Rorug05G0205300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000169
Physical Location & Seq
Forward (+)
20500320 .. 20503000
2681 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0205300.1

Sequence Viewer

Length: 1572 bp
ATGGAAGTGACAGTGGCTAGTTGGGTAGCACTGAGCCTTGTTTTTGTTAGCATAATAGTAAGATGGGCATGGAATATATTGGATTGGGTGTGGCTGAAGCCGAAGAAGCTGGAAAGATGTTTGAGGGAGCAAGGCCTCAAAGGCAATTCCTACAAACTTCTTAATGGAGACATGAAGGAGAACTCTATCATGCTCAACCAAGCAAAATCCAAACCCATGAATCTCTCCACCTCCCATGACATAGCACCGCAAGTCGACCCTTTCGTCGATCAAACAGTGAAAACTTACGGAAAGAACTCTTTTGTTTGGATCGGCCCCATACCAAGAGTGAACGTAATGAATCCAGAAGATTTGAGAGATGTCTTCACAAGAAAAGATGATTTCTGTAAGCCAGTATCAAACCCACTTCTTCTGTTGCTAGCAAAAGGTCTTGTATTCTATGAAGGTGATAAATGGGCAAAACACAGAAGGATTATCAACCCAGCATTTCATTTCGAGAAGCTAAAGCTTATGATACCGGCGTTCCACCAAAGTTTTGATGAGATGATCAAGGACTGGGAGAGCTCAGTGTCAAAAGAGGGTTCATCTGCTGAGTTGGATGTCTGGCCTTCTCTTGAAAATATGACGGCAGATGTGATCTCTAGAACAGCATTTGGAAGTAGTTCTAAAGAAGGAAGAAAAATATTTGAACTCTTGAAGGAGCAAGCAGTACATGTAACAAAAGCCATACATAGCATTTACATTCCAGGATGGAGGTTTCTACCAACTAAGATGAACAGGAGGATGAACGAGATTAACAAAGAAATAAAAGGTATACTAAAGGGTATTATTGAGAACAGAGAGCAGGCCATGAAAGCAGGTGACGCCACTAAAGATGACCTATTAGGGGCACTTCTGGAGTCAAGCTTGAAGGACATTCAGGATCATAGGAAGAACAATAAAAATTTTGGGATGAGTATTGACGATGTAATTGAGGAGTGTAAGCTGTTTTACTTTGCTGGGCAAGAGACCACTTCAGTGTTGCTGGTTTGGACAATGGTTTTGCTTAGTCAAAATCAGGAGTGGCAAGATCGAGCAAGAGAAGAGGTTTTGCAAGTCTTTGGGAGCAACAAGCCAGACTTTGACGGCCTAACTCACCTAAAAGTTGTAACCATGATTTTACATGAAGTTCTTCGACTATACCCAGCAGTTGTTGAATTTAATCGAACCATTCCCATGAAAACTCAACTTGGGAAGTACTCACTACCCGCAGGAGTCGAAGTCCACTTACCAACACTGCTCATTCACCACGACAAGGAACTGTGGGGTGATGACGCAGACGAGTTCAAGCCAGATAGGTTTTCGGAAGGAGTTTCCAAGGCAACTAAGAGCCAACTCTCATTCTTCCCTTTCGGAGCCGGTCCTAGAATTTGCATTGGACAGAACTTTGCTATGACGGAAGCAAAATTGGCCTTAGCATTGATTTTGCAACACTTTACGTTTGAGCTTTCTCCATCTTATGCTCACGCTCCTTCGTATCTTATAACCCTTCAACCACAGTATGGTGCTCCTATTATTTTACATCGACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

523

Amino Acids

59.73

Weight (kDa)

8.13

Isoelectric Point (pI)

34.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 88 - 499 8.3e-89 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1523
AarI CACCTGC 1 cut(s) 848
AasI GACNNNNNNGTC 1 cut(s) 263
Acc36I ACCTGC 1 cut(s) 848
AccB7I CCANNNNNTGG 1 cut(s) 1541
AccI GTMKAC 2 cut(s) 255, 814
AciI CCGC 2 cut(s) 248, 1248
AclWI GGATC 2 cut(s) 317, 930
AcsI RAATTY 3 cut(s) 943, 1196, 1407
AcuI CTGAAG 2 cut(s) 116, 999
AcyI GRCGYC 1 cut(s) 864
AfaI GTAC 2 cut(s) 711, 1238
AfiI CCNNNNNNNGG 3 cut(s) 886, 1294, 1541
AflIII ACRYGT 1 cut(s) 712
AgsI TTSAA 7 cut(s) 617, 689, 697, 910, 1196, 1327, 1532
AjnI CCWGG 1 cut(s) 745
AleI CACNNNNGTG 1 cut(s) 1016
AluBI AGCT 7 cut(s) 109, 502, 508, 564, 906, 985, 1486
AluI AGCT 7 cut(s) 109, 502, 508, 564, 906, 985, 1486
Alw21I GWGCWC 2 cut(s) 566, 1549
Alw26I GTCTC 2 cut(s) 162, 1001
AlwI GGATC 2 cut(s) 317, 930
AoxI GGCC 6 cut(s) 133, 313, 605, 846, 1126, 1449
ApoI RAATTY 3 cut(s) 943, 1196, 1407
ArsI GACNNNNNNTTYG 2 cut(s) 1024, 1056
Asp700I GAANNNNTTC 2 cut(s) 661, 1170
AspS9I GGNCC 2 cut(s) 314, 1400
AsuHPI GGTGA 5 cut(s) 458, 872, 1127, 1277, 1319
AsuNHI GCTAGC 1 cut(s) 418
AvaII GGWCC 1 cut(s) 1400
BaeGI GKGCMC 1 cut(s) 892
BaeI ACNNNNGTAYC 2 cut(s) 506, 539
BanII GRGCYC 1 cut(s) 566
BarI GAAGNNNNNNTAC 2 cut(s) 1251, 1283
BbsI GAAGAC 1 cut(s) 355
Bbv12I GWGCWC 2 cut(s) 566, 1549
BccI CCATC 3 cut(s) 57, 744, 1501
BceAI ACGGC 2 cut(s) 642, 1141
BciT130I CCWGG 1 cut(s) 747
BclI TGATCA 1 cut(s) 546
BcoDI GTCTC 2 cut(s) 162, 1001
BfaI CTAG 4 cut(s) 18, 419, 642, 1404
BfuAI ACCTGC 1 cut(s) 848
BglI GCCNNNNNGGC 1 cut(s) 141
BmcAI AGTACT 1 cut(s) 1238
Bme1390I CCNGG 1 cut(s) 747
Bme18I GGWCC 1 cut(s) 1400
BmgT120I GGNCC 2 cut(s) 314, 1400
BmiI GGNNCC 2 cut(s) 316, 1396
BmrFI CCNGG 1 cut(s) 747
BmrI ACTGGG 1 cut(s) 565
BmtI GCTAGC 1 cut(s) 422
BmuI ACTGGG 1 cut(s) 565
BpiI GAAGAC 1 cut(s) 355
BpmI CTGGAG 1 cut(s) 917
Bpu10I CCTNAGC 1 cut(s) 1453
BsaHI GRCGYC 1 cut(s) 864
BsaI GGTCTC 1 cut(s) 1001
BsaJI CCNNGG 1 cut(s) 1356
BsaXI ACNNNNNCTCC 2 cut(s) 1245, 1275
Bsc4I CCNNNNNNNGG 3 cut(s) 886, 1294, 1541
Bse118I RCCGGY 2 cut(s) 517, 1397
Bse1I ACTGG 2 cut(s) 392, 560
BseBI CCWGG 1 cut(s) 747
BseDI CCNNGG 1 cut(s) 1356
BseGI GGATG 4 cut(s) 604, 755, 789, 957
BseLI CCNNNNNNNGG 3 cut(s) 886, 1294, 1541
BseMII CTCAG 3 cut(s) 23, 579, 582
BseNI ACTGG 2 cut(s) 392, 560
BseRI GAGGAG 1 cut(s) 989
BseSI GKGCMC 1 cut(s) 892
BseYI CCCAGC 3 cut(s) 481, 998, 1183
BshFI GGCC 6 cut(s) 135, 315, 607, 848, 1128, 1451
BsiHKAI GWGCWC 2 cut(s) 566, 1549
BsiSI CCGG 2 cut(s) 518, 1398
BslI CCNNNNNNNGG 3 cut(s) 886, 1294, 1541
BsmAI GTCTC 2 cut(s) 162, 1001
BsnI GGCC 6 cut(s) 135, 315, 607, 848, 1128, 1451
Bso31I GGTCTC 1 cut(s) 1001
Bsp1286I GDGCHC 3 cut(s) 566, 892, 1549
Bsp143I GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
BspACI CCGC 2 cut(s) 248, 1248
BspANI GGCC 6 cut(s) 135, 315, 607, 848, 1128, 1451
BspCNI CTCAG 3 cut(s) 24, 578, 583
BspLI GGNNCC 2 cut(s) 316, 1396
BspMI ACCTGC 1 cut(s) 848
BspOI GCTAGC 1 cut(s) 422
BspPI GGATC 2 cut(s) 317, 930
BspTNI GGTCTC 1 cut(s) 1001
BsrFI RCCGGY 2 cut(s) 517, 1397
BsrI ACTGG 2 cut(s) 392, 560
BssAI RCCGGY 2 cut(s) 517, 1397
BssECI CCNNGG 1 cut(s) 1356
BssMI GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
BssNAI GTATAC 1 cut(s) 815
BssNI GRCGYC 1 cut(s) 864
BssT1I CCWWGG 1 cut(s) 1356
Bst1107I GTATAC 1 cut(s) 815
Bst2UI CCWGG 1 cut(s) 747
Bst4CI ACNGT 4 cut(s) 13, 277, 1302, 1539
Bst6I CTCTTC 1 cut(s) 1077
BstACI GRCGYC 1 cut(s) 864
BstC8I GCNNGC 3 cut(s) 420, 705, 846
BstDEI CTNAG 7 cut(s) 32, 565, 591, 768, 1046, 1365, 1453
BstF5I GGATG 4 cut(s) 604, 755, 789, 957
BstKTI GATC 6 cut(s) 271, 312, 549, 639, 925, 1072
BstMAI GTCTC 2 cut(s) 162, 1001
BstMBI GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
BstMWI GCNNNNNNNGC 5 cut(s) 106, 141, 854, 863, 1448
BstNI CCWGG 1 cut(s) 747
BstNSI RCATGY 1 cut(s) 716
BstSCI CCNGG 1 cut(s) 745
BstSLI GKGCMC 1 cut(s) 892
BstV2I GAAGAC 1 cut(s) 355
BstZ17I GTATAC 1 cut(s) 815
BsuRI GGCC 6 cut(s) 135, 315, 607, 848, 1128, 1451
BtsCI GGATG 4 cut(s) 604, 755, 789, 957
BtsI GCAGTG 1 cut(s) 1274
BtsIMutI CAGTG 6 cut(s) 18, 29, 282, 573, 1023, 1274
BveI ACCTGC 1 cut(s) 848
Cac8I GCNNGC 3 cut(s) 420, 705, 846
Cfr10I RCCGGY 2 cut(s) 517, 1397
Cfr13I GGNCC 2 cut(s) 314, 1400
CseI GACGC 2 cut(s) 872, 1322
Csp6I GTAC 2 cut(s) 710, 1237
CviQI GTAC 2 cut(s) 710, 1237
DdeI CTNAG 7 cut(s) 32, 565, 591, 768, 1046, 1365, 1453
DpnI GATC 6 cut(s) 270, 311, 548, 638, 924, 1071
DpnII GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
DrdI GACNNNNNNGTC 1 cut(s) 263
DseDI GACNNNNNNGTC 1 cut(s) 263
Eam1104I CTCTTC 1 cut(s) 1077
EarI CTCTTC 1 cut(s) 1077
Ecl136II GAGCTC 1 cut(s) 564
Eco130I CCWWGG 1 cut(s) 1356
Eco147I AGGCCT 1 cut(s) 135
Eco24I GRGCYC 1 cut(s) 566
Eco31I GGTCTC 1 cut(s) 1001
Eco47I GGWCC 1 cut(s) 1400
Eco53kI GAGCTC 1 cut(s) 564
Eco57I CTGAAG 2 cut(s) 116, 999
EcoICRI GAGCTC 1 cut(s) 564
EcoRII CCWGG 1 cut(s) 745
EcoT14I CCWWGG 1 cut(s) 1356
EcoT38I GRGCYC 1 cut(s) 566
ErhI CCWWGG 1 cut(s) 1356
FalI AAGNNNNNCTT 2 cut(s) 1103, 1135
FauI CCCGC 1 cut(s) 1255
FbaI TGATCA 1 cut(s) 546
FblI GTMKAC 2 cut(s) 255, 814
FokI GGATG 4 cut(s) 611, 762, 796, 964
FriOI GRGCYC 1 cut(s) 566
FspBI CTAG 4 cut(s) 18, 419, 642, 1404
GsaI CCCAGC 3 cut(s) 485, 1002, 1187
GsuI CTGGAG 1 cut(s) 917
HaeIII GGCC 6 cut(s) 135, 315, 607, 848, 1128, 1451
HapII CCGG 2 cut(s) 518, 1398
HgaI GACGC 2 cut(s) 872, 1322
Hin1I GRCGYC 1 cut(s) 864
HincII GTYRAC 1 cut(s) 256
HindII GTYRAC 1 cut(s) 256
HindIII AAGCTT 2 cut(s) 506, 904
HinfI GANTC 4 cut(s) 220, 340, 899, 1254
HpaII CCGG 2 cut(s) 518, 1398
HphI GGTGA 5 cut(s) 458, 872, 1127, 1277, 1319
Hpy166II GTNNAC 4 cut(s) 256, 331, 815, 1264
Hpy188I TCNGA 2 cut(s) 1345, 1394
Hpy188III TCNNGA 8 cut(s) 344, 496, 614, 642, 694, 896, 920, 1058
Hpy8I GTNNAC 4 cut(s) 256, 331, 815, 1264
Hpy99I CGWCG 2 cut(s) 269, 1569
HpyCH4III ACNGT 4 cut(s) 13, 277, 1302, 1539
HpyCH4IV ACGT 3 cut(s) 333, 1478, 1567
HpyCH4V TGCA 3 cut(s) 1093, 1413, 1468
HpyF10VI GCNNNNNNNGC 5 cut(s) 106, 141, 854, 863, 1448
HpyF3I CTNAG 7 cut(s) 32, 565, 591, 768, 1046, 1365, 1453
HpySE526I ACGT 3 cut(s) 333, 1478, 1567
Hsp92I GRCGYC 1 cut(s) 864
Ksp22I TGATCA 1 cut(s) 546
Kzo9I GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
LmnI GCTCC 6 cut(s) 127, 700, 1104, 1394, 1513, 1552
MaeI CTAG 4 cut(s) 18, 419, 642, 1404
MaeII ACGT 3 cut(s) 333, 1478, 1567
MaeIII GTNAC 4 cut(s) 7, 715, 860, 1147
MalI GATC 6 cut(s) 270, 311, 548, 638, 924, 1071
MboI GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
MboII GAAGA 9 cut(s) 115, 355, 359, 401, 687, 943, 1094, 1163, 1375
MhlI GDGCHC 3 cut(s) 566, 892, 1549
MluCI AATT 6 cut(s) 145, 943, 969, 1196, 1407, 1445
MlyI GAGTC 2 cut(s) 908, 1263
MmeI TCCRAC 1 cut(s) 576
MnlI CCTC 8 cut(s) 117, 146, 241, 571, 747, 774, 967, 1078
MroXI GAANNNNTTC 2 cut(s) 661, 1170
MseI TTAA 4 cut(s) 162, 795, 1200, 1570
MslI CAYNNNNRTG 2 cut(s) 1016, 1214
MspI CCGG 2 cut(s) 518, 1398
MspR9I CCNGG 1 cut(s) 747
MvaI CCWGG 1 cut(s) 747
MwoI GCNNNNNNNGC 5 cut(s) 106, 141, 854, 863, 1448
NdeII GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
NheI GCTAGC 1 cut(s) 418
NlaIV GGNNCC 2 cut(s) 316, 1396
NmuCI GTSAC 2 cut(s) 7, 860
NspI RCATGY 1 cut(s) 716
OliI CACNNNNGTG 1 cut(s) 1016
PaqCI CACCTGC 1 cut(s) 848
PceI AGGCCT 1 cut(s) 135
PciI ACATGT 1 cut(s) 712
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PdmI GAANNNNTTC 2 cut(s) 661, 1170
PfeI GAWTC 2 cut(s) 220, 340
PflMI CCANNNNNTGG 1 cut(s) 1541
PfoI TCCNGGA 1 cut(s) 745
PleI GAGTC 2 cut(s) 907, 1262
PpsI GAGTC 2 cut(s) 907, 1262
PscI ACATGT 1 cut(s) 712
PsiI TTATAA 1 cut(s) 1523
Psp124BI GAGCTC 1 cut(s) 566
Psp6I CCWGG 1 cut(s) 745
PspFI CCCAGC 3 cut(s) 481, 998, 1183
PspGI CCWGG 1 cut(s) 745
PspN4I GGNNCC 2 cut(s) 316, 1396
PspPI GGNCC 2 cut(s) 314, 1400
RsaI GTAC 2 cut(s) 711, 1238
RsaNI GTAC 2 cut(s) 710, 1237
RseI CAYNNNNRTG 2 cut(s) 1016, 1214
SacI GAGCTC 1 cut(s) 566
SalI GTCGAC 1 cut(s) 254
SaqAI TTAA 4 cut(s) 162, 795, 1200, 1570
Sau3AI GATC 6 cut(s) 268, 309, 546, 636, 922, 1069
Sau96I GGNCC 2 cut(s) 314, 1400
ScaI AGTACT 1 cut(s) 1238
SchI GAGTC 2 cut(s) 908, 1263
ScrFI CCNGG 1 cut(s) 747
SduI GDGCHC 3 cut(s) 566, 892, 1549
SinI GGWCC 1 cut(s) 1400
SmiMI CAYNNNNRTG 2 cut(s) 1016, 1214
Sse9I AATT 6 cut(s) 145, 943, 969, 1196, 1407, 1445
SseBI AGGCCT 1 cut(s) 135
SsiI CCGC 2 cut(s) 248, 1248
SspI AATATT 1 cut(s) 684
SspMI CTAG 4 cut(s) 18, 419, 642, 1404
SstI GAGCTC 1 cut(s) 566
StuI AGGCCT 1 cut(s) 135
StyD4I CCNGG 1 cut(s) 745
StyI CCWWGG 1 cut(s) 1356
TaaI ACNGT 4 cut(s) 13, 277, 1302, 1539
TaiI ACGT 3 cut(s) 336, 1481, 1570
TaqI TCGA 8 cut(s) 255, 267, 495, 1072, 1174, 1204, 1257, 1564
TasI AATT 6 cut(s) 145, 943, 969, 1196, 1407, 1445
TatI WGTACW 2 cut(s) 709, 1236
TfiI GAWTC 2 cut(s) 220, 340
Tru1I TTAA 4 cut(s) 162, 795, 1200, 1570
Tru9I TTAA 4 cut(s) 162, 795, 1200, 1570
TscAI CASTG 6 cut(s) 18, 36, 282, 573, 1023, 1281
TseFI GTSAC 2 cut(s) 7, 860
Tsp45I GTSAC 2 cut(s) 7, 860
TspGWI ACGGA 2 cut(s) 303, 1451
TspRI CASTG 6 cut(s) 18, 36, 282, 573, 1023, 1281
Van91I CCANNNNNTGG 1 cut(s) 1541
VpaK11BI GGWCC 1 cut(s) 1400
XapI RAATTY 3 cut(s) 943, 1196, 1407
XbaI TCTAGA 1 cut(s) 641
XceI RCATGY 1 cut(s) 716
XmiI GTMKAC 2 cut(s) 255, 814
XmnI GAANNNNTTC 2 cut(s) 661, 1170
XspI CTAG 4 cut(s) 18, 419, 642, 1404
ZrmI AGTACT 1 cut(s) 1238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.