Rmu_sc0004165.1_g000092

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004165.1
OG0000169
Physical Location & Seq
Reverse (-)
350584 .. 352027
1444 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004165.1_g000092.1.cds

Sequence Viewer

Length: 1263 bp
atggcctctattgacgccgttacggccagttttgcagcctcccttgccctcgctgaagggggaagagccccggacctggggaagatcggtggcggccctgtgcgccgatcttctcaatcattctttcttggcaagcctttgactcgtaagacggtggattccaaggagcctcccttgccctcgctgaagggggaagagccccggacctggggaagatcggtggcggccctgtgcgccgatcttctcaacattctttcttggcaagcctttgactcggttcaggataaacctggagatatcttcctgttctcttttgactcgatgcgtgaccgcaacaagatactccgaggtggggtttggtgctttgatcgagccccagtttgctttgtagaatatgatggtgtcaagcctctccaggagatccagttccaacatatccgtatttgggttagggtttcgggaattccccctttgtatgaagaaccagaaaactttattctcgttggtaatctcttaggcggctttttggattttgataagaaggaaattaagaaaggagtcatccggatcttgatctcccatgacatctccaagccagtcctgctggagcgacaggtttttttggataagggcgtggaaccgacgctacactttcagtttgagcatctcaaaggcaggtgctcacagtgtgggctcttcatacacgctgggatctcctgtgagatgccgaatgttgctatcacaacacctagggcttcacactttccgggatcatcatcttcgggtggttccttttcttttacagcccagaacaagagggatttcttcaccacgccctccactatccctaagaaaaagaagcccacgatcagaagactagaccgctctgttcttatctcccccacgcaggctgaatcactgctagtttcggactcagttgatggagttcctggtgtttcagcgttggcgcatgaactagaacaaaatcaagttttagatgggaatgagcatactggtgctagtttgggacaagctgttggcggggatattgaccgtgtgcaggctgatgctctgggattgagggatatggacaatgatgttccgctggttactctgaagaagaagttgggtcgtcccttgggcagtaggaacaagcaacaacggtctggcaagctgcagggtgttgctactctgaggctcacctatcctactacaggtggttcgacctctagccctagagcaaagggcaaagggaaactttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

420

Amino Acids

45.68

Weight (kDa)

9.36

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 666
Acc36I ACCTGC 1 cut(s) 666
AccBSI CCGCTC 1 cut(s) 885
AccIII TCCGGA 1 cut(s) 564
AciI CCGC 7 cut(s) 93, 224, 331, 519, 883, 1041, 1103
AclWI GGATC 4 cut(s) 415, 575, 719, 778
AcoI YGGCCR 1 cut(s) 24
AcsI RAATTY 1 cut(s) 462
AcuI CTGAAG 3 cut(s) 75, 206, 1136
AcyI GRCGYC 1 cut(s) 15
AdeI CACNNNGTG 1 cut(s) 689
AfiI CCNNNNNNNGG 9 cut(s) 76, 77, 207, 208, 352, 445, 907, 1060, 1214
AjnI CCWGG 5 cut(s) 75, 206, 289, 414, 949
AjuI GAANNNNNNNTTGG 2 cut(s) 1109, 1141
AloI GAACNNNNNNTCC 2 cut(s) 410, 442
AluBI AGCT 2 cut(s) 1034, 1174
AluI AGCT 2 cut(s) 1034, 1174
Alw21I GWGCWC 1 cut(s) 683
AlwI GGATC 4 cut(s) 415, 575, 719, 778
Aor13HI TCCGGA 1 cut(s) 564
AoxI GGCC 4 cut(s) 3, 24, 94, 225
ApeKI GCWGC 2 cut(s) 35, 1174
ApoI RAATTY 1 cut(s) 462
AspA2I CCTAGG 1 cut(s) 749
AspLEI GCGC 3 cut(s) 105, 236, 970
AspS9I GGNCC 4 cut(s) 73, 95, 204, 226
AsuC2I CCSGG 3 cut(s) 71, 202, 768
AsuHPI GGTGA 2 cut(s) 820, 1192
AvaII GGWCC 2 cut(s) 73, 204
AvrII CCTAGG 1 cut(s) 749
BanII GRGCYC 4 cut(s) 70, 201, 376, 696
BbsI GAAGAC 1 cut(s) 880
Bbv12I GWGCWC 1 cut(s) 683
BbvI GCAGC 2 cut(s) 47, 1161
BccI CCATC 3 cut(s) 392, 935, 992
BceAI ACGGC 2 cut(s) 2, 39
BciT130I CCWGG 5 cut(s) 77, 208, 291, 416, 951
BcnI CCSGG 3 cut(s) 71, 202, 768
BfaI CTAG 7 cut(s) 750, 878, 923, 977, 1020, 1230, 1236
BfmI CTRYAG 2 cut(s) 1175, 1212
BfuAI ACCTGC 1 cut(s) 666
BglI GCCNNNNNGGC 1 cut(s) 23
BisI GCNGC 5 cut(s) 36, 94, 225, 520, 1175
BlnI CCTAGG 1 cut(s) 749
BlsI GCNGC 5 cut(s) 37, 95, 226, 521, 1176
Bme1390I CCNGG 8 cut(s) 71, 77, 202, 208, 291, 416, 768, 951
Bme18I GGWCC 2 cut(s) 73, 204
BmgT120I GGNCC 4 cut(s) 73, 95, 204, 226
BmiI GGNNCC 3 cut(s) 168, 639, 790
BmrFI CCNGG 8 cut(s) 71, 77, 202, 208, 291, 416, 768, 951
BmrI ACTGGG 1 cut(s) 371
BmsI GCATC 4 cut(s) 312, 673, 714, 1057
BmuI ACTGGG 1 cut(s) 371
BpiI GAAGAC 1 cut(s) 880
BpmI CTGGAG 3 cut(s) 312, 398, 626
BpuMI CCSGG 3 cut(s) 71, 202, 768
BsaBI GATNNNNATC 2 cut(s) 572, 775
BsaHI GRCGYC 1 cut(s) 15
BsaJI CCNNGG 8 cut(s) 69, 76, 162, 200, 207, 346, 749, 1137
BsaWI WCCGGW 1 cut(s) 564
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 9 cut(s) 76, 77, 207, 208, 352, 445, 907, 1060, 1214
Bse1I ACTGG 5 cut(s) 27, 377, 424, 596, 1018
Bse8I GATNNNNATC 2 cut(s) 572, 775
BseAI TCCGGA 1 cut(s) 564
BseBI CCWGG 5 cut(s) 77, 208, 291, 416, 951
BseDI CCNNGG 8 cut(s) 69, 76, 162, 200, 207, 346, 749, 1137
BseGI GGATG 1 cut(s) 561
BseJI GATNNNNATC 2 cut(s) 572, 775
BseLI CCNNNNNNNGG 9 cut(s) 76, 77, 207, 208, 352, 445, 907, 1060, 1214
BseMII CTCAG 2 cut(s) 948, 1184
BseNI ACTGG 5 cut(s) 27, 377, 424, 596, 1018
BseXI GCAGC 2 cut(s) 47, 1161
BseYI CCCAGC 1 cut(s) 707
BsgI GTGCAG 1 cut(s) 1079
BshFI GGCC 4 cut(s) 5, 26, 96, 227
BsiHKAI GWGCWC 1 cut(s) 683
BsiSI CCGG 4 cut(s) 71, 202, 565, 767
BslFI GGGAC 2 cut(s) 1041, 1119
BslI CCNNNNNNNGG 9 cut(s) 76, 77, 207, 208, 352, 445, 907, 1060, 1214
BsmFI GGGAC 2 cut(s) 1041, 1119
BsnI GGCC 4 cut(s) 5, 26, 96, 227
Bsp1286I GDGCHC 5 cut(s) 70, 201, 376, 683, 696
Bsp13I TCCGGA 1 cut(s) 564
BspACI CCGC 7 cut(s) 93, 224, 331, 519, 883, 1041, 1103
BspANI GGCC 4 cut(s) 5, 26, 96, 227
BspCNI CTCAG 2 cut(s) 947, 1185
BspEI TCCGGA 1 cut(s) 564
BspLI GGNNCC 3 cut(s) 168, 639, 790
BspMAI CTGCAG 1 cut(s) 1179
BspMI ACCTGC 1 cut(s) 666
BspPI GGATC 4 cut(s) 415, 575, 719, 778
BspQI GCTCTTC 3 cut(s) 58, 189, 701
BsrBI CCGCTC 1 cut(s) 885
BsrI ACTGG 5 cut(s) 27, 377, 424, 596, 1018
BssECI CCNNGG 8 cut(s) 69, 76, 162, 200, 207, 346, 749, 1137
BssNI GRCGYC 1 cut(s) 15
BssT1I CCWWGG 3 cut(s) 162, 749, 1137
Bst2UI CCWGG 5 cut(s) 77, 208, 291, 416, 951
Bst4CI ACNGT 4 cut(s) 154, 687, 1055, 1164
Bst6I CTCTTC 3 cut(s) 58, 189, 701
BstACI GRCGYC 1 cut(s) 15
BstC8I GCNNGC 5 cut(s) 134, 264, 909, 1062, 1172
BstDEI CTNAG 4 cut(s) 514, 849, 934, 1193
BstENI CCTNNNNNAGG 1 cut(s) 1212
BstF5I GGATG 1 cut(s) 561
BstHHI GCGC 3 cut(s) 105, 236, 970
BstMWI GCNNNNNNNGC 7 cut(s) 23, 32, 44, 102, 175, 233, 601
BstNI CCWGG 5 cut(s) 77, 208, 291, 416, 951
BstSCI CCNGG 8 cut(s) 69, 75, 200, 206, 289, 414, 766, 949
BstSFI CTRYAG 2 cut(s) 1175, 1212
BstV1I GCAGC 2 cut(s) 47, 1161
BstV2I GAAGAC 1 cut(s) 880
BstX2I RGATCY 3 cut(s) 420, 567, 711
BstYI RGATCY 3 cut(s) 420, 567, 711
BsuRI GGCC 4 cut(s) 5, 26, 96, 227
BtsCI GGATG 1 cut(s) 561
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 2 cut(s) 692, 917
BveI ACCTGC 1 cut(s) 666
Cac8I GCNNGC 5 cut(s) 134, 264, 909, 1062, 1172
CfoI GCGC 3 cut(s) 105, 236, 970
Cfr13I GGNCC 4 cut(s) 73, 95, 204, 226
CseI GACGC 2 cut(s) 23, 652
CviAII CATG 2 cut(s) 581, 971
DdeI CTNAG 4 cut(s) 514, 849, 934, 1193
DraIII CACNNNGTG 1 cut(s) 689
EaeI YGGCCR 1 cut(s) 24
Eam1104I CTCTTC 3 cut(s) 58, 189, 701
EarI CTCTTC 3 cut(s) 58, 189, 701
Eco130I CCWWGG 3 cut(s) 162, 749, 1137
Eco24I GRGCYC 4 cut(s) 70, 201, 376, 696
Eco32I GATATC 1 cut(s) 298
Eco47I GGWCC 2 cut(s) 73, 204
Eco57I CTGAAG 3 cut(s) 75, 206, 1136
EcoNI CCTNNNNNAGG 1 cut(s) 1212
EcoRI GAATTC 1 cut(s) 462
EcoRII CCWGG 5 cut(s) 75, 206, 289, 414, 949
EcoRV GATATC 1 cut(s) 298
EcoT14I CCWWGG 3 cut(s) 162, 749, 1137
EcoT38I GRGCYC 4 cut(s) 70, 201, 376, 696
ErhI CCWWGG 3 cut(s) 162, 749, 1137
FaeI CATG 2 cut(s) 584, 974
FaiI YATR 8 cut(s) 396, 435, 477, 582, 701, 972, 1011, 1088
FalI AAGNNNNNCTT 1 cut(s) 1242
FaqI GGGAC 2 cut(s) 1041, 1119
FatI CATG 2 cut(s) 580, 970
FauI CCCGC 1 cut(s) 1034
Fnu4HI GCNGC 5 cut(s) 36, 94, 225, 520, 1175
FokI GGATG 1 cut(s) 548
FriOI GRGCYC 4 cut(s) 70, 201, 376, 696
Fsp4HI GCNGC 5 cut(s) 36, 94, 225, 520, 1175
FspBI CTAG 7 cut(s) 750, 878, 923, 977, 1020, 1230, 1236
GlaI GCGC 3 cut(s) 104, 235, 969
GluI GCNGC 5 cut(s) 36, 94, 225, 520, 1175
GsaI CCCAGC 1 cut(s) 711
GsuI CTGGAG 3 cut(s) 312, 398, 626
HaeIII GGCC 4 cut(s) 5, 26, 96, 227
HapII CCGG 4 cut(s) 71, 202, 565, 767
HgaI GACGC 2 cut(s) 23, 652
HhaI GCGC 3 cut(s) 105, 236, 970
Hin1I GRCGYC 1 cut(s) 15
Hin1II CATG 2 cut(s) 584, 974
Hin6I GCGC 3 cut(s) 103, 234, 968
HinP1I GCGC 3 cut(s) 103, 234, 968
HinfI GANTC 7 cut(s) 142, 158, 272, 317, 558, 914, 932
HpaII CCGG 4 cut(s) 71, 202, 565, 767
HphI GGTGA 2 cut(s) 820, 1192
Hpy188I TCNGA 5 cut(s) 347, 872, 931, 1116, 1194
Hpy188III TCNNGA 4 cut(s) 281, 459, 565, 571
Hpy99I CGWCG 1 cut(s) 646
HpyAV CCTTC 3 cut(s) 50, 181, 535
HpyCH4III ACNGT 4 cut(s) 154, 687, 1055, 1164
HpyCH4V TGCA 3 cut(s) 35, 1060, 1177
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 32, 44, 102, 175, 233, 601
HpyF3I CTNAG 4 cut(s) 514, 849, 934, 1193
Hsp92I GRCGYC 1 cut(s) 15
Hsp92II CATG 2 cut(s) 584, 974
HspAI GCGC 3 cut(s) 103, 234, 968
Kpn2I TCCGGA 1 cut(s) 564
LguI GCTCTTC 3 cut(s) 58, 189, 701
LmnI GCTCC 2 cut(s) 166, 607
Lsp1109I GCAGC 2 cut(s) 47, 1161
LweI GCATC 4 cut(s) 312, 673, 714, 1057
MaeI CTAG 7 cut(s) 750, 878, 923, 977, 1020, 1230, 1236
MaeIII GTNAC 3 cut(s) 19, 326, 1108
MbiI CCGCTC 1 cut(s) 885
MflI RGATCY 3 cut(s) 420, 567, 711
MhlI GDGCHC 5 cut(s) 70, 201, 376, 683, 696
MluCI AATT 2 cut(s) 462, 546
MlyI GAGTC 5 cut(s) 136, 266, 311, 567, 926
MmeI TCCRAC 1 cut(s) 454
MroI TCCGGA 1 cut(s) 564
MseI TTAA 1 cut(s) 549
MslI CAYNNNNRTG 1 cut(s) 1014
MspA1I CMGCKG 1 cut(s) 1105
MspI CCGG 4 cut(s) 71, 202, 565, 767
MspR9I CCNGG 8 cut(s) 71, 77, 202, 208, 291, 416, 768, 951
MvaI CCWGG 5 cut(s) 77, 208, 291, 416, 951
MwoI GCNNNNNNNGC 7 cut(s) 23, 32, 44, 102, 175, 233, 601
NciI CCSGG 3 cut(s) 71, 202, 768
NlaIII CATG 2 cut(s) 584, 974
NlaIV GGNNCC 3 cut(s) 168, 639, 790
NmuCI GTSAC 1 cut(s) 326
PaqCI CACCTGC 1 cut(s) 666
PciSI GCTCTTC 3 cut(s) 58, 189, 701
PfeI GAWTC 2 cut(s) 158, 914
PfoI TCCNGGA 2 cut(s) 414, 766
PkrI GCNGC 5 cut(s) 37, 95, 226, 521, 1176
PleI GAGTC 5 cut(s) 136, 266, 311, 566, 926
PpsI GAGTC 5 cut(s) 136, 266, 311, 566, 926
Psp6I CCWGG 5 cut(s) 75, 206, 289, 414, 949
PspFI CCCAGC 1 cut(s) 707
PspGI CCWGG 5 cut(s) 75, 206, 289, 414, 949
PspN4I GGNNCC 3 cut(s) 168, 639, 790
PspPI GGNCC 4 cut(s) 73, 95, 204, 226
PsrI GAACNNNNNNTAC 2 cut(s) 630, 662
PstI CTGCAG 1 cut(s) 1179
PsuI RGATCY 3 cut(s) 420, 567, 711
RseI CAYNNNNRTG 1 cut(s) 1014
SapI GCTCTTC 3 cut(s) 58, 189, 701
SaqAI TTAA 1 cut(s) 549
SatI GCNGC 5 cut(s) 36, 94, 225, 520, 1175
Sau96I GGNCC 4 cut(s) 73, 95, 204, 226
SchI GAGTC 5 cut(s) 136, 266, 311, 567, 926
ScrFI CCNGG 8 cut(s) 71, 77, 202, 208, 291, 416, 768, 951
SduI GDGCHC 5 cut(s) 70, 201, 376, 683, 696
SfaNI GCATC 4 cut(s) 312, 673, 714, 1057
SfcI CTRYAG 2 cut(s) 1175, 1212
SinI GGWCC 2 cut(s) 73, 204
SmiMI CAYNNNNRTG 1 cut(s) 1014
Sse9I AATT 2 cut(s) 462, 546
SsiI CCGC 7 cut(s) 93, 224, 331, 519, 883, 1041, 1103
SspMI CTAG 7 cut(s) 750, 878, 923, 977, 1020, 1230, 1236
StyD4I CCNGG 8 cut(s) 69, 75, 200, 206, 289, 414, 766, 949
StyI CCWWGG 3 cut(s) 162, 749, 1137
TaaI ACNGT 4 cut(s) 154, 687, 1055, 1164
TaqI TCGA 3 cut(s) 320, 370, 1223
TasI AATT 2 cut(s) 462, 546
TauI GCSGC 3 cut(s) 96, 227, 522
TfiI GAWTC 2 cut(s) 158, 914
Tru1I TTAA 1 cut(s) 549
Tru9I TTAA 1 cut(s) 549
TscAI CASTG 2 cut(s) 692, 924
TseFI GTSAC 1 cut(s) 326
TseI GCWGC 2 cut(s) 35, 1174
Tsp45I GTSAC 1 cut(s) 326
TspDTI ATGAA 3 cut(s) 492, 688, 987
TspGWI ACGGA 1 cut(s) 428
TspRI CASTG 2 cut(s) 692, 924
VpaK11BI GGWCC 2 cut(s) 73, 204
XagI CCTNNNNNAGG 1 cut(s) 1212
XapI RAATTY 1 cut(s) 462
XmaJI CCTAGG 1 cut(s) 749
XspI CTAG 7 cut(s) 750, 878, 923, 977, 1020, 1230, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.