCACTCTAGCTCAGACTGTGGCAGCTGATCCTCTGGGTGAAGGTATTTATGTCCCACATATGGCCATTGCAATGGAGAAGTTGGAAGCTCTTGTGAGCTTTGTGAACCAGGCTGATCATCTTCGAAAGGAGACGTTACAGCAGATGTCACGCATCCTCACTATCCGCCAGGCAGCTCGAGGCCTTCTTGCTTTGGGAGAGTACTTCCAACGCCTTCGAGCTTTGAGCTCGCTTTGGACAACTCGTCCTCGTGAGCTTACATAA

Protein Analysis

362

Amino Acids

40.97

Weight (kDa)

7.8

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 76 - 116 1.3e-08 bZIP transcription factor
DOG1 PF14144 164 - 239 3.2e-29 Seed dormancy control
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 372
AccB1I GGYRCC 1 cut(s) 422
AccBSI CCGCTC 1 cut(s) 661
AccII CGCG 1 cut(s) 561
AciI CCGC 3 cut(s) 561, 661, 991
AclWI GGATC 2 cut(s) 196, 848
AcoI YGGCCR 1 cut(s) 888
AcuI CTGAAG 1 cut(s) 678
AcyI GRCGYC 1 cut(s) 244
AfaI GTAC 1 cut(s) 1028
AfiI CCNNNNNNNGG 4 cut(s) 36, 258, 259, 886
AflII CTTAAG 1 cut(s) 704
AgsI TTSAA 2 cut(s) 109, 338
AhdI GACNNNNNGTC 1 cut(s) 1068
AjnI CCWGG 4 cut(s) 183, 433, 933, 993
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 1 cut(s) 1055
Alw26I GTCTC 1 cut(s) 950
AlwI GGATC 2 cut(s) 196, 848
Ama87I CYCGRG 1 cut(s) 1002
AoxI GGCC 3 cut(s) 294, 888, 1006
ApeKI GCWGC 6 cut(s) 266, 443, 605, 762, 848, 998
AspS9I GGNCC 1 cut(s) 235
AsuHPI GGTGA 2 cut(s) 19, 875
AsuII TTCGAA 1 cut(s) 949
AvaI CYCGRG 1 cut(s) 1002
AvaII GGWCC 1 cut(s) 235
AxyI CCTNAGG 1 cut(s) 767
BalI TGGCCA 1 cut(s) 890
BanI GGYRCC 1 cut(s) 422
BanII GRGCYC 1 cut(s) 1055
BauI CACGAG 1 cut(s) 1074
BbsI GAAGAC 1 cut(s) 3
Bbv12I GWGCWC 1 cut(s) 1055
BbvCI CCTCAGC 1 cut(s) 115
BbvI GCAGC 6 cut(s) 253, 430, 592, 774, 860, 1010
BccI CCATC 2 cut(s) 448, 466
BciT130I CCWGG 4 cut(s) 185, 435, 935, 995
BclI TGATCA 2 cut(s) 126, 940
BcoDI GTCTC 1 cut(s) 950
BfaI CTAG 3 cut(s) 33, 149, 833
BfmI CTRYAG 1 cut(s) 821
BfrI CTTAAG 1 cut(s) 704
BisI GCNGC 7 cut(s) 267, 444, 562, 606, 763, 849, 999
BlpI GCTNAGC 1 cut(s) 657
BlsI GCNGC 7 cut(s) 268, 445, 563, 607, 764, 850, 1000
BmcAI AGTACT 1 cut(s) 1028
Bme1390I CCNGG 4 cut(s) 185, 435, 935, 995
Bme18I GGWCC 1 cut(s) 235
BmeRI GACNNNNNGTC 1 cut(s) 1068
BmeT110I CYCGRG 1 cut(s) 1002
BmgT120I GGNCC 1 cut(s) 235
BmiI GGNNCC 1 cut(s) 424
BmrFI CCNGG 4 cut(s) 185, 435, 935, 995
BmrI ACTGGG 1 cut(s) 13
BmsI GCATC 6 cut(s) 124, 128, 157, 388, 784, 987
BmuI ACTGGG 1 cut(s) 13
BpiI GAAGAC 1 cut(s) 3
BplI GAGNNNNNCTC 2 cut(s) 155, 187
Bpu10I CCTNAGC 1 cut(s) 115
Bpu1102I GCTNAGC 1 cut(s) 657
Bpu14I TTCGAA 1 cut(s) 949
BpuEI CTTGAG 1 cut(s) 159
BsaBI GATNNNNATC 1 cut(s) 402
BsaHI GRCGYC 1 cut(s) 244
BsaJI CCNNGG 3 cut(s) 184, 433, 732
Bsc4I CCNNNNNNNGG 4 cut(s) 36, 258, 259, 886
Bse118I RCCGGY 1 cut(s) 279
Bse1I ACTGG 3 cut(s) 19, 399, 473
Bse21I CCTNAGG 1 cut(s) 767
Bse3DI GCAATG 2 cut(s) 891, 903
Bse8I GATNNNNATC 1 cut(s) 402
BseBI CCWGG 4 cut(s) 185, 435, 935, 995
BseDI CCNNGG 3 cut(s) 184, 433, 732
BseGI GGATG 9 cut(s) 45, 119, 139, 172, 403, 477, 645, 760, 978
BseJI GATNNNNATC 1 cut(s) 402
BseLI CCNNNNNNNGG 4 cut(s) 36, 258, 259, 886
BseMI GCAATG 2 cut(s) 891, 903
BseMII CTCAG 6 cut(s) 129, 275, 494, 536, 648, 851
BseNI ACTGG 3 cut(s) 19, 399, 473
BseXI GCAGC 6 cut(s) 253, 430, 592, 774, 860, 1010
Bsh1236I CGCG 1 cut(s) 561
BshFI GGCC 3 cut(s) 296, 890, 1008
BshNI GGYRCC 1 cut(s) 422
BsiHKAI GWGCWC 1 cut(s) 1055
BsiHKCI CYCGRG 1 cut(s) 1002
BsiSI CCGG 1 cut(s) 280
BslFI GGGAC 1 cut(s) 863
BslI CCNNNNNNNGG 4 cut(s) 36, 258, 259, 886
BsmAI GTCTC 1 cut(s) 950
BsmBI CGTCTC 1 cut(s) 950
BsmFI GGGAC 1 cut(s) 863
BsmI GAATGC 1 cut(s) 115
BsnI GGCC 3 cut(s) 296, 890, 1008
BsoBI CYCGRG 1 cut(s) 1002
Bsp119I TTCGAA 1 cut(s) 949
Bsp1286I GDGCHC 1 cut(s) 1055
Bsp143I GATC 5 cut(s) 126, 188, 556, 853, 940
Bsp1720I GCTNAGC 1 cut(s) 657
BspACI CCGC 3 cut(s) 561, 661, 991
BspANI GGCC 3 cut(s) 296, 890, 1008
BspCNI CTCAG 6 cut(s) 128, 276, 495, 535, 649, 850
BspFNI CGCG 1 cut(s) 561
BspLI GGNNCC 1 cut(s) 424
BspPI GGATC 2 cut(s) 196, 848
BspT104I TTCGAA 1 cut(s) 949
BspT107I GGYRCC 1 cut(s) 422
BspTI CTTAAG 1 cut(s) 704
BsrBI CCGCTC 1 cut(s) 661
BsrDI GCAATG 2 cut(s) 891, 903
BsrFI RCCGGY 1 cut(s) 279
BsrI ACTGG 3 cut(s) 19, 399, 473
BssAI RCCGGY 1 cut(s) 279
BssECI CCNNGG 3 cut(s) 184, 433, 732
BssMI GATC 5 cut(s) 126, 188, 556, 853, 940
BssNI GRCGYC 1 cut(s) 244
BssSI CACGAG 1 cut(s) 1074
BssT1I CCWWGG 1 cut(s) 732
Bst2BI CACGAG 1 cut(s) 1074
Bst2UI CCWGG 4 cut(s) 185, 435, 935, 995
Bst4CI ACNGT 3 cut(s) 511, 825, 844
BstACI GRCGYC 1 cut(s) 244
BstAFI CTTAAG 1 cut(s) 704
BstAPI GCANNNNNTGC 1 cut(s) 794
BstBI TTCGAA 1 cut(s) 949
BstC8I GCNNGC 3 cut(s) 281, 519, 1055
BstDEI CTNAG 7 cut(s) 115, 284, 503, 522, 657, 767, 837
BstENI CCTNNNNNAGG 1 cut(s) 34
BstF5I GGATG 9 cut(s) 45, 119, 139, 172, 403, 477, 645, 760, 978
BstFNI CGCG 1 cut(s) 561
BstKTI GATC 5 cut(s) 129, 191, 559, 856, 943
BstMAI GTCTC 1 cut(s) 950
BstMBI GATC 5 cut(s) 126, 188, 556, 853, 940
BstMWI GCNNNNNNNGC 1 cut(s) 794
BstNI CCWGG 4 cut(s) 185, 435, 935, 995
BstNSI RCATGY 1 cut(s) 76
BstSCI CCNGG 4 cut(s) 183, 433, 933, 993
BstSFI CTRYAG 1 cut(s) 821
BstUI CGCG 1 cut(s) 561
BstV1I GCAGC 6 cut(s) 253, 430, 592, 774, 860, 1010
BstV2I GAAGAC 1 cut(s) 3
BstX2I RGATCY 1 cut(s) 188
BstXI CCANNNNNNTGG 2 cut(s) 130, 898
BstYI RGATCY 1 cut(s) 188
Bsu36I CCTNAGG 1 cut(s) 767
BsuRI GGCC 3 cut(s) 296, 890, 1008
BtsCI GGATG 9 cut(s) 45, 119, 139, 172, 403, 477, 645, 760, 978
Cac8I GCNNGC 3 cut(s) 281, 519, 1055
Cfr10I RCCGGY 1 cut(s) 279
Cfr13I GGNCC 1 cut(s) 235
CseI GACGC 1 cut(s) 233
Csp6I GTAC 1 cut(s) 1027
CspCI CAANNNNNGTGG 2 cut(s) 4, 39
CviAII CATG 8 cut(s) 73, 124, 130, 427, 565, 592, 672, 777
CviQI GTAC 1 cut(s) 1027
DdeI CTNAG 7 cut(s) 115, 284, 503, 522, 657, 767, 837
DpnI GATC 5 cut(s) 128, 190, 558, 855, 942
DpnII GATC 5 cut(s) 126, 188, 556, 853, 940
DraI TTTAAA 2 cut(s) 327, 580
DrdI GACNNNNNNGTC 1 cut(s) 372
DriI GACNNNNNGTC 1 cut(s) 1068
DseDI GACNNNNNNGTC 1 cut(s) 372
EaeI YGGCCR 1 cut(s) 888
Eam1105I GACNNNNNGTC 1 cut(s) 1068
EciI GGCGGA 1 cut(s) 980
Ecl136II GAGCTC 1 cut(s) 1053
Eco130I CCWWGG 1 cut(s) 732
Eco147I AGGCCT 2 cut(s) 296, 1008
Eco24I GRGCYC 1 cut(s) 1055
Eco47I GGWCC 1 cut(s) 235
Eco53kI GAGCTC 1 cut(s) 1053
Eco57I CTGAAG 1 cut(s) 678
Eco81I CCTNAGG 1 cut(s) 767
Eco88I CYCGRG 1 cut(s) 1002
EcoICRI GAGCTC 1 cut(s) 1053
EcoNI CCTNNNNNAGG 1 cut(s) 34
EcoRII CCWGG 4 cut(s) 183, 433, 933, 993
EcoT14I CCWWGG 1 cut(s) 732
EcoT38I GRGCYC 1 cut(s) 1055
ErhI CCWWGG 1 cut(s) 732
Esp3I CGTCTC 1 cut(s) 950
FaeI CATG 8 cut(s) 76, 127, 133, 430, 568, 595, 675, 780
FalI AAGNNNNNCTT 2 cut(s) 783, 815
FaqI GGGAC 1 cut(s) 863
FatI CATG 8 cut(s) 72, 123, 129, 426, 564, 591, 671, 776
FauNDI CATATG 1 cut(s) 885
FbaI TGATCA 2 cut(s) 126, 940
Fnu4HI GCNGC 7 cut(s) 267, 444, 562, 606, 763, 849, 999
FokI GGATG 9 cut(s) 52, 106, 146, 179, 410, 484, 652, 767, 965
FriOI GRGCYC 1 cut(s) 1055
Fsp4HI GCNGC 7 cut(s) 267, 444, 562, 606, 763, 849, 999
FspBI CTAG 3 cut(s) 33, 149, 833
GluI GCNGC 7 cut(s) 267, 444, 562, 606, 763, 849, 999
HaeIII GGCC 3 cut(s) 296, 890, 1008
HapII CCGG 1 cut(s) 280
HgaI GACGC 1 cut(s) 233
Hin1I GRCGYC 1 cut(s) 244
Hin1II CATG 8 cut(s) 76, 127, 133, 430, 568, 595, 675, 780
HincII GTYRAC 1 cut(s) 782
HindII GTYRAC 1 cut(s) 782
HindIII AAGCTT 2 cut(s) 85, 329
HinfI GANTC 2 cut(s) 180, 568
HpaII CCGG 1 cut(s) 280
HphI GGTGA 2 cut(s) 19, 875
Hpy166II GTNNAC 4 cut(s) 392, 782, 828, 931
Hpy188I TCNGA 5 cut(s) 163, 499, 525, 697, 840
Hpy188III TCNNGA 3 cut(s) 33, 260, 1076
Hpy8I GTNNAC 4 cut(s) 392, 782, 828, 931
HpyAV CCTTC 6 cut(s) 30, 286, 702, 860, 1019, 1049
HpyCH4III ACNGT 3 cut(s) 511, 825, 844
HpyCH4IV ACGT 1 cut(s) 959
HpyCH4V TGCA 5 cut(s) 137, 446, 517, 608, 896
HpyF10VI GCNNNNNNNGC 1 cut(s) 794
HpyF3I CTNAG 7 cut(s) 115, 284, 503, 522, 657, 767, 837
HpySE526I ACGT 1 cut(s) 959
Hsp92I GRCGYC 1 cut(s) 244
Hsp92II CATG 8 cut(s) 76, 127, 133, 430, 568, 595, 675, 780
KroI GCCGGC 1 cut(s) 279
KroNI GCCGGC 1 cut(s) 281
Ksp22I TGATCA 2 cut(s) 126, 940
Kzo9I GATC 5 cut(s) 126, 188, 556, 853, 940
Lsp1109I GCAGC 6 cut(s) 253, 430, 592, 774, 860, 1010
LweI GCATC 6 cut(s) 124, 128, 157, 388, 784, 987
MaeI CTAG 3 cut(s) 33, 149, 833
MaeII ACGT 1 cut(s) 959
MaeIII GTNAC 5 cut(s) 25, 530, 569, 960, 972
MalI GATC 5 cut(s) 128, 190, 558, 855, 942
MbiI CCGCTC 1 cut(s) 661
MboI GATC 5 cut(s) 126, 188, 556, 853, 940
MboII GAAGA 5 cut(s) 3, 183, 704, 803, 938
MflI RGATCY 1 cut(s) 188
MhlI GDGCHC 1 cut(s) 1055
MlsI TGGCCA 1 cut(s) 890
MluCI AATT 2 cut(s) 103, 338
MluNI TGGCCA 1 cut(s) 890
MlyI GAGTC 1 cut(s) 577
MmeI TCCRAC 3 cut(s) 291, 888, 1057
Mox20I TGGCCA 1 cut(s) 890
MroNI GCCGGC 1 cut(s) 279
MscI TGGCCA 1 cut(s) 890
MseI TTAA 3 cut(s) 326, 579, 705
MslI CAYNNNNRTG 3 cut(s) 128, 753, 896
Msp20I TGGCCA 1 cut(s) 890
MspA1I CMGCKG 2 cut(s) 656, 851
MspCI CTTAAG 1 cut(s) 704
MspI CCGG 1 cut(s) 280
MspR9I CCNGG 4 cut(s) 185, 435, 935, 995
Mva1269I GAATGC 1 cut(s) 115
MvaI CCWGG 4 cut(s) 185, 435, 935, 995
MvnI CGCG 1 cut(s) 561
MwoI GCNNNNNNNGC 1 cut(s) 794
NaeI GCCGGC 1 cut(s) 281
NdeI CATATG 1 cut(s) 885
NdeII GATC 5 cut(s) 126, 188, 556, 853, 940
NgoMIV GCCGGC 1 cut(s) 279
NlaIII CATG 8 cut(s) 76, 127, 133, 430, 568, 595, 675, 780
NlaIV GGNNCC 1 cut(s) 424
NmuCI GTSAC 4 cut(s) 25, 530, 569, 972
NspI RCATGY 1 cut(s) 76
NspV TTCGAA 1 cut(s) 949
PaeR7I CTCGAG 1 cut(s) 1002
PceI AGGCCT 2 cut(s) 296, 1008
PctI GAATGC 1 cut(s) 115
PdiI GCCGGC 1 cut(s) 281
PfeI GAWTC 1 cut(s) 180
PflFI GACNNNGTC 1 cut(s) 233
PkrI GCNGC 7 cut(s) 268, 445, 563, 607, 764, 850, 1000
PleI GAGTC 1 cut(s) 576
PpsI GAGTC 1 cut(s) 576
Psp124BI GAGCTC 1 cut(s) 1055
Psp6I CCWGG 4 cut(s) 183, 433, 933, 993
PspGI CCWGG 4 cut(s) 183, 433, 933, 993
PspN4I GGNNCC 1 cut(s) 424
PspPI GGNCC 1 cut(s) 235
PspXI VCTCGAGB 1 cut(s) 1002
PsuI RGATCY 1 cut(s) 188
PsyI GACNNNGTC 1 cut(s) 233
PvuII CAGCTG 2 cut(s) 656, 851
RsaI GTAC 1 cut(s) 1028
RsaNI GTAC 1 cut(s) 1027
RseI CAYNNNNRTG 3 cut(s) 128, 753, 896
SacI GAGCTC 1 cut(s) 1055
SaqAI TTAA 3 cut(s) 326, 579, 705
SatI GCNGC 7 cut(s) 267, 444, 562, 606, 763, 849, 999
Sau3AI GATC 5 cut(s) 126, 188, 556, 853, 940
Sau96I GGNCC 1 cut(s) 235
ScaI AGTACT 1 cut(s) 1028
SchI GAGTC 1 cut(s) 577
ScrFI CCNGG 4 cut(s) 185, 435, 935, 995
SduI GDGCHC 1 cut(s) 1055
SfaNI GCATC 6 cut(s) 124, 128, 157, 388, 784, 987
SfcI CTRYAG 1 cut(s) 821
Sfr274I CTCGAG 1 cut(s) 1002
SfuI TTCGAA 1 cut(s) 949
SinI GGWCC 1 cut(s) 235
SlaI CTCGAG 1 cut(s) 1002
SmiMI CAYNNNNRTG 3 cut(s) 128, 753, 896
SmlI CTYRAG 3 cut(s) 174, 704, 1002
SmoI CTYRAG 3 cut(s) 174, 704, 1002
Sse9I AATT 2 cut(s) 103, 338
SseBI AGGCCT 2 cut(s) 296, 1008
SsiI CCGC 3 cut(s) 561, 661, 991
SspMI CTAG 3 cut(s) 33, 149, 833
SstI GAGCTC 1 cut(s) 1055
StuI AGGCCT 2 cut(s) 296, 1008
StyD4I CCNGG 4 cut(s) 183, 433, 933, 993
StyI CCWWGG 1 cut(s) 732
TaaI ACNGT 3 cut(s) 511, 825, 844
TaiI ACGT 1 cut(s) 962
TaqI TCGA 4 cut(s) 194, 949, 1003, 1042
TasI AATT 2 cut(s) 103, 338
TatI WGTACW 1 cut(s) 1026
TauI GCSGC 1 cut(s) 564
TfiI GAWTC 1 cut(s) 180
Tru1I TTAA 3 cut(s) 326, 579, 705
Tru9I TTAA 3 cut(s) 326, 579, 705
TseFI GTSAC 4 cut(s) 25, 530, 569, 972
TseI GCWGC 6 cut(s) 266, 443, 605, 762, 848, 998
Tsp45I GTSAC 4 cut(s) 25, 530, 569, 972
TspDTI ATGAA 4 cut(s) 17, 443, 533, 608
TspGWI ACGGA 1 cut(s) 242
Tth111I GACNNNGTC 1 cut(s) 233
Vha464I CTTAAG 1 cut(s) 704
VpaK11BI GGWCC 1 cut(s) 235
XagI CCTNNNNNAGG 1 cut(s) 34
XbaI TCTAGA 1 cut(s) 32
XceI RCATGY 1 cut(s) 76
XhoI CTCGAG 1 cut(s) 1002
XspI CTAG 3 cut(s) 33, 149, 833
ZrmI AGTACT 1 cut(s) 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.