Rmu_sc0018541.1_g000001

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018541.1
OG0000169
Physical Location & Seq
Forward (+)
1484 .. 2637
1154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018541.1_g000001.1.cds

Sequence Viewer

Length: 1080 bp
atggcatccattgacgcggtaacggcgagttttgctgcctcgcttgccctggccgaagggggacgcgcccctgacttggggaagattggaggaggtcccgtgcggaaggcctcccaatcttttctcctcggaaagcctttgactcggaaacccatcgacccaaaggcattcatgtctcactttcaccgaacctggttggtggataaggattttagggttcaagagcgtcctggggacctgttcttgttctctttcgctgctgcacgtgatcgaaacaaggttcttcgagggggcgtatggtgttttgaccgagccccggtctgttttgaagtatacgatggagtcaagcctctgcatgaacttccgtttaaacatctgcggatctggactagggtttctggcatacctcctctgtatgaagaacccgagaatctcatcttgattggcaaccttttgggcagctttttggagtatgacaagaaggaattcaagaagggggtgattagggttttattcactcatgacatatctaaaccaatcctgatggaaagacaagtcttcctagatactggggttgaaccagtactgcagtttcaattcgagcatctgcgggggagatgtactcaatgtggcttgctcacacatgctggcctttcttgtgaggaacccaccacaggagaccttctctccccttccccgaccgtcccaaggaagaagcggcctggttttcatcgagtggagcgcccaacctccttttctcccagtacacagaagcaccagcctgttttgctatccaaaaaacgggagcgtggtggtgcttgccatcctagtcccaagaagtttaaaacaatcttgggtggcaagattccaacactgcatgctgaggctcttggtctcattgaggaggatggcgacctcactttggtctcattgaaaaagacatctggtaggcctcttggaagcaagaataaggctcatcgtgcaaacaagaagctggatggtattcccctgaagattacctatccctctagtactgaaactggtcctagccctagggacaagggcaaaggaaagagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

359

Amino Acids

39.74

Weight (kDa)

9.82

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 333
AccII CGCG 2 cut(s) 17, 66
AciI CCGC 5 cut(s) 17, 103, 379, 610, 718
AclWI GGATC 1 cut(s) 389
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 1 cut(s) 485
AcuI CTGAAG 1 cut(s) 1031
AcvI CACGTG 1 cut(s) 266
AfaI GTAC 4 cut(s) 585, 622, 766, 1033
AfiI CCNNNNNNNGG 7 cut(s) 76, 77, 316, 674, 708, 801, 922
AgsI TTSAA 6 cut(s) 221, 329, 490, 578, 596, 934
AjnI CCWGG 4 cut(s) 48, 191, 229, 721
AjuI GAANNNNNNNTTGG 2 cut(s) 739, 771
AluBI AGCT 2 cut(s) 462, 994
AluI AGCT 2 cut(s) 462, 994
Alw26I GTCTC 4 cut(s) 180, 672, 899, 931
AlwI GGATC 1 cut(s) 389
Ama87I CYCGRG 1 cut(s) 425
AoxI GGCC 5 cut(s) 51, 108, 649, 719, 950
ApeKI GCWGC 4 cut(s) 35, 257, 260, 459
ApoI RAATTY 1 cut(s) 485
Asp700I GAANNNNTTC 1 cut(s) 485
AspA2I CCTAGG 1 cut(s) 1052
AspLEI GCGC 2 cut(s) 68, 744
AspS9I GGNCC 3 cut(s) 95, 235, 1043
AsuC2I CCSGG 1 cut(s) 317
AsuHPI GGTGA 2 cut(s) 176, 511
AvaI CYCGRG 1 cut(s) 425
AvaII GGWCC 3 cut(s) 95, 235, 1043
AvrII CCTAGG 1 cut(s) 1052
BaeI ACNNNNGTAYC 2 cut(s) 558, 591
BanII GRGCYC 1 cut(s) 316
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 550
BbvCI CCTCAGC 1 cut(s) 882
BbvI GCAGC 4 cut(s) 22, 244, 247, 471
BccI CCATC 6 cut(s) 161, 332, 538, 831, 902, 992
BceAI ACGGC 1 cut(s) 39
BciT130I CCWGG 4 cut(s) 50, 193, 231, 723
BcnI CCSGG 1 cut(s) 317
BcoDI GTCTC 4 cut(s) 180, 672, 899, 931
BfaI CTAG 6 cut(s) 390, 563, 828, 1029, 1047, 1053
BfmI CTRYAG 1 cut(s) 587
BfoI RGCGCY 1 cut(s) 745
BisI GCNGC 5 cut(s) 36, 258, 261, 460, 719
BlnI CCTAGG 1 cut(s) 1052
BlsI GCNGC 5 cut(s) 37, 259, 262, 461, 720
BmcAI AGTACT 2 cut(s) 585, 1033
Bme1390I CCNGG 5 cut(s) 50, 193, 231, 317, 723
Bme18I GGWCC 3 cut(s) 95, 235, 1043
BmeT110I CYCGRG 1 cut(s) 425
BmgT120I GGNCC 3 cut(s) 95, 235, 1043
BmiI GGNNCC 3 cut(s) 97, 236, 666
BmrFI CCNGG 5 cut(s) 50, 193, 231, 317, 723
BmrI ACTGGG 2 cut(s) 579, 756
BmsI GCATC 2 cut(s) 14, 613
BmuI ACTGGG 2 cut(s) 579, 756
BpiI GAAGAC 1 cut(s) 550
BplI GAGNNNNNCTC 4 cut(s) 607, 639, 669, 701
Bpu10I CCTNAGC 1 cut(s) 882
BpuMI CCSGG 1 cut(s) 317
BsaAI YACGTR 1 cut(s) 266
BsaI GGTCTC 3 cut(s) 672, 899, 931
BsaJI CCNNGG 6 cut(s) 48, 127, 230, 315, 707, 1052
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 671, 701
Bsc4I CCNNNNNNNGG 7 cut(s) 76, 77, 316, 674, 708, 801, 922
Bse1I ACTGG 4 cut(s) 574, 581, 762, 1045
BseBI CCWGG 4 cut(s) 50, 193, 231, 723
BseDI CCNNGG 6 cut(s) 48, 127, 230, 315, 707, 1052
BseGI GGATG 4 cut(s) 5, 823, 913, 1003
BseLI CCNNNNNNNGG 7 cut(s) 76, 77, 316, 674, 708, 801, 922
BseMII CTCAG 1 cut(s) 873
BseNI ACTGG 4 cut(s) 574, 581, 762, 1045
BseRI GAGGAG 4 cut(s) 105, 116, 399, 917
BseXI GCAGC 4 cut(s) 22, 244, 247, 471
BsgI GTGCAG 1 cut(s) 246
Bsh1236I CGCG 2 cut(s) 17, 66
Bsh1285I CGRYCG 1 cut(s) 702
BshFI GGCC 5 cut(s) 53, 110, 651, 721, 952
BsiEI CGRYCG 1 cut(s) 702
BsiHKCI CYCGRG 1 cut(s) 425
BsiSI CCGG 1 cut(s) 317
BslFI GGGAC 6 cut(s) 75, 81, 248, 689, 816, 1070
BslI CCNNNNNNNGG 7 cut(s) 76, 77, 316, 674, 708, 801, 922
BsmAI GTCTC 4 cut(s) 180, 672, 899, 931
BsmFI GGGAC 6 cut(s) 75, 81, 248, 689, 816, 1070
BsmI GAATGC 1 cut(s) 167
BsnI GGCC 5 cut(s) 53, 110, 651, 721, 952
Bso31I GGTCTC 3 cut(s) 672, 899, 931
BsoBI CYCGRG 1 cut(s) 425
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 2 cut(s) 268, 381
BspACI CCGC 5 cut(s) 17, 103, 379, 610, 718
BspANI GGCC 5 cut(s) 53, 110, 651, 721, 952
BspCNI CTCAG 1 cut(s) 874
BspFNI CGCG 2 cut(s) 17, 66
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 3 cut(s) 97, 236, 666
BspMAI CTGCAG 1 cut(s) 591
BspPI GGATC 1 cut(s) 389
BspTNI GGTCTC 3 cut(s) 672, 899, 931
BsrI ACTGG 4 cut(s) 574, 581, 762, 1045
BssECI CCNNGG 6 cut(s) 48, 127, 230, 315, 707, 1052
BssMI GATC 2 cut(s) 268, 381
BssNAI GTATAC 1 cut(s) 334
BssT1I CCWWGG 2 cut(s) 707, 1052
Bst1107I GTATAC 1 cut(s) 334
Bst2UI CCWGG 4 cut(s) 50, 193, 231, 723
Bst4CI ACNGT 1 cut(s) 703
BstBAI YACGTR 1 cut(s) 266
BstC8I GCNNGC 5 cut(s) 45, 635, 649, 820, 879
BstDEI CTNAG 1 cut(s) 882
BstF5I GGATG 4 cut(s) 5, 823, 913, 1003
BstFNI CGCG 2 cut(s) 17, 66
BstH2I RGCGCY 1 cut(s) 745
BstHHI GCGC 2 cut(s) 68, 744
BstKTI GATC 2 cut(s) 271, 384
BstMAI GTCTC 4 cut(s) 180, 672, 899, 931
BstMBI GATC 2 cut(s) 268, 381
BstMCI CGRYCG 1 cut(s) 702
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 787, 980
BstNI CCWGG 4 cut(s) 50, 193, 231, 723
BstNSI RCATGY 2 cut(s) 647, 881
BstSCI CCNGG 5 cut(s) 48, 191, 229, 315, 721
BstSFI CTRYAG 1 cut(s) 587
BstUI CGCG 2 cut(s) 17, 66
BstV1I GCAGC 4 cut(s) 22, 244, 247, 471
BstV2I GAAGAC 1 cut(s) 550
BstX2I RGATCY 1 cut(s) 381
BstYI RGATCY 1 cut(s) 381
BstZ17I GTATAC 1 cut(s) 334
BsuRI GGCC 5 cut(s) 53, 110, 651, 721, 952
BtsCI GGATG 4 cut(s) 5, 823, 913, 1003
BtsI GCAGTG 1 cut(s) 872
BtsIMutI CAGTG 1 cut(s) 872
Cac8I GCNNGC 5 cut(s) 45, 635, 649, 820, 879
CciI TCATGA 1 cut(s) 520
CfoI GCGC 2 cut(s) 68, 744
Cfr13I GGNCC 3 cut(s) 95, 235, 1043
CseI GACGC 3 cut(s) 23, 72, 215
CsiI ACCWGGT 1 cut(s) 191
Csp6I GTAC 4 cut(s) 584, 621, 765, 1032
CviAII CATG 5 cut(s) 172, 356, 521, 644, 878
CviQI GTAC 4 cut(s) 584, 621, 765, 1032
DdeI CTNAG 1 cut(s) 882
DpnI GATC 2 cut(s) 270, 383
DpnII GATC 2 cut(s) 268, 381
DraI TTTAAA 2 cut(s) 370, 844
EaeI YGGCCR 1 cut(s) 51
Eco130I CCWWGG 2 cut(s) 707, 1052
Eco147I AGGCCT 2 cut(s) 110, 952
Eco24I GRGCYC 1 cut(s) 316
Eco31I GGTCTC 3 cut(s) 672, 899, 931
Eco47I GGWCC 3 cut(s) 95, 235, 1043
Eco57I CTGAAG 1 cut(s) 1031
Eco72I CACGTG 1 cut(s) 266
Eco88I CYCGRG 1 cut(s) 425
EcoO109I RGGNCCY 2 cut(s) 95, 235
EcoRI GAATTC 1 cut(s) 485
EcoRII CCWGG 4 cut(s) 48, 191, 229, 721
EcoT14I CCWWGG 2 cut(s) 707, 1052
EcoT38I GRGCYC 1 cut(s) 316
ErhI CCWWGG 2 cut(s) 707, 1052
FaeI CATG 5 cut(s) 175, 359, 524, 647, 881
FaqI GGGAC 6 cut(s) 75, 81, 248, 689, 816, 1070
FatI CATG 5 cut(s) 171, 355, 520, 643, 877
FauI CCCGC 1 cut(s) 603
FblI GTMKAC 1 cut(s) 333
Fnu4HI GCNGC 5 cut(s) 36, 258, 261, 460, 719
FokI GGATG 3 cut(s) 810, 920, 1010
FriOI GRGCYC 1 cut(s) 316
Fsp4HI GCNGC 5 cut(s) 36, 258, 261, 460, 719
FspBI CTAG 6 cut(s) 390, 563, 828, 1029, 1047, 1053
GlaI GCGC 2 cut(s) 67, 743
GluI GCNGC 5 cut(s) 36, 258, 261, 460, 719
HaeII RGCGCY 1 cut(s) 745
HaeIII GGCC 5 cut(s) 53, 110, 651, 721, 952
HapII CCGG 1 cut(s) 317
HgaI GACGC 3 cut(s) 23, 72, 215
HhaI GCGC 2 cut(s) 68, 744
Hin1II CATG 5 cut(s) 175, 359, 524, 647, 881
Hin6I GCGC 2 cut(s) 66, 742
HinP1I GCGC 2 cut(s) 66, 742
HinfI GANTC 4 cut(s) 142, 342, 430, 865
HpaII CCGG 1 cut(s) 317
HphI GGTGA 2 cut(s) 176, 511
Hpy166II GTNNAC 2 cut(s) 334, 767
Hpy188I TCNGA 2 cut(s) 131, 147
Hpy188III TCNNGA 6 cut(s) 221, 385, 439, 490, 521, 541
Hpy8I GTNNAC 2 cut(s) 334, 767
HpyAV CCTTC 6 cut(s) 50, 100, 475, 487, 692, 702
HpyCH4III ACNGT 1 cut(s) 703
HpyCH4IV ACGT 1 cut(s) 265
HpyCH4V TGCA 5 cut(s) 263, 355, 589, 877, 983
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 787, 980
HpyF3I CTNAG 1 cut(s) 882
HpySE526I ACGT 1 cut(s) 265
Hsp92II CATG 5 cut(s) 175, 359, 524, 647, 881
HspAI GCGC 2 cut(s) 66, 742
Kzo9I GATC 2 cut(s) 268, 381
LmnI GCTCC 2 cut(s) 739, 805
Lsp1109I GCAGC 4 cut(s) 22, 244, 247, 471
LweI GCATC 2 cut(s) 14, 613
MabI ACCWGGT 1 cut(s) 191
MaeI CTAG 6 cut(s) 390, 563, 828, 1029, 1047, 1053
MaeII ACGT 1 cut(s) 265
MaeIII GTNAC 1 cut(s) 19
MalI GATC 2 cut(s) 270, 383
MboI GATC 2 cut(s) 268, 381
MboII GAAGA 6 cut(s) 94, 275, 431, 550, 724, 1024
MflI RGATCY 1 cut(s) 381
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 2 cut(s) 485, 596
MlyI GAGTC 2 cut(s) 136, 351
MmeI TCCRAC 1 cut(s) 893
MroXI GAANNNNTTC 1 cut(s) 485
MseI TTAA 3 cut(s) 369, 843, 1078
MspI CCGG 1 cut(s) 317
MspR9I CCNGG 5 cut(s) 50, 193, 231, 317, 723
MssI GTTTAAAC 1 cut(s) 370
Mva1269I GAATGC 1 cut(s) 167
MvaI CCWGG 4 cut(s) 50, 193, 231, 723
MvnI CGCG 2 cut(s) 17, 66
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 44, 787, 980
NciI CCSGG 1 cut(s) 317
NdeII GATC 2 cut(s) 268, 381
NlaIII CATG 5 cut(s) 175, 359, 524, 647, 881
NlaIV GGNNCC 3 cut(s) 97, 236, 666
NspI RCATGY 2 cut(s) 647, 881
PaeI GCATGC 1 cut(s) 881
PagI TCATGA 1 cut(s) 520
PceI AGGCCT 2 cut(s) 110, 952
PctI GAATGC 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 485
PfeI GAWTC 2 cut(s) 430, 865
PkrI GCNGC 5 cut(s) 37, 259, 262, 461, 720
PleI GAGTC 2 cut(s) 136, 350
PmaCI CACGTG 1 cut(s) 266
PmeI GTTTAAAC 1 cut(s) 370
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 2 cut(s) 136, 350
Ppu21I YACGTR 1 cut(s) 266
PpuMI RGGWCCY 2 cut(s) 95, 235
Psp5II RGGWCCY 2 cut(s) 95, 235
Psp6I CCWGG 4 cut(s) 48, 191, 229, 721
PspCI CACGTG 1 cut(s) 266
PspGI CCWGG 4 cut(s) 48, 191, 229, 721
PspN4I GGNNCC 3 cut(s) 97, 236, 666
PspPI GGNCC 3 cut(s) 95, 235, 1043
PspPPI RGGWCCY 2 cut(s) 95, 235
PstI CTGCAG 1 cut(s) 591
PsuI RGATCY 1 cut(s) 381
RsaI GTAC 4 cut(s) 585, 622, 766, 1033
RsaNI GTAC 4 cut(s) 584, 621, 765, 1032
SaqAI TTAA 3 cut(s) 369, 843, 1078
SatI GCNGC 5 cut(s) 36, 258, 261, 460, 719
Sau3AI GATC 2 cut(s) 268, 381
Sau96I GGNCC 3 cut(s) 95, 235, 1043
ScaI AGTACT 2 cut(s) 585, 1033
SchI GAGTC 2 cut(s) 136, 351
ScrFI CCNGG 5 cut(s) 50, 193, 231, 317, 723
SduI GDGCHC 1 cut(s) 316
SexAI ACCWGGT 1 cut(s) 191
SfaNI GCATC 2 cut(s) 14, 613
SfcI CTRYAG 1 cut(s) 587
SinI GGWCC 3 cut(s) 95, 235, 1043
SphI GCATGC 1 cut(s) 881
Sse9I AATT 2 cut(s) 485, 596
SseBI AGGCCT 2 cut(s) 110, 952
SsiI CCGC 5 cut(s) 17, 103, 379, 610, 718
SspMI CTAG 6 cut(s) 390, 563, 828, 1029, 1047, 1053
StuI AGGCCT 2 cut(s) 110, 952
StyD4I CCNGG 5 cut(s) 48, 191, 229, 315, 721
StyI CCWWGG 2 cut(s) 707, 1052
TaaI ACNGT 1 cut(s) 703
TaiI ACGT 1 cut(s) 268
TaqI TCGA 5 cut(s) 156, 271, 286, 600, 733
TaqII GACCGA 1 cut(s) 324
TasI AATT 2 cut(s) 485, 596
TatI WGTACW 4 cut(s) 583, 620, 764, 1031
TauI GCSGC 1 cut(s) 721
TfiI GAWTC 2 cut(s) 430, 865
Tru1I TTAA 3 cut(s) 369, 843, 1078
Tru9I TTAA 3 cut(s) 369, 843, 1078
TscAI CASTG 1 cut(s) 879
TseI GCWGC 4 cut(s) 35, 257, 260, 459
TspDTI ATGAA 4 cut(s) 160, 372, 432, 719
TspGWI ACGGA 1 cut(s) 354
TspRI CASTG 1 cut(s) 879
VpaK11BI GGWCC 3 cut(s) 95, 235, 1043
XapI RAATTY 1 cut(s) 485
XceI RCATGY 2 cut(s) 647, 881
XmaJI CCTAGG 1 cut(s) 1052
XmiI GTMKAC 1 cut(s) 333
XmnI GAANNNNTTC 1 cut(s) 485
XspI CTAG 6 cut(s) 390, 563, 828, 1029, 1047, 1053
ZrmI AGTACT 2 cut(s) 585, 1033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.