FvH4_3g26062

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000169
Physical Location & Seq
Reverse (-)
18913840 .. 18915107
1268 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g26062.t1

Sequence Viewer

Length: 1164 bp
ATGGCCTCCAATCCCTCCATTGATGTTGTCACAGCAAGTTTTGCCGCTTCCTTGGCTTTGGCCGTTGGCGGATCTGCTCCTGACCTTGGTAAGATTGGGGGTGGTCCTGTCCGTCGGTCCTCCCAATCTTTTCTGCTAGGTCGACCTTTAACACAGCATCCTGTGGATCCACCTGGCTTCATCAATCACTTTCATCGGACTTGGATTGTCAACCATCCTCTCCGGATTCAAGAAAGAGCAAAGAATCTTTTTCTGGTCTGTTTTCAGATTGCCTCTGATCGCAACAAGGTTCTTAAGGGAGGAGTATGGTGCTTTGAACGTGCTCCTGTGTGTTTGGAGCCCTATGATGGTATCCTTCCCTTAGCCGAGGTCTTGATGCGCCATGTGCGAATTTGGACTAGGGTTTTGGGCGAACCACCTGTTTTTGAAGAACCCGATAATCTCAAGTTGGTGGGCAACCTCCTCGGTGGTTTTGTCGACTATGATAAGAAGGAATTCGTGTCGGGTAAGATGCGTATTATATTTACACATGATATATCGAAACCTATCTTGCTTGAACGCAGTGTGTTCCTATCTAAGGGAGTAGCACCATTGCTAAAATTTGAGTATGAACACCTTCAAGGATGTTGCTCAGTCTGTTGGCTTGTCACCCATTCTGGAATCAGTTGTGAGGAGCGACCGGCTCCTAACCCGGTAGCTAGATCTCTGAATTTCCCTCATTCAGCCCCTCCATTTGGTTATGCTTTTGCGGCTAAACCTCCAGGGTCTTTGGTAGAGGCTGCCTCTGCACAACCAAAGAAGAAGGAGAAGAAGAAACCGGTAATTAGGTCTTTGGAGTCAGCAGAGGCAACAAATTTGGCGGCAGCAGCTACTTCCTCCAGTAAGAGAGAAAGACAAGGGCATTACACCCCTTCTCCTAAGAAACTCAAAACCATCCTTGGGGGAAAGGTTCCTGTGTTGCATGCTGAATCTCTAGGGCTATTAGAGTTTGATCTTGACTCAACCCTGGTCTCGCAGAAGAAGAAGGTTGGTAGGCCTCTTGGTAGCCTTAACAAAGTACCAAAGCCTGCGAAGGATTTGGTTACTCCGCCTCTACGTATCTCAACACCCAAGTTTGGTAGGGGAGAGGTTAGCCCTAACAACAAGGGCAAGGAGGTAGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

388

Amino Acids

42.14

Weight (kDa)

9.69

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 178 - 224 2.9e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000169)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13681 FvH4_3g25832 FvH4_3g26062 FvH4_4g08041 FvH4_4g13361 FvH4_4g16721 FvH4_4g21881 FvH4_6g07632 FvH4_6g17062 FvH4_6g26370 FvH4_7g07641
rosa_chinensis RchiOBHm_Chr1g0320861 RchiOBHm_Chr2g0109251 RchiOBHm_Chr3g0472781 RchiOBHm_Chr6g0288921 RchiOBHm_Chr7g0191711 RchiOBHm_Chr7g0238801
rosa_laevigata RLG00000007550 RLG00000036731
rosa_multiflora Rmu_co8018808.1_g000001 Rmu_co8401665.1_g000001 Rmu_co8461051.1_g000001 Rmu_sc0000144.1_g000042 Rmu_sc0000144.1_g000051 Rmu_sc0000160.1_g000018 Rmu_sc0000245.1_g000011 Rmu_sc0000299.1_g000021 Rmu_sc0000348.1_g000003 Rmu_sc0000367.1_g000120 Rmu_sc0000424.1_g000037 Rmu_sc0000427.1_g000006 Rmu_sc0000427.1_g000023 Rmu_sc0000427.1_g000037 Rmu_sc0000604.1_g000005 Rmu_sc0000605.1_g000060 Rmu_sc0000621.1_g000030 Rmu_sc0000693.1_g000017 Rmu_sc0000708.1_g000012 Rmu_sc0000918.1_g000031 Rmu_sc0000953.1_g000027 Rmu_sc0001030.1_g000008 Rmu_sc0001030.1_g000011 Rmu_sc0001051.1_g000026 Rmu_sc0001055.1_g000001 Rmu_sc0001081.1_g000001 Rmu_sc0001175.1_g000002 Rmu_sc0001176.1_g000026 Rmu_sc0001181.1_g000010 Rmu_sc0001225.1_g000003 Rmu_sc0001371.1_g000008 Rmu_sc0001433.1_g000012 Rmu_sc0001507.1_g000009 Rmu_sc0001643.1_g000014 Rmu_sc0001879.1_g000002 Rmu_sc0001890.1_g000006 Rmu_sc0002129.1_g000039 Rmu_sc0002356.1_g000008 Rmu_sc0002358.1_g000003 Rmu_sc0002553.1_g000024 Rmu_sc0002826.1_g000007 Rmu_sc0002872.1_g000007 Rmu_sc0003323.1_g000026 Rmu_sc0003410.1_g000001 Rmu_sc0003511.1_g000042 Rmu_sc0003541.1_g000036 Rmu_sc0003605.1_g000048 Rmu_sc0003689.1_g000014 Rmu_sc0003692.1_g000010 Rmu_sc0003720.1_g000001 Rmu_sc0003813.1_g000003 Rmu_sc0003872.1_g000005 Rmu_sc0004010.1_g000012 Rmu_sc0004165.1_g000092 Rmu_sc0004230.1_g000013 Rmu_sc0004318.1_g000020 Rmu_sc0004353.1_g000004 Rmu_sc0004617.1_g000005 Rmu_sc0004617.1_g000006 Rmu_sc0004658.1_g000005 Rmu_sc0005356.1_g000008 Rmu_sc0005994.1_g000014 Rmu_sc0006388.1_g000004 Rmu_sc0006674.1_g000020 Rmu_sc0006898.1_g000008 Rmu_sc0007286.1_g000005 Rmu_sc0007476.1_g000002 Rmu_sc0007671.1_g000005 Rmu_sc0007991.1_g000008 Rmu_sc0008131.1_g000008 Rmu_sc0008163.1_g000011 Rmu_sc0008322.1_g000004 Rmu_sc0008334.1_g000017 Rmu_sc0008835.1_g000009 Rmu_sc0008835.1_g000011 Rmu_sc0009954.1_g000006 Rmu_sc0010050.1_g000001 Rmu_sc0010317.1_g000011 Rmu_sc0010426.1_g000002 Rmu_sc0011111.1_g000005 Rmu_sc0014614.1_g000003 Rmu_sc0014688.1_g000002 Rmu_sc0015167.1_g000003 Rmu_sc0015936.1_g000003 Rmu_sc0017323.1_g000003 Rmu_sc0018541.1_g000001 Rmu_sc0019370.1_g000003 Rmu_sc0020444.1_g000001 Rmu_sc0020600.1_g000003 Rmu_sc0021238.1_g000001 Rmu_sc0022909.1_g000001 Rmu_sc0030397.1_g000001 Rmu_sc0030484.1_g000002 Rmu_sc0035139.1_g000001 Rmu_sc0035719.1_g000001 Rmu_ssc0000287.1_g000010 Rmu_ssc0000451.1_g000005
rosa_roxburghii Rroxscaffold_1G00046590 Rroxscaffold_1G00050100 Rroxscaffold_2G00079390 Rroxscaffold_2G00088790 Rroxscaffold_2G00097170 Rroxscaffold_2G00126350 Rroxscaffold_3G00221550 Rroxscaffold_3G00222700 Rroxscaffold_3G00236390 Rroxscaffold_3G00254000 Rroxscaffold_3G00260090 Rroxscaffold_3G00263600 Rroxscaffold_5G00336900
rosa_rugosa Rorug01G0048200 Rorug01G0172000 Rorug01G0294000 Rorug01G0308200 Rorug01G0355300 Rorug02G0000900 Rorug02G0129600 Rorug02G0136800 Rorug02G0179700 Rorug02G0251500 Rorug02G0305800 Rorug02G0305900 Rorug02G0373800 Rorug02G0396100 Rorug02G0411300 Rorug02G0411400 Rorug02G0411500 Rorug02G0460200 Rorug03G0187400 Rorug03G0299000 Rorug04G0041700 Rorug04G0130800 Rorug04G0168300 Rorug04G0198700 Rorug05G0095100 Rorug05G0194100 Rorug05G0205300 Rorug05G0235300 Rorug06G0088100.1 Rorug06G0120100 Rorug06G0164300 Rorug07G0163600 Rorug07G0163700 Rorug07G0236200 Rorug07G0307200 RorugPtG0006100
rosa_samantha Rh1DG036900 Rh3BG176200 Rh4CG455100 Rh6AG142400 Rh6AG263000 Rh6CG138900 Rh6DG126200 Rh7CG393300 Rh7CG447500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 142, 477
AccIII TCCGGA 1 cut(s) 222
AciI CCGC 5 cut(s) 45, 69, 749, 860, 1088
AclWI GGATC 3 cut(s) 79, 161, 174
AcoI YGGCCR 1 cut(s) 60
AcsI RAATTY 5 cut(s) 390, 494, 599, 709, 853
AfaI GTAC 1 cut(s) 1059
AfiI CCNNNNNNNGG 6 cut(s) 86, 347, 577, 734, 939, 1115
AflII CTTAAG 1 cut(s) 293
AgeI ACCGGT 1 cut(s) 817
AgsI TTSAA 5 cut(s) 230, 317, 428, 557, 620
AjnI CCWGG 3 cut(s) 172, 760, 1005
AluBI AGCT 2 cut(s) 698, 869
AluI AGCT 2 cut(s) 698, 869
Alw21I GWGCWC 1 cut(s) 325
Alw26I GTCTC 1 cut(s) 1015
AlwI GGATC 3 cut(s) 79, 161, 174
Aor13HI TCCGGA 1 cut(s) 222
AoxI GGCC 3 cut(s) 3, 60, 1034
ApeKI GCWGC 3 cut(s) 779, 863, 866
ApoI RAATTY 5 cut(s) 390, 494, 599, 709, 853
ArsI GACNNNNNNTTYG 2 cut(s) 388, 420
AsiGI ACCGGT 1 cut(s) 817
Asp700I GAANNNNTTC 2 cut(s) 494, 615
AspLEI GCGC 1 cut(s) 381
AspS9I GGNCC 2 cut(s) 104, 117
AsuC2I CCSGG 1 cut(s) 692
AsuHPI GGTGA 1 cut(s) 640
AvaII GGWCC 2 cut(s) 104, 117
BamHI GGATCC 1 cut(s) 166
BanII GRGCYC 1 cut(s) 342
Bbv12I GWGCWC 1 cut(s) 325
BbvI GCAGC 3 cut(s) 766, 875, 878
BccI CCATC 3 cut(s) 222, 341, 941
BceAI ACGGC 1 cut(s) 47
BcgI CGANNNNNNTGC 2 cut(s) 445, 479
BciT130I CCWGG 3 cut(s) 174, 762, 1007
BciVI GTATCC 1 cut(s) 362
BcnI CCSGG 1 cut(s) 692
BcoDI GTCTC 1 cut(s) 1015
BfaI CTAG 4 cut(s) 137, 399, 699, 974
BfrI CTTAAG 1 cut(s) 293
BfuI GTATCC 1 cut(s) 362
BglII AGATCT 1 cut(s) 701
BisI GCNGC 6 cut(s) 45, 750, 780, 861, 864, 867
BlsI GCNGC 6 cut(s) 46, 751, 781, 862, 865, 868
Bme1390I CCNGG 4 cut(s) 174, 692, 762, 1007
Bme18I GGWCC 2 cut(s) 104, 117
BmgT120I GGNCC 2 cut(s) 104, 117
BmiI GGNNCC 4 cut(s) 168, 339, 684, 951
BmrFI CCNGG 4 cut(s) 174, 692, 762, 1007
BmsI GCATC 3 cut(s) 166, 366, 501
BplI GAGNNNNNCTC 2 cut(s) 767, 799
BpmI CTGGAG 2 cut(s) 744, 862
Bpu10I CCTNAGC 1 cut(s) 361
BpuEI CTTGAG 1 cut(s) 428
BpuMI CCSGG 1 cut(s) 692
BsaAI YACGTR 1 cut(s) 1097
BsaI GGTCTC 1 cut(s) 1015
BsaJI CCNNGG 7 cut(s) 51, 85, 366, 463, 761, 937, 1005
BsaWI WCCGGW 2 cut(s) 222, 817
BsaXI ACNNNNNCTCC 3 cut(s) 898, 928, 1145
Bsc4I CCNNNNNNNGG 6 cut(s) 86, 347, 577, 734, 939, 1115
Bse118I RCCGGY 2 cut(s) 679, 817
Bse1I ACTGG 1 cut(s) 879
Bse3DI GCAATG 1 cut(s) 590
BseAI TCCGGA 1 cut(s) 222
BseBI CCWGG 3 cut(s) 174, 762, 1007
BseDI CCNNGG 7 cut(s) 51, 85, 366, 463, 761, 937, 1005
BseGI GGATG 4 cut(s) 157, 214, 629, 933
BseLI CCNNNNNNNGG 6 cut(s) 86, 347, 577, 734, 939, 1115
BseMI GCAATG 1 cut(s) 590
BseMII CTCAG 1 cut(s) 645
BseNI ACTGG 1 cut(s) 879
BseRI GAGGAG 3 cut(s) 315, 452, 686
BseXI GCAGC 3 cut(s) 766, 875, 878
BsgI GTGCAG 1 cut(s) 771
Bsh1285I CGRYCG 1 cut(s) 680
BshFI GGCC 3 cut(s) 5, 62, 1036
BshTI ACCGGT 1 cut(s) 817
BsiEI CGRYCG 1 cut(s) 680
BsiHKAI GWGCWC 1 cut(s) 325
BsiSI CCGG 4 cut(s) 223, 680, 692, 818
BslI CCNNNNNNNGG 6 cut(s) 86, 347, 577, 734, 939, 1115
BsmAI GTCTC 1 cut(s) 1015
BsnI GGCC 3 cut(s) 5, 62, 1036
Bso31I GGTCTC 1 cut(s) 1015
Bsp1286I GDGCHC 2 cut(s) 325, 342
Bsp13I TCCGGA 1 cut(s) 222
Bsp143I GATC 5 cut(s) 71, 166, 277, 701, 991
BspACI CCGC 5 cut(s) 45, 69, 749, 860, 1088
BspANI GGCC 3 cut(s) 5, 62, 1036
BspCNI CTCAG 1 cut(s) 644
BspEI TCCGGA 1 cut(s) 222
BspLI GGNNCC 4 cut(s) 168, 339, 684, 951
BspPI GGATC 3 cut(s) 79, 161, 174
BspTI CTTAAG 1 cut(s) 293
BspTNI GGTCTC 1 cut(s) 1015
BsrDI GCAATG 1 cut(s) 590
BsrFI RCCGGY 2 cut(s) 679, 817
BsrI ACTGG 1 cut(s) 879
BssAI RCCGGY 2 cut(s) 679, 817
BssECI CCNNGG 7 cut(s) 51, 85, 366, 463, 761, 937, 1005
BssMI GATC 5 cut(s) 71, 166, 277, 701, 991
BssT1I CCWWGG 3 cut(s) 51, 85, 937
Bst2UI CCWGG 3 cut(s) 174, 762, 1007
BstAFI CTTAAG 1 cut(s) 293
BstAPI GCANNNNNTGC 1 cut(s) 41
BstBAI YACGTR 1 cut(s) 1097
BstC8I GCNNGC 2 cut(s) 963, 1068
BstDEI CTNAG 4 cut(s) 361, 576, 631, 918
BstENI CCTNNNNNAGG 1 cut(s) 575
BstF5I GGATG 4 cut(s) 157, 214, 629, 933
BstHHI GCGC 1 cut(s) 381
BstKTI GATC 5 cut(s) 74, 169, 280, 704, 994
BstMAI GTCTC 1 cut(s) 1015
BstMBI GATC 5 cut(s) 71, 166, 277, 701, 991
BstMCI CGRYCG 1 cut(s) 680
BstMWI GCNNNNNNNGC 6 cut(s) 41, 53, 385, 749, 785, 866
BstNI CCWGG 3 cut(s) 174, 762, 1007
BstNSI RCATGY 1 cut(s) 965
BstSCI CCNGG 4 cut(s) 172, 690, 760, 1005
BstSNI TACGTA 1 cut(s) 1097
BstV1I GCAGC 3 cut(s) 766, 875, 878
BstX2I RGATCY 3 cut(s) 71, 166, 701
BstYI RGATCY 3 cut(s) 71, 166, 701
BsuI GTATCC 1 cut(s) 362
BsuRI GGCC 3 cut(s) 5, 62, 1036
BtsCI GGATG 4 cut(s) 157, 214, 629, 933
BtsI GCAGTG 1 cut(s) 568
BtsIMutI CAGTG 1 cut(s) 568
Cac8I GCNNGC 2 cut(s) 963, 1068
CfoI GCGC 1 cut(s) 381
Cfr10I RCCGGY 2 cut(s) 679, 817
Cfr13I GGNCC 2 cut(s) 104, 117
Csp6I GTAC 1 cut(s) 1058
CspAI ACCGGT 1 cut(s) 817
CviAII CATG 3 cut(s) 383, 530, 962
CviQI GTAC 1 cut(s) 1058
DdeI CTNAG 4 cut(s) 361, 576, 631, 918
DpnI GATC 5 cut(s) 73, 168, 279, 703, 993
DpnII GATC 5 cut(s) 71, 166, 277, 701, 991
EaeI YGGCCR 1 cut(s) 60
EciI GGCGGA 2 cut(s) 84, 1077
Eco105I TACGTA 1 cut(s) 1097
Eco130I CCWWGG 3 cut(s) 51, 85, 937
Eco147I AGGCCT 1 cut(s) 1036
Eco24I GRGCYC 1 cut(s) 342
Eco31I GGTCTC 1 cut(s) 1015
Eco47I GGWCC 2 cut(s) 104, 117
EcoNI CCTNNNNNAGG 1 cut(s) 575
EcoRI GAATTC 1 cut(s) 494
EcoRII CCWGG 3 cut(s) 172, 760, 1005
EcoT14I CCWWGG 3 cut(s) 51, 85, 937
EcoT38I GRGCYC 1 cut(s) 342
ErhI CCWWGG 3 cut(s) 51, 85, 937
FaeI CATG 3 cut(s) 386, 533, 965
FatI CATG 3 cut(s) 382, 529, 961
FblI GTMKAC 2 cut(s) 142, 477
Fnu4HI GCNGC 6 cut(s) 45, 750, 780, 861, 864, 867
FokI GGATG 4 cut(s) 144, 201, 636, 920
FriOI GRGCYC 1 cut(s) 342
Fsp4HI GCNGC 6 cut(s) 45, 750, 780, 861, 864, 867
FspBI CTAG 4 cut(s) 137, 399, 699, 974
GlaI GCGC 1 cut(s) 380
GluI GCNGC 6 cut(s) 45, 750, 780, 861, 864, 867
GsuI CTGGAG 2 cut(s) 744, 862
HaeIII GGCC 3 cut(s) 5, 62, 1036
HapII CCGG 4 cut(s) 223, 680, 692, 818
HhaI GCGC 1 cut(s) 381
Hin1II CATG 3 cut(s) 386, 533, 965
Hin6I GCGC 1 cut(s) 379
HinP1I GCGC 1 cut(s) 379
HincII GTYRAC 3 cut(s) 143, 211, 478
HindII GTYRAC 3 cut(s) 143, 211, 478
HinfI GANTC 6 cut(s) 226, 244, 660, 836, 968, 998
HpaII CCGG 4 cut(s) 223, 680, 692, 818
HphI GGTGA 1 cut(s) 640
Hpy166II GTNNAC 3 cut(s) 143, 211, 478
Hpy188I TCNGA 4 cut(s) 198, 267, 277, 708
Hpy188III TCNNGA 6 cut(s) 80, 223, 230, 373, 657, 995
Hpy8I GTNNAC 3 cut(s) 143, 211, 478
Hpy99I CGWCG 1 cut(s) 117
HpyAV CCTTC 7 cut(s) 365, 484, 626, 796, 921, 1018, 1066
HpyCH4IV ACGT 2 cut(s) 319, 1096
HpyCH4V TGCA 2 cut(s) 788, 961
HpyF10VI GCNNNNNNNGC 6 cut(s) 41, 53, 385, 749, 785, 866
HpyF3I CTNAG 4 cut(s) 361, 576, 631, 918
HpySE526I ACGT 2 cut(s) 319, 1096
Hsp92II CATG 3 cut(s) 386, 533, 965
HspAI GCGC 1 cut(s) 379
Kpn2I TCCGGA 1 cut(s) 222
Kzo9I GATC 5 cut(s) 71, 166, 277, 701, 991
LmnI GCTCC 5 cut(s) 82, 328, 337, 673, 688
Lsp1109I GCAGC 3 cut(s) 766, 875, 878
LweI GCATC 3 cut(s) 166, 366, 501
MaeI CTAG 4 cut(s) 137, 399, 699, 974
MaeII ACGT 2 cut(s) 319, 1096
MaeIII GTNAC 3 cut(s) 28, 646, 1081
MalI GATC 5 cut(s) 73, 168, 279, 703, 993
MboI GATC 5 cut(s) 71, 166, 277, 701, 991
MboII GAAGA 6 cut(s) 440, 811, 820, 823, 1030, 1033
MflI RGATCY 3 cut(s) 71, 166, 701
MhlI GDGCHC 2 cut(s) 325, 342
MluCI AATT 6 cut(s) 390, 494, 599, 709, 822, 853
MlyI GAGTC 2 cut(s) 845, 992
MroI TCCGGA 1 cut(s) 222
MroXI GAANNNNTTC 2 cut(s) 494, 615
MseI TTAA 3 cut(s) 149, 294, 1050
MspCI CTTAAG 1 cut(s) 293
MspI CCGG 4 cut(s) 223, 680, 692, 818
MspR9I CCNGG 4 cut(s) 174, 692, 762, 1007
MvaI CCWGG 3 cut(s) 174, 762, 1007
MwoI GCNNNNNNNGC 6 cut(s) 41, 53, 385, 749, 785, 866
NciI CCSGG 1 cut(s) 692
NdeII GATC 5 cut(s) 71, 166, 277, 701, 991
NlaIII CATG 3 cut(s) 386, 533, 965
NlaIV GGNNCC 4 cut(s) 168, 339, 684, 951
NmeAIII GCCGAG 1 cut(s) 391
NmuCI GTSAC 2 cut(s) 28, 646
NspI RCATGY 1 cut(s) 965
PaeI GCATGC 1 cut(s) 965
PceI AGGCCT 1 cut(s) 1036
PdmI GAANNNNTTC 2 cut(s) 494, 615
PfeI GAWTC 4 cut(s) 226, 244, 660, 968
PinAI ACCGGT 1 cut(s) 817
PkrI GCNGC 6 cut(s) 46, 751, 781, 862, 865, 868
PleI GAGTC 2 cut(s) 844, 992
PpsI GAGTC 2 cut(s) 844, 992
Ppu21I YACGTR 1 cut(s) 1097
Psp6I CCWGG 3 cut(s) 172, 760, 1005
PspGI CCWGG 3 cut(s) 172, 760, 1005
PspN4I GGNNCC 4 cut(s) 168, 339, 684, 951
PspPI GGNCC 2 cut(s) 104, 117
PsuI RGATCY 3 cut(s) 71, 166, 701
RsaI GTAC 1 cut(s) 1059
RsaNI GTAC 1 cut(s) 1058
SalI GTCGAC 2 cut(s) 141, 476
SaqAI TTAA 3 cut(s) 149, 294, 1050
SatI GCNGC 6 cut(s) 45, 750, 780, 861, 864, 867
Sau3AI GATC 5 cut(s) 71, 166, 277, 701, 991
Sau96I GGNCC 2 cut(s) 104, 117
SchI GAGTC 2 cut(s) 845, 992
ScrFI CCNGG 4 cut(s) 174, 692, 762, 1007
SduI GDGCHC 2 cut(s) 325, 342
SfaNI GCATC 3 cut(s) 166, 366, 501
SinI GGWCC 2 cut(s) 104, 117
SmlI CTYRAG 2 cut(s) 293, 443
SmoI CTYRAG 2 cut(s) 293, 443
SnaBI TACGTA 1 cut(s) 1097
SphI GCATGC 1 cut(s) 965
Sse9I AATT 6 cut(s) 390, 494, 599, 709, 822, 853
SseBI AGGCCT 1 cut(s) 1036
SsiI CCGC 5 cut(s) 45, 69, 749, 860, 1088
SspMI CTAG 4 cut(s) 137, 399, 699, 974
StuI AGGCCT 1 cut(s) 1036
StyD4I CCNGG 4 cut(s) 172, 690, 760, 1005
StyI CCWWGG 3 cut(s) 51, 85, 937
TaiI ACGT 2 cut(s) 322, 1099
TaqI TCGA 3 cut(s) 142, 477, 539
TaqII GACCGA 1 cut(s) 105
TasI AATT 6 cut(s) 390, 494, 599, 709, 822, 853
TauI GCSGC 3 cut(s) 47, 752, 863
TfiI GAWTC 4 cut(s) 226, 244, 660, 968
Tru1I TTAA 3 cut(s) 149, 294, 1050
Tru9I TTAA 3 cut(s) 149, 294, 1050
TscAI CASTG 1 cut(s) 568
TseFI GTSAC 2 cut(s) 28, 646
TseI GCWGC 3 cut(s) 779, 863, 866
Tsp45I GTSAC 2 cut(s) 28, 646
TspDTI ATGAA 3 cut(s) 169, 182, 624
TspGWI ACGGA 1 cut(s) 101
TspRI CASTG 1 cut(s) 568
Vha464I CTTAAG 1 cut(s) 293
VpaK11BI GGWCC 2 cut(s) 104, 117
XagI CCTNNNNNAGG 1 cut(s) 575
XapI RAATTY 5 cut(s) 390, 494, 599, 709, 853
XceI RCATGY 1 cut(s) 965
XmiI GTMKAC 2 cut(s) 142, 477
XmnI GAANNNNTTC 2 cut(s) 494, 615
XspI CTAG 4 cut(s) 137, 399, 699, 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.